Rroxscaffold_2G00132690

nucleobase-ascorbate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0010966
Physical Location & Seq
Forward (+)
69687239 .. 69693868
6630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00132690.1

Sequence Viewer

Length: 2196 bp
ATGGCAACTGGGTCGATCTCAGATTTCGTAAACAAGGCCGAGAGTGTGAGGGGTCGAGCAGAAGTGGGCTCTGTTGAGCCAAAGGTCGGAGCTTTTGTGCCGAGGAGGGATCACAATCCGAGAGAGCTGAAATCATGGGCGAAGAGAACTGGGTTTGTGTCTAATTTCTCAGGGGAGACGGTGGGGAGTAGCAGTGGGAGGAATGAGAGTGGTGGTGGTGGGTTTGATGGGTCGTCTCCGAAGTTTGAGATAGATCCGGTTCTGGGCCGGACCAGGCCCACTGGAGGGGCTGAGATTGAGCCAGCTGGAAATGGAGGGGTGAGGAGTGAGAGTGAGGAGGCAATGGGGGTGGAGAGTAGGAGGAGGAGGAGTGAGGATGAGCCTGTTTTGGGTAGACATGAGGAGAGGAGTGTTGGTAATGAGGGAAATGAGAACAGGAATAATGGGAATGGAGTCATTGCAGTTGCTTCGGCGGGCGAGGTGAAGAAGATGGATCAGGGAGATGAAAGAGAGGAAATGCATTTGTATCCGGATGGTGAAGAAGAGCCAGTTCATGGAGGGTGGGGTAGGCCGTCTGCAATGAGGATTGGACTAAGAGAAAATCTGGGTTTTGTCCCACTAATATATTACGGTCTGCAGCACTACTTATCATTGGCTGGCTCACTGATATTCATCCCTCTGATCATTGTACCAACCATGGGGGGAACAGATAAGGATACTGCCACAGTGATCTCGACAATGCTGCTGGTTTCTGGTATTACAACAATATTGCACTCTTACTTTGGAACCCGACTTCCATTAGTTCAAGGAAGTTCATTTGTATATTTGGCACCAGCGTTAGTTATCATGAATGCTCAAGAATATCGGAATCTTACAGAGCATAAATTTAGGCATATAATGAGAGAACTGCAAGGAGCTATAATTATTGGTTCGATATTTCAAAGCATCCTGGGATTTACTGGTTTAATGTCTTTATTGCTGAGATTGATAAACCCTATTGTCGTTGCACCAACTGTTGCTGCAGTAGGTTTGGCCTTTTTTAGTTATGGCTTTCCTCAAGCTGGTAGTTGTGTGGAAATCAGCATTCCACAGATAATTTTGGTTCTTTTGTTCACCTTGTACCTTCGAGGGGTAAACATCTTTGGGCATCGTCTTTTCCGGATTTATGCGGTTCCCTTGAGCATAATGATCATATGGACTTATGCATTCTTTTTGACAGCCGGTGGAGCATATGATTACAAAGGCTGTACCTCTGATATACCTAGTTCAAATATCTTAATAGATGCTTGTAGAAGACATGCATATACTATGCAACATTGTAGGACCGATGTTTCAAATGCATGGAGAACTGCCGCATGGGTCAGGATTCCCTACCCTCTGCAGTGGGGTATCCCTATCTTCCATTTCAGGACTTCCATTATCATGGTCTTTGTATCACTTGTTGCATCAGTTGATTCGGTTGGAACATATCACTCTGCATCTATGCAAATTAATCTGAAGCCTCCAACCCGAGGAATTGTCAGCAGAGGAATTGCATTGGAGGGATTCTGCAGTATATTGGCAGGACTTTGGGGTTCAGGTACTGGGTCAACAACCTTGACAGAAAATGTTCATACAATCAACATAACAAAGGTGGCAAGTCGAAGAGTTGTGGAACTTGGAGCAGTTTTCTTAATCTTCTTCTCATTCATAGGAAAAGTGGGTGCCATTCTTGCCTCTATACCACTGGCCTTGGCTGCTTCCGTACTCTGCTTCACATGGGCCCTTGTTGTGGCATTGGGACTCTCAACGTTGCAGTATAGTCGAGCAGCAAGTTTTAGAAACATGATGATAGTTGGCGTTTCATTGTTTCTTGGTTTATCTATTCCTGCATATTTTCAACAGTACCAACCAGAGTCCAGCTTCATACTCCCTAGCTACTTCATTCCTTATGCAGCAGCATCTAATGGACCGGCCCACACCGGGAGTAAACAACTTGACTTTGCTATAAATGCACTTATGTCTTTGAACATGGTGGTGACACTCGTGGTAGCATTGGTACTGGAAAACACTGTCCCAGGCAGCCGTCAGGAACGAGGGGTGTATATATGGTCAAAACCAGAAGACATAAATACCGATCCATCTTCACTTGAAGATTATTCCTTACCAAGAAAAGTTTCCAGATGTCTTTGCCGCTCTAATTGTCTGGGCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Xan_ur_permease

Protein Analysis

731

Amino Acids

79.45

Weight (kDa)

8.45

Isoelectric Point (pI)

45.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xan_ur_permease PF00860 207 - 626 2.7e-67 Permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 829, 1703
AccB7I CCANNNNNTGG 1 cut(s) 554
AccBSI CCGCTC 1 cut(s) 2175
AccI GTMKAC 1 cut(s) 394
AccIII TCCGGA 2 cut(s) 529, 1158
AciI CCGC 4 cut(s) 473, 1169, 1353, 2173
AclI AACGTT 1 cut(s) 1790
AclWI GGATC 4 cut(s) 117, 248, 501, 2111
AcsI RAATTY 1 cut(s) 884
AcuI CTGAAG 1 cut(s) 1517
AfaI GTAC 7 cut(s) 690, 1121, 1249, 1582, 1746, 1886, 2040
AgsI TTSAA 7 cut(s) 806, 941, 1269, 1335, 1880, 2008, 2132
AjnI CCWGG 3 cut(s) 272, 948, 2056
AjuI GAANNNNNNNTTGG 2 cut(s) 2140, 2172
AloI GAACNNNNNNTCC 2 cut(s) 778, 810
AluBI AGCT 7 cut(s) 92, 127, 305, 917, 1061, 1902, 1917
AluI AGCT 7 cut(s) 92, 127, 305, 917, 1061, 1902, 1917
Alw26I GTCTC 2 cut(s) 170, 240
AlwI GGATC 4 cut(s) 117, 248, 501, 2111
AlwNI CAGNNNCTG 1 cut(s) 1583
Ama87I CYCGRG 1 cut(s) 1509
Aor13HI TCCGGA 2 cut(s) 529, 1158
AoxI GGCC 8 cut(s) 36, 265, 275, 569, 1032, 1728, 1761, 1953
ApaI GGGCCC 1 cut(s) 1765
ApeKI GCWGC 8 cut(s) 637, 742, 1019, 1736, 1808, 1934, 1937, 2061
ApoI RAATTY 1 cut(s) 884
AseI ATTAAT 1 cut(s) 1491
Asp700I GAANNNNTTC 2 cut(s) 1608, 2155
AspS9I GGNCC 8 cut(s) 265, 270, 276, 1323, 1761, 1762, 1949, 1954
AsuC2I CCSGG 1 cut(s) 1963
AsuHPI GGTGA 5 cut(s) 331, 493, 548, 1105, 2029
AvaI CYCGRG 1 cut(s) 1509
AvaII GGWCC 3 cut(s) 270, 1323, 1949
BaeGI GKGCMC 1 cut(s) 1765
BanI GGYRCC 2 cut(s) 829, 1703
BanII GRGCYC 2 cut(s) 71, 1765
BauI CACGAG 1 cut(s) 2024
BbsI GAAGAC 2 cut(s) 1300, 2109
BbvI GCAGC 8 cut(s) 649, 729, 1006, 1723, 1820, 1946, 1949, 2073
BccI CCATC 4 cut(s) 221, 484, 527, 2128
BceAI ACGGC 2 cut(s) 556, 2049
BcgI CGANNNNNNTGC 7 cut(s) 28, 450, 484, 724, 758, 1784, 1818
BciT130I CCWGG 3 cut(s) 274, 950, 2058
BciVI GTATCC 3 cut(s) 537, 709, 1400
BclI TGATCA 2 cut(s) 681, 1188
BcnI CCSGG 1 cut(s) 1963
BcoDI GTCTC 2 cut(s) 170, 240
BfaI CTAG 2 cut(s) 1263, 1914
BfmI CTRYAG 4 cut(s) 635, 1020, 1379, 1549
BfuI GTATCC 3 cut(s) 537, 709, 1400
Bme1390I CCNGG 4 cut(s) 274, 950, 1963, 2058
Bme18I GGWCC 3 cut(s) 270, 1323, 1949
BmeT110I CYCGRG 1 cut(s) 1509
BmgT120I GGNCC 8 cut(s) 265, 270, 276, 1323, 1761, 1762, 1949, 1954
BmiI GGNNCC 5 cut(s) 787, 831, 1173, 1705, 1763
BmrFI CCNGG 4 cut(s) 274, 950, 1963, 2058
BmrI ACTGGG 3 cut(s) 18, 159, 1593
BmsI GCATC 6 cut(s) 954, 1156, 1273, 1454, 1487, 1949
BmuI ACTGGG 3 cut(s) 18, 159, 1593
BpiI GAAGAC 2 cut(s) 1300, 2109
BpmI CTGGAG 1 cut(s) 303
BpuEI CTTGAG 3 cut(s) 840, 1041, 1198
BpuMI CCSGG 1 cut(s) 1963
BsaBI GATNNNNATC 2 cut(s) 114, 671
BsaJI CCNNGG 6 cut(s) 101, 696, 949, 1510, 1731, 2056
BsaWI WCCGGW 3 cut(s) 256, 529, 1158
Bse118I RCCGGY 2 cut(s) 1220, 1951
Bse1I ACTGG 8 cut(s) 13, 154, 286, 548, 964, 1588, 1731, 2046
Bse3DI GCAATG 3 cut(s) 348, 456, 585
Bse8I GATNNNNATC 2 cut(s) 114, 671
BseAI TCCGGA 2 cut(s) 529, 1158
BseBI CCWGG 3 cut(s) 274, 950, 2058
BseDI CCNNGG 6 cut(s) 101, 696, 949, 1510, 1731, 2056
BseGI GGATG 4 cut(s) 382, 538, 672, 945
BseJI GATNNNNATC 2 cut(s) 114, 671
BseMI GCAATG 3 cut(s) 348, 456, 585
BseMII CTCAG 4 cut(s) 33, 183, 282, 971
BseNI ACTGG 8 cut(s) 13, 154, 286, 548, 964, 1588, 1731, 2046
BseRI GAGGAG 8 cut(s) 118, 337, 350, 376, 379, 382, 416, 421
BseSI GKGCMC 1 cut(s) 1765
BseXI GCAGC 8 cut(s) 649, 729, 1006, 1723, 1820, 1946, 1949, 2073
BshFI GGCC 8 cut(s) 38, 267, 277, 571, 1034, 1730, 1763, 1955
BshNI GGYRCC 2 cut(s) 829, 1703
BsiHKCI CYCGRG 1 cut(s) 1509
BsiSI CCGG 7 cut(s) 257, 268, 530, 1159, 1221, 1952, 1962
BslFI GGGAC 3 cut(s) 599, 1794, 2039
BsmAI GTCTC 2 cut(s) 170, 240
BsmBI CGTCTC 2 cut(s) 170, 240
BsmFI GGGAC 3 cut(s) 599, 1794, 2039
BsmI GAATGC 3 cut(s) 856, 1083, 1205
BsnI GGCC 8 cut(s) 38, 267, 277, 571, 1034, 1730, 1763, 1955
BsoBI CYCGRG 1 cut(s) 1509
Bsp120I GGGCCC 1 cut(s) 1761
Bsp1286I GDGCHC 2 cut(s) 71, 1765
Bsp13I TCCGGA 2 cut(s) 529, 1158
Bsp143I GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
Bsp19I CCATGG 1 cut(s) 696
BspACI CCGC 4 cut(s) 473, 1169, 1353, 2173
BspANI GGCC 8 cut(s) 38, 267, 277, 571, 1034, 1730, 1763, 1955
BspCNI CTCAG 4 cut(s) 32, 182, 283, 972
BspEI TCCGGA 2 cut(s) 529, 1158
BspHI TCATGA 1 cut(s) 846
BspLI GGNNCC 5 cut(s) 787, 831, 1173, 1705, 1763
BspMAI CTGCAG 4 cut(s) 639, 1024, 1383, 1553
BspPI GGATC 4 cut(s) 117, 248, 501, 2111
BspQI GCTCTTC 1 cut(s) 537
BspT107I GGYRCC 2 cut(s) 829, 1703
BsrBI CCGCTC 1 cut(s) 2175
BsrDI GCAATG 3 cut(s) 348, 456, 585
BsrFI RCCGGY 2 cut(s) 1220, 1951
BsrI ACTGG 8 cut(s) 13, 154, 286, 548, 964, 1588, 1731, 2046
BssAI RCCGGY 2 cut(s) 1220, 1951
BssECI CCNNGG 6 cut(s) 101, 696, 949, 1510, 1731, 2056
BssMI GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
BssSI CACGAG 1 cut(s) 2024
BssT1I CCWWGG 2 cut(s) 696, 1731
Bst2BI CACGAG 1 cut(s) 2024
Bst2UI CCWGG 3 cut(s) 274, 950, 2058
Bst4CI ACNGT 6 cut(s) 181, 632, 727, 1015, 1884, 2053
Bst6I CTCTTC 3 cut(s) 137, 537, 1639
BstC8I GCNNGC 3 cut(s) 303, 475, 658
BstDEI CTNAG 5 cut(s) 19, 169, 291, 593, 980
BstDSI CCRYGG 1 cut(s) 696
BstF5I GGATG 4 cut(s) 382, 538, 672, 945
BstKTI GATC 8 cut(s) 18, 112, 256, 496, 684, 732, 1191, 2119
BstMAI GTCTC 2 cut(s) 170, 240
BstMBI GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
BstMWI GCNNNNNNNGC 4 cut(s) 1226, 1712, 1736, 1991
BstNI CCWGG 3 cut(s) 274, 950, 2058
BstNSI RCATGY 1 cut(s) 1301
BstSCI CCNGG 4 cut(s) 272, 948, 1961, 2056
BstSFI CTRYAG 4 cut(s) 635, 1020, 1379, 1549
BstSLI GKGCMC 1 cut(s) 1765
BstV1I GCAGC 8 cut(s) 649, 729, 1006, 1723, 1820, 1946, 1949, 2073
BstV2I GAAGAC 2 cut(s) 1300, 2109
BstX2I RGATCY 1 cut(s) 253
BstXI CCANNNNNNTGG 1 cut(s) 1423
BstYI RGATCY 1 cut(s) 253
BsuI GTATCC 3 cut(s) 537, 709, 1400
BsuRI GGCC 8 cut(s) 38, 267, 277, 571, 1034, 1730, 1763, 1955
BtgI CCRYGG 1 cut(s) 696
BtsCI GGATG 4 cut(s) 382, 538, 672, 945
BtsI GCAGTG 2 cut(s) 199, 1388
BtsIMutI CAGTG 7 cut(s) 199, 279, 662, 732, 1388, 1724, 2049
Cac8I GCNNGC 3 cut(s) 303, 475, 658
CaiI CAGNNNCTG 1 cut(s) 1583
CciI TCATGA 1 cut(s) 846
Cfr10I RCCGGY 2 cut(s) 1220, 1951
Cfr13I GGNCC 8 cut(s) 265, 270, 276, 1323, 1761, 1762, 1949, 1954
Csp6I GTAC 7 cut(s) 689, 1120, 1248, 1581, 1745, 1885, 2039
CspCI CAANNNNNGTGG 4 cut(s) 330, 365, 1713, 1748
CviQI GTAC 7 cut(s) 689, 1120, 1248, 1581, 1745, 1885, 2039
DdeI CTNAG 5 cut(s) 19, 169, 291, 593, 980
DpnI GATC 8 cut(s) 17, 111, 255, 495, 683, 731, 1190, 2118
DpnII GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
Eam1104I CTCTTC 3 cut(s) 137, 537, 1639
EarI CTCTTC 3 cut(s) 137, 537, 1639
Eco130I CCWWGG 2 cut(s) 696, 1731
Eco24I GRGCYC 2 cut(s) 71, 1765
Eco47I GGWCC 3 cut(s) 270, 1323, 1949
Eco57I CTGAAG 1 cut(s) 1517
Eco88I CYCGRG 1 cut(s) 1509
EcoO109I RGGNCCY 1 cut(s) 1762
EcoRII CCWGG 3 cut(s) 272, 948, 2056
EcoT14I CCWWGG 2 cut(s) 696, 1731
EcoT22I ATGCAT 4 cut(s) 522, 1207, 1303, 1342
EcoT38I GRGCYC 2 cut(s) 71, 1765
ErhI CCWWGG 2 cut(s) 696, 1731
Esp3I CGTCTC 2 cut(s) 170, 240
FaqI GGGAC 3 cut(s) 599, 1794, 2039
FauI CCCGC 1 cut(s) 466
FauNDI CATATG 2 cut(s) 1193, 1231
FbaI TGATCA 2 cut(s) 681, 1188
FblI GTMKAC 1 cut(s) 394
FokI GGATG 4 cut(s) 389, 545, 659, 932
FriOI GRGCYC 2 cut(s) 71, 1765
FspBI CTAG 2 cut(s) 1263, 1914
GsuI CTGGAG 1 cut(s) 303
HaeIII GGCC 8 cut(s) 38, 267, 277, 571, 1034, 1730, 1763, 1955
HapII CCGG 7 cut(s) 257, 268, 530, 1159, 1221, 1952, 1962
HincII GTYRAC 1 cut(s) 1590
HindII GTYRAC 1 cut(s) 1590
HinfI GANTC 7 cut(s) 453, 868, 1366, 1454, 1545, 1782, 1895
HpaII CCGG 7 cut(s) 257, 268, 530, 1159, 1221, 1952, 1962
HphI GGTGA 5 cut(s) 331, 493, 548, 1105, 2029
Hpy166II GTNNAC 6 cut(s) 31, 395, 1113, 1135, 1590, 1970
Hpy188I TCNGA 8 cut(s) 22, 89, 120, 240, 681, 867, 1255, 1497
Hpy188III TCNNGA 9 cut(s) 530, 733, 847, 857, 1159, 1363, 1408, 2069, 2160
Hpy8I GTNNAC 6 cut(s) 31, 395, 1113, 1135, 1590, 1970
HpyAV CCTTC 1 cut(s) 1133
HpyCH4III ACNGT 6 cut(s) 181, 632, 727, 1015, 1884, 2053
HpyCH4IV ACGT 1 cut(s) 1790
HpyF10VI GCNNNNNNNGC 4 cut(s) 1226, 1712, 1736, 1991
HpyF3I CTNAG 5 cut(s) 19, 169, 291, 593, 980
HpySE526I ACGT 1 cut(s) 1790
Kpn2I TCCGGA 2 cut(s) 529, 1158
Ksp22I TGATCA 2 cut(s) 681, 1188
Kzo9I GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
LguI GCTCTTC 1 cut(s) 537
LmnI GCTCC 4 cut(s) 89, 914, 1226, 1661
Lsp1109I GCAGC 8 cut(s) 649, 729, 1006, 1723, 1820, 1946, 1949, 2073
LweI GCATC 6 cut(s) 954, 1156, 1273, 1454, 1487, 1949
MaeI CTAG 2 cut(s) 1263, 1914
MaeII ACGT 1 cut(s) 1790
MaeIII GTNAC 1 cut(s) 2017
MalI GATC 8 cut(s) 17, 111, 255, 495, 683, 731, 1190, 2118
MbiI CCGCTC 1 cut(s) 2175
MboI GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
MflI RGATCY 1 cut(s) 253
MhlI GDGCHC 2 cut(s) 71, 1765
MluCI AATT 8 cut(s) 163, 884, 921, 1095, 1488, 1515, 1530, 2179
MlyI GAGTC 3 cut(s) 462, 1776, 1904
MmeI TCCRAC 3 cut(s) 67, 1441, 1529
Mph1103I ATGCAT 4 cut(s) 522, 1207, 1303, 1342
MroI TCCGGA 2 cut(s) 529, 1158
MroXI GAANNNNTTC 2 cut(s) 1608, 2155
MseI TTAA 4 cut(s) 965, 1277, 1491, 1673
MslI CAYNNNNRTG 2 cut(s) 1421, 2015
MspA1I CMGCKG 1 cut(s) 305
MspI CCGG 7 cut(s) 257, 268, 530, 1159, 1221, 1952, 1962
MspR9I CCNGG 4 cut(s) 274, 950, 1963, 2058
Mva1269I GAATGC 3 cut(s) 856, 1083, 1205
MvaI CCWGG 3 cut(s) 274, 950, 2058
MwoI GCNNNNNNNGC 4 cut(s) 1226, 1712, 1736, 1991
NciI CCSGG 1 cut(s) 1963
NcoI CCATGG 1 cut(s) 696
NdeI CATATG 2 cut(s) 1193, 1231
NdeII GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
NlaIV GGNNCC 5 cut(s) 787, 831, 1173, 1705, 1763
NmeAIII GCCGAG 2 cut(s) 64, 126
NmuCI GTSAC 1 cut(s) 2017
NsiI ATGCAT 4 cut(s) 522, 1207, 1303, 1342
NspI RCATGY 1 cut(s) 1301
PagI TCATGA 1 cut(s) 846
PciSI GCTCTTC 1 cut(s) 537
PctI GAATGC 3 cut(s) 856, 1083, 1205
PdmI GAANNNNTTC 2 cut(s) 1608, 2155
PfeI GAWTC 4 cut(s) 868, 1366, 1454, 1545
PflMI CCANNNNNTGG 1 cut(s) 554
PleI GAGTC 3 cut(s) 461, 1776, 1903
PpsI GAGTC 3 cut(s) 461, 1776, 1903
PshBI ATTAAT 1 cut(s) 1491
Psp1406I AACGTT 1 cut(s) 1790
Psp6I CCWGG 3 cut(s) 272, 948, 2056
PspGI CCWGG 3 cut(s) 272, 948, 2056
PspN4I GGNNCC 5 cut(s) 787, 831, 1173, 1705, 1763
PspOMI GGGCCC 1 cut(s) 1761
PspPI GGNCC 8 cut(s) 265, 270, 276, 1323, 1761, 1762, 1949, 1954
PstI CTGCAG 4 cut(s) 639, 1024, 1383, 1553
PstNI CAGNNNCTG 1 cut(s) 1583
PsuI RGATCY 1 cut(s) 253
PvuII CAGCTG 1 cut(s) 305
RsaI GTAC 7 cut(s) 690, 1121, 1249, 1582, 1746, 1886, 2040
RsaNI GTAC 7 cut(s) 689, 1120, 1248, 1581, 1745, 1885, 2039
RseI CAYNNNNRTG 2 cut(s) 1421, 2015
SapI GCTCTTC 1 cut(s) 537
SaqAI TTAA 4 cut(s) 965, 1277, 1491, 1673
Sau3AI GATC 8 cut(s) 15, 109, 253, 493, 681, 729, 1188, 2116
Sau96I GGNCC 8 cut(s) 265, 270, 276, 1323, 1761, 1762, 1949, 1954
SchI GAGTC 3 cut(s) 462, 1776, 1904
ScrFI CCNGG 4 cut(s) 274, 950, 1963, 2058
SduI GDGCHC 2 cut(s) 71, 1765
SfaNI GCATC 6 cut(s) 954, 1156, 1273, 1454, 1487, 1949
SfcI CTRYAG 4 cut(s) 635, 1020, 1379, 1549
SinI GGWCC 3 cut(s) 270, 1323, 1949
SmiMI CAYNNNNRTG 2 cut(s) 1421, 2015
SmlI CTYRAG 3 cut(s) 855, 1056, 1177
SmoI CTYRAG 3 cut(s) 855, 1056, 1177
Sse9I AATT 8 cut(s) 163, 884, 921, 1095, 1488, 1515, 1530, 2179
SsiI CCGC 4 cut(s) 473, 1169, 1353, 2173
SspI AATATT 1 cut(s) 768
SspMI CTAG 2 cut(s) 1263, 1914
StyD4I CCNGG 4 cut(s) 272, 948, 1961, 2056
StyI CCWWGG 2 cut(s) 696, 1731
TaaI ACNGT 6 cut(s) 181, 632, 727, 1015, 1884, 2053
TaiI ACGT 1 cut(s) 1793
TaqI TCGA 7 cut(s) 14, 55, 734, 932, 1126, 1642, 1804
TaqII GACCGA 1 cut(s) 1340
TasI AATT 8 cut(s) 163, 884, 921, 1095, 1488, 1515, 1530, 2179
TauI GCSGC 2 cut(s) 1355, 2175
TfiI GAWTC 4 cut(s) 868, 1366, 1454, 1545
Tru1I TTAA 4 cut(s) 965, 1277, 1491, 1673
Tru9I TTAA 4 cut(s) 965, 1277, 1491, 1673
TscAI CASTG 7 cut(s) 199, 286, 669, 732, 1388, 1731, 2056
TseFI GTSAC 1 cut(s) 2017
TseI GCWGC 8 cut(s) 637, 742, 1019, 1736, 1808, 1934, 1937, 2061
Tsp45I GTSAC 1 cut(s) 2017
TspGWI ACGGA 1 cut(s) 1732
TspRI CASTG 7 cut(s) 199, 286, 669, 732, 1388, 1731, 2056
Van91I CCANNNNNTGG 1 cut(s) 554
VpaK11BI GGWCC 3 cut(s) 270, 1323, 1949
VspI ATTAAT 1 cut(s) 1491
XapI RAATTY 1 cut(s) 884
XceI RCATGY 1 cut(s) 1301
XmiI GTMKAC 1 cut(s) 394
XmnI GAANNNNTTC 2 cut(s) 1608, 2155
XspI CTAG 2 cut(s) 1263, 1914
Zsp2I ATGCAT 4 cut(s) 522, 1207, 1303, 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.