Rmu_co8518493.1_g000001

nucleobase-ascorbate transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8518493.1
Physical Location & Seq
Reverse (-)
462 .. 5130
4669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8518493.1_g000001.1.cds

Sequence Viewer

Length: 1458 bp
atgctgctggtttctggtattacaacaatattgcactcttactttggaacccgacttccattagttcaaggaagttcatttgtgtatttggccccagcgttagttatcatgaatgctcaagaatatcggaatcttacagaacataaatttaggcatataatgagagaactgcaaggagctataattattggttcgatatttcaaagcatcctgggatttactggtttaatgtctttattgctgagattgataaaccctattgtcgttgcaccaactgttgctgcagtaggtttggccttttttagttatggctttcctcaagctggtagttgtgtggaaatcagcattccacagatacttttggttcttatgttcaccttgtaccttcgaggggtaaacatctttgggcatcgtcttttccggatttatgcggttcccttgagcataatgatcatatggacttatgcattctttttgacagccggtggagcatatgattacaaaggctgtacctctgatatacctagttcaaatatcttaatagatgcttgtagaagacatgcatataccatgcaacattgtaggaccgatgtttcaaatgcatggagaactgccgcatgggtcaggattccctaccctctgcagtggggtatccctatcttccatttcaggacttccattatcatggtctttgtatcacttgttgcatcagttgattcggttggaacatatcactctgcatctatgcaaattaatctgaaacctccaacccgaggaattgtcagcagaggaattgcattggagggattctgcagtatattggcaggactttggggttcaggtactgggtcaacaaccttgacagaaaatgttcatacaatcaacataacaaaggtggcaagtcgaagagttgtggaacttggagcagttttcttaatcgtcttctcattcataggaaaagtgggtgccattcttgcctctataccactggccttggctgcttccgtactctgcttcacatgggcccttgttgtggcattgggtctctcaacgttgcagtatagtcgagcagcaagttttagaaacatgatgatagttggtgtttcattgtttcttggtttatctattcctgcatattttcaacagtatcaaccagaaacgagcttcatactccctagctacttcattccatatgcagcagcatctaatggaccggcccgcaccgggagtaaacaacttgactttgctataaatgcacttatgtctttgaacatggtggtgacactcgtggtagcattggtactggaaaacactgtcccaggcagccgtcaggaacgaggggtgtatatatggtcaaaaccagaagacataaataccgatccatcttcacttgaagattattccttaccaagaaaagtttccagatgtctttgccgctctaattgtctgggcgtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

485

Amino Acids

53.14

Weight (kDa)

9.41

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 965
AccBSI CCGCTC 1 cut(s) 1437
AccIII TCCGGA 1 cut(s) 420
AciI CCGC 4 cut(s) 431, 615, 1219, 1435
AclI AACGTT 1 cut(s) 1052
AclWI GGATC 1 cut(s) 1373
AcsI RAATTY 1 cut(s) 146
AcyI GRCGYC 1 cut(s) 1452
AfaI GTAC 5 cut(s) 383, 511, 844, 1008, 1302
AfiI CCNNNNNNNGG 5 cut(s) 323, 391, 773, 1033, 1224
AgsI TTSAA 7 cut(s) 68, 203, 531, 597, 1142, 1270, 1394
AjnI CCWGG 2 cut(s) 210, 1318
AjuI GAANNNNNNNTTGG 2 cut(s) 1402, 1434
AloI GAACNNNNNNTCC 2 cut(s) 40, 72
AluBI AGCT 4 cut(s) 179, 323, 1164, 1179
AluI AGCT 4 cut(s) 179, 323, 1164, 1179
Alw26I GTCTC 1 cut(s) 1049
AlwI GGATC 1 cut(s) 1373
AlwNI CAGNNNCTG 1 cut(s) 845
Ama87I CYCGRG 1 cut(s) 771
Aor13HI TCCGGA 1 cut(s) 420
AoxI GGCC 5 cut(s) 90, 294, 990, 1023, 1215
ApaI GGGCCC 1 cut(s) 1027
ApeKI GCWGC 7 cut(s) 4, 281, 998, 1070, 1196, 1199, 1323
ApoI RAATTY 1 cut(s) 146
AseI ATTAAT 1 cut(s) 753
Asp700I GAANNNNTTC 2 cut(s) 870, 1417
AspS9I GGNCC 6 cut(s) 91, 585, 1023, 1024, 1211, 1216
AsuC2I CCSGG 1 cut(s) 1225
AsuHPI GGTGA 2 cut(s) 367, 1291
AvaI CYCGRG 1 cut(s) 771
AvaII GGWCC 2 cut(s) 585, 1211
BaeGI GKGCMC 1 cut(s) 1027
BanI GGYRCC 1 cut(s) 965
BanII GRGCYC 1 cut(s) 1027
BauI CACGAG 1 cut(s) 1286
BbsI GAAGAC 3 cut(s) 562, 934, 1371
BbvI GCAGC 6 cut(s) 268, 985, 1082, 1208, 1211, 1335
BccI CCATC 1 cut(s) 1390
BceAI ACGGC 1 cut(s) 1311
BcgI CGANNNNNNTGC 2 cut(s) 1046, 1080
BciT130I CCWGG 2 cut(s) 212, 1320
BciVI GTATCC 1 cut(s) 662
BclI TGATCA 1 cut(s) 450
BcnI CCSGG 1 cut(s) 1225
BcoDI GTCTC 1 cut(s) 1049
BfaI CTAG 2 cut(s) 525, 1176
BfmI CTRYAG 3 cut(s) 282, 641, 811
BfuI GTATCC 1 cut(s) 662
BisI GCNGC 9 cut(s) 5, 282, 615, 999, 1071, 1197, 1200, 1324, 1435
BlsI GCNGC 9 cut(s) 6, 283, 616, 1000, 1072, 1198, 1201, 1325, 1436
Bme1390I CCNGG 3 cut(s) 212, 1225, 1320
Bme18I GGWCC 2 cut(s) 585, 1211
BmeT110I CYCGRG 1 cut(s) 771
BmgT120I GGNCC 6 cut(s) 91, 585, 1023, 1024, 1211, 1216
BmiI GGNNCC 5 cut(s) 49, 93, 435, 967, 1025
BmrFI CCNGG 3 cut(s) 212, 1225, 1320
BmrI ACTGGG 1 cut(s) 855
BmsI GCATC 6 cut(s) 216, 418, 535, 716, 749, 1211
BmuI ACTGGG 1 cut(s) 855
BpiI GAAGAC 3 cut(s) 562, 934, 1371
BpuEI CTTGAG 3 cut(s) 102, 303, 460
BpuMI CCSGG 1 cut(s) 1225
BsaHI GRCGYC 1 cut(s) 1452
BsaI GGTCTC 1 cut(s) 1049
BsaJI CCNNGG 4 cut(s) 211, 772, 993, 1318
BsaWI WCCGGW 1 cut(s) 420
Bsc4I CCNNNNNNNGG 5 cut(s) 323, 391, 773, 1033, 1224
Bse118I RCCGGY 2 cut(s) 482, 1213
Bse1I ACTGG 4 cut(s) 226, 850, 993, 1308
BseAI TCCGGA 1 cut(s) 420
BseBI CCWGG 2 cut(s) 212, 1320
BseDI CCNNGG 4 cut(s) 211, 772, 993, 1318
BseGI GGATG 1 cut(s) 207
BseLI CCNNNNNNNGG 5 cut(s) 323, 391, 773, 1033, 1224
BseMII CTCAG 1 cut(s) 233
BseNI ACTGG 4 cut(s) 226, 850, 993, 1308
BseSI GKGCMC 1 cut(s) 1027
BseXI GCAGC 6 cut(s) 268, 985, 1082, 1208, 1211, 1335
BseYI CCCAGC 1 cut(s) 94
BshFI GGCC 5 cut(s) 92, 296, 992, 1025, 1217
BshNI GGYRCC 1 cut(s) 965
BsiHKCI CYCGRG 1 cut(s) 771
BsiSI CCGG 4 cut(s) 421, 483, 1214, 1224
BslFI GGGAC 1 cut(s) 1301
BslI CCNNNNNNNGG 5 cut(s) 323, 391, 773, 1033, 1224
BsmAI GTCTC 1 cut(s) 1049
BsmFI GGGAC 1 cut(s) 1301
BsmI GAATGC 3 cut(s) 118, 345, 467
BsnI GGCC 5 cut(s) 92, 296, 992, 1025, 1217
Bso31I GGTCTC 1 cut(s) 1049
BsoBI CYCGRG 1 cut(s) 771
Bsp120I GGGCCC 1 cut(s) 1023
Bsp1286I GDGCHC 1 cut(s) 1027
Bsp13I TCCGGA 1 cut(s) 420
Bsp143I GATC 2 cut(s) 450, 1378
BspACI CCGC 4 cut(s) 431, 615, 1219, 1435
BspANI GGCC 5 cut(s) 92, 296, 992, 1025, 1217
BspCNI CTCAG 1 cut(s) 234
BspEI TCCGGA 1 cut(s) 420
BspHI TCATGA 1 cut(s) 108
BspLI GGNNCC 5 cut(s) 49, 93, 435, 967, 1025
BspMAI CTGCAG 3 cut(s) 286, 645, 815
BspPI GGATC 1 cut(s) 1373
BspT107I GGYRCC 1 cut(s) 965
BspTNI GGTCTC 1 cut(s) 1049
BsrBI CCGCTC 1 cut(s) 1437
BsrFI RCCGGY 2 cut(s) 482, 1213
BsrI ACTGG 4 cut(s) 226, 850, 993, 1308
BssAI RCCGGY 2 cut(s) 482, 1213
BssECI CCNNGG 4 cut(s) 211, 772, 993, 1318
BssMI GATC 2 cut(s) 450, 1378
BssNI GRCGYC 1 cut(s) 1452
BssSI CACGAG 1 cut(s) 1286
BssT1I CCWWGG 1 cut(s) 993
Bst2BI CACGAG 1 cut(s) 1286
Bst2UI CCWGG 2 cut(s) 212, 1320
Bst4CI ACNGT 3 cut(s) 277, 1146, 1315
Bst6I CTCTTC 1 cut(s) 901
BstACI GRCGYC 1 cut(s) 1452
BstC8I GCNNGC 1 cut(s) 1219
BstDEI CTNAG 1 cut(s) 242
BstF5I GGATG 1 cut(s) 207
BstKTI GATC 2 cut(s) 453, 1381
BstMAI GTCTC 1 cut(s) 1049
BstMBI GATC 2 cut(s) 450, 1378
BstMWI GCNNNNNNNGC 4 cut(s) 488, 974, 998, 1253
BstNI CCWGG 2 cut(s) 212, 1320
BstNSI RCATGY 1 cut(s) 563
BstSCI CCNGG 3 cut(s) 210, 1223, 1318
BstSFI CTRYAG 3 cut(s) 282, 641, 811
BstSLI GKGCMC 1 cut(s) 1027
BstV1I GCAGC 6 cut(s) 268, 985, 1082, 1208, 1211, 1335
BstV2I GAAGAC 3 cut(s) 562, 934, 1371
BstXI CCANNNNNNTGG 1 cut(s) 685
BsuI GTATCC 1 cut(s) 662
BsuRI GGCC 5 cut(s) 92, 296, 992, 1025, 1217
BtsCI GGATG 1 cut(s) 207
BtsI GCAGTG 1 cut(s) 650
BtsIMutI CAGTG 3 cut(s) 650, 986, 1311
Cac8I GCNNGC 1 cut(s) 1219
CaiI CAGNNNCTG 1 cut(s) 845
CciI TCATGA 1 cut(s) 108
Cfr10I RCCGGY 2 cut(s) 482, 1213
Cfr13I GGNCC 6 cut(s) 91, 585, 1023, 1024, 1211, 1216
CseI GACGC 1 cut(s) 1441
Csp6I GTAC 5 cut(s) 382, 510, 843, 1007, 1301
CspCI CAANNNNNGTGG 2 cut(s) 975, 1010
CviAII CATG 9 cut(s) 109, 560, 571, 603, 618, 685, 1020, 1087, 1273
CviQI GTAC 5 cut(s) 382, 510, 843, 1007, 1301
DdeI CTNAG 1 cut(s) 242
DpnI GATC 2 cut(s) 452, 1380
DpnII GATC 2 cut(s) 450, 1378
Eam1104I CTCTTC 1 cut(s) 901
EarI CTCTTC 1 cut(s) 901
Eco130I CCWWGG 1 cut(s) 993
Eco24I GRGCYC 1 cut(s) 1027
Eco31I GGTCTC 1 cut(s) 1049
Eco47I GGWCC 2 cut(s) 585, 1211
Eco88I CYCGRG 1 cut(s) 771
EcoO109I RGGNCCY 1 cut(s) 1024
EcoRII CCWGG 2 cut(s) 210, 1318
EcoT14I CCWWGG 1 cut(s) 993
EcoT22I ATGCAT 3 cut(s) 469, 565, 604
EcoT38I GRGCYC 1 cut(s) 1027
ErhI CCWWGG 1 cut(s) 993
FaeI CATG 9 cut(s) 112, 563, 574, 606, 621, 688, 1023, 1090, 1276
FaqI GGGAC 1 cut(s) 1301
FatI CATG 9 cut(s) 108, 559, 570, 602, 617, 684, 1019, 1086, 1272
FauI CCCGC 1 cut(s) 1226
FauNDI CATATG 3 cut(s) 455, 493, 1192
FbaI TGATCA 1 cut(s) 450
Fnu4HI GCNGC 9 cut(s) 5, 282, 615, 999, 1071, 1197, 1200, 1324, 1435
FokI GGATG 1 cut(s) 194
FriOI GRGCYC 1 cut(s) 1027
Fsp4HI GCNGC 9 cut(s) 5, 282, 615, 999, 1071, 1197, 1200, 1324, 1435
FspBI CTAG 2 cut(s) 525, 1176
GluI GCNGC 9 cut(s) 5, 282, 615, 999, 1071, 1197, 1200, 1324, 1435
GsaI CCCAGC 1 cut(s) 98
HaeIII GGCC 5 cut(s) 92, 296, 992, 1025, 1217
HapII CCGG 4 cut(s) 421, 483, 1214, 1224
HgaI GACGC 1 cut(s) 1441
Hin1I GRCGYC 1 cut(s) 1452
Hin1II CATG 9 cut(s) 112, 563, 574, 606, 621, 688, 1023, 1090, 1276
HincII GTYRAC 1 cut(s) 852
HindII GTYRAC 1 cut(s) 852
HinfI GANTC 4 cut(s) 130, 628, 716, 807
HpaII CCGG 4 cut(s) 421, 483, 1214, 1224
HphI GGTGA 2 cut(s) 367, 1291
Hpy166II GTNNAC 4 cut(s) 375, 397, 852, 1232
Hpy188I TCNGA 4 cut(s) 129, 517, 759, 1457
Hpy188III TCNNGA 7 cut(s) 109, 119, 421, 625, 670, 1331, 1422
Hpy8I GTNNAC 4 cut(s) 375, 397, 852, 1232
HpyAV CCTTC 1 cut(s) 395
HpyCH4III ACNGT 3 cut(s) 277, 1146, 1315
HpyCH4IV ACGT 1 cut(s) 1052
HpyF10VI GCNNNNNNNGC 4 cut(s) 488, 974, 998, 1253
HpyF3I CTNAG 1 cut(s) 242
HpySE526I ACGT 1 cut(s) 1052
Hsp92I GRCGYC 1 cut(s) 1452
Hsp92II CATG 9 cut(s) 112, 563, 574, 606, 621, 688, 1023, 1090, 1276
Kpn2I TCCGGA 1 cut(s) 420
Ksp22I TGATCA 1 cut(s) 450
Kzo9I GATC 2 cut(s) 450, 1378
LmnI GCTCC 3 cut(s) 176, 488, 923
Lsp1109I GCAGC 6 cut(s) 268, 985, 1082, 1208, 1211, 1335
LweI GCATC 6 cut(s) 216, 418, 535, 716, 749, 1211
MaeI CTAG 2 cut(s) 525, 1176
MaeII ACGT 1 cut(s) 1052
MaeIII GTNAC 1 cut(s) 1279
MalI GATC 2 cut(s) 452, 1380
MbiI CCGCTC 1 cut(s) 1437
MboI GATC 2 cut(s) 450, 1378
MboII GAAGA 7 cut(s) 567, 652, 918, 934, 1376, 1377, 1406
MhlI GDGCHC 1 cut(s) 1027
MluCI AATT 6 cut(s) 146, 183, 750, 777, 792, 1441
MmeI TCCRAC 2 cut(s) 703, 791
Mph1103I ATGCAT 3 cut(s) 469, 565, 604
MroI TCCGGA 1 cut(s) 420
MroXI GAANNNNTTC 2 cut(s) 870, 1417
MseI TTAA 4 cut(s) 227, 539, 753, 935
MslI CAYNNNNRTG 2 cut(s) 683, 1277
MspI CCGG 4 cut(s) 421, 483, 1214, 1224
MspR9I CCNGG 3 cut(s) 212, 1225, 1320
Mva1269I GAATGC 3 cut(s) 118, 345, 467
MvaI CCWGG 2 cut(s) 212, 1320
MwoI GCNNNNNNNGC 4 cut(s) 488, 974, 998, 1253
NciI CCSGG 1 cut(s) 1225
NdeI CATATG 3 cut(s) 455, 493, 1192
NdeII GATC 2 cut(s) 450, 1378
NlaIII CATG 9 cut(s) 112, 563, 574, 606, 621, 688, 1023, 1090, 1276
NlaIV GGNNCC 5 cut(s) 49, 93, 435, 967, 1025
NmuCI GTSAC 1 cut(s) 1279
NsiI ATGCAT 3 cut(s) 469, 565, 604
NspI RCATGY 1 cut(s) 563
PagI TCATGA 1 cut(s) 108
PctI GAATGC 3 cut(s) 118, 345, 467
PdmI GAANNNNTTC 2 cut(s) 870, 1417
PfeI GAWTC 4 cut(s) 130, 628, 716, 807
PkrI GCNGC 9 cut(s) 6, 283, 616, 1000, 1072, 1198, 1201, 1325, 1436
PshBI ATTAAT 1 cut(s) 753
Psp1406I AACGTT 1 cut(s) 1052
Psp6I CCWGG 2 cut(s) 210, 1318
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 2 cut(s) 210, 1318
PspN4I GGNNCC 5 cut(s) 49, 93, 435, 967, 1025
PspOMI GGGCCC 1 cut(s) 1023
PspPI GGNCC 6 cut(s) 91, 585, 1023, 1024, 1211, 1216
PstI CTGCAG 3 cut(s) 286, 645, 815
PstNI CAGNNNCTG 1 cut(s) 845
RsaI GTAC 5 cut(s) 383, 511, 844, 1008, 1302
RsaNI GTAC 5 cut(s) 382, 510, 843, 1007, 1301
RseI CAYNNNNRTG 2 cut(s) 683, 1277
SaqAI TTAA 4 cut(s) 227, 539, 753, 935
SatI GCNGC 9 cut(s) 5, 282, 615, 999, 1071, 1197, 1200, 1324, 1435
Sau3AI GATC 2 cut(s) 450, 1378
Sau96I GGNCC 6 cut(s) 91, 585, 1023, 1024, 1211, 1216
ScrFI CCNGG 3 cut(s) 212, 1225, 1320
SduI GDGCHC 1 cut(s) 1027
SfaNI GCATC 6 cut(s) 216, 418, 535, 716, 749, 1211
SfcI CTRYAG 3 cut(s) 282, 641, 811
SinI GGWCC 2 cut(s) 585, 1211
SmiMI CAYNNNNRTG 2 cut(s) 683, 1277
SmlI CTYRAG 3 cut(s) 117, 318, 439
SmoI CTYRAG 3 cut(s) 117, 318, 439
Sse9I AATT 6 cut(s) 146, 183, 750, 777, 792, 1441
SsiI CCGC 4 cut(s) 431, 615, 1219, 1435
SspI AATATT 1 cut(s) 30
SspMI CTAG 2 cut(s) 525, 1176
StyD4I CCNGG 3 cut(s) 210, 1223, 1318
StyI CCWWGG 1 cut(s) 993
TaaI ACNGT 3 cut(s) 277, 1146, 1315
TaiI ACGT 1 cut(s) 1055
TaqI TCGA 4 cut(s) 194, 388, 904, 1066
TaqII GACCGA 1 cut(s) 602
TasI AATT 6 cut(s) 146, 183, 750, 777, 792, 1441
TauI GCSGC 2 cut(s) 617, 1437
TfiI GAWTC 4 cut(s) 130, 628, 716, 807
Tru1I TTAA 4 cut(s) 227, 539, 753, 935
Tru9I TTAA 4 cut(s) 227, 539, 753, 935
TscAI CASTG 3 cut(s) 650, 993, 1318
TseFI GTSAC 1 cut(s) 1279
TseI GCWGC 7 cut(s) 4, 281, 998, 1070, 1196, 1199, 1323
Tsp45I GTSAC 1 cut(s) 1279
TspDTI ATGAA 7 cut(s) 66, 125, 863, 940, 1095, 1156, 1174
TspGWI ACGGA 1 cut(s) 994
TspRI CASTG 3 cut(s) 650, 993, 1318
VpaK11BI GGWCC 2 cut(s) 585, 1211
VspI ATTAAT 1 cut(s) 753
XapI RAATTY 1 cut(s) 146
XceI RCATGY 1 cut(s) 563
XmnI GAANNNNTTC 2 cut(s) 870, 1417
XspI CTAG 2 cut(s) 525, 1176
Zsp2I ATGCAT 3 cut(s) 469, 565, 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.