Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0009879

Physical Location & Seq

Genomic Coordinates Reverse (-)

4089603 .. 4096184

Gene Structure 6582 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1057000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGAAATTAGGACGGAAGGTAAAGCTTTGTGCTTTGTGGCATTTTTCTGCTTTTGGACTTCTGCAACTGGTTTGCTTTCTCCAAAGGGTGTTAACTATGAAGTGCAAGCATTGGTGAGCATTAGAGAAGCTCTCAAGGATCCTCGCGGCGTTCTTCGAAATTGGGATGGAACTTCTGTTGATCCCTGCATCTGGAACATGGTTACTTGTTCTCTTGATGGCTTAGTCATTGGCCTGGGAACTCCAAGCCAGAATTTATCAGGCACTTTGTCACCAAGCATTGGAAACTTGACAAATCTCCAGCTTGTTACATTTCAGGATAATCATATAACAGGATCGATCCCCGCCGAGCTCGGGAGGCTCCAAAAGCTTCAAACACTTGATCTCTCCAGCAACTTGTTCAATGGAGAAATTCCCAGCACTCTATCACACCTGAAAAGCCTACAATACCTGCGGCTAAACAATAACACTCTCTCTGGGGCAATTCCTTCATCATTTGCTAATATGACCCAGCTGGCATTTCTGGACATGTCTTATAATAATTTGAGTGGTCCGGTCCCAAGGTTTCCTGCTAAAACATTCAACGTTGTGGGAAACCCTCTGATATGTGCCACCGGAAAGGAGCAAGACTGCTCCGGCACGACACGACCGCCGCTATCTTTGCCCTCGAATAATTCAACAAATTCTCAAGCCGCCGAGAGACCTAGGAGCCACAAAATCGCCTTAGCGTTTGCCTCGAGCCTTGGCTGCATCTGCCTTCTAATTCTTGGTTTTGGTTTCCTTCTTTGGTGGAGGCAGAAACACAACAAGCAAATATTCTTAGATGTTACCGAACAACATCACGAAGAAGTTTGCCTTGGAAACTTGAGGTCGTTTCACTTCAGAGAACTTCAAGCAGCAACACACAACTTCAGCAGCAAAAACTTGGTTGGTAAGGGTGGTTTCGGGAATGTCTACAAAGGATATCTCCGAGATGGTACAGTAATAGCAGTCAAAAGGCTCAAGGACACGAATGCCATAGGTGGGGAAATCCAATTTCAGACCGAACTTGAGATGATCAGCCTCGCTGTGCACAGGAACCTCCTCCGGCTTTATGGTTTTTGCATGACAGCCAAAGAGAGGCTTTTGGTTTATCCTTACATGTCTAACGGAAGTGTTGCTTCACGTCTCAAAGCCAAGCCACCCCTGGATTGGAGTACAAGGAAAAGGATTGCATTGGGAGCTGGAAGGGGACTATTGTACTTGCATGAGCAGTGTGACCCCAAGATCATTCACCGTGATGTGAAGGCTGCGAATATTCTGCTAGATGATTACTGCGAGGCTGTTGTTGGAGATTTTGGGTTGGCAAAGCTGTTGGATCACCATGATTCACACATTACAACCGCTGTTAGGGGCACCGTGGGGCACATTGCCCCGGAGTACCTCTCAACAGGCCAGTCCTCTGAGAAGACTGATGTTTTCGGGTTTGGTATCCTCATACTCGAACTAATATCTGGACAAAGAGCTCTTGAGTTTGGGAAAGCAGCAAACCAGAAAGGGGCAATACTTGACTGGGTGAAGAAAATCCAACAGGAAAAGAAGTTTGATGTGCTGGTTGGCAAGGAACTGAAAAATGACTATGATCCAATAGAGGTCGAAGAAATGATTCAAGTAGCTCTCTTGTGCACTCAAAATCTTCCTAGCCAGAGACCAAAGATGTCTGAAGTGGTTCGAATGCTTGAAGGAGATGGACTTGCGGAGAAATGGGAGGCTTCTCAGAGAGCTGAATCTAATAGGTGCAGAGCCAATGAGTTTTCCTCCTCGGAACGGTACTCTGATCTTACCGATGACTCTTCATTGCTTGCACAAGCAATGGAGCTGTCTGGACCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

625

Amino Acids

68.9

Weight (kDa)

7.88

Isoelectric Point (pI)

38.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 71	4.2e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	93 - 177	2.9e-11	Leucine-rich repeat region
LRR_8	PF13855	139 - 182	2.7e-07	Leucine rich repeat
Pkinase	PF00069	305 - 571	3.5e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	307 - 573	2.6e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25560 AT3G25560 AT3G25560
fragaria_vesca	FvH4_4g28660 FvH4_4g28660 FvH4_4g28660
malus_domestica	MD13G1052700.v1.1 MD16G1057000.v1.1
prunus_persica	Prupe.1G299300_v2.0.a1
pyrus_communis	pycom13g04720 pycom16g05010
rosa_chinensis	RchiOBHm_Chr4g0436771
rosa_laevigata	RLG00000006497
rosa_multiflora	Rmu_sc0001837.1_g000004
rosa_roxburghii	Rroxscaffold_5G00377840
rosa_rugosa	Rorug04G0296000
rosa_samantha	Rh4AG350400 Rh4BG359300 Rh4CG373600 Rh4DG353300
rosa_wichuraiana	Rw4G030660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	537
Acc36I	ACCTGC	1 cut(s)	459
AccB1I	GGYRCC	1 cut(s)	1394
AccB7I	CCANNNNNTGG	1 cut(s)	281
AccI	GTMKAC	1 cut(s)	954
AccII	CGCG	1 cut(s)	147
AciI	CCGC	8 cut(s)	147, 345, 454, 650, 653, 693, 1383, 1736
AclI	AACGTT	1 cut(s)	585
AclWI	GGATC	7 cut(s)	134, 147, 176, 334, 343, 1365, 1616
AcsI	RAATTY	3 cut(s)	253, 411, 682
AcuI	CTGAAG	3 cut(s)	865, 895, 1722
AfaI	GTAC	5 cut(s)	979, 1198, 1241, 1421, 1811
AfiI	CCNNNNNNNGG	9 cut(s)	192, 281, 354, 1023, 1119, 1191, 1389, 1537, 1806
AflIII	ACRYGT	2 cut(s)	528, 1140
AgsI	TTSAA	7 cut(s)	374, 403, 583, 678, 893, 1649, 1721
AjiI	CACGTC	1 cut(s)	1166
AjnI	CCWGG	2 cut(s)	234, 1185
AjuI	GAANNNNNNNTTGG	2 cut(s)	840, 872
Alw21I	GWGCWC	4 cut(s)	354, 1074, 1507, 1667
Alw26I	GTCTC	3 cut(s)	694, 1172, 1681
Alw44I	GTGCAC	2 cut(s)	1070, 1663
AlwI	GGATC	7 cut(s)	134, 147, 176, 334, 343, 1365, 1616
Ama87I	CYCGRG	2 cut(s)	353, 736
AoxI	GGCC	2 cut(s)	232, 1432
ApaLI	GTGCAC	2 cut(s)	1070, 1663
ApeKI	GCWGC	5 cut(s)	747, 896, 915, 1289, 1523
ApoI	RAATTY	3 cut(s)	253, 411, 682
Asp700I	GAANNNNTTC	2 cut(s)	1644, 1707
AspA2I	CCTAGG	1 cut(s)	704
AspS9I	GGNCC	3 cut(s)	551, 556, 1865
AsuC2I	CCSGG	1 cut(s)	1415
AsuHPI	GGTGA	5 cut(s)	127, 264, 1265, 1352, 1567
AsuII	TTCGAA	2 cut(s)	157, 1711
AvaI	CYCGRG	2 cut(s)	353, 736
AvaII	GGWCC	3 cut(s)	551, 556, 1865
AvrII	CCTAGG	1 cut(s)	704
BaeGI	GKGCMC	4 cut(s)	1074, 1397, 1407, 1667
BamHI	GGATCC	1 cut(s)	139
BanI	GGYRCC	1 cut(s)	1394
BanII	GRGCYC	2 cut(s)	354, 1507
BbsI	GAAGAC	1 cut(s)	1454
Bbv12I	GWGCWC	4 cut(s)	354, 1074, 1507, 1667
BbvI	GCAGC	5 cut(s)	734, 908, 927, 1276, 1535
BccI	CCATC	4 cut(s)	161, 212, 968, 1721
BcgI	CGANNNNNNTGC	2 cut(s)	1282, 1316
BciT130I	CCWGG	2 cut(s)	236, 1187
BciVI	GTATCC	1 cut(s)	1481
BclI	TGATCA	1 cut(s)	1056
BcnI	CCSGG	1 cut(s)	1415
BcoDI	GTCTC	3 cut(s)	694, 1172, 1681
BfaI	CTAG	3 cut(s)	705, 1304, 1680
BfuAI	ACCTGC	1 cut(s)	459
BfuI	GTATCC	1 cut(s)	1481
BisI	GCNGC	9 cut(s)	148, 455, 653, 693, 748, 897, 916, 1290, 1524
BlnI	CCTAGG	1 cut(s)	704
BlsI	GCNGC	9 cut(s)	149, 456, 654, 694, 749, 898, 917, 1291, 1525
Bme1390I	CCNGG	3 cut(s)	236, 1187, 1415
Bme18I	GGWCC	3 cut(s)	551, 556, 1865
BmeT110I	CYCGRG	2 cut(s)	353, 736
BmgBI	CACGTC	1 cut(s)	1166
BmgT120I	GGNCC	3 cut(s)	551, 556, 1865
BmiI	GGNNCC	6 cut(s)	141, 362, 558, 710, 1079, 1396
BmrFI	CCNGG	3 cut(s)	236, 1187, 1415
BmrI	ACTGGG	1 cut(s)	1561
BmsI	GCATC	2 cut(s)	198, 759
BmuI	ACTGGG	1 cut(s)	1561
BpiI	GAAGAC	1 cut(s)	1454
BplI	GAGNNNNNCTC	6 cut(s)	117, 149, 1409, 1441, 1781, 1813
BpmI	CTGGAG	2 cut(s)	284, 373
Bpu10I	CCTNAGC	1 cut(s)	724
Bpu14I	TTCGAA	2 cut(s)	157, 1711
BpuEI	CTTGAG	6 cut(s)	119, 672, 886, 986, 1070, 1529
BpuMI	CCSGG	1 cut(s)	1415
Bsa29I	ATCGAT	1 cut(s)	338
BsaI	GGTCTC	2 cut(s)	694, 1681
BsaJI	CCNNGG	9 cut(s)	235, 560, 704, 742, 856, 1185, 1398, 1413, 1800
BsaWI	WCCGGW	2 cut(s)	553, 614
Bsc4I	CCNNNNNNNGG	9 cut(s)	192, 281, 354, 1023, 1119, 1191, 1389, 1537, 1806
Bse1I	ACTGG	3 cut(s)	73, 1435, 1556
Bse3DI	GCAATG	3 cut(s)	1407, 1835, 1857
BseBI	CCWGG	2 cut(s)	236, 1187
BseCI	ATCGAT	1 cut(s)	338
BseDI	CCNNGG	9 cut(s)	235, 560, 704, 742, 856, 1185, 1398, 1413, 1800
BseGI	GGATG	1 cut(s)	172
BseLI	CCNNNNNNNGG	9 cut(s)	192, 281, 354, 1023, 1119, 1191, 1389, 1537, 1806
BseMI	GCAATG	3 cut(s)	1407, 1835, 1857
BseMII	CTCAG	2 cut(s)	1434, 1769
BseNI	ACTGG	3 cut(s)	73, 1435, 1556
BseRI	GAGGAG	2 cut(s)	1073, 1789
BseSI	GKGCMC	4 cut(s)	1074, 1397, 1407, 1667
BseXI	GCAGC	5 cut(s)	734, 908, 927, 1276, 1535
BseYI	CCCAGC	2 cut(s)	416, 510
BsgI	GTGCAG	1 cut(s)	1798
Bsh1236I	CGCG	1 cut(s)	147
Bsh1285I	CGRYCG	1 cut(s)	650
BshFI	GGCC	2 cut(s)	234, 1434
BshNI	GGYRCC	1 cut(s)	1394
BshVI	ATCGAT	1 cut(s)	338
BsiEI	CGRYCG	1 cut(s)	650
BsiHKAI	GWGCWC	4 cut(s)	354, 1074, 1507, 1667
BsiHKCI	CYCGRG	2 cut(s)	353, 736
BsiSI	CCGG	5 cut(s)	554, 615, 636, 1087, 1415
BslFI	GGGAC	2 cut(s)	542, 1245
BslI	CCNNNNNNNGG	9 cut(s)	192, 281, 354, 1023, 1119, 1191, 1389, 1537, 1806
BsmAI	GTCTC	3 cut(s)	694, 1172, 1681
BsmBI	CGTCTC	1 cut(s)	1172
BsmFI	GGGAC	2 cut(s)	542, 1245
BsmI	GAATGC	2 cut(s)	1018, 1719
BsnI	GGCC	2 cut(s)	234, 1434
Bso31I	GGTCTC	2 cut(s)	694, 1681
BsoBI	CYCGRG	2 cut(s)	353, 736
Bsp119I	TTCGAA	2 cut(s)	157, 1711
Bsp1286I	GDGCHC	6 cut(s)	354, 1074, 1397, 1407, 1507, 1667
BspACI	CCGC	8 cut(s)	147, 345, 454, 650, 653, 693, 1383, 1736
BspANI	GGCC	2 cut(s)	234, 1434
BspCNI	CTCAG	2 cut(s)	1435, 1768
BspDI	ATCGAT	1 cut(s)	338
BspFNI	CGCG	1 cut(s)	147
BspLI	GGNNCC	6 cut(s)	141, 362, 558, 710, 1079, 1396
BspMI	ACCTGC	1 cut(s)	459
BspPI	GGATC	7 cut(s)	134, 147, 176, 334, 343, 1365, 1616
BspT104I	TTCGAA	2 cut(s)	157, 1711
BspT107I	GGYRCC	1 cut(s)	1394
BspTNI	GGTCTC	2 cut(s)	694, 1681
BsrDI	GCAATG	3 cut(s)	1407, 1835, 1857
BsrI	ACTGG	3 cut(s)	73, 1435, 1556
BssECI	CCNNGG	9 cut(s)	235, 560, 704, 742, 856, 1185, 1398, 1413, 1800
BssT1I	CCWWGG	4 cut(s)	560, 704, 742, 856
Bst2UI	CCWGG	2 cut(s)	236, 1187
Bst4CI	ACNGT	4 cut(s)	982, 1277, 1399, 1809
Bst6I	CTCTTC	1 cut(s)	1837
BstBI	TTCGAA	2 cut(s)	157, 1711
BstC8I	GCNNGC	3 cut(s)	108, 516, 1842
BstDEI	CTNAG	5 cut(s)	223, 724, 820, 1443, 1755
BstDSI	CCRYGG	1 cut(s)	1398
BstF5I	GGATG	1 cut(s)	172
BstFNI	CGCG	1 cut(s)	147
BstMAI	GTCTC	3 cut(s)	694, 1172, 1681
BstMCI	CGRYCG	1 cut(s)	650
BstMWI	GCNNNNNNNGC	6 cut(s)	358, 367, 661, 747, 753, 1220
BstNI	CCWGG	2 cut(s)	236, 1187
BstNSI	RCATGY	2 cut(s)	532, 1144
BstSCI	CCNGG	3 cut(s)	234, 1185, 1413
BstSLI	GKGCMC	4 cut(s)	1074, 1397, 1407, 1667
BstUI	CGCG	1 cut(s)	147
BstV1I	GCAGC	5 cut(s)	734, 908, 927, 1276, 1535
BstV2I	GAAGAC	1 cut(s)	1454
BstX2I	RGATCY	1 cut(s)	139
BstYI	RGATCY	1 cut(s)	139
Bsu15I	ATCGAT	1 cut(s)	338
BsuI	GTATCC	1 cut(s)	1481
BsuRI	GGCC	2 cut(s)	234, 1434
BsuTUI	ATCGAT	1 cut(s)	338
BtgI	CCRYGG	1 cut(s)	1398
BtrI	CACGTC	1 cut(s)	1166
BtsCI	GGATG	1 cut(s)	172
BtsI	GCAGTG	1 cut(s)	1259
BtsIMutI	CAGTG	1 cut(s)	1259
BveI	ACCTGC	1 cut(s)	459
Cac8I	GCNNGC	3 cut(s)	108, 516, 1842
Cfr13I	GGNCC	3 cut(s)	551, 556, 1865
ClaI	ATCGAT	1 cut(s)	338
Csp6I	GTAC	5 cut(s)	978, 1197, 1240, 1420, 1810
CviAII	CATG	6 cut(s)	199, 529, 1105, 1141, 1247, 1364
CviQI	GTAC	5 cut(s)	978, 1197, 1240, 1420, 1810
DdeI	CTNAG	5 cut(s)	223, 724, 820, 1443, 1755
Eam1104I	CTCTTC	1 cut(s)	1837
EarI	CTCTTC	1 cut(s)	1837
Ecl136II	GAGCTC	2 cut(s)	352, 1505
Eco130I	CCWWGG	4 cut(s)	560, 704, 742, 856
Eco24I	GRGCYC	2 cut(s)	354, 1507
Eco31I	GGTCTC	2 cut(s)	694, 1681
Eco32I	GATATC	1 cut(s)	965
Eco47I	GGWCC	3 cut(s)	551, 556, 1865
Eco53kI	GAGCTC	2 cut(s)	352, 1505
Eco57I	CTGAAG	3 cut(s)	865, 895, 1722
Eco88I	CYCGRG	2 cut(s)	353, 736
EcoICRI	GAGCTC	2 cut(s)	352, 1505
EcoRII	CCWGG	2 cut(s)	234, 1185
EcoRV	GATATC	1 cut(s)	965
EcoT14I	CCWWGG	4 cut(s)	560, 704, 742, 856
EcoT38I	GRGCYC	2 cut(s)	354, 1507
ErhI	CCWWGG	4 cut(s)	560, 704, 742, 856
Esp3I	CGTCTC	1 cut(s)	1172
FaeI	CATG	6 cut(s)	202, 532, 1108, 1144, 1250, 1367
FalI	AAGNNNNNCTT	6 cut(s)	840, 872, 1107, 1139, 1144, 1176
FaqI	GGGAC	2 cut(s)	542, 1245
FatI	CATG	6 cut(s)	198, 528, 1104, 1140, 1246, 1363
FauI	CCCGC	1 cut(s)	352
FbaI	TGATCA	1 cut(s)	1056
FblI	GTMKAC	1 cut(s)	954
Fnu4HI	GCNGC	9 cut(s)	148, 455, 653, 693, 748, 897, 916, 1290, 1524
FokI	GGATG	1 cut(s)	179
FriOI	GRGCYC	2 cut(s)	354, 1507
Fsp4HI	GCNGC	9 cut(s)	148, 455, 653, 693, 748, 897, 916, 1290, 1524
FspBI	CTAG	3 cut(s)	705, 1304, 1680
GluI	GCNGC	9 cut(s)	148, 455, 653, 693, 748, 897, 916, 1290, 1524
GsaI	CCCAGC	2 cut(s)	420, 514
GsuI	CTGGAG	2 cut(s)	284, 373
HaeIII	GGCC	2 cut(s)	234, 1434
HapII	CCGG	5 cut(s)	554, 615, 636, 1087, 1415
Hin1II	CATG	6 cut(s)	202, 532, 1108, 1144, 1250, 1367
HincII	GTYRAC	1 cut(s)	94
HindII	GTYRAC	1 cut(s)	94
HindIII	AAGCTT	2 cut(s)	24, 368
HinfI	GANTC	4 cut(s)	1367, 1645, 1766, 1829
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	5 cut(s)	554, 615, 636, 1087, 1415
HphI	GGTGA	5 cut(s)	127, 264, 1265, 1352, 1567
Hpy166II	GTNNAC	4 cut(s)	94, 955, 1072, 1665
Hpy188I	TCNGA	9 cut(s)	603, 884, 971, 1041, 1444, 1702, 1758, 1804, 1816
Hpy8I	GTNNAC	4 cut(s)	94, 955, 1072, 1665
HpyAV	CCTTC	7 cut(s)	11, 498, 767, 791, 1221, 1279, 1715
HpyCH4III	ACNGT	4 cut(s)	982, 1277, 1399, 1809
HpyCH4IV	ACGT	2 cut(s)	585, 1165
HpyF10VI	GCNNNNNNNGC	6 cut(s)	358, 367, 661, 747, 753, 1220
HpyF3I	CTNAG	5 cut(s)	223, 724, 820, 1443, 1755
HpySE526I	ACGT	2 cut(s)	585, 1165
Hsp92II	CATG	6 cut(s)	202, 532, 1108, 1144, 1250, 1367
Ksp22I	TGATCA	1 cut(s)	1056
KspAI	GTTAAC	1 cut(s)	94
LmnI	GCTCC	6 cut(s)	366, 622, 638, 708, 1220, 1855
Lsp1109I	GCAGC	5 cut(s)	734, 908, 927, 1276, 1535
LweI	GCATC	2 cut(s)	198, 759
MaeI	CTAG	3 cut(s)	705, 1304, 1680
MaeII	ACGT	2 cut(s)	585, 1165
MaeIII	GTNAC	5 cut(s)	202, 270, 307, 826, 1256
MboII	GAAGA	7 cut(s)	146, 857, 1459, 1570, 1649, 1667, 1824
MflI	RGATCY	1 cut(s)	139
MhlI	GDGCHC	6 cut(s)	354, 1074, 1397, 1407, 1507, 1667
MlyI	GAGTC	1 cut(s)	1823
MmeI	TCCRAC	3 cut(s)	1309, 1335, 1591
MroXI	GAANNNNTTC	2 cut(s)	1644, 1707
MseI	TTAA	1 cut(s)	93
MslI	CAYNNNNRTG	1 cut(s)	1278
MspA1I	CMGCKG	2 cut(s)	514, 1385
MspI	CCGG	5 cut(s)	554, 615, 636, 1087, 1415
MspR9I	CCNGG	3 cut(s)	236, 1187, 1415
Mva1269I	GAATGC	2 cut(s)	1018, 1719
MvaI	CCWGG	2 cut(s)	236, 1187
MvnI	CGCG	1 cut(s)	147
MwoI	GCNNNNNNNGC	6 cut(s)	358, 367, 661, 747, 753, 1220
NciI	CCSGG	1 cut(s)	1415
NlaIII	CATG	6 cut(s)	202, 532, 1108, 1144, 1250, 1367
NlaIV	GGNNCC	6 cut(s)	141, 362, 558, 710, 1079, 1396
NmeAIII	GCCGAG	2 cut(s)	373, 721
NmuCI	GTSAC	2 cut(s)	270, 1256
NspI	RCATGY	2 cut(s)	532, 1144
NspV	TTCGAA	2 cut(s)	157, 1711
PaeR7I	CTCGAG	1 cut(s)	736
PciI	ACATGT	2 cut(s)	528, 1140
PctI	GAATGC	2 cut(s)	1018, 1719
PdmI	GAANNNNTTC	2 cut(s)	1644, 1707
PfeI	GAWTC	3 cut(s)	1367, 1645, 1766
PflMI	CCANNNNNTGG	1 cut(s)	281
PkrI	GCNGC	9 cut(s)	149, 456, 654, 694, 749, 898, 917, 1291, 1525
PleI	GAGTC	1 cut(s)	1823
PpsI	GAGTC	1 cut(s)	1823
PscI	ACATGT	2 cut(s)	528, 1140
PsiI	TTATAA	1 cut(s)	537
Psp124BI	GAGCTC	2 cut(s)	354, 1507
Psp1406I	AACGTT	1 cut(s)	585
Psp6I	CCWGG	2 cut(s)	234, 1185
PspFI	CCCAGC	2 cut(s)	416, 510
PspGI	CCWGG	2 cut(s)	234, 1185
PspN4I	GGNNCC	6 cut(s)	141, 362, 558, 710, 1079, 1396
PspPI	GGNCC	3 cut(s)	551, 556, 1865
PspXI	VCTCGAGB	1 cut(s)	736
PsuI	RGATCY	1 cut(s)	139
PvuII	CAGCTG	1 cut(s)	514
RsaI	GTAC	5 cut(s)	979, 1198, 1241, 1421, 1811
RsaNI	GTAC	5 cut(s)	978, 1197, 1240, 1420, 1810
RseI	CAYNNNNRTG	1 cut(s)	1278
SacI	GAGCTC	2 cut(s)	354, 1507
SaqAI	TTAA	1 cut(s)	93
SatI	GCNGC	9 cut(s)	148, 455, 653, 693, 748, 897, 916, 1290, 1524
Sau96I	GGNCC	3 cut(s)	551, 556, 1865
SchI	GAGTC	1 cut(s)	1823
ScrFI	CCNGG	3 cut(s)	236, 1187, 1415
SduI	GDGCHC	6 cut(s)	354, 1074, 1397, 1407, 1507, 1667
SfaNI	GCATC	2 cut(s)	198, 759
Sfr274I	CTCGAG	1 cut(s)	736
SfuI	TTCGAA	2 cut(s)	157, 1711
SinI	GGWCC	3 cut(s)	551, 556, 1865
SlaI	CTCGAG	1 cut(s)	736
SmiMI	CAYNNNNRTG	1 cut(s)	1278
SmlI	CTYRAG	7 cut(s)	134, 687, 736, 865, 1001, 1049, 1508
SmoI	CTYRAG	7 cut(s)	134, 687, 736, 865, 1001, 1049, 1508
SsiI	CCGC	8 cut(s)	147, 345, 454, 650, 653, 693, 1383, 1736
SspI	AATATT	2 cut(s)	816, 1297
SspMI	CTAG	3 cut(s)	705, 1304, 1680
SstI	GAGCTC	2 cut(s)	354, 1507
StyD4I	CCNGG	3 cut(s)	234, 1185, 1413
StyI	CCWWGG	4 cut(s)	560, 704, 742, 856
TaaI	ACNGT	4 cut(s)	982, 1277, 1399, 1809
TaiI	ACGT	2 cut(s)	588, 1168
TaqI	TCGA	7 cut(s)	157, 338, 668, 737, 1482, 1635, 1711
TaqII	GACCGA	1 cut(s)	1058
TatI	WGTACW	2 cut(s)	1196, 1239
TauI	GCSGC	4 cut(s)	150, 457, 655, 695
TfiI	GAWTC	3 cut(s)	1367, 1645, 1766
Tru1I	TTAA	1 cut(s)	93
Tru9I	TTAA	1 cut(s)	93
TscAI	CASTG	1 cut(s)	1259
TseFI	GTSAC	2 cut(s)	270, 1256
TseI	GCWGC	5 cut(s)	747, 896, 915, 1289, 1523
Tsp45I	GTSAC	2 cut(s)	270, 1256
TspDTI	ATGAA	3 cut(s)	114, 480, 1824
TspGWI	ACGGA	2 cut(s)	29, 1164
TspRI	CASTG	1 cut(s)	1259
Van91I	CCANNNNNTGG	1 cut(s)	281
VneI	GTGCAC	2 cut(s)	1070, 1663
VpaK11BI	GGWCC	3 cut(s)	551, 556, 1865
XapI	RAATTY	3 cut(s)	253, 411, 682
XceI	RCATGY	2 cut(s)	532, 1144
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1183, 1188
XhoI	CTCGAG	1 cut(s)	736
XmaJI	CCTAGG	1 cut(s)	704
XmiI	GTMKAC	1 cut(s)	954
XmnI	GAANNNNTTC	2 cut(s)	1644, 1707
XspI	CTAG	3 cut(s)	705, 1304, 1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.