MD16G1118600.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0015603
Physical Location & Seq
Forward (+)
8443458 .. 8446470
3013 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1118600.v1.1.491

Sequence Viewer

Length: 1599 bp
ATGGTTATAGTTATGAAACTCTTCGTGCTAGCCAACCTTTCAATCTTAGTCTTTTGGTTTGGAGGTACGACGTCGTACTCAAACTCTCTCACTCTCACTCTCTTCCTCCTCTCATTCTTCTACTGTTTCCTTGTCTCTCTATGCCACTACCTTGTCCCTGGAGGTTTTGCATGGTCATGTTACAGTCATACCCAAAATTCTCAAAACGGTTCCAGCCTCCGGGGACCAGCTGGGTGGCCTATTCTAGGATTCCTACCCCATCATATGGGTTCTCTTGCCCACCAAAAACTCTCCACTATGGCAACTTCACTCAAGGCAACAAGGCTCATGGCATTCAGCTTAGGCACTACTCGTGTCATCATCAGCAGCCATCCTGACACTGCTAGGCAAATCCTAGGAGGCTCGTCATTTTCCGACCGTCCGATCAAGCAATCAGCTAAGTTGCTAATGTTTGAGCGTGCCATAGGGTTTGCTCCTTCAGGAACGTATTGGCGCCACCTGCGCAGGATAGCAGCTGTCCATATGTTTTCACCAAAGAGAATCGGAGGCCTAGAAACCGTAAGGCAAAAAGTGGCCGATGAAATGGTGGTGACAATTTGGGATGAGATGAAGGAAAATAGGGTTGTGGGATTAAAAGCAATATTGCAAAAGGGTTCTTTGGATAACATAATCCAGAGTGTTTTTGGCACTAGTTATTTAGGTTTAGAGAAGGAGGTGACTACTAATCTAACGTTAATGTTGCTAGTTAAACAAGGGTACGACTTGATTTCTAGGTTTAATTTGGAGGATTATTTTCCCTTGAGGTTTTTGGACTTTTATGGTGTGAAGAGGAAGTGTCACAAATTGGCGGCTGAGGTGAAGTGTGTGGTGGGGCAAATTGTGAGGGAAAGAAAAAGAGCAGGAGATTTCGGTGGCGGCAGTGACTTTCTCAGTGCCTTGCTAGCTTTGCCGGAAGAAGATAAACTAAATGATTCAGACACGGTGGCTGTTTTGTGGGAAATGATATTTCGAGGGACAGACACGGTTGCAATACTTCTGGAGTGGATTATGGCAAGGATGGTCTTACACCAAGACATCCAAGCCAAAGCACAACAAGAACTTGACACACACGTGGGGAACAATAGGCACGTGCGAGACTCCGACCTTCCAAACCTGTCTTATCTACAAGCCATAGTCAAGGAAGTTCTCCGAATGCACCCTCCGGGCCCATTGCTGTCATGGGCCCGTCTTGCGGTCCATGATGTCCATGTGGACAAGGTCTTTATCCCAGCTGGCACAACTGCGATGGTCAATATGTGGGCCATAACCCACGACCCATCCATCTGGAAGGACCCGATGGTGTTTAGGCCTGAGAGGTTCATCGAGGAGGATGTGTTAATAATGGGCTCGGACCTCAAGCTCGCACCATTTGGATCTGGTCGGAGAGTATGCCCAGGCAAAGCGTTGGGTTTAGCTACCGTGCATTTGTGGCTTGCTAGGCTTTTGCACCAATTCAAATGGTTACCGACGGAGCCTGTAGACCTTTCAGAGTGTTTGAGGCTCTCTCTCGAAATGAAGAAACCACTCACATGCCGTGTCGTCCCACGCAATGCATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00232 ko00380 ko00591 ko00830 ko00980 ko00982 ko01100 ko01110 ko05204 map00140 map00232 map00380 map00591 map00830 map00980 map00982 map01100 map01110 map05204
Pfam Domains
Protein Families
p450

Protein Analysis

533

Amino Acids

59.8

Weight (kDa)

9.27

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 74 - 508 5.2e-81 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015603)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g23820
malus_domestica MD13G1118500.v1.1 MD16G1118600.v1.1
prunus_persica Prupe.1G226500_v2.0.a1
pyrus_communis pycom13g10320 pycom16g10160
rosa_chinensis RchiOBHm_Chr4g0430371
rosa_laevigata RLG00000006981
rosa_multiflora Rmu_ssc0000082.1_g000001
rosa_roxburghii Rroxscaffold_5G00372170
rosa_rugosa Rorug04G0242700
rosa_samantha Rh4AG299100 Rh4BG305700 Rh4CG321600 Rh4DG303000
rosa_wichuraiana Rw4G025960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 507
AatII GACGTC 1 cut(s) 74
Acc16I TGCGCA 1 cut(s) 503
Acc36I ACCTGC 1 cut(s) 507
AccB1I GGYRCC 1 cut(s) 492
AccB7I CCANNNNNTGG 1 cut(s) 265
AccI GTMKAC 1 cut(s) 1518
AciI CCGC 3 cut(s) 848, 915, 1232
AclI AACGTT 1 cut(s) 731
AclWI GGATC 1 cut(s) 1420
AcoI YGGCCR 1 cut(s) 573
AcsI RAATTY 1 cut(s) 196
AcuI CTGAAG 1 cut(s) 462
AcvI CACGTG 2 cut(s) 1111, 1129
AcyI GRCGYC 2 cut(s) 71, 493
AfaI GTAC 3 cut(s) 67, 77, 758
AfiI CCNNNNNNNGG 4 cut(s) 219, 245, 265, 1231
AflIII ACRYGT 1 cut(s) 1108
AgsI TTSAA 2 cut(s) 42, 1495
AhlI ACTAGT 1 cut(s) 689
AjnI CCWGG 2 cut(s) 157, 1432
AleI CACNNNNGTG 1 cut(s) 1109
AluBI AGCT 8 cut(s) 230, 339, 437, 515, 944, 1271, 1399, 1454
AluI AGCT 8 cut(s) 230, 339, 437, 515, 944, 1271, 1399, 1454
Alw26I GTCTC 2 cut(s) 139, 1128
AlwI GGATC 1 cut(s) 1420
AoxI GGCC 7 cut(s) 236, 547, 573, 1204, 1221, 1299, 1346
ApaI GGGCCC 2 cut(s) 1208, 1225
ApeKI GCWGC 2 cut(s) 366, 512
ApoI RAATTY 1 cut(s) 196
Asp700I GAANNNNTTC 1 cut(s) 20
AspA2I CCTAGG 1 cut(s) 394
AspLEI GCGC 2 cut(s) 495, 504
AspS9I GGNCC 9 cut(s) 224, 1204, 1205, 1221, 1222, 1234, 1299, 1330, 1390
AsuC2I CCSGG 2 cut(s) 221, 1203
AsuHPI GGTGA 4 cut(s) 522, 601, 727, 868
AsuNHI GCTAGC 2 cut(s) 28, 940
AvaII GGWCC 4 cut(s) 224, 1234, 1330, 1390
AvrII CCTAGG 1 cut(s) 394
BaeGI GKGCMC 2 cut(s) 1208, 1225
BanI GGYRCC 1 cut(s) 492
BanII GRGCYC 3 cut(s) 1208, 1225, 1388
BauI CACGAG 1 cut(s) 351
BbrPI CACGTG 2 cut(s) 1111, 1129
BbvCI CCTCAGC 1 cut(s) 852
BbvI GCAGC 2 cut(s) 378, 524
BccI CCATC 7 cut(s) 267, 378, 1051, 1279, 1324, 1328, 1330
BceAI ACGGC 1 cut(s) 1557
BciT130I CCWGG 2 cut(s) 159, 1434
BcnI CCSGG 2 cut(s) 221, 1203
BcoDI GTCTC 2 cut(s) 139, 1128
BcuI ACTAGT 1 cut(s) 689
BfmI CTRYAG 1 cut(s) 1515
BfoI RGCGCY 1 cut(s) 496
BfuAI ACCTGC 1 cut(s) 507
BisI GCNGC 4 cut(s) 367, 513, 849, 916
BlnI CCTAGG 1 cut(s) 394
BlsI GCNGC 4 cut(s) 368, 514, 850, 917
Bme1390I CCNGG 4 cut(s) 159, 221, 1203, 1434
Bme18I GGWCC 4 cut(s) 224, 1234, 1330, 1390
BmgT120I GGNCC 9 cut(s) 224, 1204, 1205, 1221, 1222, 1234, 1299, 1330, 1390
BmiI GGNNCC 7 cut(s) 211, 225, 494, 1206, 1223, 1332, 1512
BmrFI CCNGG 4 cut(s) 159, 221, 1203, 1434
BmtI GCTAGC 2 cut(s) 32, 944
BplI GAGNNNNNCTC 2 cut(s) 1528, 1560
BpmI CTGGAG 2 cut(s) 180, 1058
Bpu10I CCTNAGC 2 cut(s) 340, 852
BpuEI CTTGAG 3 cut(s) 296, 820, 1379
BpuMI CCSGG 2 cut(s) 221, 1203
BsaAI YACGTR 2 cut(s) 1111, 1129
BsaHI GRCGYC 2 cut(s) 71, 493
BsaJI CCNNGG 4 cut(s) 157, 220, 394, 1432
BsaXI ACNNNNNCTCC 2 cut(s) 1358, 1388
Bsc4I CCNNNNNNNGG 4 cut(s) 219, 245, 265, 1231
Bse3DI GCAATG 2 cut(s) 1208, 1594
BseBI CCWGG 2 cut(s) 159, 1434
BseDI CCNNGG 4 cut(s) 157, 220, 394, 1432
BseGI GGATG 6 cut(s) 370, 607, 1062, 1074, 1316, 1375
BseLI CCNNNNNNNGG 4 cut(s) 219, 245, 265, 1231
BseMI GCAATG 2 cut(s) 1208, 1594
BseMII CTCAG 3 cut(s) 843, 943, 1341
BseRI GAGGAG 2 cut(s) 98, 1379
BseSI GKGCMC 2 cut(s) 1208, 1225
BseXI GCAGC 2 cut(s) 378, 524
BseYI CCCAGC 2 cut(s) 230, 1267
Bsh1285I CGRYCG 1 cut(s) 418
BshFI GGCC 7 cut(s) 238, 549, 575, 1206, 1223, 1301, 1348
BshNI GGYRCC 1 cut(s) 492
BsiEI CGRYCG 1 cut(s) 418
BsiSI CCGG 3 cut(s) 220, 950, 1202
BslFI GGGAC 4 cut(s) 140, 237, 1027, 1565
BslI CCNNNNNNNGG 4 cut(s) 219, 245, 265, 1231
BsmAI GTCTC 2 cut(s) 139, 1128
BsmFI GGGAC 4 cut(s) 140, 237, 1027, 1565
BsmI GAATGC 2 cut(s) 332, 1197
BsnI GGCC 7 cut(s) 238, 549, 575, 1206, 1223, 1301, 1348
Bsp120I GGGCCC 2 cut(s) 1204, 1221
Bsp1286I GDGCHC 3 cut(s) 1208, 1225, 1388
Bsp143I GATC 2 cut(s) 423, 1412
BspACI CCGC 3 cut(s) 848, 915, 1232
BspANI GGCC 7 cut(s) 238, 549, 575, 1206, 1223, 1301, 1348
BspCNI CTCAG 3 cut(s) 844, 942, 1342
BspLI GGNNCC 7 cut(s) 211, 225, 494, 1206, 1223, 1332, 1512
BspMI ACCTGC 1 cut(s) 507
BspOI GCTAGC 2 cut(s) 32, 944
BspPI GGATC 1 cut(s) 1420
BspT107I GGYRCC 1 cut(s) 492
BsrDI GCAATG 2 cut(s) 1208, 1594
BssECI CCNNGG 4 cut(s) 157, 220, 394, 1432
BssMI GATC 2 cut(s) 423, 1412
BssNI GRCGYC 2 cut(s) 71, 493
BssSI CACGAG 1 cut(s) 351
BssT1I CCWWGG 1 cut(s) 394
Bst2BI CACGAG 1 cut(s) 351
Bst2UI CCWGG 2 cut(s) 159, 1434
Bst4CI ACNGT 8 cut(s) 125, 185, 209, 419, 559, 982, 1024, 1459
Bst6I CTCTTC 3 cut(s) 26, 107, 821
BstACI GRCGYC 2 cut(s) 71, 493
BstBAI YACGTR 2 cut(s) 1111, 1129
BstC8I GCNNGC 6 cut(s) 30, 459, 942, 1273, 1401, 1473
BstDEI CTNAG 6 cut(s) 46, 340, 438, 852, 929, 1350
BstEII GGTNACC 1 cut(s) 1500
BstENI CCTNNNNNAGG 1 cut(s) 243
BstF5I GGATG 6 cut(s) 370, 607, 1062, 1074, 1316, 1375
BstH2I RGCGCY 1 cut(s) 496
BstHHI GCGC 2 cut(s) 495, 504
BstKTI GATC 2 cut(s) 426, 1415
BstMAI GTCTC 2 cut(s) 139, 1128
BstMBI GATC 2 cut(s) 423, 1412
BstMCI CGRYCG 1 cut(s) 418
BstMWI GCNNNNNNNGC 7 cut(s) 499, 501, 941, 946, 1229, 1468, 1477
BstNI CCWGG 2 cut(s) 159, 1434
BstNSI RCATGY 1 cut(s) 1572
BstPI GGTNACC 1 cut(s) 1500
BstSCI CCNGG 4 cut(s) 157, 219, 1201, 1432
BstSFI CTRYAG 1 cut(s) 1515
BstSLI GKGCMC 2 cut(s) 1208, 1225
BstV1I GCAGC 2 cut(s) 378, 524
BstX2I RGATCY 1 cut(s) 1412
BstXI CCANNNNNNTGG 2 cut(s) 234, 1323
BstYI RGATCY 1 cut(s) 1412
BsuRI GGCC 7 cut(s) 238, 549, 575, 1206, 1223, 1301, 1348
BtgZI GCGATG 1 cut(s) 1298
BtsCI GGATG 6 cut(s) 370, 607, 1062, 1074, 1316, 1375
BtsI GCAGTG 2 cut(s) 378, 925
BtsIMutI CAGTG 3 cut(s) 378, 925, 937
BveI ACCTGC 1 cut(s) 507
Cac8I GCNNGC 6 cut(s) 30, 459, 942, 1273, 1401, 1473
CfoI GCGC 2 cut(s) 495, 504
Cfr13I GGNCC 9 cut(s) 224, 1204, 1205, 1221, 1222, 1234, 1299, 1330, 1390
Csp6I GTAC 3 cut(s) 66, 76, 757
CviAII CATG 7 cut(s) 171, 177, 328, 1218, 1238, 1247, 1569
CviQI GTAC 3 cut(s) 66, 76, 757
DdeI CTNAG 6 cut(s) 46, 340, 438, 852, 929, 1350
DinI GGCGCC 1 cut(s) 494
DpnI GATC 2 cut(s) 425, 1414
DpnII GATC 2 cut(s) 423, 1412
EaeI YGGCCR 1 cut(s) 573
Eam1104I CTCTTC 3 cut(s) 26, 107, 821
EarI CTCTTC 3 cut(s) 26, 107, 821
Eco130I CCWWGG 1 cut(s) 394
Eco147I AGGCCT 2 cut(s) 549, 1348
Eco24I GRGCYC 3 cut(s) 1208, 1225, 1388
Eco47I GGWCC 4 cut(s) 224, 1234, 1330, 1390
Eco57I CTGAAG 1 cut(s) 462
Eco72I CACGTG 2 cut(s) 1111, 1129
Eco91I GGTNACC 1 cut(s) 1500
EcoNI CCTNNNNNAGG 1 cut(s) 243
EcoO109I RGGNCCY 1 cut(s) 1330
EcoO65I GGTNACC 1 cut(s) 1500
EcoRII CCWGG 2 cut(s) 157, 1432
EcoT14I CCWWGG 1 cut(s) 394
EcoT22I ATGCAT 1 cut(s) 1594
EcoT38I GRGCYC 3 cut(s) 1208, 1225, 1388
EgeI GGCGCC 1 cut(s) 494
EheI GGCGCC 1 cut(s) 494
ErhI CCWWGG 1 cut(s) 394
FaeI CATG 7 cut(s) 174, 180, 331, 1221, 1241, 1250, 1572
FaqI GGGAC 4 cut(s) 140, 237, 1027, 1565
FatI CATG 7 cut(s) 170, 176, 327, 1217, 1237, 1246, 1568
FauNDI CATATG 2 cut(s) 264, 522
FblI GTMKAC 1 cut(s) 1518
Fnu4HI GCNGC 4 cut(s) 367, 513, 849, 916
FokI GGATG 6 cut(s) 357, 614, 1061, 1069, 1303, 1382
FriOI GRGCYC 3 cut(s) 1208, 1225, 1388
Fsp4HI GCNGC 4 cut(s) 367, 513, 849, 916
FspI TGCGCA 1 cut(s) 503
GlaI GCGC 2 cut(s) 494, 503
GluI GCNGC 4 cut(s) 367, 513, 849, 916
GsaI CCCAGC 2 cut(s) 234, 1271
GsuI CTGGAG 2 cut(s) 180, 1058
HaeII RGCGCY 1 cut(s) 496
HaeIII GGCC 7 cut(s) 238, 549, 575, 1206, 1223, 1301, 1348
HapII CCGG 3 cut(s) 220, 950, 1202
HhaI GCGC 2 cut(s) 495, 504
Hin1I GRCGYC 2 cut(s) 71, 493
Hin1II CATG 7 cut(s) 174, 180, 331, 1221, 1241, 1250, 1572
Hin6I GCGC 2 cut(s) 493, 502
HinP1I GCGC 2 cut(s) 493, 502
HinfI GANTC 4 cut(s) 249, 540, 971, 1136
HpaII CCGG 3 cut(s) 220, 950, 1202
HphI GGTGA 4 cut(s) 522, 601, 727, 868
Hpy166II GTNNAC 2 cut(s) 1252, 1519
Hpy188I TCNGA 9 cut(s) 415, 423, 545, 976, 1141, 1190, 1390, 1422, 1528
Hpy188III TCNNGA 6 cut(s) 374, 480, 673, 1037, 1324, 1547
Hpy8I GTNNAC 2 cut(s) 1252, 1519
Hpy99I CGWCG 3 cut(s) 73, 76, 1510
HpyAV CCTTC 5 cut(s) 486, 604, 703, 1154, 1321
HpyCH4III ACNGT 8 cut(s) 125, 185, 209, 419, 559, 982, 1024, 1459
HpyCH4IV ACGT 5 cut(s) 71, 485, 731, 1110, 1128
HpyCH4V TGCA 7 cut(s) 170, 646, 1028, 1195, 1462, 1486, 1592
HpyF10VI GCNNNNNNNGC 7 cut(s) 499, 501, 941, 946, 1229, 1468, 1477
HpyF3I CTNAG 6 cut(s) 46, 340, 438, 852, 929, 1350
HpySE526I ACGT 5 cut(s) 71, 485, 731, 1110, 1128
Hsp92I GRCGYC 2 cut(s) 71, 493
Hsp92II CATG 7 cut(s) 174, 180, 331, 1221, 1241, 1250, 1572
HspAI GCGC 2 cut(s) 493, 502
KasI GGCGCC 1 cut(s) 492
Kzo9I GATC 2 cut(s) 423, 1412
LmnI GCTCC 2 cut(s) 478, 1510
Lsp1109I GCAGC 2 cut(s) 378, 524
MaeII ACGT 5 cut(s) 71, 485, 731, 1110, 1128
MaeIII GTNAC 6 cut(s) 179, 589, 715, 836, 920, 1500
MalI GATC 2 cut(s) 425, 1414
MboI GATC 2 cut(s) 423, 1412
MboII GAAGA 7 cut(s) 13, 94, 109, 838, 965, 968, 1567
MflI RGATCY 1 cut(s) 1412
MhlI GDGCHC 3 cut(s) 1208, 1225, 1388
MluCI AATT 6 cut(s) 196, 594, 778, 842, 876, 1490
Mly113I GGCGCC 1 cut(s) 493
MlyI GAGTC 1 cut(s) 1130
MmeI TCCRAC 3 cut(s) 438, 1164, 1400
Mph1103I ATGCAT 1 cut(s) 1594
MroXI GAANNNNTTC 1 cut(s) 20
MseI TTAA 5 cut(s) 632, 734, 747, 777, 1376
MslI CAYNNNNRTG 3 cut(s) 175, 1109, 1567
MspA1I CMGCKG 3 cut(s) 230, 515, 1271
MspI CCGG 3 cut(s) 220, 950, 1202
MspR9I CCNGG 4 cut(s) 159, 221, 1203, 1434
Mva1269I GAATGC 2 cut(s) 332, 1197
MvaI CCWGG 2 cut(s) 159, 1434
MwoI GCNNNNNNNGC 7 cut(s) 499, 501, 941, 946, 1229, 1468, 1477
NarI GGCGCC 1 cut(s) 493
NciI CCSGG 2 cut(s) 221, 1203
NdeI CATATG 2 cut(s) 264, 522
NdeII GATC 2 cut(s) 423, 1412
NheI GCTAGC 2 cut(s) 28, 940
NlaIII CATG 7 cut(s) 174, 180, 331, 1221, 1241, 1250, 1572
NlaIV GGNNCC 7 cut(s) 211, 225, 494, 1206, 1223, 1332, 1512
NmuCI GTSAC 4 cut(s) 589, 715, 836, 920
NsbI TGCGCA 1 cut(s) 503
NsiI ATGCAT 1 cut(s) 1594
NspI RCATGY 1 cut(s) 1572
OliI CACNNNNGTG 1 cut(s) 1109
PaqCI CACCTGC 1 cut(s) 507
PceI AGGCCT 2 cut(s) 549, 1348
PctI GAATGC 2 cut(s) 332, 1197
PdmI GAANNNNTTC 1 cut(s) 20
PfeI GAWTC 3 cut(s) 249, 540, 971
PflFI GACNNNGTC 1 cut(s) 1256
PflMI CCANNNNNTGG 1 cut(s) 265
PkrI GCNGC 4 cut(s) 368, 514, 850, 917
PleI GAGTC 1 cut(s) 1130
PluTI GGCGCC 1 cut(s) 496
PmaCI CACGTG 2 cut(s) 1111, 1129
PmlI CACGTG 2 cut(s) 1111, 1129
PpsI GAGTC 1 cut(s) 1130
Ppu21I YACGTR 2 cut(s) 1111, 1129
PpuMI RGGWCCY 1 cut(s) 1330
Psp1406I AACGTT 1 cut(s) 731
Psp5II RGGWCCY 1 cut(s) 1330
Psp6I CCWGG 2 cut(s) 157, 1432
PspCI CACGTG 2 cut(s) 1111, 1129
PspEI GGTNACC 1 cut(s) 1500
PspFI CCCAGC 2 cut(s) 230, 1267
PspGI CCWGG 2 cut(s) 157, 1432
PspN4I GGNNCC 7 cut(s) 211, 225, 494, 1206, 1223, 1332, 1512
PspOMI GGGCCC 2 cut(s) 1204, 1221
PspPI GGNCC 9 cut(s) 224, 1204, 1205, 1221, 1222, 1234, 1299, 1330, 1390
PspPPI RGGWCCY 1 cut(s) 1330
PsuI RGATCY 1 cut(s) 1412
PsyI GACNNNGTC 1 cut(s) 1256
PvuII CAGCTG 3 cut(s) 230, 515, 1271
RsaI GTAC 3 cut(s) 67, 77, 758
RsaNI GTAC 3 cut(s) 66, 76, 757
RseI CAYNNNNRTG 3 cut(s) 175, 1109, 1567
SaqAI TTAA 5 cut(s) 632, 734, 747, 777, 1376
SatI GCNGC 4 cut(s) 367, 513, 849, 916
Sau3AI GATC 2 cut(s) 423, 1412
Sau96I GGNCC 9 cut(s) 224, 1204, 1205, 1221, 1222, 1234, 1299, 1330, 1390
SchI GAGTC 1 cut(s) 1130
ScrFI CCNGG 4 cut(s) 159, 221, 1203, 1434
SduI GDGCHC 3 cut(s) 1208, 1225, 1388
SfcI CTRYAG 1 cut(s) 1515
SfoI GGCGCC 1 cut(s) 494
SinI GGWCC 4 cut(s) 224, 1234, 1330, 1390
SmiMI CAYNNNNRTG 3 cut(s) 175, 1109, 1567
SmlI CTYRAG 3 cut(s) 311, 799, 1394
SmoI CTYRAG 3 cut(s) 311, 799, 1394
SpeI ACTAGT 1 cut(s) 689
Sse9I AATT 6 cut(s) 196, 594, 778, 842, 876, 1490
SseBI AGGCCT 2 cut(s) 549, 1348
SsiI CCGC 3 cut(s) 848, 915, 1232
SspDI GGCGCC 1 cut(s) 492
SspI AATATT 1 cut(s) 642
StuI AGGCCT 2 cut(s) 549, 1348
StyD4I CCNGG 4 cut(s) 157, 219, 1201, 1432
StyI CCWWGG 1 cut(s) 394
TaaI ACNGT 8 cut(s) 125, 185, 209, 419, 559, 982, 1024, 1459
TaiI ACGT 5 cut(s) 74, 488, 734, 1113, 1131
TaqI TCGA 3 cut(s) 1009, 1362, 1548
TasI AATT 6 cut(s) 196, 594, 778, 842, 876, 1490
TauI GCSGC 2 cut(s) 851, 918
TfiI GAWTC 3 cut(s) 249, 540, 971
Tru1I TTAA 5 cut(s) 632, 734, 747, 777, 1376
Tru9I TTAA 5 cut(s) 632, 734, 747, 777, 1376
TscAI CASTG 3 cut(s) 385, 925, 937
TseFI GTSAC 4 cut(s) 589, 715, 836, 920
TseI GCWGC 2 cut(s) 366, 512
Tsp45I GTSAC 4 cut(s) 589, 715, 836, 920
TspDTI ATGAA 5 cut(s) 29, 594, 623, 1348, 1568
TspGWI ACGGA 1 cut(s) 1523
TspRI CASTG 3 cut(s) 385, 925, 937
Tth111I GACNNNGTC 1 cut(s) 1256
Van91I CCANNNNNTGG 1 cut(s) 265
VpaK11BI GGWCC 4 cut(s) 224, 1234, 1330, 1390
XagI CCTNNNNNAGG 1 cut(s) 243
XapI RAATTY 1 cut(s) 196
XceI RCATGY 1 cut(s) 1572
XcmI CCANNNNNNNNNTGG 2 cut(s) 680, 1215
XmaJI CCTAGG 1 cut(s) 394
XmiI GTMKAC 1 cut(s) 1518
XmnI GAANNNNTTC 1 cut(s) 20
ZraI GACGTC 1 cut(s) 72
Zsp2I ATGCAT 1 cut(s) 1594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.