MD15G1199300.v1.1

mitogen-activated protein kinase kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
15861943 .. 15865485
3543 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1199300.v1.1.491

Sequence Viewer

Length: 1083 bp
ATGAAGACTAAGACGCCATTGAATTTGAACTTGAAGCAGCTGAAGCTCAATGTCCCAGCTCAAGAAGCCAACATCAAGTCCTTTCTGACTGCCAGTGGCACATTTCATGACGGCGATCTGCTTCTGAACCAGAAGGGATTGCGGCTTATATCTGAAGAGAAGGAGACCCCAGATCAATCTTCTGACAGTAAGGAGCTCAACTTTGAAATTACATTGGAAGACCTTGAGACTATCAAAATTATCGGGAAGGGAAGTGGTGGTGTAGTACAACTTGTTCGTCATAAATGGGTCGGAACACTATTCGCCTTGAAGGTGATCCAGATGAACATACAAGAGGAAATTCGTAAACAGATTGTGCAGGAGCTAAAAATAAACCAAGCAGCACAATGTCCACATGTGGTGGTTTGTCACCACTCATTCTATCACAATGGGGCCATTTCTCTTGTGTTAGAATACATGAATCGGGGATCTCTTGCAGATGTGATCGGACAAGTTAATACAATTCTTGAACCATATCTTGCAGTCGTTTGTAAACAGGTTTTACAAGGTCTTGTCTATCTGCATAACAAAAGGCATGTAATACATAGAGACATAAAACCGTCCAACCTGCTTGTAAACCATGAAGGGCAGGTAAAGATTACTGATTTCGGTGTGAGTGCTTCACTAGCTAGCTCTATGGGTCTAAGAGACACATTTGTTGGTACTTACAATTACATGTCGCCGGAGCGAATTAGCGGGAGTACTTATGACTATAGCTGTGATATTTGGAGTTTAGGTTTGGTGGTACTGGAGTGTGCTATCGGGAGGTTTCCTTACATGCAATCTGAAGATCAACAAAGCTGGCCAAGCTTTTATGAGCTTTTGGAGGCAATTGTGGAAAGTCCACCACCTTCAGCTCCTCCGGATCAGTTCTCCCCCGAGTTCTGTTCTTTTGTGTCTGCCTGCATACAGAAGGATCCTCAACACAGATCATCATGTTTGGACCTTTTGAGTCACCCGTTCATCAAGAAGTTCGAAGACAAAGACATTGATCTCGAGATTCTGGTTGGCAGCTTAGAACCTCCTGTAAATTTTCCTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0000187 GO:0000280 GO:0000910 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004708 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007049 GO:0007112 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007346 GO:0008150 GO:0008152 GO:0009524 GO:0009653 GO:0009791 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010200 GO:0010243 GO:0010311 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032504 GO:0033206 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045859 GO:0045860 GO:0045937 GO:0048232 GO:0048285 GO:0048364 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048583 GO:0048584 GO:0048609 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051301 GO:0051321 GO:0051338 GO:0051347 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0061640 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0071900 GO:0071902 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140013 GO:0140096 GO:1901564 GO:1901698 GO:1901700 GO:1902531 GO:1902533 GO:1903046 GO:1905392 GO:1905393
Pfam Domains
Protein Families

Protein Analysis

361

Amino Acids

40.39

Weight (kDa)

5.75

Isoelectric Point (pI)

55.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 76 - 335 8.3e-67 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 76 - 329 1.3e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012782)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 615, 619
AccIII TCCGGA 1 cut(s) 901
AciI CCGC 2 cut(s) 142, 735
AclWI GGATC 5 cut(s) 310, 475, 912, 950, 963
AcoI YGGCCR 1 cut(s) 842
AcsI RAATTY 3 cut(s) 22, 339, 1069
AcuI CTGAAG 4 cut(s) 62, 174, 846, 876
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 4 cut(s) 267, 703, 742, 786
AflIII ACRYGT 2 cut(s) 394, 714
AgsI TTSAA 6 cut(s) 22, 28, 34, 206, 310, 509
Alw21I GWGCWC 1 cut(s) 198
Alw26I GTCTC 4 cut(s) 158, 221, 582, 681
AlwI GGATC 5 cut(s) 310, 475, 912, 950, 963
Ama87I CYCGRG 2 cut(s) 917, 1034
Aor13HI TCCGGA 1 cut(s) 901
AoxI GGCC 2 cut(s) 432, 842
ApeKI GCWGC 3 cut(s) 37, 380, 1050
ApoI RAATTY 3 cut(s) 22, 339, 1069
AspS9I GGNCC 2 cut(s) 432, 982
AsuHPI GGTGA 3 cut(s) 325, 401, 986
AsuII TTCGAA 1 cut(s) 1014
AsuNHI GCTAGC 1 cut(s) 668
AvaI CYCGRG 2 cut(s) 917, 1034
AvaII GGWCC 1 cut(s) 982
BaeI ACNNNNGTAYC 2 cut(s) 776, 809
BalI TGGCCA 1 cut(s) 844
BamHI GGATCC 1 cut(s) 955
BanII GRGCYC 1 cut(s) 198
BbsI GAAGAC 3 cut(s) 11, 225, 1023
Bbv12I GWGCWC 1 cut(s) 198
BbvI GCAGC 3 cut(s) 49, 392, 1062
BceAI ACGGC 1 cut(s) 127
BcoDI GTCTC 4 cut(s) 158, 221, 582, 681
BfaI CTAG 3 cut(s) 665, 669, 1077
BfmI CTRYAG 1 cut(s) 751
BfuAI ACCTGC 2 cut(s) 615, 619
BisI GCNGC 4 cut(s) 38, 143, 381, 1051
BlsI GCNGC 4 cut(s) 39, 144, 382, 1052
BmcAI AGTACT 1 cut(s) 742
Bme18I GGWCC 1 cut(s) 982
BmeT110I CYCGRG 2 cut(s) 917, 1034
BmgT120I GGNCC 2 cut(s) 432, 982
BmiI GGNNCC 2 cut(s) 433, 957
BmtI GCTAGC 1 cut(s) 672
BpiI GAAGAC 3 cut(s) 11, 225, 1023
BpmI CTGGAG 1 cut(s) 809
Bpu14I TTCGAA 1 cut(s) 1014
BpuEI CTTGAG 2 cut(s) 45, 245
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 1 cut(s) 158
BsaWI WCCGGW 1 cut(s) 901
BsaXI ACNNNNNCTCC 2 cut(s) 760, 790
Bse1I ACTGG 2 cut(s) 93, 792
BseAI TCCGGA 1 cut(s) 901
BseNI ACTGG 2 cut(s) 93, 792
BseRI GAGGAG 1 cut(s) 888
BseXI GCAGC 3 cut(s) 49, 392, 1062
BseYI CCCAGC 1 cut(s) 55
BsgI GTGCAG 1 cut(s) 377
BshFI GGCC 2 cut(s) 434, 844
BsiHKAI GWGCWC 1 cut(s) 198
BsiHKCI CYCGRG 2 cut(s) 917, 1034
BsiSI CCGG 2 cut(s) 722, 902
BslFI GGGAC 1 cut(s) 38
BsmAI GTCTC 4 cut(s) 158, 221, 582, 681
BsmFI GGGAC 1 cut(s) 38
BsnI GGCC 2 cut(s) 434, 844
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 2 cut(s) 917, 1034
Bsp119I TTCGAA 1 cut(s) 1014
Bsp1286I GDGCHC 1 cut(s) 198
Bsp13I TCCGGA 1 cut(s) 901
BspACI CCGC 2 cut(s) 142, 735
BspANI GGCC 2 cut(s) 434, 844
BspEI TCCGGA 1 cut(s) 901
BspHI TCATGA 1 cut(s) 106
BspLI GGNNCC 2 cut(s) 433, 957
BspMI ACCTGC 2 cut(s) 615, 619
BspOI GCTAGC 1 cut(s) 672
BspPI GGATC 5 cut(s) 310, 475, 912, 950, 963
BspT104I TTCGAA 1 cut(s) 1014
BspTNI GGTCTC 1 cut(s) 158
BsrI ACTGG 2 cut(s) 93, 792
BssNI GRCGYC 1 cut(s) 14
Bst4CI ACNGT 2 cut(s) 188, 600
Bst6I CTCTTC 1 cut(s) 150
BstACI GRCGYC 1 cut(s) 14
BstBI TTCGAA 1 cut(s) 1014
BstC8I GCNNGC 3 cut(s) 670, 842, 943
BstDEI CTNAG 3 cut(s) 9, 683, 1054
BstMAI GTCTC 4 cut(s) 158, 221, 582, 681
BstMWI GCNNNNNNNGC 4 cut(s) 43, 65, 665, 846
BstNSI RCATGY 4 cut(s) 398, 578, 718, 820
BstSFI CTRYAG 1 cut(s) 751
BstV1I GCAGC 3 cut(s) 49, 392, 1062
BstV2I GAAGAC 3 cut(s) 11, 225, 1023
BstX2I RGATCY 2 cut(s) 467, 955
BstYI RGATCY 2 cut(s) 467, 955
BsuRI GGCC 2 cut(s) 434, 844
BtsIMutI CAGTG 1 cut(s) 100
BveI ACCTGC 2 cut(s) 615, 619
Cac8I GCNNGC 3 cut(s) 670, 842, 943
CciI TCATGA 1 cut(s) 106
Cfr13I GGNCC 2 cut(s) 432, 982
CseI GACGC 1 cut(s) 22
Csp6I GTAC 4 cut(s) 266, 702, 741, 785
CviAII CATG 8 cut(s) 107, 395, 457, 575, 620, 715, 817, 975
CviQI GTAC 4 cut(s) 266, 702, 741, 785
DdeI CTNAG 3 cut(s) 9, 683, 1054
EaeI YGGCCR 1 cut(s) 842
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Ecl136II GAGCTC 1 cut(s) 196
Eco24I GRGCYC 1 cut(s) 198
Eco31I GGTCTC 1 cut(s) 158
Eco47I GGWCC 1 cut(s) 982
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 4 cut(s) 62, 174, 846, 876
Eco88I CYCGRG 2 cut(s) 917, 1034
EcoICRI GAGCTC 1 cut(s) 196
EcoT38I GRGCYC 1 cut(s) 198
FaeI CATG 8 cut(s) 110, 398, 460, 578, 623, 718, 820, 978
FaqI GGGAC 1 cut(s) 38
FatI CATG 8 cut(s) 106, 394, 456, 574, 619, 714, 816, 974
FauI CCCGC 1 cut(s) 728
Fnu4HI GCNGC 4 cut(s) 38, 143, 381, 1051
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 4 cut(s) 38, 143, 381, 1051
FspBI CTAG 3 cut(s) 665, 669, 1077
GluI GCNGC 4 cut(s) 38, 143, 381, 1051
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 1 cut(s) 809
HaeIII GGCC 2 cut(s) 434, 844
HapII CCGG 2 cut(s) 722, 902
HgaI GACGC 1 cut(s) 22
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 8 cut(s) 110, 398, 460, 578, 623, 718, 820, 978
HindIII AAGCTT 1 cut(s) 847
HinfI GANTC 3 cut(s) 460, 991, 1039
HpaII CCGG 2 cut(s) 722, 902
HphI GGTGA 3 cut(s) 325, 401, 986
Hpy166II GTNNAC 5 cut(s) 347, 392, 533, 616, 884
Hpy188I TCNGA 7 cut(s) 87, 126, 154, 184, 293, 488, 826
Hpy8I GTNNAC 5 cut(s) 347, 392, 533, 616, 884
HpyAV CCTTC 7 cut(s) 127, 154, 241, 304, 617, 900, 946
HpyCH4III ACNGT 2 cut(s) 188, 600
HpyCH4V TGCA 6 cut(s) 358, 476, 521, 562, 820, 945
HpyF10VI GCNNNNNNNGC 4 cut(s) 43, 65, 665, 846
HpyF3I CTNAG 3 cut(s) 9, 683, 1054
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 8 cut(s) 110, 398, 460, 578, 623, 718, 820, 978
Kpn2I TCCGGA 1 cut(s) 901
LmnI GCTCC 4 cut(s) 193, 361, 724, 901
Lsp1109I GCAGC 3 cut(s) 49, 392, 1062
MaeI CTAG 3 cut(s) 665, 669, 1077
MaeIII GTNAC 2 cut(s) 407, 992
MboII GAAGA 6 cut(s) 16, 167, 171, 230, 839, 1028
MfeI CAATTG 1 cut(s) 870
MflI RGATCY 2 cut(s) 467, 955
MhlI GDGCHC 1 cut(s) 198
MlsI TGGCCA 1 cut(s) 844
MluCI AATT 9 cut(s) 22, 207, 237, 339, 501, 709, 729, 870, 1069
MluNI TGGCCA 1 cut(s) 844
MlyI GAGTC 1 cut(s) 1000
MmeI TCCRAC 2 cut(s) 271, 627
MnlI CCTC 6 cut(s) 328, 798, 859, 909, 969, 1071
Mox20I TGGCCA 1 cut(s) 844
MroI TCCGGA 1 cut(s) 901
MscI TGGCCA 1 cut(s) 844
MseI TTAA 1 cut(s) 495
Msp20I TGGCCA 1 cut(s) 844
MspA1I CMGCKG 1 cut(s) 40
MspI CCGG 2 cut(s) 722, 902
MunI CAATTG 1 cut(s) 870
MwoI GCNNNNNNNGC 4 cut(s) 43, 65, 665, 846
NheI GCTAGC 1 cut(s) 668
NlaIII CATG 8 cut(s) 110, 398, 460, 578, 623, 718, 820, 978
NlaIV GGNNCC 2 cut(s) 433, 957
NmuCI GTSAC 2 cut(s) 407, 992
NspI RCATGY 4 cut(s) 398, 578, 718, 820
NspV TTCGAA 1 cut(s) 1014
PaeR7I CTCGAG 1 cut(s) 1034
PagI TCATGA 1 cut(s) 106
PciI ACATGT 2 cut(s) 394, 714
PfeI GAWTC 2 cut(s) 460, 1039
PkrI GCNGC 4 cut(s) 39, 144, 382, 1052
PleI GAGTC 1 cut(s) 999
PpsI GAGTC 1 cut(s) 999
PscI ACATGT 2 cut(s) 394, 714
Psp124BI GAGCTC 1 cut(s) 198
PspFI CCCAGC 1 cut(s) 55
PspN4I GGNNCC 2 cut(s) 433, 957
PspPI GGNCC 2 cut(s) 432, 982
PsrI GAACNNNNNNTAC 2 cut(s) 258, 290
PsuI RGATCY 2 cut(s) 467, 955
PvuII CAGCTG 1 cut(s) 40
RsaI GTAC 4 cut(s) 267, 703, 742, 786
RsaNI GTAC 4 cut(s) 266, 702, 741, 785
SacI GAGCTC 1 cut(s) 198
SaqAI TTAA 1 cut(s) 495
SatI GCNGC 4 cut(s) 38, 143, 381, 1051
Sau96I GGNCC 2 cut(s) 432, 982
ScaI AGTACT 1 cut(s) 742
SchI GAGTC 1 cut(s) 1000
SduI GDGCHC 1 cut(s) 198
SfcI CTRYAG 1 cut(s) 751
Sfr274I CTCGAG 1 cut(s) 1034
SfuI TTCGAA 1 cut(s) 1014
SinI GGWCC 1 cut(s) 982
SlaI CTCGAG 1 cut(s) 1034
SmlI CTYRAG 3 cut(s) 60, 224, 1034
SmoI CTYRAG 3 cut(s) 60, 224, 1034
Sse9I AATT 9 cut(s) 22, 207, 237, 339, 501, 709, 729, 870, 1069
SsiI CCGC 2 cut(s) 142, 735
SspMI CTAG 3 cut(s) 665, 669, 1077
SstI GAGCTC 1 cut(s) 198
TaaI ACNGT 2 cut(s) 188, 600
TaqI TCGA 2 cut(s) 1014, 1035
TasI AATT 9 cut(s) 22, 207, 237, 339, 501, 709, 729, 870, 1069
TatI WGTACW 2 cut(s) 265, 740
TauI GCSGC 1 cut(s) 145
TfiI GAWTC 2 cut(s) 460, 1039
Tru1I TTAA 1 cut(s) 495
Tru9I TTAA 1 cut(s) 495
TscAI CASTG 1 cut(s) 100
TseFI GTSAC 2 cut(s) 407, 992
TseI GCWGC 3 cut(s) 37, 380, 1050
Tsp45I GTSAC 2 cut(s) 407, 992
TspDTI ATGAA 6 cut(s) 17, 95, 338, 473, 636, 991
TspRI CASTG 1 cut(s) 100
VpaK11BI GGWCC 1 cut(s) 982
XapI RAATTY 3 cut(s) 22, 339, 1069
XceI RCATGY 4 cut(s) 398, 578, 718, 820
XhoI CTCGAG 1 cut(s) 1034
XspI CTAG 3 cut(s) 665, 669, 1077
ZrmI AGTACT 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.