Rw2G017280

nucleobase-ascorbate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0010966
Physical Location & Seq
Reverse (-)
21282235 .. 21288361
6127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G017280.1

Sequence Viewer

Length: 2220 bp
ATGGCAACCGGGTCGATCTCAGATTTCGTAAACAAGGCCGAGAGTGTGAGGGGTCGAGCTGAAGTGGGCTCTGCTGAGCCAAAGGTCGGAGCTTTTGTGCCGAGGAGGGATCACAATCCGAGAGAGCTGAAATCATGGGCGAAGAGAACTGGGTTTGTGTCTAATTTCTCAGGGGAGACGGTGGGGAGTAGCAGTGGGAGGAATGACAGTGGTGGTGGGTTTGATTTGGAGAGCGGTTTTAGGGGTGGAAGTGGGTGTTCTCCAAAGTTTGAGATAGATCCGGTTCTGGGCCGGACCAGGCCCACTGGAGAGGCTGAGATTGAGCCAGCTGGAAATGGAGGGGTGAGGAGTGAGAGTGAGGAGGCAATGAGGGTGGAGAGTAGGAGGAGGAGGAGTGAGGATGAGCCTGTTTTGGGTAGAGATGAGGAGAGGAGTGTTGGTAATGAGGGAAATGAGAGTAGGAATAATGGGAATGGAGTCATTGCAGTTGCTTCGGCGGGCGAGGCGAAGAAGATGGATCAGGGAGAGGAAAGAGAGGAAATGCATTTGTATCCGGATGGTGAAGAAGAGCCTGTTCATGGAGGGTGGGGTAGGCCGTCTGCAATGAGGATTGGATTAAGAGAAAATCTGGGTTTCGTCCCACTAATATATTACGGTCTGCAGCACTACTTATCATTGGCCGGCTCACTGATATTCATCCCTCTGATCATTGTACCAACCATGGGGGGAACAGATAAGGATACTGCCACAGTGATCTCGACAATGCTGCTGGTTTCTGGTATTACAACAATATTGCACTCTTACTTTGGAACCCGACTTCCATTAGTTCAAGGAAGTTCATTTGTATATTTGGCACCAGCGTTAGTTATCATGAATGCTCAAGAATATCGGAATCTTACAGAACATAAATTTAGGCATATAATGAGAGAACTGCAAGGAGCTATAATCATTGGTTCGATATTTCAAAGCATCCTGGGATTTACTGGTTTAATGTCTTTATTGCTGAGATTGATAAACCCTGTTGTCGTTGCACCAACTGTTGCTGCAGTAGGTTTGGCCTTTTTTAGTTATGGCTTTCCTCAAGCTGGTAGTTGTGTGGAAATCAGCATTCCACAGATACTTTTGGTTCTTATGTTCACCTTGTACCTTCGAGGGGTAAACATCTTTGGTCATCGTCTTTTCCGGATTTATGCGGTTCCCTTGAGCATAATGATCATATGGACTTATGCATTCTTTTTGACAGCCGGTGGAGCATATGATTACAAAGGCTGTACCTCTGATATACCTAGTTCAAATATCTTAATAGATGCTTGTAGAAGACATGCATATACTATGCAACATTGTAGGACCGATGTTTCAAATGCATGGAGAACTGCCGCATGGGTCAGGATTCCCTACCCTCTGCAGTGGGGTATCCCTATCTTCCATTTCAGGACTTCCATTATCATGGTCTTTGTATCACTTGTTGCATCAGTTGATTCGGTTGGAACATATCACTCTGCATCTATGCAAATTAATCTGAAGCCTCCAACCCGAGGAATTGTCAGCAGAGGAATTGCATTGGAGGGATTCTGCAGTATATTGGCAGGACTTTGGGGTTCAGGTACTGGGTCAACAACCTTGACAGAAAATGTTCATACAATCAACATAACAAAGGTGGCAAGTCGAAGAGTTGTGGAACTTGGAGCAGTTTTCTTAATCTTCTTCTCATTCATAGGAAAAGTGGGTGCCATTCTTGCCTCTATACCACTGGCCTTGGCTGCTTCCGTACTCTGCTTCACATGGGCCCTTGTTGTGGCATTGGGTCTCTCAATGTTGCAGTATAGTCGAGCAGCAAGTTTTAGAAACATGATGATAGTTGGCGTTTCATTGTTTCTTGGTTTATCTATTCCTGCATATTTTCAACAGTATCAACCAGAAACCAGCTTCATACTCCCTAGCTACTTCATTCCTTATGCAGCAGCATCTAATGGACCGGCCCGCACCGGGAGTAAACAACTTGACTTTGCTATAAATGCACTTATGTCTTTGAACATGGTGGTGACACTCGTGGTAGCATTGGTACTGGAAAACACTGTCCCAGGCAGCCGTCAGGAACGAGGGGTGTATATATGGTCAAAACCAGAAGACATAAATACTGATCCATCTTCACTTGAAGATTATTCCTTACCAAGAAAAGTTTCCAGATGTCTTTGCCGCTCTAATTGTCTGGGCGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Xan_ur_permease

Protein Analysis

739

Amino Acids

80.43

Weight (kDa)

8.42

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xan_ur_permease PF00860 215 - 634 1.4e-68 Permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 853, 1727
AccBSI CCGCTC 2 cut(s) 234, 2199
AccIII TCCGGA 2 cut(s) 553, 1182
AciI CCGC 6 cut(s) 234, 497, 1193, 1377, 1981, 2197
AclWI GGATC 4 cut(s) 117, 272, 525, 2135
AcoI YGGCCR 1 cut(s) 678
AcsI RAATTY 1 cut(s) 908
AcuI CTGAAG 2 cut(s) 81, 1541
AcyI GRCGYC 1 cut(s) 2214
AfaI GTAC 6 cut(s) 714, 1145, 1273, 1606, 1770, 2064
AgsI TTSAA 7 cut(s) 830, 965, 1293, 1359, 1904, 2032, 2156
AjnI CCWGG 3 cut(s) 296, 972, 2080
AjuI GAANNNNNNNTTGG 2 cut(s) 2164, 2196
AloI GAACNNNNNNTCC 2 cut(s) 802, 834
AluBI AGCT 8 cut(s) 59, 92, 127, 329, 941, 1085, 1926, 1941
AluI AGCT 8 cut(s) 59, 92, 127, 329, 941, 1085, 1926, 1941
Alw26I GTCTC 2 cut(s) 170, 1811
AlwI GGATC 4 cut(s) 117, 272, 525, 2135
AlwNI CAGNNNCTG 1 cut(s) 1607
Ama87I CYCGRG 1 cut(s) 1533
Aor13HI TCCGGA 2 cut(s) 553, 1182
AoxI GGCC 9 cut(s) 36, 289, 299, 593, 678, 1056, 1752, 1785, 1977
ApaI GGGCCC 1 cut(s) 1789
ApeKI GCWGC 8 cut(s) 661, 766, 1043, 1760, 1832, 1958, 1961, 2085
ApoI RAATTY 1 cut(s) 908
AseI ATTAAT 1 cut(s) 1515
Asp700I GAANNNNTTC 2 cut(s) 1632, 2179
AspS9I GGNCC 8 cut(s) 289, 294, 300, 1347, 1785, 1786, 1973, 1978
AsuC2I CCSGG 2 cut(s) 10, 1987
AsuHPI GGTGA 4 cut(s) 355, 572, 1129, 2053
AvaI CYCGRG 1 cut(s) 1533
AvaII GGWCC 3 cut(s) 294, 1347, 1973
BaeGI GKGCMC 1 cut(s) 1789
BanI GGYRCC 2 cut(s) 853, 1727
BanII GRGCYC 2 cut(s) 71, 1789
BauI CACGAG 1 cut(s) 2048
BbsI GAAGAC 2 cut(s) 1324, 2133
BbvI GCAGC 8 cut(s) 673, 753, 1030, 1747, 1844, 1970, 1973, 2097
BccI CCATC 3 cut(s) 508, 551, 2152
BceAI ACGGC 2 cut(s) 580, 2073
BcgI CGANNNNNNTGC 7 cut(s) 28, 474, 508, 748, 782, 1808, 1842
BciT130I CCWGG 3 cut(s) 298, 974, 2082
BciVI GTATCC 3 cut(s) 561, 733, 1424
BclI TGATCA 2 cut(s) 705, 1212
BcnI CCSGG 2 cut(s) 10, 1987
BcoDI GTCTC 2 cut(s) 170, 1811
BfaI CTAG 2 cut(s) 1287, 1938
BfmI CTRYAG 4 cut(s) 659, 1044, 1403, 1573
BfuI GTATCC 3 cut(s) 561, 733, 1424
BlpI GCTNAGC 1 cut(s) 75
Bme1390I CCNGG 5 cut(s) 10, 298, 974, 1987, 2082
Bme18I GGWCC 3 cut(s) 294, 1347, 1973
BmeT110I CYCGRG 1 cut(s) 1533
BmgT120I GGNCC 8 cut(s) 289, 294, 300, 1347, 1785, 1786, 1973, 1978
BmiI GGNNCC 5 cut(s) 811, 855, 1197, 1729, 1787
BmrFI CCNGG 5 cut(s) 10, 298, 974, 1987, 2082
BmrI ACTGGG 2 cut(s) 159, 1617
BmsI GCATC 5 cut(s) 978, 1297, 1478, 1511, 1973
BmuI ACTGGG 2 cut(s) 159, 1617
BpiI GAAGAC 2 cut(s) 1324, 2133
BpmI CTGGAG 1 cut(s) 327
Bpu1102I GCTNAGC 1 cut(s) 75
BpuEI CTTGAG 3 cut(s) 864, 1065, 1222
BpuMI CCSGG 2 cut(s) 10, 1987
BsaBI GATNNNNATC 2 cut(s) 114, 695
BsaHI GRCGYC 1 cut(s) 2214
BsaI GGTCTC 1 cut(s) 1811
BsaJI CCNNGG 6 cut(s) 101, 720, 973, 1534, 1755, 2080
BsaWI WCCGGW 3 cut(s) 280, 553, 1182
Bse118I RCCGGY 3 cut(s) 680, 1244, 1975
Bse1I ACTGG 6 cut(s) 154, 310, 988, 1612, 1755, 2070
Bse3DI GCAATG 3 cut(s) 372, 480, 609
Bse8I GATNNNNATC 2 cut(s) 114, 695
BseAI TCCGGA 2 cut(s) 553, 1182
BseBI CCWGG 3 cut(s) 298, 974, 2082
BseDI CCNNGG 6 cut(s) 101, 720, 973, 1534, 1755, 2080
BseGI GGATG 4 cut(s) 406, 562, 696, 969
BseJI GATNNNNATC 2 cut(s) 114, 695
BseMI GCAATG 3 cut(s) 372, 480, 609
BseMII CTCAG 5 cut(s) 33, 66, 183, 306, 995
BseNI ACTGG 6 cut(s) 154, 310, 988, 1612, 1755, 2070
BseRI GAGGAG 8 cut(s) 118, 361, 374, 400, 403, 406, 440, 445
BseSI GKGCMC 1 cut(s) 1789
BseXI GCAGC 8 cut(s) 673, 753, 1030, 1747, 1844, 1970, 1973, 2097
BshFI GGCC 9 cut(s) 38, 291, 301, 595, 680, 1058, 1754, 1787, 1979
BshNI GGYRCC 2 cut(s) 853, 1727
BsiHKCI CYCGRG 1 cut(s) 1533
BsiSI CCGG 9 cut(s) 9, 281, 292, 554, 681, 1183, 1245, 1976, 1986
BslFI GGGAC 2 cut(s) 623, 2063
BsmAI GTCTC 2 cut(s) 170, 1811
BsmBI CGTCTC 1 cut(s) 170
BsmFI GGGAC 2 cut(s) 623, 2063
BsmI GAATGC 3 cut(s) 880, 1107, 1229
BsnI GGCC 9 cut(s) 38, 291, 301, 595, 680, 1058, 1754, 1787, 1979
Bso31I GGTCTC 1 cut(s) 1811
BsoBI CYCGRG 1 cut(s) 1533
Bsp120I GGGCCC 1 cut(s) 1785
Bsp1286I GDGCHC 2 cut(s) 71, 1789
Bsp13I TCCGGA 2 cut(s) 553, 1182
Bsp143I GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
Bsp1720I GCTNAGC 1 cut(s) 75
Bsp19I CCATGG 1 cut(s) 720
BspACI CCGC 6 cut(s) 234, 497, 1193, 1377, 1981, 2197
BspANI GGCC 9 cut(s) 38, 291, 301, 595, 680, 1058, 1754, 1787, 1979
BspCNI CTCAG 5 cut(s) 32, 67, 182, 307, 996
BspEI TCCGGA 2 cut(s) 553, 1182
BspHI TCATGA 1 cut(s) 870
BspLI GGNNCC 5 cut(s) 811, 855, 1197, 1729, 1787
BspMAI CTGCAG 4 cut(s) 663, 1048, 1407, 1577
BspPI GGATC 4 cut(s) 117, 272, 525, 2135
BspQI GCTCTTC 1 cut(s) 561
BspT107I GGYRCC 2 cut(s) 853, 1727
BspTNI GGTCTC 1 cut(s) 1811
BsrBI CCGCTC 2 cut(s) 234, 2199
BsrDI GCAATG 3 cut(s) 372, 480, 609
BsrFI RCCGGY 3 cut(s) 680, 1244, 1975
BsrI ACTGG 6 cut(s) 154, 310, 988, 1612, 1755, 2070
BssAI RCCGGY 3 cut(s) 680, 1244, 1975
BssECI CCNNGG 6 cut(s) 101, 720, 973, 1534, 1755, 2080
BssMI GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
BssNI GRCGYC 1 cut(s) 2214
BssSI CACGAG 1 cut(s) 2048
BssT1I CCWWGG 2 cut(s) 720, 1755
Bst2BI CACGAG 1 cut(s) 2048
Bst2UI CCWGG 3 cut(s) 298, 974, 2082
Bst4CI ACNGT 7 cut(s) 181, 209, 656, 751, 1039, 1908, 2077
Bst6I CTCTTC 3 cut(s) 137, 561, 1663
BstACI GRCGYC 1 cut(s) 2214
BstC8I GCNNGC 4 cut(s) 327, 499, 682, 1981
BstDEI CTNAG 5 cut(s) 19, 75, 169, 315, 1004
BstDSI CCRYGG 1 cut(s) 720
BstF5I GGATG 4 cut(s) 406, 562, 696, 969
BstKTI GATC 8 cut(s) 18, 112, 280, 520, 708, 756, 1215, 2143
BstMAI GTCTC 2 cut(s) 170, 1811
BstMBI GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
BstMWI GCNNNNNNNGC 5 cut(s) 503, 1250, 1736, 1760, 2015
BstNI CCWGG 3 cut(s) 298, 974, 2082
BstNSI RCATGY 1 cut(s) 1325
BstSCI CCNGG 5 cut(s) 8, 296, 972, 1985, 2080
BstSFI CTRYAG 4 cut(s) 659, 1044, 1403, 1573
BstSLI GKGCMC 1 cut(s) 1789
BstV1I GCAGC 8 cut(s) 673, 753, 1030, 1747, 1844, 1970, 1973, 2097
BstV2I GAAGAC 2 cut(s) 1324, 2133
BstX2I RGATCY 1 cut(s) 277
BstXI CCANNNNNNTGG 1 cut(s) 1447
BstYI RGATCY 1 cut(s) 277
BsuI GTATCC 3 cut(s) 561, 733, 1424
BsuRI GGCC 9 cut(s) 38, 291, 301, 595, 680, 1058, 1754, 1787, 1979
BtgI CCRYGG 1 cut(s) 720
BtsCI GGATG 4 cut(s) 406, 562, 696, 969
BtsI GCAGTG 2 cut(s) 199, 1412
BtsIMutI CAGTG 8 cut(s) 199, 214, 303, 686, 756, 1412, 1748, 2073
Cac8I GCNNGC 4 cut(s) 327, 499, 682, 1981
CaiI CAGNNNCTG 1 cut(s) 1607
CciI TCATGA 1 cut(s) 870
Cfr10I RCCGGY 3 cut(s) 680, 1244, 1975
Cfr13I GGNCC 8 cut(s) 289, 294, 300, 1347, 1785, 1786, 1973, 1978
CseI GACGC 1 cut(s) 2203
Csp6I GTAC 6 cut(s) 713, 1144, 1272, 1605, 1769, 2063
CspCI CAANNNNNGTGG 4 cut(s) 354, 389, 1737, 1772
CviQI GTAC 6 cut(s) 713, 1144, 1272, 1605, 1769, 2063
DdeI CTNAG 5 cut(s) 19, 75, 169, 315, 1004
DpnI GATC 8 cut(s) 17, 111, 279, 519, 707, 755, 1214, 2142
DpnII GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
EaeI YGGCCR 1 cut(s) 678
Eam1104I CTCTTC 3 cut(s) 137, 561, 1663
EarI CTCTTC 3 cut(s) 137, 561, 1663
Eco130I CCWWGG 2 cut(s) 720, 1755
Eco24I GRGCYC 2 cut(s) 71, 1789
Eco31I GGTCTC 1 cut(s) 1811
Eco47I GGWCC 3 cut(s) 294, 1347, 1973
Eco57I CTGAAG 2 cut(s) 81, 1541
Eco88I CYCGRG 1 cut(s) 1533
EcoO109I RGGNCCY 1 cut(s) 1786
EcoRII CCWGG 3 cut(s) 296, 972, 2080
EcoT14I CCWWGG 2 cut(s) 720, 1755
EcoT22I ATGCAT 4 cut(s) 546, 1231, 1327, 1366
EcoT38I GRGCYC 2 cut(s) 71, 1789
ErhI CCWWGG 2 cut(s) 720, 1755
Esp3I CGTCTC 1 cut(s) 170
FaqI GGGAC 2 cut(s) 623, 2063
FauI CCCGC 2 cut(s) 490, 1988
FauNDI CATATG 2 cut(s) 1217, 1255
FbaI TGATCA 2 cut(s) 705, 1212
FokI GGATG 4 cut(s) 413, 569, 683, 956
FriOI GRGCYC 2 cut(s) 71, 1789
FspBI CTAG 2 cut(s) 1287, 1938
GsuI CTGGAG 1 cut(s) 327
HaeIII GGCC 9 cut(s) 38, 291, 301, 595, 680, 1058, 1754, 1787, 1979
HapII CCGG 9 cut(s) 9, 281, 292, 554, 681, 1183, 1245, 1976, 1986
HgaI GACGC 1 cut(s) 2203
Hin1I GRCGYC 1 cut(s) 2214
HincII GTYRAC 1 cut(s) 1614
HindII GTYRAC 1 cut(s) 1614
HinfI GANTC 5 cut(s) 477, 892, 1390, 1478, 1569
HpaII CCGG 9 cut(s) 9, 281, 292, 554, 681, 1183, 1245, 1976, 1986
HphI GGTGA 4 cut(s) 355, 572, 1129, 2053
Hpy166II GTNNAC 5 cut(s) 31, 1137, 1159, 1614, 1994
Hpy188I TCNGA 8 cut(s) 22, 89, 120, 705, 891, 1279, 1521, 2219
Hpy188III TCNNGA 9 cut(s) 554, 757, 871, 881, 1183, 1387, 1432, 2093, 2184
Hpy8I GTNNAC 5 cut(s) 31, 1137, 1159, 1614, 1994
HpyAV CCTTC 1 cut(s) 1157
HpyCH4III ACNGT 7 cut(s) 181, 209, 656, 751, 1039, 1908, 2077
HpyF10VI GCNNNNNNNGC 5 cut(s) 503, 1250, 1736, 1760, 2015
HpyF3I CTNAG 5 cut(s) 19, 75, 169, 315, 1004
Hsp92I GRCGYC 1 cut(s) 2214
Kpn2I TCCGGA 2 cut(s) 553, 1182
KroI GCCGGC 1 cut(s) 680
KroNI GCCGGC 1 cut(s) 682
Ksp22I TGATCA 2 cut(s) 705, 1212
Kzo9I GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
LguI GCTCTTC 1 cut(s) 561
LmnI GCTCC 4 cut(s) 89, 938, 1250, 1685
Lsp1109I GCAGC 8 cut(s) 673, 753, 1030, 1747, 1844, 1970, 1973, 2097
LweI GCATC 5 cut(s) 978, 1297, 1478, 1511, 1973
MaeI CTAG 2 cut(s) 1287, 1938
MaeIII GTNAC 1 cut(s) 2041
MalI GATC 8 cut(s) 17, 111, 279, 519, 707, 755, 1214, 2142
MbiI CCGCTC 2 cut(s) 234, 2199
MboI GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
MflI RGATCY 1 cut(s) 277
MhlI GDGCHC 2 cut(s) 71, 1789
MluCI AATT 6 cut(s) 163, 908, 1512, 1539, 1554, 2203
MlyI GAGTC 1 cut(s) 486
MmeI TCCRAC 3 cut(s) 67, 1465, 1553
Mph1103I ATGCAT 4 cut(s) 546, 1231, 1327, 1366
MroI TCCGGA 2 cut(s) 553, 1182
MroNI GCCGGC 1 cut(s) 680
MroXI GAANNNNTTC 2 cut(s) 1632, 2179
MseI TTAA 5 cut(s) 617, 989, 1301, 1515, 1697
MslI CAYNNNNRTG 2 cut(s) 1445, 2039
MspA1I CMGCKG 1 cut(s) 329
MspI CCGG 9 cut(s) 9, 281, 292, 554, 681, 1183, 1245, 1976, 1986
MspR9I CCNGG 5 cut(s) 10, 298, 974, 1987, 2082
Mva1269I GAATGC 3 cut(s) 880, 1107, 1229
MvaI CCWGG 3 cut(s) 298, 974, 2082
MwoI GCNNNNNNNGC 5 cut(s) 503, 1250, 1736, 1760, 2015
NaeI GCCGGC 1 cut(s) 682
NciI CCSGG 2 cut(s) 10, 1987
NcoI CCATGG 1 cut(s) 720
NdeI CATATG 2 cut(s) 1217, 1255
NdeII GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
NgoMIV GCCGGC 1 cut(s) 680
NlaIV GGNNCC 5 cut(s) 811, 855, 1197, 1729, 1787
NmeAIII GCCGAG 2 cut(s) 64, 126
NmuCI GTSAC 1 cut(s) 2041
NsiI ATGCAT 4 cut(s) 546, 1231, 1327, 1366
NspI RCATGY 1 cut(s) 1325
PagI TCATGA 1 cut(s) 870
PciSI GCTCTTC 1 cut(s) 561
PctI GAATGC 3 cut(s) 880, 1107, 1229
PdiI GCCGGC 1 cut(s) 682
PdmI GAANNNNTTC 2 cut(s) 1632, 2179
PfeI GAWTC 4 cut(s) 892, 1390, 1478, 1569
PleI GAGTC 1 cut(s) 485
PpsI GAGTC 1 cut(s) 485
PshBI ATTAAT 1 cut(s) 1515
Psp6I CCWGG 3 cut(s) 296, 972, 2080
PspGI CCWGG 3 cut(s) 296, 972, 2080
PspN4I GGNNCC 5 cut(s) 811, 855, 1197, 1729, 1787
PspOMI GGGCCC 1 cut(s) 1785
PspPI GGNCC 8 cut(s) 289, 294, 300, 1347, 1785, 1786, 1973, 1978
PstI CTGCAG 4 cut(s) 663, 1048, 1407, 1577
PstNI CAGNNNCTG 1 cut(s) 1607
PsuI RGATCY 1 cut(s) 277
PvuII CAGCTG 1 cut(s) 329
RsaI GTAC 6 cut(s) 714, 1145, 1273, 1606, 1770, 2064
RsaNI GTAC 6 cut(s) 713, 1144, 1272, 1605, 1769, 2063
RseI CAYNNNNRTG 2 cut(s) 1445, 2039
SapI GCTCTTC 1 cut(s) 561
SaqAI TTAA 5 cut(s) 617, 989, 1301, 1515, 1697
Sau3AI GATC 8 cut(s) 15, 109, 277, 517, 705, 753, 1212, 2140
Sau96I GGNCC 8 cut(s) 289, 294, 300, 1347, 1785, 1786, 1973, 1978
SchI GAGTC 1 cut(s) 486
ScrFI CCNGG 5 cut(s) 10, 298, 974, 1987, 2082
SduI GDGCHC 2 cut(s) 71, 1789
SfaNI GCATC 5 cut(s) 978, 1297, 1478, 1511, 1973
SfcI CTRYAG 4 cut(s) 659, 1044, 1403, 1573
SinI GGWCC 3 cut(s) 294, 1347, 1973
SmiMI CAYNNNNRTG 2 cut(s) 1445, 2039
SmlI CTYRAG 3 cut(s) 879, 1080, 1201
SmoI CTYRAG 3 cut(s) 879, 1080, 1201
Sse9I AATT 6 cut(s) 163, 908, 1512, 1539, 1554, 2203
SsiI CCGC 6 cut(s) 234, 497, 1193, 1377, 1981, 2197
SspI AATATT 1 cut(s) 792
SspMI CTAG 2 cut(s) 1287, 1938
StyD4I CCNGG 5 cut(s) 8, 296, 972, 1985, 2080
StyI CCWWGG 2 cut(s) 720, 1755
TaaI ACNGT 7 cut(s) 181, 209, 656, 751, 1039, 1908, 2077
TaqI TCGA 7 cut(s) 14, 55, 758, 956, 1150, 1666, 1828
TaqII GACCGA 1 cut(s) 1364
TasI AATT 6 cut(s) 163, 908, 1512, 1539, 1554, 2203
TauI GCSGC 2 cut(s) 1379, 2199
TfiI GAWTC 4 cut(s) 892, 1390, 1478, 1569
Tru1I TTAA 5 cut(s) 617, 989, 1301, 1515, 1697
Tru9I TTAA 5 cut(s) 617, 989, 1301, 1515, 1697
TscAI CASTG 8 cut(s) 199, 214, 310, 693, 756, 1412, 1755, 2080
TseFI GTSAC 1 cut(s) 2041
TseI GCWGC 8 cut(s) 661, 766, 1043, 1760, 1832, 1958, 1961, 2085
Tsp45I GTSAC 1 cut(s) 2041
TspDTI ATGAA 9 cut(s) 566, 685, 828, 887, 1625, 1702, 1857, 1918, 1936
TspGWI ACGGA 1 cut(s) 1756
TspRI CASTG 8 cut(s) 199, 214, 310, 693, 756, 1412, 1755, 2080
VpaK11BI GGWCC 3 cut(s) 294, 1347, 1973
VspI ATTAAT 1 cut(s) 1515
XapI RAATTY 1 cut(s) 908
XceI RCATGY 1 cut(s) 1325
XmnI GAANNNNTTC 2 cut(s) 1632, 2179
XspI CTAG 2 cut(s) 1287, 1938
Zsp2I ATGCAT 4 cut(s) 546, 1231, 1327, 1366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.