MD15G1311400.v1.1

nucleobase-ascorbate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0010966
Physical Location & Seq
Reverse (-)
31401849 .. 31408398
6550 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1311400.v1.1.491

Sequence Viewer

Length: 2241 bp
ATGGATCCTGGGTCGGGCTCCGAATCAATGGCCAAGGCCGAGAGGGGGAGGGGTCCGAGGGGTGGAGCTGCAATCGGCTCTGTTGAACCCAAGATCTCGGCTTTTGTGCCGAGGAGGGATCACAGTCCGAGAGAGCTGAAATCCTGGGCCAAAAGAACCGGATTCGTCTCTACTTTCTCAGGGGAGACGGCTGCTAGTGGCAGTGAGAGGAATGATAGTGCTGGGTTCGGTTTGGGCAGGGGTGTTGATAGGAGGCGGGGCGGCGGGTCCTCTCCGAAAATCGAGATCGACCCGGTTCTGGGTCGCACTAAACCGAGTAAAGGGGTTGAGATTGAGCCGGATGCCGGGGCTGGACATGGAGGGGTGAGGAGTGAGGGTGATGAAGCAGTGAGGGCTGAGGGTAAGAGGAGGATTGGGAATGTGCCTGTTTTGGGCGCTTCAGATGGTGGGAATGCAAATAGGAATGGGGATGGGAATGGGGGTGGGAATGTGAGTGGGAATGTGCATGGAGTCCCAGCAGTTGCTTCGGCGGTGGAGCCGAAGATAATTGATGGGAGAGATGAAAGAGATGTGGAAATGAATTTGTATGCAGATGGGGAAGAACCTCTTGATGGAGGGTGGCAGAGACAGTCTTCAATGAAGCTTGGCTTGAGAGAAAATCCGGGGATTGTCCCACTATTGTATTATGGTCTGCAGCACTATTTATCACTGGCTGGCTCACTTATATTCATCCCCCTGATCATGGTACCGGCCATGGGTGGAACAGATGATACTGCCACGGTTATTTCAACAGTGCTGCTGGTTTCTGGCATTACAACAATACTACACTCTTACTTTGGAACCCGACTTCCGTTAGTTCAAGGAAGTTCATTTGTATACTTGGCACCGGCCTTAGTTATCATTAATGCTCAGGAATATCGAAATCTTACAGAGCATAAATTTAGGCATATAATGAGAGAACTGCAAGGAGCTGTCATTGTTGGTTCGATATTTCAAAGCCTCCTGGGATTTAGTGGTTTAATGTCCTTTCTGCTGAGATTGATAAATCCCATTGTCGTTGCACCAACAGTTGCCGCAGTAGGTTTAGCGTTTTTTAGCTATGGCTTTCCTCAAGCTGGTAGTTGTGTGGAAATCAGTGTTCCACTGATACTTTTGGTTCTCACATTCACCCTGTACCTTCGAGGGGTATCCATCTTTGGGAATCGCTTTTTTCAGATTTATGCGGTTCCATTGAGTGTTATGATCATCTGGACTTATGCATTCTTTTTGACAGCCGGTGGAGCATATGATTACAAGGGCTGCAGTGCTGATGTACCTAGTTCAAATATCTTAATAGATGCTTGCAGAAAGCATGCATATACAATGAGACATTGCAGGACCGATGTTTCGAATGCATTGAGAACTGCTGCATGGGTTCGGATTCCCTACCCTTTACAGTGGGGTATTCCTATCTTCCATTTCAGGACTTCTATTATCCTGATCTTTGTGTCGCTTGTTGCATCAGTTGATTCGGTTGGAACATACCACACTACATCTGTGCGAATTAATTTGAAGCCTCCAACCCCAGGAATTGTCAGCAGAGGAATTGCACTGGAGGGTTTTTGCAGTATATTAGCTGGAGTTTGGGGTTCAGGTACTGGGTCAACAACATTGACAGAAAATATGCATACGGTTGACATAACAAAGGTAGCAAGTCGCAGGGCCGTGGAACTTGGAGCAGTTCTCCTAATCTTCTTCTCATTTATAGGAAAAGTGGGTGCCATTCTTGCCTCTATACCACTATCCTTGGCTGCTTCCGTACTCTGCTTCACGTGGGCCCTTGTGGTGGCACTGGGTCTCTCAACTTTGCAGTATAGTCGAGCAGCAAGTTTAAGAAACATAATGATTGTTGGTGTTTCCTTATTCCTTGGTTTCTCTATCCCAGCATATTTTCAACAATACCAACCCGAAACCAGCCTCATTCTGCCTAGCTATTTTGTTCCCTATGCTGCAGCATCTAATGGACCTGTCCACACCAACATTAAACAACTTGATTTTGCTATGAATGGACTTATGTCTTTGAACATGGTGGTGACGTTTCTGGTAGCATTTGTATTGGAAAACACTGTCCCAGGCAGCCGGCAAGAACGAGGGGTTTATTTATGGTCACGTCCAGAAGACATTTCGACGGATCCATCCTCGCTTGAAGATTATTCCTTGCCAAGAAAGCTTCCAGATATTTTTGCCAGGCGAAACGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Xan_ur_permease

Protein Analysis

747

Amino Acids

80.04

Weight (kDa)

9.02

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xan_ur_permease PF00860 226 - 644 2.1e-64 Permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 745
AccB1I GGYRCC 3 cut(s) 745, 883, 1757
AccI GTMKAC 1 cut(s) 876
AciI CCGC 6 cut(s) 256, 261, 264, 530, 1074, 1223
AclWI GGATC 4 cut(s) 12, 126, 2165, 2178
AcoI YGGCCR 2 cut(s) 30, 750
AcsI RAATTY 2 cut(s) 580, 938
AcuI CTGAAG 1 cut(s) 423
AcvI CACGTG 1 cut(s) 1812
AfaI GTAC 5 cut(s) 747, 1175, 1314, 1636, 1800
AjiI CACGTC 1 cut(s) 2150
AjnI CCWGG 6 cut(s) 7, 143, 1002, 1564, 2110, 2225
AloI GAACNNNNNNTCC 2 cut(s) 832, 864
AluBI AGCT 9 cut(s) 68, 136, 643, 971, 1098, 1115, 1616, 1971, 2209
AluI AGCT 9 cut(s) 68, 136, 643, 971, 1098, 1115, 1616, 1971, 2209
Alw26I GTCTC 5 cut(s) 172, 179, 619, 1360, 1841
AlwI GGATC 4 cut(s) 12, 126, 2165, 2178
AlwNI CAGNNNCTG 1 cut(s) 1637
AoxI GGCC 7 cut(s) 30, 36, 147, 750, 888, 1701, 1815
ApaI GGGCCC 1 cut(s) 1819
ApoI RAATTY 2 cut(s) 580, 938
ArsI GACNNNNNNTTYG 2 cut(s) 1369, 1401
AseI ATTAAT 2 cut(s) 903, 1545
Asp718I GGTACC 1 cut(s) 745
AspLEI GCGC 1 cut(s) 437
AspS9I GGNCC 8 cut(s) 53, 147, 267, 1377, 1701, 1815, 1816, 2003
AsuC2I CCSGG 3 cut(s) 293, 346, 663
AsuHPI GGTGA 4 cut(s) 376, 389, 1159, 2083
AsuII TTCGAA 1 cut(s) 1388
AvaII GGWCC 4 cut(s) 53, 267, 1377, 2003
BaeGI GKGCMC 1 cut(s) 1819
BalI TGGCCA 1 cut(s) 32
BamHI GGATCC 2 cut(s) 4, 2170
BanI GGYRCC 3 cut(s) 745, 883, 1757
BanII GRGCYC 2 cut(s) 20, 1819
BbrPI CACGTG 1 cut(s) 1812
BbsI GAAGAC 2 cut(s) 624, 2163
BbvCI CCTCAGC 1 cut(s) 396
BccI CCATC 7 cut(s) 437, 464, 545, 587, 605, 1199, 2182
BceAI ACGGC 2 cut(s) 204, 1688
BcgI CGANNNNNNTGC 4 cut(s) 507, 541, 1838, 1872
BciT130I CCWGG 6 cut(s) 9, 145, 1004, 1566, 2112, 2227
BciVI GTATCC 1 cut(s) 1198
BclI TGATCA 2 cut(s) 738, 1242
BcnI CCSGG 3 cut(s) 293, 346, 663
BcoDI GTCTC 5 cut(s) 172, 179, 619, 1360, 1841
BfaI CTAG 4 cut(s) 195, 1317, 1968, 2239
BfmI CTRYAG 3 cut(s) 692, 1300, 1989
BfoI RGCGCY 1 cut(s) 438
BfuI GTATCC 1 cut(s) 1198
BglII AGATCT 1 cut(s) 93
Bme1390I CCNGG 9 cut(s) 9, 145, 293, 346, 663, 1004, 1566, 2112, 2227
Bme18I GGWCC 4 cut(s) 53, 267, 1377, 2003
BmgBI CACGTC 1 cut(s) 2150
BmgT120I GGNCC 8 cut(s) 53, 147, 267, 1377, 1701, 1815, 1816, 2003
BmrFI CCNGG 9 cut(s) 9, 145, 293, 346, 663, 1004, 1566, 2112, 2227
BmrI ACTGGG 2 cut(s) 1647, 1841
BmsI GCATC 4 cut(s) 331, 1327, 1508, 2003
BmuI ACTGGG 2 cut(s) 1647, 1841
BoxI GACNNNNGTC 1 cut(s) 2053
BpiI GAAGAC 2 cut(s) 624, 2163
BplI GAGNNNNNCTC 2 cut(s) 1707, 1739
BpmI CTGGAG 2 cut(s) 1613, 1638
Bpu10I CCTNAGC 2 cut(s) 396, 909
Bpu14I TTCGAA 1 cut(s) 1388
BpuEI CTTGAG 2 cut(s) 670, 1095
BpuMI CCSGG 3 cut(s) 293, 346, 663
BsaAI YACGTR 1 cut(s) 1812
BsaI GGTCTC 1 cut(s) 1841
BsaWI WCCGGW 1 cut(s) 158
BsaXI ACNNNNNCTCC 2 cut(s) 361, 391
Bse118I RCCGGY 4 cut(s) 748, 886, 1274, 2118
Bse1I ACTGG 4 cut(s) 714, 1596, 1642, 1836
Bse3DI GCAATG 1 cut(s) 1369
BseBI CCWGG 6 cut(s) 9, 145, 1004, 1566, 2112, 2227
BseGI GGATG 4 cut(s) 346, 475, 729, 2174
BseMI GCAATG 1 cut(s) 1369
BseMII CTCAG 4 cut(s) 192, 387, 923, 1025
BseNI ACTGG 4 cut(s) 714, 1596, 1642, 1836
BseRI GAGGAG 3 cut(s) 127, 382, 421
BseSI GKGCMC 1 cut(s) 1819
BseYI CCCAGC 3 cut(s) 221, 514, 1921
BshFI GGCC 7 cut(s) 32, 38, 149, 752, 890, 1703, 1817
BshNI GGYRCC 3 cut(s) 745, 883, 1757
BsiSI CCGG 9 cut(s) 159, 293, 338, 345, 662, 749, 887, 1275, 2119
BslFI GGGAC 3 cut(s) 497, 656, 2093
BsmAI GTCTC 5 cut(s) 172, 179, 619, 1360, 1841
BsmBI CGTCTC 2 cut(s) 172, 179
BsmFI GGGAC 3 cut(s) 497, 656, 2093
BsmI GAATGC 3 cut(s) 457, 1259, 1396
BsnI GGCC 7 cut(s) 32, 38, 149, 752, 890, 1703, 1817
Bso31I GGTCTC 1 cut(s) 1841
Bsp119I TTCGAA 1 cut(s) 1388
Bsp120I GGGCCC 1 cut(s) 1815
Bsp1286I GDGCHC 2 cut(s) 20, 1819
Bsp143I GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
Bsp19I CCATGG 1 cut(s) 753
BspACI CCGC 6 cut(s) 256, 261, 264, 530, 1074, 1223
BspANI GGCC 7 cut(s) 32, 38, 149, 752, 890, 1703, 1817
BspCNI CTCAG 4 cut(s) 191, 388, 922, 1026
BspMAI CTGCAG 3 cut(s) 696, 1304, 1993
BspPI GGATC 4 cut(s) 12, 126, 2165, 2178
BspT104I TTCGAA 1 cut(s) 1388
BspT107I GGYRCC 3 cut(s) 745, 883, 1757
BspTNI GGTCTC 1 cut(s) 1841
BsrDI GCAATG 1 cut(s) 1369
BsrFI RCCGGY 4 cut(s) 748, 886, 1274, 2118
BsrI ACTGG 4 cut(s) 714, 1596, 1642, 1836
BssAI RCCGGY 4 cut(s) 748, 886, 1274, 2118
BssMI GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
BssNAI GTATAC 1 cut(s) 877
BssT1I CCWWGG 4 cut(s) 33, 753, 1785, 1906
Bst1107I GTATAC 1 cut(s) 877
Bst2UI CCWGG 6 cut(s) 9, 145, 1004, 1566, 2112, 2227
Bst4CI ACNGT 8 cut(s) 125, 630, 781, 793, 1069, 1437, 1672, 2107
BstBAI YACGTR 1 cut(s) 1812
BstBI TTCGAA 1 cut(s) 1388
BstC8I GCNNGC 4 cut(s) 715, 1342, 1353, 2120
BstDEI CTNAG 5 cut(s) 178, 396, 892, 909, 1034
BstDSI CCRYGG 3 cut(s) 753, 777, 1704
BstF5I GGATG 4 cut(s) 346, 475, 729, 2174
BstH2I RGCGCY 1 cut(s) 438
BstHHI GCGC 1 cut(s) 437
BstKTI GATC 8 cut(s) 7, 96, 121, 288, 741, 1245, 1482, 2173
BstMAI GTCTC 5 cut(s) 172, 179, 619, 1360, 1841
BstMBI GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
BstMWI GCNNNNNNNGC 4 cut(s) 392, 1280, 1766, 2206
BstNI CCWGG 6 cut(s) 9, 145, 1004, 1566, 2112, 2227
BstNSI RCATGY 1 cut(s) 1355
BstPAI GACNNNNGTC 1 cut(s) 2053
BstSCI CCNGG 9 cut(s) 7, 143, 291, 344, 661, 1002, 1564, 2110, 2225
BstSFI CTRYAG 3 cut(s) 692, 1300, 1989
BstSLI GKGCMC 1 cut(s) 1819
BstV2I GAAGAC 2 cut(s) 624, 2163
BstX2I RGATCY 3 cut(s) 4, 93, 2170
BstYI RGATCY 3 cut(s) 4, 93, 2170
BstZ17I GTATAC 1 cut(s) 877
BsuI GTATCC 1 cut(s) 1198
BsuRI GGCC 7 cut(s) 32, 38, 149, 752, 890, 1703, 1817
BtgI CCRYGG 3 cut(s) 753, 777, 1704
BtrI CACGTC 1 cut(s) 2150
BtsCI GGATG 4 cut(s) 346, 475, 729, 2174
BtsI GCAGTG 3 cut(s) 208, 393, 1309
Cac8I GCNNGC 4 cut(s) 715, 1342, 1353, 2120
CaiI CAGNNNCTG 1 cut(s) 1637
CfoI GCGC 1 cut(s) 437
Cfr10I RCCGGY 4 cut(s) 748, 886, 1274, 2118
Cfr13I GGNCC 8 cut(s) 53, 147, 267, 1377, 1701, 1815, 1816, 2003
Csp6I GTAC 5 cut(s) 746, 1174, 1313, 1635, 1799
CspCI CAANNNNNGTGG 2 cut(s) 1767, 1802
CviAII CATG 7 cut(s) 356, 506, 742, 754, 1352, 1410, 2065
CviQI GTAC 5 cut(s) 746, 1174, 1313, 1635, 1799
DdeI CTNAG 5 cut(s) 178, 396, 892, 909, 1034
DpnI GATC 8 cut(s) 6, 95, 120, 287, 740, 1244, 1481, 2172
DpnII GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
EaeI YGGCCR 2 cut(s) 30, 750
Eco130I CCWWGG 4 cut(s) 33, 753, 1785, 1906
Eco24I GRGCYC 2 cut(s) 20, 1819
Eco31I GGTCTC 1 cut(s) 1841
Eco47I GGWCC 4 cut(s) 53, 267, 1377, 2003
Eco57I CTGAAG 1 cut(s) 423
Eco72I CACGTG 1 cut(s) 1812
EcoO109I RGGNCCY 2 cut(s) 267, 1816
EcoRII CCWGG 6 cut(s) 7, 143, 1002, 1564, 2110, 2225
EcoT14I CCWWGG 4 cut(s) 33, 753, 1785, 1906
EcoT22I ATGCAT 4 cut(s) 1261, 1357, 1396, 1668
EcoT38I GRGCYC 2 cut(s) 20, 1819
ErhI CCWWGG 4 cut(s) 33, 753, 1785, 1906
Esp3I CGTCTC 2 cut(s) 172, 179
FaeI CATG 7 cut(s) 359, 509, 745, 757, 1355, 1413, 2068
FalI AAGNNNNNCTT 4 cut(s) 591, 623, 632, 664
FaqI GGGAC 3 cut(s) 497, 656, 2093
FatI CATG 7 cut(s) 355, 505, 741, 753, 1351, 1409, 2064
FauI CCCGC 2 cut(s) 249, 257
FauNDI CATATG 1 cut(s) 1285
FbaI TGATCA 2 cut(s) 738, 1242
FblI GTMKAC 1 cut(s) 876
FokI GGATG 4 cut(s) 353, 482, 716, 2161
FriOI GRGCYC 2 cut(s) 20, 1819
FspBI CTAG 4 cut(s) 195, 1317, 1968, 2239
GlaI GCGC 1 cut(s) 436
GsaI CCCAGC 3 cut(s) 225, 518, 1925
GsuI CTGGAG 2 cut(s) 1613, 1638
HaeII RGCGCY 1 cut(s) 438
HaeIII GGCC 7 cut(s) 32, 38, 149, 752, 890, 1703, 1817
HapII CCGG 9 cut(s) 159, 293, 338, 345, 662, 749, 887, 1275, 2119
HhaI GCGC 1 cut(s) 437
Hin1II CATG 7 cut(s) 359, 509, 745, 757, 1355, 1413, 2068
Hin6I GCGC 1 cut(s) 435
HinP1I GCGC 1 cut(s) 435
HincII GTYRAC 2 cut(s) 1644, 1675
HindII GTYRAC 2 cut(s) 1644, 1675
HindIII AAGCTT 2 cut(s) 641, 2207
HinfI GANTC 6 cut(s) 23, 162, 510, 1201, 1420, 1508
HpaII CCGG 9 cut(s) 159, 293, 338, 345, 662, 749, 887, 1275, 2119
HphI GGTGA 4 cut(s) 376, 389, 1159, 2083
Hpy166II GTNNAC 4 cut(s) 877, 1644, 1675, 2011
Hpy188I TCNGA 7 cut(s) 22, 57, 129, 276, 442, 1215, 1419
Hpy188III TCNNGA 8 cut(s) 283, 608, 911, 1249, 1462, 1477, 2153, 2213
Hpy8I GTNNAC 4 cut(s) 877, 1644, 1675, 2011
Hpy99I CGWCG 1 cut(s) 2170
HpyAV CCTTC 1 cut(s) 1187
HpyCH4III ACNGT 8 cut(s) 125, 630, 781, 793, 1069, 1437, 1672, 2107
HpyCH4IV ACGT 4 cut(s) 1811, 2075, 2149, 2235
HpyF10VI GCNNNNNNNGC 4 cut(s) 392, 1280, 1766, 2206
HpyF3I CTNAG 5 cut(s) 178, 396, 892, 909, 1034
HpySE526I ACGT 4 cut(s) 1811, 2075, 2149, 2235
Hsp92II CATG 7 cut(s) 359, 509, 745, 757, 1355, 1413, 2068
HspAI GCGC 1 cut(s) 435
KpnI GGTACC 1 cut(s) 749
KroI GCCGGC 1 cut(s) 2118
KroNI GCCGGC 1 cut(s) 2120
Ksp22I TGATCA 2 cut(s) 738, 1242
Kzo9I GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
LmnI GCTCC 6 cut(s) 23, 65, 535, 968, 1280, 1715
LweI GCATC 4 cut(s) 331, 1327, 1508, 2003
MaeI CTAG 4 cut(s) 195, 1317, 1968, 2239
MaeII ACGT 4 cut(s) 1811, 2075, 2149, 2235
MaeIII GTNAC 2 cut(s) 2071, 2145
MalI GATC 8 cut(s) 6, 95, 120, 287, 740, 1244, 1481, 2172
MboI GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
MboII GAAGA 8 cut(s) 553, 611, 624, 1444, 1723, 1726, 2168, 2198
MflI RGATCY 3 cut(s) 4, 93, 2170
MhlI GDGCHC 2 cut(s) 20, 1819
MlsI TGGCCA 1 cut(s) 32
MluCI AATT 7 cut(s) 546, 580, 938, 1542, 1546, 1569, 1584
MluNI TGGCCA 1 cut(s) 32
MlyI GAGTC 1 cut(s) 519
MmeI TCCRAC 2 cut(s) 1495, 1583
Mox20I TGGCCA 1 cut(s) 32
Mph1103I ATGCAT 4 cut(s) 1261, 1357, 1396, 1668
MroNI GCCGGC 1 cut(s) 2118
MscI TGGCCA 1 cut(s) 32
MseI TTAA 6 cut(s) 903, 1019, 1331, 1545, 1871, 2022
MslI CAYNNNNRTG 1 cut(s) 2069
Msp20I TGGCCA 1 cut(s) 32
MspI CCGG 9 cut(s) 159, 293, 338, 345, 662, 749, 887, 1275, 2119
MspR9I CCNGG 9 cut(s) 9, 145, 293, 346, 663, 1004, 1566, 2112, 2227
Mva1269I GAATGC 3 cut(s) 457, 1259, 1396
MvaI CCWGG 6 cut(s) 9, 145, 1004, 1566, 2112, 2227
MwoI GCNNNNNNNGC 4 cut(s) 392, 1280, 1766, 2206
NaeI GCCGGC 1 cut(s) 2120
NciI CCSGG 3 cut(s) 293, 346, 663
NcoI CCATGG 1 cut(s) 753
NdeI CATATG 1 cut(s) 1285
NdeII GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
NgoMIV GCCGGC 1 cut(s) 2118
NlaIII CATG 7 cut(s) 359, 509, 745, 757, 1355, 1413, 2068
NmeAIII GCCGAG 3 cut(s) 64, 77, 135
NmuCI GTSAC 2 cut(s) 2071, 2145
NsiI ATGCAT 4 cut(s) 1261, 1357, 1396, 1668
NspI RCATGY 1 cut(s) 1355
NspV TTCGAA 1 cut(s) 1388
PaeI GCATGC 1 cut(s) 1355
PctI GAATGC 3 cut(s) 457, 1259, 1396
PdiI GCCGGC 1 cut(s) 2120
PfeI GAWTC 5 cut(s) 23, 162, 1201, 1420, 1508
PleI GAGTC 1 cut(s) 518
PmaCI CACGTG 1 cut(s) 1812
PmlI CACGTG 1 cut(s) 1812
PpsI GAGTC 1 cut(s) 518
Ppu21I YACGTR 1 cut(s) 1812
PpuMI RGGWCCY 1 cut(s) 267
PshAI GACNNNNGTC 1 cut(s) 2053
PshBI ATTAAT 2 cut(s) 903, 1545
Psp5II RGGWCCY 1 cut(s) 267
Psp6I CCWGG 6 cut(s) 7, 143, 1002, 1564, 2110, 2225
PspCI CACGTG 1 cut(s) 1812
PspFI CCCAGC 3 cut(s) 221, 514, 1921
PspGI CCWGG 6 cut(s) 7, 143, 1002, 1564, 2110, 2225
PspOMI GGGCCC 1 cut(s) 1815
PspPI GGNCC 8 cut(s) 53, 147, 267, 1377, 1701, 1815, 1816, 2003
PspPPI RGGWCCY 1 cut(s) 267
PsrI GAACNNNNNNTAC 2 cut(s) 754, 786
PstI CTGCAG 3 cut(s) 696, 1304, 1993
PstNI CAGNNNCTG 1 cut(s) 1637
PsuI RGATCY 3 cut(s) 4, 93, 2170
RsaI GTAC 5 cut(s) 747, 1175, 1314, 1636, 1800
RsaNI GTAC 5 cut(s) 746, 1174, 1313, 1635, 1799
RseI CAYNNNNRTG 1 cut(s) 2069
SaqAI TTAA 6 cut(s) 903, 1019, 1331, 1545, 1871, 2022
Sau3AI GATC 8 cut(s) 4, 93, 118, 285, 738, 1242, 1479, 2170
Sau96I GGNCC 8 cut(s) 53, 147, 267, 1377, 1701, 1815, 1816, 2003
SchI GAGTC 1 cut(s) 519
ScrFI CCNGG 9 cut(s) 9, 145, 293, 346, 663, 1004, 1566, 2112, 2227
SduI GDGCHC 2 cut(s) 20, 1819
SfaNI GCATC 4 cut(s) 331, 1327, 1508, 2003
SfcI CTRYAG 3 cut(s) 692, 1300, 1989
SfuI TTCGAA 1 cut(s) 1388
SinI GGWCC 4 cut(s) 53, 267, 1377, 2003
SmiMI CAYNNNNRTG 1 cut(s) 2069
SmlI CTYRAG 2 cut(s) 649, 1110
SmoI CTYRAG 2 cut(s) 649, 1110
SphI GCATGC 1 cut(s) 1355
Sse9I AATT 7 cut(s) 546, 580, 938, 1542, 1546, 1569, 1584
SsiI CCGC 6 cut(s) 256, 261, 264, 530, 1074, 1223
SspMI CTAG 4 cut(s) 195, 1317, 1968, 2239
StyD4I CCNGG 9 cut(s) 7, 143, 291, 344, 661, 1002, 1564, 2110, 2225
StyI CCWWGG 4 cut(s) 33, 753, 1785, 1906
TaaI ACNGT 8 cut(s) 125, 630, 781, 793, 1069, 1437, 1672, 2107
TaiI ACGT 4 cut(s) 1814, 2078, 2152, 2238
TaqI TCGA 8 cut(s) 282, 288, 919, 986, 1180, 1388, 1858, 2165
TaqII GACCGA 1 cut(s) 1394
TasI AATT 7 cut(s) 546, 580, 938, 1542, 1546, 1569, 1584
TauI GCSGC 2 cut(s) 264, 1076
TfiI GAWTC 5 cut(s) 23, 162, 1201, 1420, 1508
Tru1I TTAA 6 cut(s) 903, 1019, 1331, 1545, 1871, 2022
Tru9I TTAA 6 cut(s) 903, 1019, 1331, 1545, 1871, 2022
TseFI GTSAC 2 cut(s) 2071, 2145
Tsp45I GTSAC 2 cut(s) 2071, 2145
TspDTI ATGAA 7 cut(s) 396, 576, 593, 653, 718, 858, 2057
TspGWI ACGGA 3 cut(s) 840, 1786, 2183
VpaK11BI GGWCC 4 cut(s) 53, 267, 1377, 2003
VspI ATTAAT 2 cut(s) 903, 1545
XapI RAATTY 2 cut(s) 580, 938
XceI RCATGY 1 cut(s) 1355
XmiI GTMKAC 1 cut(s) 876
XspI CTAG 4 cut(s) 195, 1317, 1968, 2239
Zsp2I ATGCAT 4 cut(s) 1261, 1357, 1396, 1668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.