Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g23820 |
| malus_domestica | MD13G1118500.v1.1 MD16G1118600.v1.1 |
| prunus_persica | Prupe.1G226500_v2.0.a1 |
| pyrus_communis | pycom13g10320 pycom16g10160 |
| rosa_chinensis | RchiOBHm_Chr4g0430371 |
| rosa_laevigata | RLG00000006981 |
| rosa_multiflora | Rmu_ssc0000082.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00372170 |
| rosa_rugosa | Rorug04G0242700 |
| rosa_samantha | Rh4AG299100 Rh4BG305700 Rh4CG321600 Rh4DG303000 |
| rosa_wichuraiana | Rw4G025960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 424 |
| AatII | GACGTC | 1 cut(s) | 123 |
| Acc16I | TGCGCA | 1 cut(s) | 420 |
| Acc36I | ACCTGC | 2 cut(s) | 424, 1038 |
| AccB1I | GGYRCC | 1 cut(s) | 409 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 272 |
| AccII | CGCG | 1 cut(s) | 1109 |
| AciI | CCGC | 3 cut(s) | 725, 792, 1109 |
| AclWI | GGATC | 1 cut(s) | 1275 |
| AcsI | RAATTY | 1 cut(s) | 35 |
| AcuI | CTGAAG | 1 cut(s) | 379 |
| AcvI | CACGTG | 3 cut(s) | 988, 1006, 1126 |
| AcyI | GRCGYC | 2 cut(s) | 120, 410 |
| AfaI | GTAC | 2 cut(s) | 126, 635 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 12, 252, 272, 1108 |
| AflIII | ACRYGT | 3 cut(s) | 985, 1170, 1248 |
| AgeI | ACCGGT | 1 cut(s) | 382 |
| AgsI | TTSAA | 7 cut(s) | 54, 91, 170, 511, 626, 917, 1414 |
| AjiI | CACGTC | 1 cut(s) | 1249 |
| AjnI | CCWGG | 1 cut(s) | 187 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 518, 550 |
| AleI | CACNNNNGTG | 1 cut(s) | 986 |
| AluBI | AGCT | 8 cut(s) | 114, 237, 346, 432, 821, 1148, 1331, 1417 |
| AluI | AGCT | 8 cut(s) | 114, 237, 346, 432, 821, 1148, 1331, 1417 |
| Alw21I | GWGCWC | 1 cut(s) | 1341 |
| Alw26I | GTCTC | 2 cut(s) | 1005, 1109 |
| Alw44I | GTGCAC | 1 cut(s) | 1337 |
| AlwI | GGATC | 1 cut(s) | 1275 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1391 |
| Ama87I | CYCGRG | 1 cut(s) | 1309 |
| AoxI | GGCC | 8 cut(s) | 191, 243, 464, 1081, 1098, 1176, 1223, 1294 |
| ApaI | GGGCCC | 2 cut(s) | 1085, 1102 |
| ApaLI | GTGCAC | 1 cut(s) | 1337 |
| ApeKI | GCWGC | 1 cut(s) | 429 |
| ApoI | RAATTY | 1 cut(s) | 35 |
| AsiGI | ACCGGT | 1 cut(s) | 382 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 69 |
| AspLEI | GCGC | 2 cut(s) | 412, 421 |
| AsuC2I | CCSGG | 4 cut(s) | 208, 1080, 1310, 1311 |
| AsuHPI | GGTGA | 3 cut(s) | 137, 439, 745 |
| AsuNHI | GCTAGC | 2 cut(s) | 77, 817 |
| AvaI | CYCGRG | 1 cut(s) | 1309 |
| AvaII | GGWCC | 3 cut(s) | 231, 1111, 1207 |
| AxyI | CCTNAGG | 1 cut(s) | 477 |
| BaeGI | GKGCMC | 3 cut(s) | 1085, 1102, 1341 |
| BanI | GGYRCC | 1 cut(s) | 409 |
| BanII | GRGCYC | 3 cut(s) | 1085, 1102, 1265 |
| BbrPI | CACGTG | 3 cut(s) | 988, 1006, 1126 |
| Bbv12I | GWGCWC | 1 cut(s) | 1341 |
| BbvCI | CCTCAGC | 1 cut(s) | 729 |
| BbvI | GCAGC | 1 cut(s) | 441 |
| BccI | CCATC | 6 cut(s) | 274, 295, 1156, 1201, 1205, 1368 |
| BceAI | ACGGC | 1 cut(s) | 1018 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 341, 369, 375, 403 |
| BciT130I | CCWGG | 1 cut(s) | 189 |
| BcnI | CCSGG | 4 cut(s) | 208, 1080, 1310, 1311 |
| BcoDI | GTCTC | 2 cut(s) | 1005, 1109 |
| BfaI | CTAG | 6 cut(s) | 12, 78, 468, 620, 818, 1353 |
| BfmI | CTRYAG | 1 cut(s) | 1332 |
| BfoI | RGCGCY | 1 cut(s) | 413 |
| BfuAI | ACCTGC | 2 cut(s) | 424, 1038 |
| BisI | GCNGC | 3 cut(s) | 430, 726, 793 |
| BlsI | GCNGC | 3 cut(s) | 431, 727, 794 |
| Bme1390I | CCNGG | 5 cut(s) | 189, 208, 1080, 1310, 1311 |
| Bme18I | GGWCC | 3 cut(s) | 231, 1111, 1207 |
| BmeT110I | CYCGRG | 1 cut(s) | 1309 |
| BmgBI | CACGTC | 1 cut(s) | 1249 |
| BmiI | GGNNCC | 5 cut(s) | 258, 411, 1083, 1100, 1209 |
| BmrFI | CCNGG | 5 cut(s) | 189, 208, 1080, 1310, 1311 |
| BmtI | GCTAGC | 2 cut(s) | 81, 821 |
| BpmI | CTGGAG | 1 cut(s) | 284 |
| Bpu10I | CCTNAGC | 2 cut(s) | 347, 729 |
| BpuEI | CTTGAG | 2 cut(s) | 303, 697 |
| BpuMI | CCSGG | 4 cut(s) | 208, 1080, 1310, 1311 |
| BsaAI | YACGTR | 3 cut(s) | 988, 1006, 1126 |
| BsaHI | GRCGYC | 2 cut(s) | 120, 410 |
| BsaJI | CCNNGG | 5 cut(s) | 187, 188, 359, 450, 1309 |
| BsaWI | WCCGGW | 1 cut(s) | 382 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1235, 1265 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 12, 252, 272, 1108 |
| Bse118I | RCCGGY | 2 cut(s) | 382, 1381 |
| Bse1I | ACTGG | 3 cut(s) | 29, 201, 301 |
| Bse21I | CCTNAGG | 1 cut(s) | 477 |
| Bse3DI | GCAATG | 1 cut(s) | 1085 |
| BseBI | CCWGG | 1 cut(s) | 189 |
| BseDI | CCNNGG | 5 cut(s) | 187, 188, 359, 450, 1309 |
| BseGI | GGATG | 4 cut(s) | 312, 951, 1140, 1193 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 12, 252, 272, 1108 |
| BseMI | GCAATG | 1 cut(s) | 1085 |
| BseMII | CTCAG | 3 cut(s) | 720, 820, 1285 |
| BseNI | ACTGG | 3 cut(s) | 29, 201, 301 |
| BseRI | GAGGAG | 3 cut(s) | 147, 467, 1256 |
| BseSI | GKGCMC | 3 cut(s) | 1085, 1102, 1341 |
| BseXI | GCAGC | 1 cut(s) | 441 |
| BseYI | CCCAGC | 2 cut(s) | 237, 1144 |
| Bsh1236I | CGCG | 1 cut(s) | 1109 |
| Bsh1285I | CGRYCG | 1 cut(s) | 383 |
| BshFI | GGCC | 8 cut(s) | 193, 245, 466, 1083, 1100, 1178, 1225, 1296 |
| BshNI | GGYRCC | 1 cut(s) | 409 |
| BshTI | ACCGGT | 1 cut(s) | 382 |
| BsiEI | CGRYCG | 1 cut(s) | 383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1341 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1309 |
| BsiSI | CCGG | 7 cut(s) | 208, 383, 827, 1079, 1297, 1310, 1382 |
| BslFI | GGGAC | 1 cut(s) | 904 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 12, 252, 272, 1108 |
| BsmAI | GTCTC | 2 cut(s) | 1005, 1109 |
| BsmBI | CGTCTC | 1 cut(s) | 1109 |
| BsmFI | GGGAC | 1 cut(s) | 904 |
| BsmI | GAATGC | 2 cut(s) | 339, 1074 |
| BsnI | GGCC | 8 cut(s) | 193, 245, 466, 1083, 1100, 1178, 1225, 1296 |
| BsoBI | CYCGRG | 1 cut(s) | 1309 |
| Bsp120I | GGGCCC | 2 cut(s) | 1081, 1098 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1085, 1102, 1265, 1341 |
| Bsp143I | GATC | 1 cut(s) | 1267 |
| BspACI | CCGC | 3 cut(s) | 725, 792, 1109 |
| BspANI | GGCC | 8 cut(s) | 193, 245, 466, 1083, 1100, 1178, 1225, 1296 |
| BspCNI | CTCAG | 3 cut(s) | 721, 819, 1284 |
| BspFNI | CGCG | 1 cut(s) | 1109 |
| BspLI | GGNNCC | 5 cut(s) | 258, 411, 1083, 1100, 1209 |
| BspMI | ACCTGC | 2 cut(s) | 424, 1038 |
| BspOI | GCTAGC | 2 cut(s) | 81, 821 |
| BspPI | GGATC | 1 cut(s) | 1275 |
| BspT107I | GGYRCC | 1 cut(s) | 409 |
| BsrDI | GCAATG | 1 cut(s) | 1085 |
| BsrFI | RCCGGY | 2 cut(s) | 382, 1381 |
| BsrI | ACTGG | 3 cut(s) | 29, 201, 301 |
| BssAI | RCCGGY | 2 cut(s) | 382, 1381 |
| BssECI | CCNNGG | 5 cut(s) | 187, 188, 359, 450, 1309 |
| BssMI | GATC | 1 cut(s) | 1267 |
| BssNI | GRCGYC | 2 cut(s) | 120, 410 |
| Bst2UI | CCWGG | 1 cut(s) | 189 |
| Bst4CI | ACNGT | 3 cut(s) | 859, 901, 1336 |
| Bst6I | CTCTTC | 3 cut(s) | 75, 156, 698 |
| BstACI | GRCGYC | 2 cut(s) | 120, 410 |
| BstBAI | YACGTR | 3 cut(s) | 988, 1006, 1126 |
| BstC8I | GCNNGC | 6 cut(s) | 79, 221, 819, 1150, 1278, 1350 |
| BstDEI | CTNAG | 6 cut(s) | 347, 477, 729, 806, 842, 1271 |
| BstEII | GGTNACC | 1 cut(s) | 1377 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 250 |
| BstF5I | GGATG | 4 cut(s) | 312, 951, 1140, 1193 |
| BstFNI | CGCG | 1 cut(s) | 1109 |
| BstH2I | RGCGCY | 1 cut(s) | 413 |
| BstHHI | GCGC | 2 cut(s) | 412, 421 |
| BstKTI | GATC | 1 cut(s) | 1270 |
| BstMAI | GTCTC | 2 cut(s) | 1005, 1109 |
| BstMBI | GATC | 1 cut(s) | 1267 |
| BstMCI | CGRYCG | 1 cut(s) | 383 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 220, 416, 418, 616, 818, 823, 1106, 1345 |
| BstNI | CCWGG | 1 cut(s) | 189 |
| BstNSI | RCATGY | 3 cut(s) | 223, 1174, 1449 |
| BstPI | GGTNACC | 1 cut(s) | 1377 |
| BstSCI | CCNGG | 5 cut(s) | 187, 206, 1078, 1308, 1309 |
| BstSFI | CTRYAG | 1 cut(s) | 1332 |
| BstSLI | GKGCMC | 3 cut(s) | 1085, 1102, 1341 |
| BstUI | CGCG | 1 cut(s) | 1109 |
| BstV1I | GCAGC | 1 cut(s) | 441 |
| BstX2I | RGATCY | 1 cut(s) | 1267 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 241, 335, 1200 |
| BstYI | RGATCY | 1 cut(s) | 1267 |
| Bsu36I | CCTNAGG | 1 cut(s) | 477 |
| BsuRI | GGCC | 8 cut(s) | 193, 245, 466, 1083, 1100, 1178, 1225, 1296 |
| BtgZI | GCGATG | 1 cut(s) | 1175 |
| BtrI | CACGTC | 1 cut(s) | 1249 |
| BtsCI | GGATG | 4 cut(s) | 312, 951, 1140, 1193 |
| BtsI | GCAGTG | 2 cut(s) | 802, 1471 |
| BtsIMutI | CAGTG | 5 cut(s) | 194, 802, 814, 1341, 1471 |
| BveI | ACCTGC | 2 cut(s) | 424, 1038 |
| Cac8I | GCNNGC | 6 cut(s) | 79, 221, 819, 1150, 1278, 1350 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1391 |
| CfoI | GCGC | 2 cut(s) | 412, 421 |
| Cfr10I | RCCGGY | 2 cut(s) | 382, 1381 |
| Cfr9I | CCCGGG | 1 cut(s) | 1309 |
| Csp6I | GTAC | 2 cut(s) | 125, 634 |
| CspAI | ACCGGT | 1 cut(s) | 382 |
| CviAII | CATG | 7 cut(s) | 74, 220, 335, 1095, 1115, 1171, 1446 |
| CviQI | GTAC | 2 cut(s) | 125, 634 |
| DdeI | CTNAG | 6 cut(s) | 347, 477, 729, 806, 842, 1271 |
| DinI | GGCGCC | 1 cut(s) | 411 |
| DpnI | GATC | 1 cut(s) | 1269 |
| DpnII | GATC | 1 cut(s) | 1267 |
| Eam1104I | CTCTTC | 3 cut(s) | 75, 156, 698 |
| EarI | CTCTTC | 3 cut(s) | 75, 156, 698 |
| Eco147I | AGGCCT | 2 cut(s) | 466, 1225 |
| Eco24I | GRGCYC | 3 cut(s) | 1085, 1102, 1265 |
| Eco47I | GGWCC | 3 cut(s) | 231, 1111, 1207 |
| Eco57I | CTGAAG | 1 cut(s) | 379 |
| Eco72I | CACGTG | 3 cut(s) | 988, 1006, 1126 |
| Eco81I | CCTNAGG | 1 cut(s) | 477 |
| Eco88I | CYCGRG | 1 cut(s) | 1309 |
| Eco91I | GGTNACC | 1 cut(s) | 1377 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 250 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1207 |
| EcoO65I | GGTNACC | 1 cut(s) | 1377 |
| EcoRI | GAATTC | 1 cut(s) | 35 |
| EcoRII | CCWGG | 1 cut(s) | 187 |
| EcoT38I | GRGCYC | 3 cut(s) | 1085, 1102, 1265 |
| EgeI | GGCGCC | 1 cut(s) | 411 |
| EheI | GGCGCC | 1 cut(s) | 411 |
| Esp3I | CGTCTC | 1 cut(s) | 1109 |
| FaeI | CATG | 7 cut(s) | 77, 223, 338, 1098, 1118, 1174, 1449 |
| FaqI | GGGAC | 1 cut(s) | 904 |
| FatI | CATG | 7 cut(s) | 73, 219, 334, 1094, 1114, 1170, 1445 |
| FauNDI | CATATG | 1 cut(s) | 439 |
| Fnu4HI | GCNGC | 3 cut(s) | 430, 726, 793 |
| FokI | GGATG | 4 cut(s) | 299, 938, 1127, 1180 |
| FriOI | GRGCYC | 3 cut(s) | 1085, 1102, 1265 |
| Fsp4HI | GCNGC | 3 cut(s) | 430, 726, 793 |
| FspBI | CTAG | 6 cut(s) | 12, 78, 468, 620, 818, 1353 |
| FspI | TGCGCA | 1 cut(s) | 420 |
| GlaI | GCGC | 2 cut(s) | 411, 420 |
| GluI | GCNGC | 3 cut(s) | 430, 726, 793 |
| GsaI | CCCAGC | 2 cut(s) | 241, 1148 |
| GsuI | CTGGAG | 1 cut(s) | 284 |
| HaeII | RGCGCY | 1 cut(s) | 413 |
| HaeIII | GGCC | 8 cut(s) | 193, 245, 466, 1083, 1100, 1178, 1225, 1296 |
| HapII | CCGG | 7 cut(s) | 208, 383, 827, 1079, 1297, 1310, 1382 |
| HhaI | GCGC | 2 cut(s) | 412, 421 |
| Hin1I | GRCGYC | 2 cut(s) | 120, 410 |
| Hin1II | CATG | 7 cut(s) | 77, 223, 338, 1098, 1118, 1174, 1449 |
| Hin6I | GCGC | 2 cut(s) | 410, 419 |
| HinP1I | GCGC | 2 cut(s) | 410, 419 |
| HincII | GTYRAC | 2 cut(s) | 1168, 1396 |
| HindII | GTYRAC | 2 cut(s) | 1168, 1396 |
| HinfI | GANTC | 3 cut(s) | 457, 848, 1013 |
| HpaII | CCGG | 7 cut(s) | 208, 383, 827, 1079, 1297, 1310, 1382 |
| HphI | GGTGA | 3 cut(s) | 137, 439, 745 |
| Hpy166II | GTNNAC | 5 cut(s) | 1123, 1129, 1168, 1339, 1396 |
| Hpy188III | TCNNGA | 6 cut(s) | 397, 550, 626, 914, 1201, 1424 |
| Hpy8I | GTNNAC | 5 cut(s) | 1123, 1129, 1168, 1339, 1396 |
| Hpy99I | CGWCG | 2 cut(s) | 122, 125 |
| HpyAV | CCTTC | 7 cut(s) | 234, 403, 481, 520, 580, 1031, 1198 |
| HpyCH4III | ACNGT | 3 cut(s) | 859, 901, 1336 |
| HpyCH4IV | ACGT | 6 cut(s) | 120, 987, 1005, 1125, 1248, 1452 |
| HpyCH4V | TGCA | 9 cut(s) | 219, 437, 523, 905, 1072, 1280, 1339, 1363, 1469 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 220, 416, 418, 616, 818, 823, 1106, 1345 |
| HpyF3I | CTNAG | 6 cut(s) | 347, 477, 729, 806, 842, 1271 |
| HpySE526I | ACGT | 6 cut(s) | 120, 987, 1005, 1125, 1248, 1452 |
| Hsp92I | GRCGYC | 2 cut(s) | 120, 410 |
| Hsp92II | CATG | 7 cut(s) | 77, 223, 338, 1098, 1118, 1174, 1449 |
| HspAI | GCGC | 2 cut(s) | 410, 419 |
| KasI | GGCGCC | 1 cut(s) | 409 |
| Kzo9I | GATC | 1 cut(s) | 1267 |
| LmnI | GCTCC | 2 cut(s) | 111, 395 |
| Lsp1109I | GCAGC | 1 cut(s) | 441 |
| MaeI | CTAG | 6 cut(s) | 12, 78, 468, 620, 818, 1353 |
| MaeII | ACGT | 6 cut(s) | 120, 987, 1005, 1125, 1248, 1452 |
| MaeIII | GTNAC | 3 cut(s) | 713, 797, 1377 |
| MalI | GATC | 1 cut(s) | 1269 |
| MboI | GATC | 1 cut(s) | 1267 |
| MboII | GAAGA | 6 cut(s) | 62, 143, 158, 715, 842, 845 |
| MflI | RGATCY | 1 cut(s) | 1267 |
| MhlI | GDGCHC | 4 cut(s) | 1085, 1102, 1265, 1341 |
| MluCI | AATT | 6 cut(s) | 35, 568, 655, 719, 753, 1367 |
| Mly113I | GGCGCC | 1 cut(s) | 410 |
| MlyI | GAGTC | 1 cut(s) | 1007 |
| MmeI | TCCRAC | 2 cut(s) | 403, 1041 |
| MroXI | GAANNNNTTC | 1 cut(s) | 69 |
| MseI | TTAA | 2 cut(s) | 47, 654 |
| MslI | CAYNNNNRTG | 2 cut(s) | 986, 1444 |
| MspA1I | CMGCKG | 3 cut(s) | 237, 432, 1148 |
| MspI | CCGG | 7 cut(s) | 208, 383, 827, 1079, 1297, 1310, 1382 |
| MspR9I | CCNGG | 5 cut(s) | 189, 208, 1080, 1310, 1311 |
| Mva1269I | GAATGC | 2 cut(s) | 339, 1074 |
| MvaI | CCWGG | 1 cut(s) | 189 |
| MvnI | CGCG | 1 cut(s) | 1109 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 220, 416, 418, 616, 818, 823, 1106, 1345 |
| NarI | GGCGCC | 1 cut(s) | 410 |
| NciI | CCSGG | 4 cut(s) | 208, 1080, 1310, 1311 |
| NdeI | CATATG | 1 cut(s) | 439 |
| NdeII | GATC | 1 cut(s) | 1267 |
| NheI | GCTAGC | 2 cut(s) | 77, 817 |
| NlaIII | CATG | 7 cut(s) | 77, 223, 338, 1098, 1118, 1174, 1449 |
| NlaIV | GGNNCC | 5 cut(s) | 258, 411, 1083, 1100, 1209 |
| NmuCI | GTSAC | 2 cut(s) | 713, 797 |
| NsbI | TGCGCA | 1 cut(s) | 420 |
| NspI | RCATGY | 3 cut(s) | 223, 1174, 1449 |
| OliI | CACNNNNGTG | 1 cut(s) | 986 |
| PaeI | GCATGC | 1 cut(s) | 223 |
| PaqCI | CACCTGC | 1 cut(s) | 424 |
| PasI | CCCWGGG | 1 cut(s) | 188 |
| PceI | AGGCCT | 2 cut(s) | 466, 1225 |
| PciI | ACATGT | 1 cut(s) | 1170 |
| PctI | GAATGC | 2 cut(s) | 339, 1074 |
| PdmI | GAANNNNTTC | 1 cut(s) | 69 |
| PfeI | GAWTC | 2 cut(s) | 457, 848 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 272 |
| PfoI | TCCNGGA | 1 cut(s) | 206 |
| PinAI | ACCGGT | 1 cut(s) | 382 |
| PkrI | GCNGC | 3 cut(s) | 431, 727, 794 |
| PleI | GAGTC | 1 cut(s) | 1007 |
| PluTI | GGCGCC | 1 cut(s) | 413 |
| PmaCI | CACGTG | 3 cut(s) | 988, 1006, 1126 |
| PmlI | CACGTG | 3 cut(s) | 988, 1006, 1126 |
| PpsI | GAGTC | 1 cut(s) | 1007 |
| Ppu21I | YACGTR | 3 cut(s) | 988, 1006, 1126 |
| PpuMI | RGGWCCY | 1 cut(s) | 1207 |
| PscI | ACATGT | 1 cut(s) | 1170 |
| Psp5II | RGGWCCY | 1 cut(s) | 1207 |
| Psp6I | CCWGG | 1 cut(s) | 187 |
| PspCI | CACGTG | 3 cut(s) | 988, 1006, 1126 |
| PspEI | GGTNACC | 1 cut(s) | 1377 |
| PspFI | CCCAGC | 2 cut(s) | 237, 1144 |
| PspGI | CCWGG | 1 cut(s) | 187 |
| PspN4I | GGNNCC | 5 cut(s) | 258, 411, 1083, 1100, 1209 |
| PspOMI | GGGCCC | 2 cut(s) | 1081, 1098 |
| PspPPI | RGGWCCY | 1 cut(s) | 1207 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1391 |
| PsuI | RGATCY | 1 cut(s) | 1267 |
| PvuII | CAGCTG | 3 cut(s) | 237, 432, 1148 |
| RsaI | GTAC | 2 cut(s) | 126, 635 |
| RsaNI | GTAC | 2 cut(s) | 125, 634 |
| RseI | CAYNNNNRTG | 2 cut(s) | 986, 1444 |
| SaqAI | TTAA | 2 cut(s) | 47, 654 |
| SatI | GCNGC | 3 cut(s) | 430, 726, 793 |
| Sau3AI | GATC | 1 cut(s) | 1267 |
| SchI | GAGTC | 1 cut(s) | 1007 |
| ScrFI | CCNGG | 5 cut(s) | 189, 208, 1080, 1310, 1311 |
| SduI | GDGCHC | 4 cut(s) | 1085, 1102, 1265, 1341 |
| SfcI | CTRYAG | 1 cut(s) | 1332 |
| SfoI | GGCGCC | 1 cut(s) | 411 |
| SinI | GGWCC | 3 cut(s) | 231, 1111, 1207 |
| SmaI | CCCGGG | 1 cut(s) | 1311 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 986, 1444 |
| SmlI | CTYRAG | 2 cut(s) | 318, 676 |
| SmoI | CTYRAG | 2 cut(s) | 318, 676 |
| SphI | GCATGC | 1 cut(s) | 223 |
| Sse9I | AATT | 6 cut(s) | 35, 568, 655, 719, 753, 1367 |
| SseBI | AGGCCT | 2 cut(s) | 466, 1225 |
| SsiI | CCGC | 3 cut(s) | 725, 792, 1109 |
| SspDI | GGCGCC | 1 cut(s) | 409 |
| SspI | AATATT | 1 cut(s) | 519 |
| SspMI | CTAG | 6 cut(s) | 12, 78, 468, 620, 818, 1353 |
| StuI | AGGCCT | 2 cut(s) | 466, 1225 |
| StyD4I | CCNGG | 5 cut(s) | 187, 206, 1078, 1308, 1309 |
| TaaI | ACNGT | 3 cut(s) | 859, 901, 1336 |
| TaiI | ACGT | 6 cut(s) | 123, 990, 1008, 1128, 1251, 1455 |
| TaqI | TCGA | 3 cut(s) | 227, 604, 1425 |
| TasI | AATT | 6 cut(s) | 35, 568, 655, 719, 753, 1367 |
| TauI | GCSGC | 2 cut(s) | 728, 795 |
| TfiI | GAWTC | 2 cut(s) | 457, 848 |
| Tru1I | TTAA | 2 cut(s) | 47, 654 |
| Tru9I | TTAA | 2 cut(s) | 47, 654 |
| TscAI | CASTG | 5 cut(s) | 201, 802, 814, 1341, 1471 |
| TseFI | GTSAC | 2 cut(s) | 713, 797 |
| TseI | GCWGC | 1 cut(s) | 429 |
| Tsp45I | GTSAC | 2 cut(s) | 713, 797 |
| TspDTI | ATGAA | 5 cut(s) | 62, 78, 500, 1129, 1445 |
| TspMI | CCCGGG | 1 cut(s) | 1309 |
| TspRI | CASTG | 5 cut(s) | 201, 802, 814, 1341, 1471 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 272 |
| VneI | GTGCAC | 1 cut(s) | 1337 |
| VpaK11BI | GGWCC | 3 cut(s) | 231, 1111, 1207 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 250 |
| XapI | RAATTY | 1 cut(s) | 35 |
| XceI | RCATGY | 3 cut(s) | 223, 1174, 1449 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 557, 1092 |
| XmaI | CCCGGG | 1 cut(s) | 1309 |
| XmnI | GAANNNNTTC | 1 cut(s) | 69 |
| XspI | CTAG | 6 cut(s) | 12, 78, 468, 620, 818, 1353 |
| ZraI | GACGTC | 1 cut(s) | 121 |