Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0016521

Physical Location & Seq

Genomic Coordinates Forward (+)

9464093 .. 9468438

Gene Structure 4346 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1129600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGAGGCTTCGTTGCATTTCCGCGGGGTTAGAATCCCCTGCTACTCGCGAACTCCGAGACTCATGCACTTGTCCCAGGTCTCCTCCGCGTTGTCGCCGTCGCGATCACTCTACGCGGCGGTGGAAAATGCATGCAGAAGGAGTAGGCTGAGAGCTAAGAGCGAGAAGAGAAGAATCGAAGCTGTGCTTGGAGAAGAAGAGGAGGAAGAGAATGCGACAGAGAGCCGTGGGTCCGATGCGGTGCCGTTTACGTGCGTGATGAAGTTCGGGGGATCGTCGCTGGCGTCGGCGGAGAGGGTGAGAGAGATTGCTCAGCTCGTTGTCAGCTTTCCCGATGAAAAGCCTATCATCGTGCTCTCTGCCATGGGGAAGACCACTAATAACCTCTTACTTGCTGGGGAGAAGGCCGTTAGCTGCGGGGTTTCGAATGCGTCCGAAATCAAAGAATTGAGCTTTGTAAAACAACTCCATCTCAGGACTGTCCATGAACTTGGAATCGATGCCTCCGTTATTTCGGTAGTCTTGGAAGAACTAGAGCAACTGCTGAAGGGAATAGCTATGATGAAAGAGTTGACTCTCCGAACAAGAGACTATCTAGTTTCATTTGGAGAGTGCATGTCTACAAGAATCTTTGCAGCTTATCTAAATAGCATTGGTGTTAAGGCGCGCCAATATGATGCATTTGACATTGGTTTCATAACAACAGATGACTTCACCAATGCTGACATCTTAGAGGCAACTTACCCATCTGTCGCTAAGCGTTTATATGACGATTGGATAAGTGATCCTGCAATTCCTGTTGTTACTGGCTTTCTCGGAAAGGGCTGGAAAACTTGTGCAGTCACTACCCTGGGCAGGGGTGGTAGTGATTTGACAGCCACAACAATAGGCAAAGCCCTAGGCCTGCGAGAAGTTCAGGTGTGGAAGGATGTTGATGGTGTTTTGACCTGCGATCCTAGTATATGTCCTGTTGCAGAACCTGTTCCTTTTTTGACTTTCGATGAGGCAGCTGAGCTTGCATATTTTGGTGCTCAGGTTCTACATCCTCAATCCATGAGACCAGCTAGAGATGGTGAAATACCTGTTAGGGTCAAGAACTCCTATAATCCCAAAGCTCCTGGTACCCTCATCACTAAAACAAGAGATATGAGCAAGGCTGTTCTAACTAGCATAGTTCTGAAGCAAAATGTCACCCTGTTGGATATTGTCAGTACACGCATGCTTGGGCAAGTTGGTTTCCTTGCAAAGGTGTTCTCAACCTTCGAAGATTTGGGCATATCTGTGGATGTTGTTGCAACAAGTGAAGTTAGTTTATCTTTGACATTGGATCCATCAAAATTTTGGAGTAGGGAACTAATTCAGCAGGAACTTGACCACATGGAAGAAGAACTCGAAAAAATTGCATTCGTGAATCTTCTGCAGCACAGATCAATCATCTCGCTCATAGGGAATGTTCAGTATTCTTCACTGATACTAGAAAAGGCATTCCATGTTCTTCGAACCAACCAAGTCAATGTTCAAATGATCTCGCAAGGGGCATCCAAGGTAAACATCTCATTGATAGTAAATGATAGTGAGGCTGAAAAATGCGTCAAGGCCCTTCACCATGCCTTTTTTGAGAGCGGCGACCTGTCTGAGCTAGTACCAGAATTTGGATTTGGAAATGGGTCGGCCTCGCTATTACCAGTAGAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004072 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016774 GO:0019202 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01210 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01210 map01230

Pfam Domains

Protein Families

AA_kinase

Protein Analysis

566

Amino Acids

61.95

Weight (kDa)

5.5

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	84 - 366	6.9e-47	Amino acid kinase family
ACT_9	PF22468	402 - 444	6.1e-06	ACT domain
ACT_9	PF22468	479 - 538	2.7e-15	ACT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016521)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13280
fragaria_vesca	FvH4_4g22800
malus_domestica	MD16G1129600.v1.1
prunus_persica	Prupe.1G216900_v2.0.a1
pyrus_communis	pycom16g10980
rosa_chinensis	RchiOBHm_Chr4g0429031
rosa_laevigata	RLG00000007102
rosa_multiflora	Rmu_sc0008629.1_g000018
rosa_roxburghii	Rroxscaffold_5G00370680
rosa_rugosa	Rorug04G0232200
rosa_samantha	Rh4AG288200 Rh4BG294400 Rh4DG291300
rosa_wichuraiana	Rw4G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	956
Acc65I	GGTACC	1 cut(s)	1121
AccB1I	GGYRCC	2 cut(s)	241, 1121
AccB7I	CCANNNNNTGG	1 cut(s)	1652
AccBSI	CCGCTC	1 cut(s)	1623
AccI	GTMKAC	1 cut(s)	620
AccII	CGCG	6 cut(s)	24, 49, 89, 103, 116, 667
AciI	CCGC	9 cut(s)	22, 24, 87, 116, 119, 239, 290, 417, 1623
AclWI	GGATC	5 cut(s)	280, 779, 947, 1322, 1335
AcsI	RAATTY	2 cut(s)	1337, 1649
AcuI	CTGAAG	2 cut(s)	566, 1199
AcyI	GRCGYC	1 cut(s)	284
AfaI	GTAC	3 cut(s)	1123, 1213, 1644
AfiI	CCNNNNNNNGG	4 cut(s)	855, 856, 1246, 1652
AgsI	TTSAA	1 cut(s)	1520
AjnI	CCWGG	3 cut(s)	75, 849, 1117
AjuI	GAANNNNNNNTTGG	6 cut(s)	171, 203, 1500, 1532, 1641, 1673
Alw21I	GWGCWC	2 cut(s)	357, 1033
Alw26I	GTCTC	4 cut(s)	52, 85, 582, 1051
AlwI	GGATC	5 cut(s)	280, 779, 947, 1322, 1335
AlwNI	CAGNNNCTG	1 cut(s)	980
AoxI	GGCC	4 cut(s)	405, 901, 1596, 1671
ApeKI	GCWGC	4 cut(s)	414, 635, 1007, 1420
ApoI	RAATTY	2 cut(s)	1337, 1649
AscI	GGCGCGCC	1 cut(s)	665
Asp700I	GAANNNNTTC	2 cut(s)	981, 1356
Asp718I	GGTACC	1 cut(s)	1121
AspA2I	CCTAGG	1 cut(s)	898
AspLEI	GCGC	2 cut(s)	667, 669
AspS9I	GGNCC	2 cut(s)	231, 1597
AsuHPI	GGTGA	5 cut(s)	310, 706, 1085, 1183, 1595
AsuII	TTCGAA	3 cut(s)	425, 1263, 1498
AvaII	GGWCC	1 cut(s)	231
AvrII	CCTAGG	1 cut(s)	898
BamHI	GGATCC	1 cut(s)	1327
BanI	GGYRCC	2 cut(s)	241, 1121
BbsI	GAAGAC	1 cut(s)	377
Bbv12I	GWGCWC	2 cut(s)	357, 1033
BbvI	GCAGC	4 cut(s)	401, 647, 1019, 1432
BccI	CCATC	5 cut(s)	477, 754, 929, 1064, 1339
BceAI	ACGGC	4 cut(s)	82, 210, 229, 392
BcgI	CGANNNNNNTGC	4 cut(s)	46, 80, 1382, 1416
BciT130I	CCWGG	3 cut(s)	77, 851, 1119
BcoDI	GTCTC	4 cut(s)	52, 85, 582, 1051
BfaI	CTAG	8 cut(s)	533, 596, 899, 957, 1065, 1167, 1475, 1640
BfmI	CTRYAG	1 cut(s)	1418
BfuAI	ACCTGC	1 cut(s)	956
BisI	GCNGC	6 cut(s)	117, 415, 636, 1008, 1421, 1624
BlnI	CCTAGG	1 cut(s)	898
BlpI	GCTNAGC	3 cut(s)	312, 756, 1011
BlsI	GCNGC	6 cut(s)	118, 416, 637, 1009, 1422, 1625
Bme1390I	CCNGG	3 cut(s)	77, 851, 1119
Bme18I	GGWCC	1 cut(s)	231
BmgT120I	GGNCC	2 cut(s)	231, 1597
BmiI	GGNNCC	4 cut(s)	232, 243, 1123, 1329
BmrFI	CCNGG	3 cut(s)	77, 851, 1119
BmsI	GCATC	4 cut(s)	226, 490, 667, 1547
BpiI	GAAGAC	1 cut(s)	377
Bpu10I	CCTNAGC	1 cut(s)	1032
Bpu1102I	GCTNAGC	3 cut(s)	312, 756, 1011
Bpu14I	TTCGAA	3 cut(s)	425, 1263, 1498
Bsa29I	ATCGAT	1 cut(s)	498
BsaAI	YACGTR	1 cut(s)	252
BsaHI	GRCGYC	1 cut(s)	284
BsaI	GGTCTC	2 cut(s)	85, 1051
BsaJI	CCNNGG	8 cut(s)	22, 75, 226, 363, 849, 850, 898, 1542
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bsc4I	CCNNNNNNNGG	4 cut(s)	855, 856, 1246, 1652
Bse1I	ACTGG	2 cut(s)	811, 1685
BseBI	CCWGG	3 cut(s)	77, 851, 1119
BseCI	ATCGAT	1 cut(s)	498
BseDI	CCNNGG	8 cut(s)	22, 75, 226, 363, 849, 850, 898, 1542
BseGI	GGATG	4 cut(s)	934, 1042, 1291, 1538
BseLI	CCNNNNNNNGG	4 cut(s)	855, 856, 1246, 1652
BseMII	CTCAG	6 cut(s)	140, 326, 487, 1002, 1046, 1626
BseNI	ACTGG	2 cut(s)	811, 1685
BsePI	GCGCGC	1 cut(s)	665
BseRI	GAGGAG	2 cut(s)	73, 215
BseXI	GCAGC	4 cut(s)	401, 647, 1019, 1432
BseYI	CCCAGC	1 cut(s)	395
BsgI	GTGCAG	1 cut(s)	858
Bsh1236I	CGCG	6 cut(s)	24, 49, 89, 103, 116, 667
BshFI	GGCC	4 cut(s)	407, 903, 1598, 1673
BshNI	GGYRCC	2 cut(s)	241, 1121
BshVI	ATCGAT	1 cut(s)	498
BsiHKAI	GWGCWC	2 cut(s)	357, 1033
BslFI	GGGAC	1 cut(s)	58
BslI	CCNNNNNNNGG	4 cut(s)	855, 856, 1246, 1652
BsmAI	GTCTC	4 cut(s)	52, 85, 582, 1051
BsmFI	GGGAC	1 cut(s)	58
BsmI	GAATGC	4 cut(s)	217, 433, 1403, 1484
BsnI	GGCC	4 cut(s)	407, 903, 1598, 1673
Bso31I	GGTCTC	2 cut(s)	85, 1051
Bsp119I	TTCGAA	3 cut(s)	425, 1263, 1498
Bsp1286I	GDGCHC	2 cut(s)	357, 1033
Bsp143I	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
Bsp1720I	GCTNAGC	3 cut(s)	312, 756, 1011
Bsp19I	CCATGG	1 cut(s)	363
Bsp68I	TCGCGA	2 cut(s)	49, 103
BspACI	CCGC	9 cut(s)	22, 24, 87, 116, 119, 239, 290, 417, 1623
BspANI	GGCC	4 cut(s)	407, 903, 1598, 1673
BspCNI	CTCAG	6 cut(s)	141, 325, 486, 1003, 1045, 1627
BspDI	ATCGAT	1 cut(s)	498
BspFNI	CGCG	6 cut(s)	24, 49, 89, 103, 116, 667
BspLI	GGNNCC	4 cut(s)	232, 243, 1123, 1329
BspMAI	CTGCAG	1 cut(s)	1422
BspMI	ACCTGC	1 cut(s)	956
BspPI	GGATC	5 cut(s)	280, 779, 947, 1322, 1335
BspT104I	TTCGAA	3 cut(s)	425, 1263, 1498
BspT107I	GGYRCC	2 cut(s)	241, 1121
BspTNI	GGTCTC	2 cut(s)	85, 1051
BsrBI	CCGCTC	1 cut(s)	1623
BsrI	ACTGG	2 cut(s)	811, 1685
BssECI	CCNNGG	8 cut(s)	22, 75, 226, 363, 849, 850, 898, 1542
BssHII	GCGCGC	1 cut(s)	665
BssMI	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
BssNI	GRCGYC	1 cut(s)	284
BssT1I	CCWWGG	3 cut(s)	363, 898, 1542
Bst2UI	CCWGG	3 cut(s)	77, 851, 1119
Bst4CI	ACNGT	1 cut(s)	481
Bst6I	CTCTTC	3 cut(s)	161, 192, 201
BstACI	GRCGYC	1 cut(s)	284
BstBAI	YACGTR	1 cut(s)	252
BstBI	TTCGAA	3 cut(s)	425, 1263, 1498
BstC8I	GCNNGC	6 cut(s)	133, 282, 667, 905, 1017, 1220
BstDEI	CTNAG	9 cut(s)	149, 156, 312, 473, 730, 756, 1011, 1032, 1635
BstDSI	CCRYGG	3 cut(s)	22, 226, 363
BstENI	CCTNNNNNAGG	1 cut(s)	1244
BstF5I	GGATG	4 cut(s)	934, 1042, 1291, 1538
BstFNI	CGCG	6 cut(s)	24, 49, 89, 103, 116, 667
BstHHI	GCGC	2 cut(s)	667, 669
BstKTI	GATC	7 cut(s)	107, 275, 787, 955, 1330, 1430, 1527
BstMAI	GTCTC	4 cut(s)	52, 85, 582, 1051
BstMBI	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
BstMWI	GCNNNNNNNGC	1 cut(s)	1016
BstNI	CCWGG	3 cut(s)	77, 851, 1119
BstNSI	RCATGY	3 cut(s)	135, 619, 1222
BstSCI	CCNGG	3 cut(s)	75, 849, 1117
BstSFI	CTRYAG	1 cut(s)	1418
BstUI	CGCG	6 cut(s)	24, 49, 89, 103, 116, 667
BstV1I	GCAGC	4 cut(s)	401, 647, 1019, 1432
BstV2I	GAAGAC	1 cut(s)	377
BstX2I	RGATCY	1 cut(s)	1327
BstXI	CCANNNNNNTGG	1 cut(s)	491
BstYI	RGATCY	1 cut(s)	1327
Bsu15I	ATCGAT	1 cut(s)	498
BsuRI	GGCC	4 cut(s)	407, 903, 1598, 1673
BsuTUI	ATCGAT	1 cut(s)	498
BtgI	CCRYGG	3 cut(s)	22, 226, 363
BtsCI	GGATG	4 cut(s)	934, 1042, 1291, 1538
BtsIMutI	CAGTG	1 cut(s)	1466
BtuMI	TCGCGA	2 cut(s)	49, 103
BveI	ACCTGC	1 cut(s)	956
Cac8I	GCNNGC	6 cut(s)	133, 282, 667, 905, 1017, 1220
CaiI	CAGNNNCTG	1 cut(s)	980
CfoI	GCGC	2 cut(s)	667, 669
Cfr13I	GGNCC	2 cut(s)	231, 1597
Cfr42I	CCGCGG	1 cut(s)	25
ClaI	ATCGAT	1 cut(s)	498
CseI	GACGC	3 cut(s)	273, 420, 1579
Csp6I	GTAC	3 cut(s)	1122, 1212, 1643
CviQI	GTAC	3 cut(s)	1122, 1212, 1643
DdeI	CTNAG	9 cut(s)	149, 156, 312, 473, 730, 756, 1011, 1032, 1635
DpnI	GATC	7 cut(s)	106, 274, 786, 954, 1329, 1429, 1526
DpnII	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
Eam1104I	CTCTTC	3 cut(s)	161, 192, 201
EarI	CTCTTC	3 cut(s)	161, 192, 201
EciI	GGCGGA	1 cut(s)	305
Eco130I	CCWWGG	3 cut(s)	363, 898, 1542
Eco147I	AGGCCT	1 cut(s)	903
Eco31I	GGTCTC	2 cut(s)	85, 1051
Eco47I	GGWCC	1 cut(s)	231
Eco57I	CTGAAG	2 cut(s)	566, 1199
EcoNI	CCTNNNNNAGG	1 cut(s)	1244
EcoO109I	RGGNCCY	1 cut(s)	1597
EcoRII	CCWGG	3 cut(s)	75, 849, 1117
EcoT14I	CCWWGG	3 cut(s)	363, 898, 1542
EcoT22I	ATGCAT	2 cut(s)	133, 682
ErhI	CCWWGG	3 cut(s)	363, 898, 1542
FalI	AAGNNNNNCTT	2 cut(s)	171, 203
FaqI	GGGAC	1 cut(s)	58
FauI	CCCGC	2 cut(s)	17, 410
FblI	GTMKAC	1 cut(s)	620
Fnu4HI	GCNGC	6 cut(s)	117, 415, 636, 1008, 1421, 1624
FokI	GGATG	4 cut(s)	941, 1029, 1298, 1525
Fsp4HI	GCNGC	6 cut(s)	117, 415, 636, 1008, 1421, 1624
FspBI	CTAG	8 cut(s)	533, 596, 899, 957, 1065, 1167, 1475, 1640
GlaI	GCGC	2 cut(s)	666, 668
GluI	GCNGC	6 cut(s)	117, 415, 636, 1008, 1421, 1624
GsaI	CCCAGC	1 cut(s)	399
HaeIII	GGCC	4 cut(s)	407, 903, 1598, 1673
HgaI	GACGC	3 cut(s)	273, 420, 1579
HhaI	GCGC	2 cut(s)	667, 669
Hin1I	GRCGYC	1 cut(s)	284
Hin6I	GCGC	2 cut(s)	665, 667
HinP1I	GCGC	2 cut(s)	665, 667
HincII	GTYRAC	1 cut(s)	573
HindII	GTYRAC	1 cut(s)	573
HinfI	GANTC	7 cut(s)	33, 60, 174, 495, 574, 627, 1411
HphI	GGTGA	5 cut(s)	310, 706, 1085, 1183, 1595
Hpy166II	GTNNAC	5 cut(s)	249, 573, 621, 1214, 1549
Hpy188I	TCNGA	7 cut(s)	57, 235, 436, 581, 818, 1179, 1636
Hpy188III	TCNNGA	6 cut(s)	48, 102, 332, 475, 1093, 1408
Hpy8I	GTNNAC	5 cut(s)	249, 573, 621, 1214, 1549
Hpy99I	CGWCG	3 cut(s)	103, 280, 289
HpyAV	CCTTC	6 cut(s)	132, 397, 541, 919, 1270, 1610
HpyCH4III	ACNGT	1 cut(s)	481
HpyCH4IV	ACGT	1 cut(s)	251
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1016
HpyF3I	CTNAG	9 cut(s)	149, 156, 312, 473, 730, 756, 1011, 1032, 1635
HpySE526I	ACGT	1 cut(s)	251
Hsp92I	GRCGYC	1 cut(s)	284
HspAI	GCGC	2 cut(s)	665, 667
KpnI	GGTACC	1 cut(s)	1125
KspI	CCGCGG	1 cut(s)	25
Kzo9I	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
LmnI	GCTCC	1 cut(s)	1120
Lsp1109I	GCAGC	4 cut(s)	401, 647, 1019, 1432
LweI	GCATC	4 cut(s)	226, 490, 667, 1547
MaeI	CTAG	8 cut(s)	533, 596, 899, 957, 1065, 1167, 1475, 1640
MaeII	ACGT	1 cut(s)	251
MaeIII	GTNAC	3 cut(s)	802, 841, 1189
MalI	GATC	7 cut(s)	106, 274, 786, 954, 1329, 1429, 1526
MbiI	CCGCTC	1 cut(s)	1623
MboI	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
MflI	RGATCY	1 cut(s)	1327
MhlI	GDGCHC	2 cut(s)	357, 1033
MluCI	AATT	6 cut(s)	446, 792, 1337, 1356, 1398, 1649
MlyI	GAGTC	2 cut(s)	54, 568
MmeI	TCCRAC	1 cut(s)	1179
Mph1103I	ATGCAT	2 cut(s)	133, 682
MroXI	GAANNNNTTC	2 cut(s)	981, 1356
MseI	TTAA	1 cut(s)	660
MslI	CAYNNNNRTG	1 cut(s)	1280
MspA1I	CMGCKG	2 cut(s)	24, 1010
MspR9I	CCNGG	3 cut(s)	77, 851, 1119
Mva1269I	GAATGC	4 cut(s)	217, 433, 1403, 1484
MvaI	CCWGG	3 cut(s)	77, 851, 1119
MvnI	CGCG	6 cut(s)	24, 49, 89, 103, 116, 667
MwoI	GCNNNNNNNGC	1 cut(s)	1016
NcoI	CCATGG	1 cut(s)	363
NdeII	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
NlaIV	GGNNCC	4 cut(s)	232, 243, 1123, 1329
NmuCI	GTSAC	2 cut(s)	841, 1189
NruI	TCGCGA	2 cut(s)	49, 103
NsiI	ATGCAT	2 cut(s)	133, 682
NspI	RCATGY	3 cut(s)	135, 619, 1222
NspV	TTCGAA	3 cut(s)	425, 1263, 1498
PaeI	GCATGC	2 cut(s)	135, 1222
PalAI	GGCGCGCC	1 cut(s)	665
PasI	CCCWGGG	1 cut(s)	850
PauI	GCGCGC	1 cut(s)	665
PceI	AGGCCT	1 cut(s)	903
PcsI	WCGNNNNNNNCGW	3 cut(s)	53, 281, 504
PctI	GAATGC	4 cut(s)	217, 433, 1403, 1484
PdmI	GAANNNNTTC	2 cut(s)	981, 1356
PfeI	GAWTC	5 cut(s)	33, 174, 495, 627, 1411
PflMI	CCANNNNNTGG	1 cut(s)	1652
PkrI	GCNGC	6 cut(s)	118, 416, 637, 1009, 1422, 1625
PleI	GAGTC	2 cut(s)	54, 568
PpsI	GAGTC	2 cut(s)	54, 568
Ppu21I	YACGTR	1 cut(s)	252
Psp6I	CCWGG	3 cut(s)	75, 849, 1117
PspFI	CCCAGC	1 cut(s)	395
PspGI	CCWGG	3 cut(s)	75, 849, 1117
PspN4I	GGNNCC	4 cut(s)	232, 243, 1123, 1329
PspPI	GGNCC	2 cut(s)	231, 1597
PstI	CTGCAG	1 cut(s)	1422
PstNI	CAGNNNCTG	1 cut(s)	980
PsuI	RGATCY	1 cut(s)	1327
PteI	GCGCGC	1 cut(s)	665
PvuII	CAGCTG	1 cut(s)	1010
RruI	TCGCGA	2 cut(s)	49, 103
RsaI	GTAC	3 cut(s)	1123, 1213, 1644
RsaNI	GTAC	3 cut(s)	1122, 1212, 1643
RseI	CAYNNNNRTG	1 cut(s)	1280
SacII	CCGCGG	1 cut(s)	25
SaqAI	TTAA	1 cut(s)	660
SatI	GCNGC	6 cut(s)	117, 415, 636, 1008, 1421, 1624
Sau3AI	GATC	7 cut(s)	104, 272, 784, 952, 1327, 1427, 1524
Sau96I	GGNCC	2 cut(s)	231, 1597
SchI	GAGTC	2 cut(s)	54, 568
ScrFI	CCNGG	3 cut(s)	77, 851, 1119
SduI	GDGCHC	2 cut(s)	357, 1033
SfaNI	GCATC	4 cut(s)	226, 490, 667, 1547
SfcI	CTRYAG	1 cut(s)	1418
Sfr303I	CCGCGG	1 cut(s)	25
SfuI	TTCGAA	3 cut(s)	425, 1263, 1498
SgrBI	CCGCGG	1 cut(s)	25
SgsI	GGCGCGCC	1 cut(s)	665
SinI	GGWCC	1 cut(s)	231
SmiMI	CAYNNNNRTG	1 cut(s)	1280
SphI	GCATGC	2 cut(s)	135, 1222
Sse9I	AATT	6 cut(s)	446, 792, 1337, 1356, 1398, 1649
SseBI	AGGCCT	1 cut(s)	903
SsiI	CCGC	9 cut(s)	22, 24, 87, 116, 119, 239, 290, 417, 1623
SspMI	CTAG	8 cut(s)	533, 596, 899, 957, 1065, 1167, 1475, 1640
StuI	AGGCCT	1 cut(s)	903
StyD4I	CCNGG	3 cut(s)	75, 849, 1117
StyI	CCWWGG	3 cut(s)	363, 898, 1542
TaaI	ACNGT	1 cut(s)	481
TaiI	ACGT	1 cut(s)	254
TaqI	TCGA	7 cut(s)	177, 425, 498, 999, 1263, 1392, 1498
TasI	AATT	6 cut(s)	446, 792, 1337, 1356, 1398, 1649
TatI	WGTACW	1 cut(s)	1211
TauI	GCSGC	2 cut(s)	119, 1626
TfiI	GAWTC	5 cut(s)	33, 174, 495, 627, 1411
Tru1I	TTAA	1 cut(s)	660
Tru9I	TTAA	1 cut(s)	660
TscAI	CASTG	1 cut(s)	1473
TseFI	GTSAC	2 cut(s)	841, 1189
TseI	GCWGC	4 cut(s)	414, 635, 1007, 1420
Tsp45I	GTSAC	2 cut(s)	841, 1189
TspDTI	ATGAA	6 cut(s)	275, 351, 501, 578, 591, 685
TspGWI	ACGGA	1 cut(s)	496
TspRI	CASTG	1 cut(s)	1473
Van91I	CCANNNNNTGG	1 cut(s)	1652
VpaK11BI	GGWCC	1 cut(s)	231
XagI	CCTNNNNNAGG	1 cut(s)	1244
XapI	RAATTY	2 cut(s)	1337, 1649
XceI	RCATGY	3 cut(s)	135, 619, 1222
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1338
XmaJI	CCTAGG	1 cut(s)	898
XmiI	GTMKAC	1 cut(s)	620
XmnI	GAANNNNTTC	2 cut(s)	981, 1356
XspI	CTAG	8 cut(s)	533, 596, 899, 957, 1065, 1167, 1475, 1640
Zsp2I	ATGCAT	2 cut(s)	133, 682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.