MD15G1438500.v1.1

xyloglucan galactosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013818
Physical Location & Seq
Reverse (-)
53808076 .. 53809821
1746 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1438500.v1.1.491

Sequence Viewer

Length: 1746 bp
ATGGAGAAATCGCGGGTTGCCGGAAGGTGCCATAATCAACCCTGGTTTTTCCTCCTAATTGCTTCATTTCTTTTAGTCTTCGTGTTGCTTTTATCCGACTATTCGGCTCTAAGCGCCGGAAGAAATACTCAACAGGTCACCTATTTTATCACCAACTTTGCAAACGTAATAGTCAACCAAGATAATTCTACCTCTCTTCCTTATCATGATCATTCTACTCCAATATCATCCAATCAAACCGAGATTTGGCTCACGCTTAATGTCACGAATTCGAGTACTAGTAACGCTATTCCTGCACAGTTTTTTGGTCATGGCAGAGAGGAAAATCATAGCGTTAAGTCTGTTGTCATTAGTAAGTCACCACCAGCACAACCGATATCTCCACCACCAGTACAATCGATATCTTCACCACCAGTACAATCGATATCTTCACCACCAGCACAACCGATATCTAATGAGATTGGGAAGAATAACTCTGATGCTGATTCGTGCTCCGGTCGATATATTTATGTTTATGATCTTCCTAAGAGGTTCAACCAGGACTTGCTCAAGAATTGCCATTCACTCGTGAGATGGAATGATATGTGCTCCCACTTGTCAAACATGGGACTTGGTCCAAGAATTCACAATTCTAAAGGAAAACTGGTGGGAAATGGTTGGTTTGCTACAAACCAGTTTTCATTGGAAGTTATTTTTCATAACAGGATGAAGAAGTACAGGTGTTTAACCAATGATTCGTCGTTGGCCTCTGCGATATTTGTACCCTTTTATGCCGGCCTTGATGTGGGACGATACCTCTGGGACTACAACACATCGGTGAGAGATGCATCTCCTCTTGAATTGGTGAAGTGGCTTTCGCGTAGGCCCGAATGGAAAGCAATGTGGGGGAGAGACCATTTCTTAGTTGGAGGGAGGATTGCTTGGGATTTCAGGAGGCTGACAGACAACAACTCCGATTGGGGTTCCAAGCTTATGTTTTTGCCCGAATCCAAGAACATGACATTGTTGTCTATCGAATCGGGCTCCTGGAACAATGAGCAGGCAATACCATACCCAACATACTTCCATCCCTCAAAGGACAGTGAGGTGTTCGAGTGGCAGAGAAGAATGAGAAACCGAAAAAGGCGGTACCTCTTCTCTTTCGCTGGTGCACCAAGGTCCGATTCGAAAGACAATATTCGGGATACGATTATAAACCAATGCCGGTCTTCGGCCACATGCAAACTTGTAAGCTGCTACAATGGTGCAAAAAAGTGCGACGACCCTCTAAACGTAATGAAGGTGTTTGAAGCATCAGTTTTTTGCCTGCAGCCTTCGGGAGACTCGTACACGCGTCGATCAACGTTTGATTCCATCTTGGCAGGCTGCATTCCAGTTTTCTTCCATCCGGGTTCCGCCTACGTGCAATACTTGTGGCATTTCCCCAACACCCCATCTAAATACTCCGTGTTCATATCCGAAAACGATATCAAGGATCAAAAGGCGATCATCAACGAGACGCTGCTTCGAATTCCGAAGCATCAAGTGGTAGCAATGAGAAAGGAAGTTGTAAGATTGATTCCGAGAGTGATATATGCAAATCCAATGGCACCAAGACTGGAGACAGTTGAAGATGCATTTGACATAGCGGTTAAAGGAATGCTTGACAAGGTAGAGAAAATTAGGAGGGACATGAAAGAGGGCAAGGATCCTGGCGTTGCTTTTTCAGAACTAAACGGTAGAAAATTTGATATGCCTGCAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

582

Amino Acids

66.01

Weight (kDa)

9.21

Isoelectric Point (pI)

47.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 163 - 499 8.6e-84 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013818)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32750 AT2G32750
fragaria_vesca FvH4_5g28240
malus_domestica MD08G1246000.v1.1 MD15G1438500.v1.1
prunus_persica Prupe.1G581600_v2.0.a1
pyrus_communis pycom08g21350
rosa_chinensis RchiOBHm_Chr7g0220401
rosa_laevigata RLG00000002222
rosa_multiflora Rmu_sc0006673.1_g000004
rosa_roxburghii Rroxscaffold_3G00239410
rosa_rugosa Rorug07G0193700
rosa_samantha Rh7AG334800 Rh7BG325700 Rh7CG352500 Rh7DG331700
rosa_wichuraiana Rw7G028540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1193
AasI GACNNNNNNGTC 1 cut(s) 1006
Acc36I ACCTGC 1 cut(s) 1730
Acc65I GGTACC 1 cut(s) 1128
AccB1I GGYRCC 3 cut(s) 27, 1128, 1588
AccII CGCG 3 cut(s) 13, 859, 1333
AciI CCGC 4 cut(s) 13, 1126, 1395, 1628
AclI AACGTT 1 cut(s) 1343
AclWI GGATC 3 cut(s) 1482, 1682, 1695
AcoI YGGCCR 1 cut(s) 1212
AcsI RAATTY 4 cut(s) 268, 621, 1509, 1724
AfaI GTAC 7 cut(s) 277, 393, 417, 716, 762, 1130, 1328
AfiI CCNNNNNNNGG 3 cut(s) 246, 784, 1210
AflIII ACRYGT 1 cut(s) 1331
AgsI TTSAA 4 cut(s) 535, 839, 1289, 1610
AhlI ACTAGT 1 cut(s) 278
AjnI CCWGG 4 cut(s) 41, 537, 1025, 1690
AjuI GAANNNNNNNTTGG 2 cut(s) 1147, 1179
AleI CACNNNNGTG 1 cut(s) 815
AluBI AGCT 2 cut(s) 970, 1233
AluI AGCT 2 cut(s) 970, 1233
Alw21I GWGCWC 3 cut(s) 494, 590, 1153
Alw26I GTCTC 4 cut(s) 885, 1314, 1490, 1595
Alw44I GTGCAC 1 cut(s) 1149
AlwI GGATC 3 cut(s) 1482, 1682, 1695
AoxI GGCC 4 cut(s) 744, 775, 863, 1212
ApaLI GTGCAC 1 cut(s) 1149
ApeKI GCWGC 4 cut(s) 1233, 1309, 1365, 1501
ApoI RAATTY 4 cut(s) 268, 621, 1509, 1724
Asp718I GGTACC 1 cut(s) 1128
AspLEI GCGC 1 cut(s) 116
AspS9I GGNCC 3 cut(s) 614, 864, 1158
AsuC2I CCSGG 1 cut(s) 1389
AsuHPI GGTGA 7 cut(s) 130, 142, 351, 399, 423, 829, 856
AsuII TTCGAA 2 cut(s) 1166, 1507
AvaII GGWCC 2 cut(s) 614, 1158
BaeGI GKGCMC 1 cut(s) 1153
BamHI GGATCC 1 cut(s) 1687
BanI GGYRCC 3 cut(s) 27, 1128, 1588
BanII GRGCYC 1 cut(s) 1025
BauI CACGAG 1 cut(s) 566
BbsI GAAGAC 2 cut(s) 70, 1200
Bbv12I GWGCWC 3 cut(s) 494, 590, 1153
BbvI GCAGC 4 cut(s) 1220, 1321, 1352, 1488
BccI CCATC 5 cut(s) 567, 1074, 1361, 1392, 1441
BciT130I CCWGG 4 cut(s) 43, 539, 1027, 1692
BciVI GTATCC 1 cut(s) 1177
BclI TGATCA 1 cut(s) 208
BcnI CCSGG 1 cut(s) 1389
BcoDI GTCTC 4 cut(s) 885, 1314, 1490, 1595
BcuI ACTAGT 1 cut(s) 278
BfaI CTAG 1 cut(s) 279
BfmI CTRYAG 2 cut(s) 1307, 1737
BfoI RGCGCY 1 cut(s) 117
BfuAI ACCTGC 1 cut(s) 1730
BfuI GTATCC 1 cut(s) 1177
BisI GCNGC 4 cut(s) 1234, 1310, 1366, 1502
BlsI GCNGC 4 cut(s) 1235, 1311, 1367, 1503
BmcAI AGTACT 1 cut(s) 277
Bme1390I CCNGG 5 cut(s) 43, 539, 1027, 1389, 1692
Bme18I GGWCC 2 cut(s) 614, 1158
BmgT120I GGNCC 3 cut(s) 614, 864, 1158
BmiI GGNNCC 7 cut(s) 29, 964, 1024, 1130, 1393, 1590, 1689
BmrFI CCNGG 5 cut(s) 43, 539, 1027, 1389, 1692
BmsI GCATC 6 cut(s) 469, 814, 836, 1301, 1528, 1603
BpiI GAAGAC 2 cut(s) 70, 1200
BpmI CTGGAG 1 cut(s) 1619
Bpu14I TTCGAA 2 cut(s) 1166, 1507
BpuEI CTTGAG 1 cut(s) 533
BpuMI CCSGG 1 cut(s) 1389
Bsa29I ATCGAT 2 cut(s) 398, 422
BsaAI YACGTR 1 cut(s) 1402
BsaI GGTCTC 1 cut(s) 885
BsaJI CCNNGG 2 cut(s) 41, 1154
BsaWI WCCGGW 1 cut(s) 494
BsaXI ACNNNNNCTCC 2 cut(s) 935, 965
Bsc4I CCNNNNNNNGG 3 cut(s) 246, 784, 1210
Bse118I RCCGGY 2 cut(s) 773, 1203
Bse1I ACTGG 6 cut(s) 389, 413, 648, 673, 1373, 1602
Bse3DI GCAATG 2 cut(s) 885, 1539
BseBI CCWGG 4 cut(s) 43, 539, 1027, 1692
BseCI ATCGAT 2 cut(s) 398, 422
BseDI CCNNGG 2 cut(s) 41, 1154
BseGI GGATG 4 cut(s) 227, 711, 1066, 1384
BseLI CCNNNNNNNGG 3 cut(s) 246, 784, 1210
BseMI GCAATG 2 cut(s) 885, 1539
BseNI ACTGG 6 cut(s) 389, 413, 648, 673, 1373, 1602
BseRI GAGGAG 1 cut(s) 822
BseSI GKGCMC 1 cut(s) 1153
BseXI GCAGC 4 cut(s) 1220, 1321, 1352, 1488
BsgI GTGCAG 1 cut(s) 279
Bsh1236I CGCG 3 cut(s) 13, 859, 1333
Bsh1285I CGRYCG 1 cut(s) 499
BshFI GGCC 4 cut(s) 746, 777, 865, 1214
BshNI GGYRCC 3 cut(s) 27, 1128, 1588
BshVI ATCGAT 2 cut(s) 398, 422
BsiEI CGRYCG 1 cut(s) 499
BsiHKAI GWGCWC 3 cut(s) 494, 590, 1153
BsiSI CCGG 6 cut(s) 21, 117, 495, 774, 1204, 1388
BslFI GGGAC 4 cut(s) 621, 801, 815, 1682
BslI CCNNNNNNNGG 3 cut(s) 246, 784, 1210
BsmAI GTCTC 4 cut(s) 885, 1314, 1490, 1595
BsmBI CGTCTC 1 cut(s) 1490
BsmFI GGGAC 4 cut(s) 621, 801, 815, 1682
BsmI GAATGC 2 cut(s) 1368, 1644
BsnI GGCC 4 cut(s) 746, 777, 865, 1214
Bso31I GGTCTC 1 cut(s) 885
Bsp119I TTCGAA 2 cut(s) 1166, 1507
Bsp1286I GDGCHC 4 cut(s) 494, 590, 1025, 1153
Bsp143I GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
BspACI CCGC 4 cut(s) 13, 1126, 1395, 1628
BspANI GGCC 4 cut(s) 746, 777, 865, 1214
BspDI ATCGAT 2 cut(s) 398, 422
BspFNI CGCG 3 cut(s) 13, 859, 1333
BspHI TCATGA 1 cut(s) 205
BspLI GGNNCC 7 cut(s) 29, 964, 1024, 1130, 1393, 1590, 1689
BspMAI CTGCAG 2 cut(s) 1311, 1741
BspMI ACCTGC 1 cut(s) 1730
BspPI GGATC 3 cut(s) 1482, 1682, 1695
BspT104I TTCGAA 2 cut(s) 1166, 1507
BspT107I GGYRCC 3 cut(s) 27, 1128, 1588
BspTNI GGTCTC 1 cut(s) 885
BsrDI GCAATG 2 cut(s) 885, 1539
BsrFI RCCGGY 2 cut(s) 773, 1203
BsrI ACTGG 6 cut(s) 389, 413, 648, 673, 1373, 1602
BssAI RCCGGY 2 cut(s) 773, 1203
BssECI CCNNGG 2 cut(s) 41, 1154
BssMI GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
BssSI CACGAG 1 cut(s) 566
BssT1I CCWWGG 1 cut(s) 1154
Bst2BI CACGAG 1 cut(s) 566
Bst2UI CCWGG 4 cut(s) 43, 539, 1027, 1692
Bst4CI ACNGT 4 cut(s) 300, 1082, 1606, 1718
Bst6I CTCTTC 2 cut(s) 201, 1139
BstBAI YACGTR 1 cut(s) 1402
BstBI TTCGAA 2 cut(s) 1166, 1507
BstC8I GCNNGC 5 cut(s) 775, 1041, 1307, 1363, 1737
BstDEI CTNAG 3 cut(s) 110, 525, 901
BstEII GGTNACC 1 cut(s) 136
BstF5I GGATG 4 cut(s) 227, 711, 1066, 1384
BstFNI CGCG 3 cut(s) 13, 859, 1333
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 1 cut(s) 116
BstKTI GATC 6 cut(s) 211, 520, 1340, 1477, 1488, 1690
BstMAI GTCTC 4 cut(s) 885, 1314, 1490, 1595
BstMBI GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
BstMCI CGRYCG 1 cut(s) 499
BstMWI GCNNNNNNNGC 2 cut(s) 113, 293
BstNI CCWGG 4 cut(s) 43, 539, 1027, 1692
BstNSI RCATGY 1 cut(s) 1221
BstPI GGTNACC 1 cut(s) 136
BstSCI CCNGG 5 cut(s) 41, 537, 1025, 1387, 1690
BstSFI CTRYAG 2 cut(s) 1307, 1737
BstSLI GKGCMC 1 cut(s) 1153
BstUI CGCG 3 cut(s) 13, 859, 1333
BstV1I GCAGC 4 cut(s) 1220, 1321, 1352, 1488
BstV2I GAAGAC 2 cut(s) 70, 1200
BstX2I RGATCY 1 cut(s) 1687
BstYI RGATCY 1 cut(s) 1687
Bsu15I ATCGAT 2 cut(s) 398, 422
BsuI GTATCC 1 cut(s) 1177
BsuRI GGCC 4 cut(s) 746, 777, 865, 1214
BsuTUI ATCGAT 2 cut(s) 398, 422
BtsCI GGATG 4 cut(s) 227, 711, 1066, 1384
BtsIMutI CAGTG 1 cut(s) 1087
BveI ACCTGC 1 cut(s) 1730
Cac8I GCNNGC 5 cut(s) 775, 1041, 1307, 1363, 1737
CciI TCATGA 1 cut(s) 205
CfoI GCGC 1 cut(s) 116
Cfr10I RCCGGY 2 cut(s) 773, 1203
Cfr13I GGNCC 3 cut(s) 614, 864, 1158
ClaI ATCGAT 2 cut(s) 398, 422
CseI GACGC 2 cut(s) 1322, 1507
Csp6I GTAC 7 cut(s) 276, 392, 416, 715, 761, 1129, 1327
CspCI CAANNNNNGTGG 2 cut(s) 1394, 1429
CviAII CATG 6 cut(s) 206, 311, 604, 997, 1218, 1672
CviQI GTAC 7 cut(s) 276, 392, 416, 715, 761, 1129, 1327
DdeI CTNAG 3 cut(s) 110, 525, 901
DpnI GATC 6 cut(s) 210, 519, 1339, 1476, 1487, 1689
DpnII GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
DrdI GACNNNNNNGTC 1 cut(s) 1006
DseDI GACNNNNNNGTC 1 cut(s) 1006
EaeI YGGCCR 1 cut(s) 1212
Eam1104I CTCTTC 2 cut(s) 201, 1139
EarI CTCTTC 2 cut(s) 201, 1139
EciI GGCGGA 1 cut(s) 1384
Eco130I CCWWGG 1 cut(s) 1154
Eco24I GRGCYC 1 cut(s) 1025
Eco31I GGTCTC 1 cut(s) 885
Eco32I GATATC 5 cut(s) 378, 402, 426, 450, 1468
Eco47I GGWCC 2 cut(s) 614, 1158
Eco91I GGTNACC 1 cut(s) 136
EcoO65I GGTNACC 1 cut(s) 136
EcoRI GAATTC 3 cut(s) 268, 621, 1509
EcoRII CCWGG 4 cut(s) 41, 537, 1025, 1690
EcoRV GATATC 5 cut(s) 378, 402, 426, 450, 1468
EcoT14I CCWWGG 1 cut(s) 1154
EcoT22I ATGCAT 2 cut(s) 829, 1618
EcoT38I GRGCYC 1 cut(s) 1025
ErhI CCWWGG 1 cut(s) 1154
Esp3I CGTCTC 1 cut(s) 1490
FaeI CATG 6 cut(s) 209, 314, 607, 1000, 1221, 1675
FalI AAGNNNNNCTT 2 cut(s) 1626, 1658
FaqI GGGAC 4 cut(s) 621, 801, 815, 1682
FatI CATG 6 cut(s) 205, 310, 603, 996, 1217, 1671
FauI CCCGC 1 cut(s) 6
FbaI TGATCA 1 cut(s) 208
Fnu4HI GCNGC 4 cut(s) 1234, 1310, 1366, 1502
FokI GGATG 4 cut(s) 214, 718, 1053, 1371
FriOI GRGCYC 1 cut(s) 1025
Fsp4HI GCNGC 4 cut(s) 1234, 1310, 1366, 1502
FspBI CTAG 1 cut(s) 279
GlaI GCGC 1 cut(s) 115
GluI GCNGC 4 cut(s) 1234, 1310, 1366, 1502
GsuI CTGGAG 1 cut(s) 1619
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 4 cut(s) 746, 777, 865, 1214
HapII CCGG 6 cut(s) 21, 117, 495, 774, 1204, 1388
HgaI GACGC 2 cut(s) 1322, 1507
HhaI GCGC 1 cut(s) 116
Hin1II CATG 6 cut(s) 209, 314, 607, 1000, 1221, 1675
Hin6I GCGC 1 cut(s) 114
HinP1I GCGC 1 cut(s) 114
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HindIII AAGCTT 1 cut(s) 968
HinfI GANTC 8 cut(s) 485, 734, 986, 1016, 1163, 1322, 1349, 1558
HpaII CCGG 6 cut(s) 21, 117, 495, 774, 1204, 1388
HphI GGTGA 7 cut(s) 130, 142, 351, 399, 423, 829, 856
Hpy166II GTNNAC 3 cut(s) 175, 1151, 1329
Hpy188I TCNGA 8 cut(s) 97, 478, 955, 1162, 1459, 1515, 1563, 1708
Hpy188III TCNNGA 8 cut(s) 206, 265, 550, 568, 836, 931, 1181, 1317
Hpy8I GTNNAC 3 cut(s) 175, 1151, 1329
Hpy99I CGWCG 3 cut(s) 742, 1262, 1338
HpyAV CCTTC 3 cut(s) 18, 1273, 1323
HpyCH4III ACNGT 4 cut(s) 300, 1082, 1606, 1718
HpyCH4IV ACGT 4 cut(s) 165, 1272, 1343, 1401
HpyF10VI GCNNNNNNNGC 2 cut(s) 113, 293
HpyF3I CTNAG 3 cut(s) 110, 525, 901
HpySE526I ACGT 4 cut(s) 165, 1272, 1343, 1401
Hsp92II CATG 6 cut(s) 209, 314, 607, 1000, 1221, 1675
HspAI GCGC 1 cut(s) 114
KpnI GGTACC 1 cut(s) 1132
KroI GCCGGC 1 cut(s) 773
KroNI GCCGGC 1 cut(s) 775
Ksp22I TGATCA 1 cut(s) 208
Kzo9I GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
LmnI GCTCC 3 cut(s) 497, 593, 1028
Lsp1109I GCAGC 4 cut(s) 1220, 1321, 1352, 1488
LweI GCATC 6 cut(s) 469, 814, 836, 1301, 1528, 1603
MaeI CTAG 1 cut(s) 279
MaeII ACGT 4 cut(s) 165, 1272, 1343, 1401
MaeIII GTNAC 4 cut(s) 136, 262, 281, 357
MalI GATC 6 cut(s) 210, 519, 1339, 1476, 1487, 1689
MboI GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
MflI RGATCY 1 cut(s) 1687
MhlI GDGCHC 4 cut(s) 494, 590, 1025, 1153
MluI ACGCGT 1 cut(s) 1331
MlyI GAGTC 1 cut(s) 1316
MmeI TCCRAC 2 cut(s) 120, 886
Mph1103I ATGCAT 2 cut(s) 829, 1618
MroNI GCCGGC 1 cut(s) 773
MseI TTAA 5 cut(s) 258, 336, 725, 1632, 1744
MslI CAYNNNNRTG 1 cut(s) 815
MspI CCGG 6 cut(s) 21, 117, 495, 774, 1204, 1388
MspR9I CCNGG 5 cut(s) 43, 539, 1027, 1389, 1692
Mva1269I GAATGC 2 cut(s) 1368, 1644
MvaI CCWGG 4 cut(s) 43, 539, 1027, 1692
MvnI CGCG 3 cut(s) 13, 859, 1333
MwoI GCNNNNNNNGC 2 cut(s) 113, 293
NaeI GCCGGC 1 cut(s) 775
NciI CCSGG 1 cut(s) 1389
NdeII GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
NgoMIV GCCGGC 1 cut(s) 773
NlaIII CATG 6 cut(s) 209, 314, 607, 1000, 1221, 1675
NlaIV GGNNCC 7 cut(s) 29, 964, 1024, 1130, 1393, 1590, 1689
NmuCI GTSAC 3 cut(s) 136, 262, 357
NsiI ATGCAT 2 cut(s) 829, 1618
NspI RCATGY 1 cut(s) 1221
NspV TTCGAA 2 cut(s) 1166, 1507
OliI CACNNNNGTG 1 cut(s) 815
PagI TCATGA 1 cut(s) 205
PcsI WCGNNNNNNNCGW 1 cut(s) 1322
PctI GAATGC 2 cut(s) 1368, 1644
PdiI GCCGGC 1 cut(s) 775
PfeI GAWTC 7 cut(s) 485, 734, 986, 1016, 1163, 1349, 1558
PflFI GACNNNGTC 1 cut(s) 612
PfoI TCCNGGA 1 cut(s) 1025
PkrI GCNGC 4 cut(s) 1235, 1311, 1367, 1503
PleI GAGTC 1 cut(s) 1316
PpsI GAGTC 1 cut(s) 1316
Ppu21I YACGTR 1 cut(s) 1402
PsiI TTATAA 1 cut(s) 1193
Psp1406I AACGTT 1 cut(s) 1343
Psp6I CCWGG 4 cut(s) 41, 537, 1025, 1690
PspEI GGTNACC 1 cut(s) 136
PspGI CCWGG 4 cut(s) 41, 537, 1025, 1690
PspN4I GGNNCC 7 cut(s) 29, 964, 1024, 1130, 1393, 1590, 1689
PspPI GGNCC 3 cut(s) 614, 864, 1158
PstI CTGCAG 2 cut(s) 1311, 1741
PsuI RGATCY 1 cut(s) 1687
PsyI GACNNNGTC 1 cut(s) 612
RsaI GTAC 7 cut(s) 277, 393, 417, 716, 762, 1130, 1328
RsaNI GTAC 7 cut(s) 276, 392, 416, 715, 761, 1129, 1327
RseI CAYNNNNRTG 1 cut(s) 815
SaqAI TTAA 5 cut(s) 258, 336, 725, 1632, 1744
SatI GCNGC 4 cut(s) 1234, 1310, 1366, 1502
Sau3AI GATC 6 cut(s) 208, 517, 1337, 1474, 1485, 1687
Sau96I GGNCC 3 cut(s) 614, 864, 1158
SbfI CCTGCAGG 1 cut(s) 1741
ScaI AGTACT 1 cut(s) 277
SchI GAGTC 1 cut(s) 1316
ScrFI CCNGG 5 cut(s) 43, 539, 1027, 1389, 1692
SdaI CCTGCAGG 1 cut(s) 1741
SduI GDGCHC 4 cut(s) 494, 590, 1025, 1153
SfaNI GCATC 6 cut(s) 469, 814, 836, 1301, 1528, 1603
SfcI CTRYAG 2 cut(s) 1307, 1737
SfuI TTCGAA 2 cut(s) 1166, 1507
SinI GGWCC 2 cut(s) 614, 1158
SmiMI CAYNNNNRTG 1 cut(s) 815
SmlI CTYRAG 1 cut(s) 548
SmoI CTYRAG 1 cut(s) 548
SpeI ACTAGT 1 cut(s) 278
Sse8387I CCTGCAGG 1 cut(s) 1741
SsiI CCGC 4 cut(s) 13, 1126, 1395, 1628
SspI AATATT 1 cut(s) 1177
SspMI CTAG 1 cut(s) 279
StyD4I CCNGG 5 cut(s) 41, 537, 1025, 1387, 1690
StyI CCWWGG 1 cut(s) 1154
TaaI ACNGT 4 cut(s) 300, 1082, 1606, 1718
TaiI ACGT 4 cut(s) 168, 1275, 1346, 1404
TaqI TCGA 9 cut(s) 272, 398, 422, 499, 1014, 1092, 1166, 1336, 1507
TatI WGTACW 4 cut(s) 275, 391, 415, 714
TfiI GAWTC 7 cut(s) 485, 734, 986, 1016, 1163, 1349, 1558
Tru1I TTAA 5 cut(s) 258, 336, 725, 1632, 1744
Tru9I TTAA 5 cut(s) 258, 336, 725, 1632, 1744
TscAI CASTG 1 cut(s) 1087
TseFI GTSAC 3 cut(s) 136, 262, 357
TseI GCWGC 4 cut(s) 1233, 1309, 1365, 1501
Tsp45I GTSAC 3 cut(s) 136, 262, 357
TspDTI ATGAA 7 cut(s) 54, 669, 686, 722, 1292, 1441, 1688
TspGWI ACGGA 1 cut(s) 1435
TspRI CASTG 1 cut(s) 1087
Tth111I GACNNNGTC 1 cut(s) 612
VneI GTGCAC 1 cut(s) 1149
VpaK11BI GGWCC 2 cut(s) 614, 1158
XapI RAATTY 4 cut(s) 268, 621, 1509, 1724
XceI RCATGY 1 cut(s) 1221
XcmI CCANNNNNNNNNTGG 1 cut(s) 902
XspI CTAG 1 cut(s) 279
ZrmI AGTACT 1 cut(s) 277
Zsp2I ATGCAT 2 cut(s) 829, 1618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.