Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0012413

Physical Location & Seq

Genomic Coordinates Reverse (-)

2669671 .. 2672080

Gene Structure 2410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1037100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGTTCTATTTGATTTTGGTGCTTCTGCTGCTCTGCAACTCTCATTCCCTGGTGGATTCCTTGAACGAGGAAGGCTACGCCCTTTTGTCGTTCAAGCAGTCCATTGCGGAAGACCCAGAAGGGTCTCTGAGCAACTGGAACTCCTCTGATTCCAACCCCTGCACATGGAATGGGATTACATGCAACGACCAAAGGGTTGTCTCTCTCAGCATTCCAAAGAAGAAACTTTCTGGGTTTCTTCCTTCCGCCATGGGAGCCCTCTCCGAGCTCCGCCACGTCAATTTAAGGAACAATAAGTTGTACGGAAGCTTGCCCCTTGAGCTTTTCCAAGCTCTGGGGCTCCAAAGTTTGGTGCTTTATGGAAATTCCTTATCTGGGTCTGTCCCAAATGTGATTGGTAAGCTCAAATACCTTCAATCCCTAGATTTATCAGAAAATTTGTTTAATGGTTCGTTGCCCACGTCGATTATACAATGCAAGAGGCTCAGAACCATCGATCTTAGTCAGAATAATTTCACTGGCTTTCTACCAGAAGGGTTTGGAAGTGGTTTTGTTTCTTTAGAAAAACTTGATCTTTCTTTCAATAAATTCAATGGCTCGATTCCAAGTGATATGGGAAATCTGTCTAGCTTGCAAGGCACTGTTGATTTGTCTCATAATCTGTTTTCTGGTGCAATCCCGGCTAGCCTTGGAAATCTTCCCGAGAAGGTTTACATTGATCTTACATATAACAATTTGAGTGGTCCAATACCGCAAACCGGTGCTCTGATGAACAGAGGACCAACTGCTTTTATTGGGAATCCTGGTCTTTGTGGCACCCCATTGAAGAACCCGTGTTCTTCCGAAGTTTCCGGTGCTAGTCCGCCTTCCTCGATTCCGTTTCTGCCGGATAACTCCCCCCCACAGGATTCTGACGATAATGGTGGAAAGAGTGGGAAAGCAAGAGGGTTGAGTAAAACAGCTGTAATTGCAATTATAGTGAGTGATGTAATTGGCATTTGCCTTGTTGGGCTGCTTTTCTCGTATTGTTATTCGAGGTTTTGGGCTCGTAGTAAGGTTAAGGATGAAAATGGTTTTGGCAAGGGAGGTAAGGGAAAGAAGGAGTGCTTGTGCTTCAGAAGAGATGAATCAGAGACATTATCGGAGAATATGGAGCAGTTCGATCTAGTGGCATTGGATACACACGTGGCATTTGATCTGGACGAGCTTCTTAAGGCGTCTGCTTTTGTTCTTGGAAAAAGTGGAATTGGAATTGTTTACAAAGTTGTGCTTGAAGAAGGAATCACCCTGGCAGTGAGAAGATTGGGCGAAGGGGGTTCCCAGAGATTCAAGGAATTTCAGACGGAAGTTGAAGCAATTGGAAAGCTAAGGCATCCTAACGTTGTTACTCTGAAGGCATATTACTGGTCTGTTGATGAAAAGCTGCTCATATATGACTATATTCCTAATGGCAGCCTTGCCACCGCCCTTCATGGGAAGCCAGGGCTGGTATCATTTACACCGCTATCATGGTCTGTTCGGTTGAATATCATGAAGGGAATTGCAAAAGGCTTGGTCTATCTGCATGAGTTTAGCCCCAAGAAATATGTCCATGGAGATTTGAAGCCAAATAACATACTGCTTGGACAAAACATGGAACCCCGCATTTCTGATTTTGGACTTGGACGCCTTGCAAATATCGCTGGAGGGTCCCCGACTCTACAATCCAATCGAATCCCCACAGAAAAATCACAAGAAAGCAATTTGGGATCTTGTTATCAGGCTCCAGAATCTCTGAAAGTGGTTAAACCATCACAGAAGTGGGATGTGTATTCGTATGGAGTAATCTTACTCGAAATGATTACCGGAAGATTGCCAATAGTCCAAGTGGGTTCCTCAGAAATGGACCTGGTTCAATGGATTCAGCTCAACATTGAAGAGAAGAAGCCTCTTTTAGATGTTTTAGATCCAAATTTGATGCACGACGTGGATAAGGAAGAAGAGATTATAGCGGTTTTGAAGATTGCAATGGCTTGTGTTCACAGCAGCCCTGAAAGGAGACCGATAATGAGGCATATTTCCGATGCTTTGGACAGGTTGGCCACATCTGCTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008356 GO:0009505 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022402 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0036211 GO:0042995 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0061640 GO:0071704 GO:0071944 GO:0090406 GO:0120025 GO:0140096 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

699

Amino Acids

76.09

Weight (kDa)

6.18

Isoelectric Point (pI)

38.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	21 - 62	4.3e-16	Leucine rich repeat N-terminal domain
LRR_14	PF23598	90 - 212	3.9e-07	Leucine-rich repeat region
LRR_8	PF13855	114 - 172	1.3e-06	Leucine rich repeat
LRR_8	PF13855	137 - 197	4.2e-07	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	411 - 689	5.6e-32	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	411 - 686	6.1e-32	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01210
fragaria_vesca	FvH4_4g26710
malus_domestica	MD13G1035300.v1.1 MD16G1037100.v1.1
prunus_persica	Prupe.1G316900_v2.0.a1 Prupe.1G316900_v2.0.a1 Prupe.1G316900_v2.0.a1
pyrus_communis	pycom13g03090 pycom16g03210
rosa_chinensis	RchiOBHm_Chr4g0434401
rosa_laevigata	RLG00000006674
rosa_multiflora	Rmu_co8521181.1_g000003
rosa_roxburghii	Rroxscaffold_5G00375760
rosa_rugosa	Rorug04G0276300
rosa_samantha	Rh4AG331900 Rh4BG339700 Rh4CG354900 Rh4DG334900
rosa_wichuraiana	Rw4G028780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	815
AccB7I	CCANNNNNTGG	2 cut(s)	334, 349
AciI	CCGC	9 cut(s)	107, 246, 271, 752, 863, 1464, 1502, 1642, 1991
AclI	AACGTT	1 cut(s)	1380
AclWI	GGATC	2 cut(s)	1756, 1940
AcoI	YGGCCR	1 cut(s)	2079
AcsI	RAATTY	5 cut(s)	364, 436, 587, 1334, 1951
AcuI	CTGAAG	2 cut(s)	1099, 1412
AcvI	CACGTG	1 cut(s)	1186
AcyI	GRCGYC	2 cut(s)	1217, 1666
AdeI	CACNNNGTG	1 cut(s)	1966
AfaI	GTAC	1 cut(s)	302
AfiI	CCNNNNNNNGG	7 cut(s)	165, 334, 349, 375, 758, 904, 1473
AflII	CTTAAG	1 cut(s)	1211
AflIII	ACRYGT	1 cut(s)	1183
AgeI	ACCGGT	1 cut(s)	758
AjiI	CACGTC	3 cut(s)	277, 462, 1966
AjnI	CCWGG	5 cut(s)	48, 802, 1287, 1480, 1887
AjuI	GAANNNNNNNTTGG	2 cut(s)	1059, 1091
AleI	CACNNNNGTG	1 cut(s)	1798
Alw21I	GWGCWC	2 cut(s)	270, 766
Alw26I	GTCTC	5 cut(s)	129, 205, 657, 1127, 2032
AlwI	GGATC	2 cut(s)	1756, 1940
Ama87I	CYCGRG	1 cut(s)	701
AoxI	GGCC	1 cut(s)	2079
ApeKI	GCWGC	5 cut(s)	28, 1012, 1423, 1452, 2025
ApoI	RAATTY	5 cut(s)	364, 436, 587, 1334, 1951
AsiGI	ACCGGT	1 cut(s)	758
Asp700I	GAANNNNTTC	1 cut(s)	512
AspS9I	GGNCC	4 cut(s)	743, 779, 1689, 1885
AsuC2I	CCSGG	1 cut(s)	680
AsuHPI	GGTGA	1 cut(s)	1276
AsuNHI	GCTAGC	1 cut(s)	683
AvaI	CYCGRG	1 cut(s)	701
AvaII	GGWCC	4 cut(s)	743, 779, 1689, 1885
BaeI	ACNNNNGTAYC	2 cut(s)	1170, 1203
BalI	TGGCCA	1 cut(s)	2081
BanI	GGYRCC	1 cut(s)	815
BanII	GRGCYC	4 cut(s)	259, 270, 342, 1048
BarI	GAAGNNNNNNTAC	2 cut(s)	1385, 1417
BbrPI	CACGTG	1 cut(s)	1186
BbsI	GAAGAC	1 cut(s)	117
Bbv12I	GWGCWC	2 cut(s)	270, 766
BbvI	GCAGC	5 cut(s)	15, 999, 1410, 1464, 2037
BccI	CCATC	2 cut(s)	500, 1798
BciT130I	CCWGG	5 cut(s)	50, 804, 1289, 1482, 1889
BciVI	GTATCC	1 cut(s)	1171
BcnI	CCSGG	1 cut(s)	680
BcoDI	GTCTC	5 cut(s)	129, 205, 657, 1127, 2032
BfaI	CTAG	5 cut(s)	422, 627, 684, 858, 1166
BfrI	CTTAAG	1 cut(s)	1211
BfuI	GTATCC	1 cut(s)	1171
BisI	GCNGC	5 cut(s)	29, 1013, 1424, 1453, 2026
BlsI	GCNGC	5 cut(s)	30, 1014, 1425, 1454, 2027
Bme1390I	CCNGG	6 cut(s)	50, 680, 804, 1289, 1482, 1889
Bme18I	GGWCC	4 cut(s)	743, 779, 1689, 1885
BmeT110I	CYCGRG	1 cut(s)	701
BmgBI	CACGTC	3 cut(s)	277, 462, 1966
BmgT120I	GGNCC	4 cut(s)	743, 779, 1689, 1885
BmiI	GGNNCC	9 cut(s)	256, 341, 817, 1318, 1638, 1690, 1691, 1764, 1873
BmrFI	CCNGG	6 cut(s)	50, 680, 804, 1289, 1482, 1889
BmsI	GCATC	3 cut(s)	1381, 1947, 2053
BmtI	GCTAGC	1 cut(s)	687
BpiI	GAAGAC	1 cut(s)	117
BpmI	CTGGAG	2 cut(s)	1704, 1749
Bpu10I	CCTNAGC	1 cut(s)	1367
BpuEI	CTTGAG	1 cut(s)	338
BpuMI	CCSGG	1 cut(s)	680
Bsa29I	ATCGAT	1 cut(s)	495
BsaAI	YACGTR	1 cut(s)	1186
BsaHI	GRCGYC	2 cut(s)	1217, 1666
BsaI	GGTCTC	2 cut(s)	129, 2032
BsaJI	CCNNGG	6 cut(s)	48, 249, 688, 1287, 1481, 1591
BsaWI	WCCGGW	3 cut(s)	758, 851, 1844
BsaXI	ACNNNNNCTCC	4 cut(s)	125, 155, 1094, 1124
Bsc4I	CCNNNNNNNGG	7 cut(s)	165, 334, 349, 375, 758, 904, 1473
Bse118I	RCCGGY	1 cut(s)	758
Bse1I	ACTGG	3 cut(s)	140, 523, 1409
Bse3DI	GCAATG	2 cut(s)	102, 2013
BseBI	CCWGG	5 cut(s)	50, 804, 1289, 1482, 1889
BseCI	ATCGAT	1 cut(s)	495
BseDI	CCNNGG	6 cut(s)	48, 249, 688, 1287, 1481, 1591
BseGI	GGATG	3 cut(s)	1069, 1372, 1810
BseLI	CCNNNNNNNGG	7 cut(s)	165, 334, 349, 375, 758, 904, 1473
BseMI	GCAATG	2 cut(s)	102, 2013
BseMII	CTCAG	4 cut(s)	119, 220, 499, 1890
BseNI	ACTGG	3 cut(s)	140, 523, 1409
BseRI	GAGGAG	1 cut(s)	133
BseXI	GCAGC	5 cut(s)	15, 999, 1410, 1464, 2037
BsgI	GTGCAG	1 cut(s)	145
BshFI	GGCC	1 cut(s)	2081
BshNI	GGYRCC	1 cut(s)	815
BshTI	ACCGGT	1 cut(s)	758
BshVI	ATCGAT	1 cut(s)	495
BsiHKAI	GWGCWC	2 cut(s)	270, 766
BsiHKCI	CYCGRG	1 cut(s)	701
BsiSI	CCGG	5 cut(s)	680, 759, 852, 887, 1845
BslFI	GGGAC	2 cut(s)	368, 1675
BslI	CCNNNNNNNGG	7 cut(s)	165, 334, 349, 375, 758, 904, 1473
BsmAI	GTCTC	5 cut(s)	129, 205, 657, 1127, 2032
BsmFI	GGGAC	2 cut(s)	368, 1675
BsmI	GAATGC	1 cut(s)	210
BsnI	GGCC	1 cut(s)	2081
Bso31I	GGTCTC	2 cut(s)	129, 2032
BsoBI	CYCGRG	1 cut(s)	701
Bsp1286I	GDGCHC	5 cut(s)	259, 270, 342, 766, 1048
Bsp143I	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
Bsp19I	CCATGG	2 cut(s)	249, 1591
BspACI	CCGC	9 cut(s)	107, 246, 271, 752, 863, 1464, 1502, 1642, 1991
BspANI	GGCC	1 cut(s)	2081
BspCNI	CTCAG	4 cut(s)	120, 219, 498, 1889
BspDI	ATCGAT	1 cut(s)	495
BspHI	TCATGA	1 cut(s)	1530
BspLI	GGNNCC	9 cut(s)	256, 341, 817, 1318, 1638, 1690, 1691, 1764, 1873
BspOI	GCTAGC	1 cut(s)	687
BspPI	GGATC	2 cut(s)	1756, 1940
BspT107I	GGYRCC	1 cut(s)	815
BspTI	CTTAAG	1 cut(s)	1211
BspTNI	GGTCTC	2 cut(s)	129, 2032
BsrDI	GCAATG	2 cut(s)	102, 2013
BsrFI	RCCGGY	1 cut(s)	758
BsrI	ACTGG	3 cut(s)	140, 523, 1409
BssAI	RCCGGY	1 cut(s)	758
BssECI	CCNNGG	6 cut(s)	48, 249, 688, 1287, 1481, 1591
BssMI	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
BssNI	GRCGYC	2 cut(s)	1217, 1666
BssT1I	CCWWGG	3 cut(s)	249, 688, 1591
Bst2UI	CCWGG	5 cut(s)	50, 804, 1289, 1482, 1889
Bst4CI	ACNGT	1 cut(s)	643
Bst6I	CTCTTC	3 cut(s)	1114, 1911, 1974
BstACI	GRCGYC	2 cut(s)	1217, 1666
BstAFI	CTTAAG	1 cut(s)	1211
BstBAI	YACGTR	1 cut(s)	1186
BstC8I	GCNNGC	3 cut(s)	311, 632, 685
BstDEI	CTNAG	6 cut(s)	128, 206, 485, 500, 1367, 1876
BstDSI	CCRYGG	2 cut(s)	249, 1591
BstF5I	GGATG	3 cut(s)	1069, 1372, 1810
BstKTI	GATC	7 cut(s)	499, 574, 721, 1165, 1198, 1751, 1948
BstMAI	GTCTC	5 cut(s)	129, 205, 657, 1127, 2032
BstMBI	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
BstMWI	GCNNNNNNNGC	8 cut(s)	28, 254, 319, 636, 680, 968, 1679, 2087
BstNI	CCWGG	5 cut(s)	50, 804, 1289, 1482, 1889
BstNSI	RCATGY	1 cut(s)	183
BstSCI	CCNGG	6 cut(s)	48, 678, 802, 1287, 1480, 1887
BstV1I	GCAGC	5 cut(s)	15, 999, 1410, 1464, 2037
BstV2I	GAAGAC	1 cut(s)	117
BstX2I	RGATCY	2 cut(s)	1748, 1945
BstYI	RGATCY	2 cut(s)	1748, 1945
Bsu15I	ATCGAT	1 cut(s)	495
BsuI	GTATCC	1 cut(s)	1171
BsuRI	GGCC	1 cut(s)	2081
BsuTUI	ATCGAT	1 cut(s)	495
BtgI	CCRYGG	2 cut(s)	249, 1591
BtrI	CACGTC	3 cut(s)	277, 462, 1966
BtsCI	GGATG	3 cut(s)	1069, 1372, 1810
BtsI	GCAGTG	1 cut(s)	1299
BtsIMutI	CAGTG	3 cut(s)	516, 639, 1299
Cac8I	GCNNGC	3 cut(s)	311, 632, 685
CciI	TCATGA	1 cut(s)	1530
Cfr10I	RCCGGY	1 cut(s)	758
Cfr13I	GGNCC	4 cut(s)	743, 779, 1689, 1885
ClaI	ATCGAT	1 cut(s)	495
CseI	GACGC	2 cut(s)	1206, 1674
CsiI	ACCWGGT	1 cut(s)	1887
Csp6I	GTAC	1 cut(s)	301
CspAI	ACCGGT	1 cut(s)	758
CspCI	CAANNNNNGTGG	2 cut(s)	721, 756
CviAII	CATG	9 cut(s)	165, 180, 250, 1472, 1509, 1531, 1565, 1592, 1633
CviQI	GTAC	1 cut(s)	301
DdeI	CTNAG	6 cut(s)	128, 206, 485, 500, 1367, 1876
DpnI	GATC	7 cut(s)	498, 573, 720, 1164, 1197, 1750, 1947
DpnII	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
DraIII	CACNNNGTG	1 cut(s)	1966
EaeI	YGGCCR	1 cut(s)	2079
Eam1104I	CTCTTC	3 cut(s)	1114, 1911, 1974
EarI	CTCTTC	3 cut(s)	1114, 1911, 1974
EciI	GGCGGA	3 cut(s)	235, 260, 852
Ecl136II	GAGCTC	1 cut(s)	268
Eco130I	CCWWGG	3 cut(s)	249, 688, 1591
Eco24I	GRGCYC	4 cut(s)	259, 270, 342, 1048
Eco31I	GGTCTC	2 cut(s)	129, 2032
Eco47I	GGWCC	4 cut(s)	743, 779, 1689, 1885
Eco53kI	GAGCTC	1 cut(s)	268
Eco57I	CTGAAG	2 cut(s)	1099, 1412
Eco72I	CACGTG	1 cut(s)	1186
Eco88I	CYCGRG	1 cut(s)	701
EcoICRI	GAGCTC	1 cut(s)	268
EcoO109I	RGGNCCY	1 cut(s)	1689
EcoRII	CCWGG	5 cut(s)	48, 802, 1287, 1480, 1887
EcoT14I	CCWWGG	3 cut(s)	249, 688, 1591
EcoT38I	GRGCYC	4 cut(s)	259, 270, 342, 1048
ErhI	CCWWGG	3 cut(s)	249, 688, 1591
FaeI	CATG	9 cut(s)	168, 183, 253, 1475, 1512, 1534, 1568, 1595, 1636
FalI	AAGNNNNNCTT	4 cut(s)	1091, 1123, 1254, 1286
FaqI	GGGAC	2 cut(s)	368, 1675
FatI	CATG	9 cut(s)	164, 179, 249, 1471, 1508, 1530, 1564, 1591, 1632
FauI	CCCGC	1 cut(s)	1649
Fnu4HI	GCNGC	5 cut(s)	29, 1013, 1424, 1453, 2026
FokI	GGATG	3 cut(s)	1076, 1359, 1817
FriOI	GRGCYC	4 cut(s)	259, 270, 342, 1048
Fsp4HI	GCNGC	5 cut(s)	29, 1013, 1424, 1453, 2026
FspBI	CTAG	5 cut(s)	422, 627, 684, 858, 1166
GluI	GCNGC	5 cut(s)	29, 1013, 1424, 1453, 2026
GsuI	CTGGAG	2 cut(s)	1704, 1749
HaeIII	GGCC	1 cut(s)	2081
HapII	CCGG	5 cut(s)	680, 759, 852, 887, 1845
HgaI	GACGC	2 cut(s)	1206, 1674
Hin1I	GRCGYC	2 cut(s)	1217, 1666
Hin1II	CATG	9 cut(s)	168, 183, 253, 1475, 1512, 1534, 1568, 1595, 1636
HindIII	AAGCTT	1 cut(s)	307
HpaII	CCGG	5 cut(s)	680, 759, 852, 887, 1845
HphI	GGTGA	1 cut(s)	1276
Hpy166II	GTNNAC	3 cut(s)	712, 1258, 2020
Hpy188III	TCNNGA	4 cut(s)	701, 1199, 1531, 1766
Hpy8I	GTNNAC	3 cut(s)	712, 1258, 2020
Hpy99I	CGWCG	2 cut(s)	466, 1967
HpyCH4III	ACNGT	1 cut(s)	643
HpyCH4IV	ACGT	5 cut(s)	276, 461, 1185, 1380, 1965
HpyF10VI	GCNNNNNNNGC	8 cut(s)	28, 254, 319, 636, 680, 968, 1679, 2087
HpyF3I	CTNAG	6 cut(s)	128, 206, 485, 500, 1367, 1876
HpySE526I	ACGT	5 cut(s)	276, 461, 1185, 1380, 1965
Hsp92I	GRCGYC	2 cut(s)	1217, 1666
Hsp92II	CATG	9 cut(s)	168, 183, 253, 1475, 1512, 1534, 1568, 1595, 1636
KflI	GGGWCCC	1 cut(s)	1689
Kzo9I	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
LmnI	GCTCC	5 cut(s)	254, 273, 345, 1153, 1768
Lsp1109I	GCAGC	5 cut(s)	15, 999, 1410, 1464, 2037
LweI	GCATC	3 cut(s)	1381, 1947, 2053
MabI	ACCWGGT	1 cut(s)	1887
MaeI	CTAG	5 cut(s)	422, 627, 684, 858, 1166
MaeII	ACGT	5 cut(s)	276, 461, 1185, 1380, 1965
MaeIII	GTNAC	1 cut(s)	1384
MalI	GATC	7 cut(s)	498, 573, 720, 1164, 1197, 1750, 1947
MboI	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
MfeI	CAATTG	1 cut(s)	1356
MflI	RGATCY	2 cut(s)	1748, 1945
MhlI	GDGCHC	5 cut(s)	259, 270, 342, 766, 1048
MlsI	TGGCCA	1 cut(s)	2081
MluNI	TGGCCA	1 cut(s)	2081
MlyI	GAGTC	1 cut(s)	1690
MmeI	TCCRAC	1 cut(s)	177
Mox20I	TGGCCA	1 cut(s)	2081
MroXI	GAANNNNTTC	1 cut(s)	512
MscI	TGGCCA	1 cut(s)	2081
MseI	TTAA	5 cut(s)	284, 444, 1059, 1212, 1785
MslI	CAYNNNNRTG	1 cut(s)	1798
Msp20I	TGGCCA	1 cut(s)	2081
MspA1I	CMGCKG	1 cut(s)	962
MspCI	CTTAAG	1 cut(s)	1211
MspI	CCGG	5 cut(s)	680, 759, 852, 887, 1845
MspR9I	CCNGG	6 cut(s)	50, 680, 804, 1289, 1482, 1889
MunI	CAATTG	1 cut(s)	1356
Mva1269I	GAATGC	1 cut(s)	210
MvaI	CCWGG	5 cut(s)	50, 804, 1289, 1482, 1889
MwoI	GCNNNNNNNGC	8 cut(s)	28, 254, 319, 636, 680, 968, 1679, 2087
NciI	CCSGG	1 cut(s)	680
NcoI	CCATGG	2 cut(s)	249, 1591
NdeII	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
NheI	GCTAGC	1 cut(s)	683
NlaIII	CATG	9 cut(s)	168, 183, 253, 1475, 1512, 1534, 1568, 1595, 1636
NlaIV	GGNNCC	9 cut(s)	256, 341, 817, 1318, 1638, 1690, 1691, 1764, 1873
NspI	RCATGY	1 cut(s)	183
OliI	CACNNNNGTG	1 cut(s)	1798
PagI	TCATGA	1 cut(s)	1530
PcsI	WCGNNNNNNNCGW	1 cut(s)	458
PctI	GAATGC	1 cut(s)	210
PdmI	GAANNNNTTC	1 cut(s)	512
PflMI	CCANNNNNTGG	2 cut(s)	334, 349
PinAI	ACCGGT	1 cut(s)	758
PkrI	GCNGC	5 cut(s)	30, 1014, 1425, 1454, 2027
PleI	GAGTC	1 cut(s)	1690
PmaCI	CACGTG	1 cut(s)	1186
PmlI	CACGTG	1 cut(s)	1186
PpsI	GAGTC	1 cut(s)	1690
Ppu21I	YACGTR	1 cut(s)	1186
PpuMI	RGGWCCY	1 cut(s)	1689
Psp124BI	GAGCTC	1 cut(s)	270
Psp1406I	AACGTT	1 cut(s)	1380
Psp5II	RGGWCCY	1 cut(s)	1689
Psp6I	CCWGG	5 cut(s)	48, 802, 1287, 1480, 1887
PspCI	CACGTG	1 cut(s)	1186
PspGI	CCWGG	5 cut(s)	48, 802, 1287, 1480, 1887
PspN4I	GGNNCC	9 cut(s)	256, 341, 817, 1318, 1638, 1690, 1691, 1764, 1873
PspPI	GGNCC	4 cut(s)	743, 779, 1689, 1885
PspPPI	RGGWCCY	1 cut(s)	1689
PsuI	RGATCY	2 cut(s)	1748, 1945
PvuII	CAGCTG	1 cut(s)	962
RsaI	GTAC	1 cut(s)	302
RsaNI	GTAC	1 cut(s)	301
RseI	CAYNNNNRTG	1 cut(s)	1798
SacI	GAGCTC	1 cut(s)	270
SaqAI	TTAA	5 cut(s)	284, 444, 1059, 1212, 1785
SatI	GCNGC	5 cut(s)	29, 1013, 1424, 1453, 2026
Sau3AI	GATC	7 cut(s)	496, 571, 718, 1162, 1195, 1748, 1945
Sau96I	GGNCC	4 cut(s)	743, 779, 1689, 1885
SchI	GAGTC	1 cut(s)	1690
ScrFI	CCNGG	6 cut(s)	50, 680, 804, 1289, 1482, 1889
SduI	GDGCHC	5 cut(s)	259, 270, 342, 766, 1048
SexAI	ACCWGGT	1 cut(s)	1887
SfaNI	GCATC	3 cut(s)	1381, 1947, 2053
SinI	GGWCC	4 cut(s)	743, 779, 1689, 1885
SmiMI	CAYNNNNRTG	1 cut(s)	1798
SmlI	CTYRAG	2 cut(s)	317, 1211
SmoI	CTYRAG	2 cut(s)	317, 1211
SsiI	CCGC	9 cut(s)	107, 246, 271, 752, 863, 1464, 1502, 1642, 1991
SspMI	CTAG	5 cut(s)	422, 627, 684, 858, 1166
SstI	GAGCTC	1 cut(s)	270
StyD4I	CCNGG	6 cut(s)	48, 678, 802, 1287, 1480, 1887
StyI	CCWWGG	3 cut(s)	249, 688, 1591
TaaI	ACNGT	1 cut(s)	643
TaiI	ACGT	5 cut(s)	279, 464, 1188, 1383, 1968
TaqI	TCGA	8 cut(s)	464, 495, 599, 872, 1034, 1161, 1711, 1833
TaqII	GACCGA	1 cut(s)	2056
Tru1I	TTAA	5 cut(s)	284, 444, 1059, 1212, 1785
Tru9I	TTAA	5 cut(s)	284, 444, 1059, 1212, 1785
TscAI	CASTG	3 cut(s)	523, 646, 1299
TseI	GCWGC	5 cut(s)	28, 1012, 1423, 1452, 2025
TspDTI	ATGAA	6 cut(s)	785, 1080, 1140, 1431, 1460, 1547
TspGWI	ACGGA	3 cut(s)	318, 867, 1358
TspRI	CASTG	3 cut(s)	523, 646, 1299
Van91I	CCANNNNNTGG	2 cut(s)	334, 349
Vha464I	CTTAAG	1 cut(s)	1211
VpaK11BI	GGWCC	4 cut(s)	743, 779, 1689, 1885
XapI	RAATTY	5 cut(s)	364, 436, 587, 1334, 1951
XceI	RCATGY	1 cut(s)	183
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1797
XmnI	GAANNNNTTC	1 cut(s)	512
XspI	CTAG	5 cut(s)	422, 627, 684, 858, 1166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.