Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0012413

Physical Location & Seq

Genomic Coordinates Reverse (-)

61091688 .. 61094830

Gene Structure 3143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG354900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGTTGTATTTTGTTTTGGTGCTTGTGCTTGTCTGCAACACAGATAGTCTAGTGGGTGCTTTGAATGAAGAAGGCCAAGCCCTCTTGTCATTCAAGCAGTCAATTACTCAAGACCCAGAAGGGTCTTTGAGTAATTGGAACTCTTCTGATGCAAATCCTTGTACATGGAATGGGATTACATGCAAGGAGCAAAGAGTTGTGTCCCTTAGCATTCCAAAGAAGAAGCTTTTTGGGCTTCTTCCTTCTGCCATGTGGTCTCTCCCGGACCTCAGACATGTCAATTTAAGGAACAATAAGCTCTATGGGAGCTTGCCCATTGAGCTTTTTGGAGCTTTAGGGTTACAAAGTTTGGTTCTTTATGGGAATTCCTTTTCTGGGTCTGTGCCTAATGTTATTGGGAATCTTAAGTACTTACAAAACTTAGATTTGTCACAAAATTTCTTCAATGGGTCAATGCCTTCTTCAATTGTGCAATGCAAGAGACTCAGAAGTGTGGATCTTAGTCAGAATAATTTCACTGGTTCTCTGCCGGATGGGTTTGGGACTGGCTTGGCTTCTCTGGAAAAGCTTGATCTTTCTTTCAATAAGTTCAATGGCTCAATTCCTAGTGATTTGGGAAATTTGTCTAGCTTGCAAGGCACTGTTGATTTGTCCCATAATCAATTTTCTGGTATAATCCCGGCTAGCCTTGGAAACCTTCCTGAGAAGGTCTACATTGATCTCACTTACAACAATTTAAGCGGTCCTATACCCCAAAATGGTGCTCTAATGAACAGAGGACCAACTGCCTTTATTGGGAATCCTGGTCTCTGTGGCCCTCCATTGAAGAACCCTTGTTCTTCAGAAACTCCTGGTGCAAGTGCACCATCCTTTCCATATCTGCCGGATAATTTGCCTCCTCATGATTCTGATGATAATGCTGGTGAGAGATCGAAAGGTTTAAGTAAGGGAGCTGTGATTGCAATTGTAGTGAGTGACGTGATTGGTATTTGCCTTGTTGGGCTGCTTTTCTCATATTGCTATTCGAGGATTTGTTCTTGTAGTAAGGTTAAGGATGAAAACGGTTATGGGTTTGCAAAGGGTGGCAAGGGGAGGAAAGAGTGCTTGTGCTTCAGGAAAGATGAATCAGAGACTTTATCTGAAAATATGGAGCAGTATGATCTGGTGGCATTGGACACACAAGTGGCATTTGATCTGGATGAGCTTCTTAAGGCTTCTGCTTTTGTTCTTGGGAAGAGTGGAATTGGGATTGTTTACAAAGTTGTGCTTGAAGAAGGACTTACCTTAGCAGTTAGGAGATTGGGTGAAGGGGGCTCTCAGAGATTCAAGGAATTTCAGACAGAAGTTGAAGCAATTGGAAAGCTAAGGCATCCTAATATCGTTACACTAAGGGCTTATTATTGGTCTGTTGATGAGAAGCTGCTGATATATGACTATGTGCCTAATGGCAACCTCGCCGCCGCCATTCATGGAAAGCCAGGAATACTATCATTTACGCCACTATCATGGTCTGTTCGGTTGCAAATCATGAAAGGAATTGCGAAAGGCTTGGTCTACCTGCATGAGTTTAGCCCCAAAAAGTATGTCCATGGAGACTTGAATCCGAGTAACGTACTTCTTGGACATAACATGGAGCCACACATTTCTGATTTTGGACTCGGACGCCTTGCTAATATAGCTGGAGGTACCCCAACTCTGGAATCCAACCGAATGGCCACCATAGACAAACCACAAGAAAGGCACCAAAAGAGCGCATCCATTGAATCTGCTATAGTTTGTTCATCTAGTAATTTGGGATCTTGTTATCAAGCTCCAGAAGCTCTGAAGGTGGTGAAACCATCACAGAAGTGGGATGTCTATTCCTACGGGGTAATCTTACTCGAAATGATTACCGGAAGATTGCCCATAGTCCAAGTGGGTTCCTCAGAAATGGACCTTGTTCATTGGATTCAGCTCTGCATTGACGACAAGAAGCCTCTTTTAGACGTATTAGACCCACATCTAATGCAAGATGTAGAAATGGAAGAAGAGATTATCGCAGTGTTGAAGATTGCAATGGCTTGCGTTCATAGCAGCCCGGAAAGAAGACCAATCATGAGGCATATTTCTGAAGCTTTAGACAGGTTGGCCACACCTGCTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008356 GO:0009505 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022402 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0036211 GO:0042995 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0061640 GO:0071704 GO:0071944 GO:0090406 GO:0120025 GO:0140096 GO:1901564 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

714

Amino Acids

77.74

Weight (kDa)

5.93

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	21 - 61	1.6e-16	Leucine rich repeat N-terminal domain
LRR_14	PF23598	84 - 212	1.2e-08	Leucine-rich repeat region
LRR_8	PF13855	161 - 212	2.7e-06	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	410 - 557	1.3e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	410 - 702	4.5e-27	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	595 - 706	6.3e-07	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01210
fragaria_vesca	FvH4_4g26710
malus_domestica	MD13G1035300.v1.1 MD16G1037100.v1.1
prunus_persica	Prupe.1G316900_v2.0.a1 Prupe.1G316900_v2.0.a1 Prupe.1G316900_v2.0.a1
pyrus_communis	pycom13g03090 pycom16g03210
rosa_chinensis	RchiOBHm_Chr4g0434401
rosa_laevigata	RLG00000006674
rosa_multiflora	Rmu_co8521181.1_g000003
rosa_roxburghii	Rroxscaffold_5G00375760
rosa_rugosa	Rorug04G0276300
rosa_samantha	Rh4AG331900 Rh4BG339700 Rh4CG354900 Rh4DG334900
rosa_wichuraiana	Rw4G028780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1566
Acc65I	GGTACC	1 cut(s)	1685
AccB1I	GGYRCC	2 cut(s)	1685, 1740
AccI	GTMKAC	2 cut(s)	711, 1554
AciI	CCGC	3 cut(s)	741, 1458, 1461
AclWI	GGATC	2 cut(s)	504, 1804
AcoI	YGGCCR	2 cut(s)	1713, 2127
AcsI	RAATTY	4 cut(s)	364, 436, 619, 1331
AcuI	CTGAAG	4 cut(s)	825, 1096, 1844, 2130
AcyI	GRCGYC	1 cut(s)	1663
AfaI	GTAC	4 cut(s)	163, 410, 1614, 1687
AfiI	CCNNNNNNNGG	4 cut(s)	375, 758, 795, 1696
AflII	CTTAAG	2 cut(s)	404, 1208
AflIII	ACRYGT	1 cut(s)	274
AjiI	CACGTC	1 cut(s)	979
AjnI	CCWGG	3 cut(s)	802, 850, 1477
AleI	CACNNNNGTG	2 cut(s)	1181, 1846
Alw21I	GWGCWC	2 cut(s)	766, 865
Alw26I	GTCTC	5 cut(s)	261, 475, 812, 1124, 1587
Alw44I	GTGCAC	1 cut(s)	861
AlwI	GGATC	2 cut(s)	504, 1804
AoxI	GGCC	4 cut(s)	73, 814, 1713, 2127
ApaLI	GTGCAC	1 cut(s)	861
ApeKI	GCWGC	3 cut(s)	1003, 1420, 2073
ApoI	RAATTY	4 cut(s)	364, 436, 619, 1331
ArsI	GACNNNNNNTTYG	2 cut(s)	1569, 1601
Asp700I	GAANNNNTTC	1 cut(s)	512
Asp718I	GGTACC	1 cut(s)	1685
AspLEI	GCGC	1 cut(s)	1754
AspS9I	GGNCC	5 cut(s)	265, 743, 779, 815, 1933
AsuC2I	CCSGG	3 cut(s)	263, 680, 2078
AsuHPI	GGTGA	3 cut(s)	935, 1316, 1843
AsuNHI	GCTAGC	1 cut(s)	683
AvaII	GGWCC	4 cut(s)	265, 743, 779, 1933
BaeGI	GKGCMC	1 cut(s)	865
BalI	TGGCCA	2 cut(s)	1715, 2129
BanI	GGYRCC	2 cut(s)	1685, 1740
BanII	GRGCYC	1 cut(s)	1316
BbsI	GAAGAC	1 cut(s)	2092
Bbv12I	GWGCWC	2 cut(s)	766, 865
BbvI	GCAGC	3 cut(s)	990, 1407, 2085
BccI	CCATC	3 cut(s)	527, 874, 1846
BciT130I	CCWGG	3 cut(s)	804, 852, 1479
BcnI	CCSGG	3 cut(s)	263, 680, 2078
BcoDI	GTCTC	5 cut(s)	261, 475, 812, 1124, 1587
BfaI	CTAG	5 cut(s)	50, 606, 627, 684, 1785
BfmI	CTRYAG	1 cut(s)	1770
BfrI	CTTAAG	2 cut(s)	404, 1208
BfuAI	ACCTGC	1 cut(s)	1566
BisI	GCNGC	5 cut(s)	1004, 1421, 1458, 1461, 2074
BlsI	GCNGC	5 cut(s)	1005, 1422, 1459, 1462, 2075
BmcAI	AGTACT	1 cut(s)	410
Bme1390I	CCNGG	6 cut(s)	263, 680, 804, 852, 1479, 2078
Bme18I	GGWCC	4 cut(s)	265, 743, 779, 1933
BmgBI	CACGTC	1 cut(s)	979
BmgT120I	GGNCC	5 cut(s)	265, 743, 779, 815, 1933
BmiI	GGNNCC	4 cut(s)	1635, 1687, 1742, 1921
BmrFI	CCNGG	6 cut(s)	263, 680, 804, 852, 1479, 2078
BmsI	GCATC	3 cut(s)	139, 1378, 1763
BmtI	GCTAGC	1 cut(s)	687
BpiI	GAAGAC	1 cut(s)	2092
BpmI	CTGGAG	2 cut(s)	1701, 1797
Bpu10I	CCTNAGC	3 cut(s)	206, 1285, 1364
BpuEI	CTTGAG	1 cut(s)	93
BpuMI	CCSGG	3 cut(s)	263, 680, 2078
BsaBI	GATNNNNATC	1 cut(s)	153
BsaHI	GRCGYC	1 cut(s)	1663
BsaI	GGTCTC	2 cut(s)	261, 812
BsaJI	CCNNGG	2 cut(s)	688, 1588
BsaWI	WCCGGW	1 cut(s)	1892
BsaXI	ACNNNNNCTCC	2 cut(s)	1288, 1318
Bsc4I	CCNNNNNNNGG	4 cut(s)	375, 758, 795, 1696
Bse1I	ACTGG	2 cut(s)	523, 550
Bse3DI	GCAATG	2 cut(s)	479, 2061
Bse8I	GATNNNNATC	1 cut(s)	153
BseBI	CCWGG	3 cut(s)	804, 852, 1479
BseDI	CCNNGG	2 cut(s)	688, 1588
BseGI	GGATG	7 cut(s)	538, 866, 1060, 1204, 1369, 1754, 1858
BseJI	GATNNNNATC	1 cut(s)	153
BseLI	CCNNNNNNNGG	4 cut(s)	375, 758, 795, 1696
BseMI	GCAATG	2 cut(s)	479, 2061
BseMII	CTCAG	5 cut(s)	283, 499, 693, 1331, 1938
BseNI	ACTGG	2 cut(s)	523, 550
BseRI	GAGGAG	1 cut(s)	888
BseSI	GKGCMC	1 cut(s)	865
BseXI	GCAGC	3 cut(s)	990, 1407, 2085
BshFI	GGCC	4 cut(s)	75, 816, 1715, 2129
BshNI	GGYRCC	2 cut(s)	1685, 1740
BsiHKAI	GWGCWC	2 cut(s)	766, 865
BsiSI	CCGG	6 cut(s)	263, 530, 680, 884, 1893, 2078
BslFI	GGGAC	3 cut(s)	187, 556, 637
BslI	CCNNNNNNNGG	4 cut(s)	375, 758, 795, 1696
BsmAI	GTCTC	5 cut(s)	261, 475, 812, 1124, 1587
BsmFI	GGGAC	3 cut(s)	187, 556, 637
BsmI	GAATGC	1 cut(s)	210
BsnI	GGCC	4 cut(s)	75, 816, 1715, 2129
Bso31I	GGTCTC	2 cut(s)	261, 812
Bsp1286I	GDGCHC	3 cut(s)	766, 865, 1316
Bsp1407I	TGTACA	1 cut(s)	161
Bsp143I	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
Bsp19I	CCATGG	1 cut(s)	1588
BspACI	CCGC	3 cut(s)	741, 1458, 1461
BspANI	GGCC	4 cut(s)	75, 816, 1715, 2129
BspCNI	CTCAG	5 cut(s)	282, 498, 694, 1330, 1937
BspHI	TCATGA	3 cut(s)	901, 1527, 2094
BspLI	GGNNCC	4 cut(s)	1635, 1687, 1742, 1921
BspMI	ACCTGC	1 cut(s)	1566
BspOI	GCTAGC	1 cut(s)	687
BspPI	GGATC	2 cut(s)	504, 1804
BspT107I	GGYRCC	2 cut(s)	1685, 1740
BspTI	CTTAAG	2 cut(s)	404, 1208
BspTNI	GGTCTC	2 cut(s)	261, 812
BsrDI	GCAATG	2 cut(s)	479, 2061
BsrGI	TGTACA	1 cut(s)	161
BsrI	ACTGG	2 cut(s)	523, 550
BssECI	CCNNGG	2 cut(s)	688, 1588
BssMI	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
BssNI	GRCGYC	1 cut(s)	1663
BssT1I	CCWWGG	2 cut(s)	688, 1588
Bst2UI	CCWGG	3 cut(s)	804, 852, 1479
Bst4CI	ACNGT	2 cut(s)	643, 1064
Bst6I	CTCTTC	3 cut(s)	148, 1229, 2022
BstACI	GRCGYC	1 cut(s)	1663
BstAFI	CTTAAG	2 cut(s)	404, 1208
BstAUI	TGTACA	1 cut(s)	161
BstC8I	GCNNGC	4 cut(s)	311, 632, 685, 2062
BstDSI	CCRYGG	1 cut(s)	1588
BstF5I	GGATG	7 cut(s)	538, 866, 1060, 1204, 1369, 1754, 1858
BstHHI	GCGC	1 cut(s)	1754
BstKTI	GATC	7 cut(s)	499, 574, 721, 932, 1162, 1195, 1799
BstMAI	GTCTC	5 cut(s)	261, 475, 812, 1124, 1587
BstMBI	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
BstMWI	GCNNNNNNNGC	8 cut(s)	232, 319, 636, 959, 1676, 1817, 2070, 2135
BstNI	CCWGG	3 cut(s)	804, 852, 1479
BstNSI	RCATGY	2 cut(s)	183, 278
BstSCI	CCNGG	6 cut(s)	261, 678, 802, 850, 1477, 2076
BstSFI	CTRYAG	1 cut(s)	1770
BstSLI	GKGCMC	1 cut(s)	865
BstV1I	GCAGC	3 cut(s)	990, 1407, 2085
BstV2I	GAAGAC	1 cut(s)	2092
BstX2I	RGATCY	2 cut(s)	496, 1796
BstXI	CCANNNNNNTGG	2 cut(s)	1506, 1711
BstYI	RGATCY	2 cut(s)	496, 1796
BsuRI	GGCC	4 cut(s)	75, 816, 1715, 2129
BtgI	CCRYGG	1 cut(s)	1588
BtrI	CACGTC	1 cut(s)	979
BtsCI	GGATG	7 cut(s)	538, 866, 1060, 1204, 1369, 1754, 1858
BtsI	GCAGTG	1 cut(s)	2046
BtsIMutI	CAGTG	3 cut(s)	516, 639, 2046
BveI	ACCTGC	1 cut(s)	1566
Cac8I	GCNNGC	4 cut(s)	311, 632, 685, 2062
CciI	TCATGA	3 cut(s)	901, 1527, 2094
CfoI	GCGC	1 cut(s)	1754
Cfr13I	GGNCC	5 cut(s)	265, 743, 779, 815, 1933
CseI	GACGC	1 cut(s)	1671
Csp6I	GTAC	4 cut(s)	162, 409, 1613, 1686
CviQI	GTAC	4 cut(s)	162, 409, 1613, 1686
DpnI	GATC	7 cut(s)	498, 573, 720, 931, 1161, 1194, 1798
DpnII	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
EaeI	YGGCCR	2 cut(s)	1713, 2127
Eam1104I	CTCTTC	3 cut(s)	148, 1229, 2022
EarI	CTCTTC	3 cut(s)	148, 1229, 2022
Eco130I	CCWWGG	2 cut(s)	688, 1588
Eco24I	GRGCYC	1 cut(s)	1316
Eco31I	GGTCTC	2 cut(s)	261, 812
Eco47I	GGWCC	4 cut(s)	265, 743, 779, 1933
Eco57I	CTGAAG	4 cut(s)	825, 1096, 1844, 2130
EcoRI	GAATTC	1 cut(s)	364
EcoRII	CCWGG	3 cut(s)	802, 850, 1477
EcoT14I	CCWWGG	2 cut(s)	688, 1588
EcoT38I	GRGCYC	1 cut(s)	1316
ErhI	CCWWGG	2 cut(s)	688, 1588
FalI	AAGNNNNNCTT	4 cut(s)	1251, 1283, 1263, 1295
FaqI	GGGAC	3 cut(s)	187, 556, 637
FblI	GTMKAC	2 cut(s)	711, 1554
Fnu4HI	GCNGC	5 cut(s)	1004, 1421, 1458, 1461, 2074
FokI	GGATG	7 cut(s)	545, 853, 1067, 1211, 1356, 1741, 1865
FriOI	GRGCYC	1 cut(s)	1316
Fsp4HI	GCNGC	5 cut(s)	1004, 1421, 1458, 1461, 2074
FspBI	CTAG	5 cut(s)	50, 606, 627, 684, 1785
GlaI	GCGC	1 cut(s)	1753
GluI	GCNGC	5 cut(s)	1004, 1421, 1458, 1461, 2074
GsuI	CTGGAG	2 cut(s)	1701, 1797
HaeIII	GGCC	4 cut(s)	75, 816, 1715, 2129
HapII	CCGG	6 cut(s)	263, 530, 680, 884, 1893, 2078
HgaI	GACGC	1 cut(s)	1671
HhaI	GCGC	1 cut(s)	1754
Hin1I	GRCGYC	1 cut(s)	1663
Hin6I	GCGC	1 cut(s)	1752
HinP1I	GCGC	1 cut(s)	1752
HindIII	AAGCTT	3 cut(s)	224, 566, 2112
HpaII	CCGG	6 cut(s)	263, 530, 680, 884, 1893, 2078
HphI	GGTGA	3 cut(s)	935, 1316, 1843
Hpy166II	GTNNAC	4 cut(s)	712, 863, 1255, 1555
Hpy8I	GTNNAC	4 cut(s)	712, 863, 1255, 1555
HpyAV	CCTTC	9 cut(s)	65, 113, 252, 468, 700, 707, 1268, 1301, 1819
HpyCH4III	ACNGT	2 cut(s)	643, 1064
HpyCH4IV	ACGT	3 cut(s)	978, 1611, 1986
HpyF10VI	GCNNNNNNNGC	8 cut(s)	232, 319, 636, 959, 1676, 1817, 2070, 2135
HpySE526I	ACGT	3 cut(s)	978, 1611, 1986
Hsp92I	GRCGYC	1 cut(s)	1663
HspAI	GCGC	1 cut(s)	1752
KpnI	GGTACC	1 cut(s)	1689
Kzo9I	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
LmnI	GCTCC	7 cut(s)	187, 306, 329, 950, 1150, 1633, 1816
Lsp1109I	GCAGC	3 cut(s)	990, 1407, 2085
LweI	GCATC	3 cut(s)	139, 1378, 1763
MaeI	CTAG	5 cut(s)	50, 606, 627, 684, 1785
MaeII	ACGT	3 cut(s)	978, 1611, 1986
MaeIII	GTNAC	5 cut(s)	339, 429, 974, 1381, 1607
MalI	GATC	7 cut(s)	498, 573, 720, 931, 1161, 1194, 1798
MboI	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
MfeI	CAATTG	3 cut(s)	465, 963, 1353
MflI	RGATCY	2 cut(s)	496, 1796
MhlI	GDGCHC	3 cut(s)	766, 865, 1316
MlsI	TGGCCA	2 cut(s)	1715, 2129
MluNI	TGGCCA	2 cut(s)	1715, 2129
MlyI	GAGTC	2 cut(s)	477, 1650
MmeI	TCCRAC	1 cut(s)	1728
Mox20I	TGGCCA	2 cut(s)	1715, 2129
MroXI	GAANNNNTTC	1 cut(s)	512
MscI	TGGCCA	2 cut(s)	1715, 2129
MseI	TTAA	6 cut(s)	284, 405, 737, 941, 1050, 1209
MslI	CAYNNNNRTG	3 cut(s)	1181, 1504, 1846
Msp20I	TGGCCA	2 cut(s)	1715, 2129
MspCI	CTTAAG	2 cut(s)	404, 1208
MspI	CCGG	6 cut(s)	263, 530, 680, 884, 1893, 2078
MspR9I	CCNGG	6 cut(s)	263, 680, 804, 852, 1479, 2078
MunI	CAATTG	3 cut(s)	465, 963, 1353
Mva1269I	GAATGC	1 cut(s)	210
MvaI	CCWGG	3 cut(s)	804, 852, 1479
MwoI	GCNNNNNNNGC	8 cut(s)	232, 319, 636, 959, 1676, 1817, 2070, 2135
NciI	CCSGG	3 cut(s)	263, 680, 2078
NcoI	CCATGG	1 cut(s)	1588
NdeII	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
NheI	GCTAGC	1 cut(s)	683
NlaIV	GGNNCC	4 cut(s)	1635, 1687, 1742, 1921
NmuCI	GTSAC	2 cut(s)	429, 974
NspI	RCATGY	2 cut(s)	183, 278
OliI	CACNNNNGTG	2 cut(s)	1181, 1846
PagI	TCATGA	3 cut(s)	901, 1527, 2094
PciI	ACATGT	1 cut(s)	274
PctI	GAATGC	1 cut(s)	210
PdmI	GAANNNNTTC	1 cut(s)	512
PfeI	GAWTC	9 cut(s)	400, 799, 905, 1124, 1323, 1600, 1700, 1763, 1948
PfoI	TCCNGGA	1 cut(s)	261
PkrI	GCNGC	5 cut(s)	1005, 1422, 1459, 1462, 2075
PleI	GAGTC	2 cut(s)	477, 1650
PpsI	GAGTC	2 cut(s)	477, 1650
PscI	ACATGT	1 cut(s)	274
Psp6I	CCWGG	3 cut(s)	802, 850, 1477
PspGI	CCWGG	3 cut(s)	802, 850, 1477
PspN4I	GGNNCC	4 cut(s)	1635, 1687, 1742, 1921
PspPI	GGNCC	5 cut(s)	265, 743, 779, 815, 1933
PsuI	RGATCY	2 cut(s)	496, 1796
RsaI	GTAC	4 cut(s)	163, 410, 1614, 1687
RsaNI	GTAC	4 cut(s)	162, 409, 1613, 1686
RseI	CAYNNNNRTG	3 cut(s)	1181, 1504, 1846
SaqAI	TTAA	6 cut(s)	284, 405, 737, 941, 1050, 1209
SatI	GCNGC	5 cut(s)	1004, 1421, 1458, 1461, 2074
Sau3AI	GATC	7 cut(s)	496, 571, 718, 929, 1159, 1192, 1796
Sau96I	GGNCC	5 cut(s)	265, 743, 779, 815, 1933
ScaI	AGTACT	1 cut(s)	410
SchI	GAGTC	2 cut(s)	477, 1650
ScrFI	CCNGG	6 cut(s)	263, 680, 804, 852, 1479, 2078
SduI	GDGCHC	3 cut(s)	766, 865, 1316
SfaNI	GCATC	3 cut(s)	139, 1378, 1763
SfcI	CTRYAG	1 cut(s)	1770
SinI	GGWCC	4 cut(s)	265, 743, 779, 1933
SmiMI	CAYNNNNRTG	3 cut(s)	1181, 1504, 1846
SmlI	CTYRAG	3 cut(s)	108, 404, 1208
SmoI	CTYRAG	3 cut(s)	108, 404, 1208
SsiI	CCGC	3 cut(s)	741, 1458, 1461
SspMI	CTAG	5 cut(s)	50, 606, 627, 684, 1785
StyD4I	CCNGG	6 cut(s)	261, 678, 802, 850, 1477, 2076
StyI	CCWWGG	2 cut(s)	688, 1588
TaaI	ACNGT	2 cut(s)	643, 1064
TaiI	ACGT	3 cut(s)	981, 1614, 1989
TaqI	TCGA	3 cut(s)	932, 1025, 1881
TatI	WGTACW	2 cut(s)	161, 408
TauI	GCSGC	2 cut(s)	1460, 1463
TfiI	GAWTC	9 cut(s)	400, 799, 905, 1124, 1323, 1600, 1700, 1763, 1948
Tru1I	TTAA	6 cut(s)	284, 405, 737, 941, 1050, 1209
Tru9I	TTAA	6 cut(s)	284, 405, 737, 941, 1050, 1209
TscAI	CASTG	3 cut(s)	523, 646, 2046
TseFI	GTSAC	2 cut(s)	429, 974
TseI	GCWGC	3 cut(s)	1003, 1420, 2073
Tsp45I	GTSAC	2 cut(s)	429, 974
TspDTI	ATGAA	9 cut(s)	81, 785, 1071, 1137, 1457, 1544, 1770, 1931, 2057
TspRI	CASTG	3 cut(s)	523, 646, 2046
Vha464I	CTTAAG	2 cut(s)	404, 1208
VneI	GTGCAC	1 cut(s)	861
VpaK11BI	GGWCC	4 cut(s)	265, 743, 779, 1933
XapI	RAATTY	4 cut(s)	364, 436, 619, 1331
XceI	RCATGY	2 cut(s)	183, 278
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1845, 1912
XmiI	GTMKAC	2 cut(s)	711, 1554
XmnI	GAANNNNTTC	1 cut(s)	512
XspI	CTAG	5 cut(s)	50, 606, 627, 684, 1785
ZrmI	AGTACT	1 cut(s)	410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.