Rmu_sc0008629.1_g000018

Aspartokinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008629.1
Physical Location & Seq
Reverse (-)
75331 .. 77944
2614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008629.1_g000018.1.cds

Sequence Viewer

Length: 1401 bp
atgatggcttcactgcatttcggccgcgttagaattcggagctattctgcaactccaagactcgcacactcgccgcgcgtgcgatggctgtcctccgccgcggcctcgccgtcgcggtcgttgtatgcggcggtggagaatgcatgtaaaggcggaggcttgagagctgagagacggacgaagagaatcgaagctgtggttggggaagaagagagaggagatgaaacggcgtcgtttagttgcgtgatgaaattcggagggtcgtcggtggcgacggcggagaggataagagagattgctgagctggttgtgagttttccggaggagaagcctgtggttgtgctctctgcaatggggaagaccactaataacctcttacttgctggggagaaagctgtcagttgcggggtttcgaatgcttctgaaatcgaagaattgagctatgtaaaacaactgcatctccagactgttgatgaacttggagttgatccttctgttgtttcgggacacttgcaagaattggagcaacttctgaaggggatagcaatgatgaaagagttgactctgcgcacaagagactatctagtttcatttggagagtgcatgtccacacgaatcgttgcagcttatctgaataagattggtgttaaggcgcgccagtatgatgcatttgacattggtttcataacaacagatgacttcaccaatgctgaaattttggagggaacttacccatctgttgccaaaagattaaatgatgattggattagtgatcctgcgattcccattgttactggctttctcggaaaggcctcgaaatctcgtgctgttactaccctgggtaggggtggtagtgatttgacagccacaaccattggtaaagccctaggcttgcgagaagtccaggtgtggaaggatgttgatggtgttttgacctgcgatcctagtatatgttctaatgcacaacctgttccttatttgactttcgatgaggcggctgagcttgcatattttggtgctcaggttctacatccgcattctatgagaccagctagagatggcgatattcctgttagggtcaagaactcttataaccctaaagctcctggtacaatcatcactaaagcaagagatatgagcaaggctgttctaaccagcatagtcctgaagcaaaatatcaccctgttggatattgtcagcacacgcatgcttggtcaagttggtttccttgcaaaggtgttttcaacctttgaagatttgggcatatctgttgatgttgttgcaacaagtgaagttagtttatctttgacgttggatccatcaaaattctggagtagagaactaattcagcaggcaagctcagaaattatgttctttgtttatgagttcttgtttgcttaa

Protein Analysis

466

Amino Acids

50.75

Weight (kDa)

6.16

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016521)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13280
fragaria_vesca FvH4_4g22800
malus_domestica MD16G1129600.v1.1
prunus_persica Prupe.1G216900_v2.0.a1
pyrus_communis pycom16g10980
rosa_chinensis RchiOBHm_Chr4g0429031
rosa_laevigata RLG00000007102
rosa_multiflora Rmu_sc0008629.1_g000018
rosa_roxburghii Rroxscaffold_5G00370680
rosa_rugosa Rorug04G0232200
rosa_samantha Rh4AG288200 Rh4BG294400 Rh4DG291300
rosa_wichuraiana Rw4G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1092
Acc16I TGCGCA 1 cut(s) 569
Acc36I ACCTGC 1 cut(s) 944
AccII CGCG 6 cut(s) 27, 76, 78, 101, 115, 655
AccIII TCCGGA 1 cut(s) 319
AclWI GGATC 5 cut(s) 482, 767, 935, 1310, 1323
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 4 cut(s) 33, 251, 714, 1325
AcuI CTGAAG 2 cut(s) 554, 1187
AcyI GRCGYC 1 cut(s) 230
AfaI GTAC 1 cut(s) 1111
AfiI CCNNNNNNNGG 3 cut(s) 843, 844, 1234
AgsI TTSAA 2 cut(s) 1245, 1253
AjnI CCWGG 3 cut(s) 837, 903, 1105
AjuI GAANNNNNNNTTGG 2 cut(s) 183, 215
Alw21I GWGCWC 2 cut(s) 345, 1021
Alw26I GTCTC 3 cut(s) 166, 570, 1039
AlwI GGATC 5 cut(s) 482, 767, 935, 1310, 1323
Aor13HI TCCGGA 1 cut(s) 319
AoxI GGCC 3 cut(s) 22, 102, 810
ApeKI GCWGC 1 cut(s) 623
ApoI RAATTY 4 cut(s) 33, 251, 714, 1325
AscI GGCGCGCC 1 cut(s) 653
Asp700I GAANNNNTTC 1 cut(s) 1344
AspA2I CCTAGG 1 cut(s) 886
AspLEI GCGC 4 cut(s) 78, 570, 655, 657
AsuHPI GGTGA 2 cut(s) 694, 1171
AsuII TTCGAA 1 cut(s) 413
AvrII CCTAGG 1 cut(s) 886
BamHI GGATCC 1 cut(s) 1315
BauI CACGAG 1 cut(s) 822
BbsI GAAGAC 1 cut(s) 365
Bbv12I GWGCWC 2 cut(s) 345, 1021
BbvI GCAGC 1 cut(s) 635
BccI CCATC 5 cut(s) 78, 742, 917, 1052, 1327
BceAI ACGGC 3 cut(s) 94, 243, 291
BciT130I CCWGG 3 cut(s) 839, 905, 1107
BcoDI GTCTC 3 cut(s) 166, 570, 1039
BfaI CTAG 4 cut(s) 584, 887, 945, 1053
BfuAI ACCTGC 1 cut(s) 944
BisI GCNGC 7 cut(s) 25, 74, 99, 102, 129, 624, 996
BlnI CCTAGG 1 cut(s) 886
BlpI GCTNAGC 2 cut(s) 300, 999
BlsI GCNGC 7 cut(s) 26, 75, 100, 103, 130, 625, 997
Bme1390I CCNGG 3 cut(s) 839, 905, 1107
BmiI GGNNCC 1 cut(s) 1317
BmrFI CCNGG 3 cut(s) 839, 905, 1107
BmsI GCATC 2 cut(s) 466, 655
BpiI GAAGAC 1 cut(s) 365
BpmI CTGGAG 2 cut(s) 446, 1351
Bpu10I CCTNAGC 1 cut(s) 1020
Bpu1102I GCTNAGC 2 cut(s) 300, 999
Bpu14I TTCGAA 1 cut(s) 413
BpuEI CTTGAG 1 cut(s) 181
BsaHI GRCGYC 1 cut(s) 230
BsaI GGTCTC 1 cut(s) 1039
BsaJI CCNNGG 4 cut(s) 99, 837, 838, 886
BsaWI WCCGGW 1 cut(s) 319
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 3 cut(s) 843, 844, 1234
Bse1I ACTGG 2 cut(s) 658, 799
Bse3DI GCAATG 2 cut(s) 357, 552
BseAI TCCGGA 1 cut(s) 319
BseBI CCWGG 3 cut(s) 839, 905, 1107
BseDI CCNNGG 4 cut(s) 99, 837, 838, 886
BseGI GGATG 2 cut(s) 922, 1030
BseLI CCNNNNNNNGG 3 cut(s) 843, 844, 1234
BseMI GCAATG 2 cut(s) 357, 552
BseMII CTCAG 5 cut(s) 159, 291, 990, 1034, 1374
BseNI ACTGG 2 cut(s) 658, 799
BsePI GCGCGC 1 cut(s) 653
BseRI GAGGAG 2 cut(s) 231, 338
BseX3I CGGCCG 1 cut(s) 22
BseXI GCAGC 1 cut(s) 635
BseYI CCCAGC 1 cut(s) 383
Bsh1236I CGCG 6 cut(s) 27, 76, 78, 101, 115, 655
Bsh1285I CGRYCG 2 cut(s) 25, 119
BshFI GGCC 3 cut(s) 24, 104, 812
BsiEI CGRYCG 2 cut(s) 25, 119
BsiHKAI GWGCWC 2 cut(s) 345, 1021
BsiSI CCGG 1 cut(s) 320
BslFI GGGAC 1 cut(s) 519
BslI CCNNNNNNNGG 3 cut(s) 843, 844, 1234
BsmAI GTCTC 3 cut(s) 166, 570, 1039
BsmBI CGTCTC 1 cut(s) 166
BsmFI GGGAC 1 cut(s) 519
BsmI GAATGC 3 cut(s) 145, 421, 1036
BsnI GGCC 3 cut(s) 24, 104, 812
Bso31I GGTCTC 1 cut(s) 1039
Bsp119I TTCGAA 1 cut(s) 413
Bsp1286I GDGCHC 2 cut(s) 345, 1021
Bsp13I TCCGGA 1 cut(s) 319
Bsp143I GATC 4 cut(s) 487, 772, 940, 1315
Bsp1720I GCTNAGC 2 cut(s) 300, 999
BspANI GGCC 3 cut(s) 24, 104, 812
BspCNI CTCAG 5 cut(s) 160, 292, 991, 1033, 1373
BspEI TCCGGA 1 cut(s) 319
BspFNI CGCG 6 cut(s) 27, 76, 78, 101, 115, 655
BspLI GGNNCC 1 cut(s) 1317
BspMI ACCTGC 1 cut(s) 944
BspPI GGATC 5 cut(s) 482, 767, 935, 1310, 1323
BspT104I TTCGAA 1 cut(s) 413
BspTNI GGTCTC 1 cut(s) 1039
BsrDI GCAATG 2 cut(s) 357, 552
BsrI ACTGG 2 cut(s) 658, 799
BssECI CCNNGG 4 cut(s) 99, 837, 838, 886
BssHII GCGCGC 1 cut(s) 653
BssMI GATC 4 cut(s) 487, 772, 940, 1315
BssNI GRCGYC 1 cut(s) 230
BssSI CACGAG 1 cut(s) 822
BssT1I CCWWGG 1 cut(s) 886
Bst2BI CACGAG 1 cut(s) 822
Bst2UI CCWGG 3 cut(s) 839, 905, 1107
Bst4CI ACNGT 1 cut(s) 469
Bst6I CTCTTC 2 cut(s) 176, 204
BstACI GRCGYC 1 cut(s) 230
BstBI TTCGAA 1 cut(s) 413
BstC8I GCNNGC 7 cut(s) 80, 655, 893, 1005, 1208, 1353, 1357
BstDEI CTNAG 5 cut(s) 168, 300, 999, 1020, 1360
BstDSI CCRYGG 1 cut(s) 99
BstENI CCTNNNNNAGG 1 cut(s) 1232
BstF5I GGATG 2 cut(s) 922, 1030
BstFNI CGCG 6 cut(s) 27, 76, 78, 101, 115, 655
BstHHI GCGC 4 cut(s) 78, 570, 655, 657
BstKTI GATC 4 cut(s) 490, 775, 943, 1318
BstMAI GTCTC 3 cut(s) 166, 570, 1039
BstMBI GATC 4 cut(s) 487, 772, 940, 1315
BstMCI CGRYCG 2 cut(s) 25, 119
BstMWI GCNNNNNNNGC 2 cut(s) 79, 1004
BstNI CCWGG 3 cut(s) 839, 905, 1107
BstNSI RCATGY 3 cut(s) 147, 607, 1210
BstSCI CCNGG 3 cut(s) 837, 903, 1105
BstUI CGCG 6 cut(s) 27, 76, 78, 101, 115, 655
BstV1I GCAGC 1 cut(s) 635
BstV2I GAAGAC 1 cut(s) 365
BstX2I RGATCY 1 cut(s) 1315
BstYI RGATCY 1 cut(s) 1315
BstZI CGGCCG 1 cut(s) 22
BsuRI GGCC 3 cut(s) 24, 104, 812
BtgI CCRYGG 1 cut(s) 99
BtgZI GCGATG 1 cut(s) 97
BtsCI GGATG 2 cut(s) 922, 1030
BtsI GCAGTG 1 cut(s) 11
BtsIMutI CAGTG 1 cut(s) 11
BveI ACCTGC 1 cut(s) 944
Cac8I GCNNGC 7 cut(s) 80, 655, 893, 1005, 1208, 1353, 1357
CfoI GCGC 4 cut(s) 78, 570, 655, 657
Cfr42I CCGCGG 1 cut(s) 102
CseI GACGC 1 cut(s) 219
Csp6I GTAC 1 cut(s) 1110
CspCI CAANNNNNGTGG 2 cut(s) 856, 891
CviAII CATG 3 cut(s) 144, 604, 1207
CviQI GTAC 1 cut(s) 1110
DdeI CTNAG 5 cut(s) 168, 300, 999, 1020, 1360
DpnI GATC 4 cut(s) 489, 774, 942, 1317
DpnII GATC 4 cut(s) 487, 772, 940, 1315
EaeI YGGCCR 1 cut(s) 22
EagI CGGCCG 1 cut(s) 22
Eam1104I CTCTTC 2 cut(s) 176, 204
EarI CTCTTC 2 cut(s) 176, 204
EciI GGCGGA 3 cut(s) 85, 168, 293
EclXI CGGCCG 1 cut(s) 22
Eco130I CCWWGG 1 cut(s) 886
Eco147I AGGCCT 1 cut(s) 812
Eco31I GGTCTC 1 cut(s) 1039
Eco52I CGGCCG 1 cut(s) 22
Eco57I CTGAAG 2 cut(s) 554, 1187
EcoNI CCTNNNNNAGG 1 cut(s) 1232
EcoRI GAATTC 1 cut(s) 33
EcoRII CCWGG 3 cut(s) 837, 903, 1105
EcoT14I CCWWGG 1 cut(s) 886
EcoT22I ATGCAT 2 cut(s) 145, 670
ErhI CCWWGG 1 cut(s) 886
Esp3I CGTCTC 1 cut(s) 166
FaeI CATG 3 cut(s) 147, 607, 1210
FaqI GGGAC 1 cut(s) 519
FatI CATG 3 cut(s) 143, 603, 1206
FauI CCCGC 1 cut(s) 398
Fnu4HI GCNGC 7 cut(s) 25, 74, 99, 102, 129, 624, 996
FokI GGATG 2 cut(s) 929, 1017
Fsp4HI GCNGC 7 cut(s) 25, 74, 99, 102, 129, 624, 996
FspBI CTAG 4 cut(s) 584, 887, 945, 1053
FspI TGCGCA 1 cut(s) 569
GlaI GCGC 4 cut(s) 77, 569, 654, 656
GluI GCNGC 7 cut(s) 25, 74, 99, 102, 129, 624, 996
GsaI CCCAGC 1 cut(s) 387
GsuI CTGGAG 2 cut(s) 446, 1351
HaeIII GGCC 3 cut(s) 24, 104, 812
HapII CCGG 1 cut(s) 320
HgaI GACGC 1 cut(s) 219
HhaI GCGC 4 cut(s) 78, 570, 655, 657
Hin1I GRCGYC 1 cut(s) 230
Hin1II CATG 3 cut(s) 147, 607, 1210
Hin6I GCGC 4 cut(s) 76, 568, 653, 655
HinP1I GCGC 4 cut(s) 76, 568, 653, 655
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HinfI GANTC 5 cut(s) 60, 186, 562, 615, 781
HpaII CCGG 1 cut(s) 320
HphI GGTGA 2 cut(s) 694, 1171
Hpy166II GTNNAC 2 cut(s) 561, 609
Hpy188I TCNGA 7 cut(s) 39, 257, 424, 534, 633, 806, 1363
Hpy188III TCNNGA 6 cut(s) 320, 463, 504, 1081, 1165, 1330
Hpy8I GTNNAC 2 cut(s) 561, 609
Hpy99I CGWCG 4 cut(s) 115, 235, 268, 277
HpyAV CCTTC 3 cut(s) 501, 529, 907
HpyCH4III ACNGT 1 cut(s) 469
HpyCH4IV ACGT 1 cut(s) 1310
HpyF10VI GCNNNNNNNGC 2 cut(s) 79, 1004
HpyF3I CTNAG 5 cut(s) 168, 300, 999, 1020, 1360
HpySE526I ACGT 1 cut(s) 1310
Hsp92I GRCGYC 1 cut(s) 230
Hsp92II CATG 3 cut(s) 147, 607, 1210
HspAI GCGC 4 cut(s) 76, 568, 653, 655
Kpn2I TCCGGA 1 cut(s) 319
KspI CCGCGG 1 cut(s) 102
Kzo9I GATC 4 cut(s) 487, 772, 940, 1315
LmnI GCTCC 3 cut(s) 39, 523, 1108
Lsp1109I GCAGC 1 cut(s) 635
LweI GCATC 2 cut(s) 466, 655
MaeI CTAG 4 cut(s) 584, 887, 945, 1053
MaeII ACGT 1 cut(s) 1310
MaeIII GTNAC 2 cut(s) 790, 829
MalI GATC 4 cut(s) 489, 774, 942, 1317
MboI GATC 4 cut(s) 487, 772, 940, 1315
MboII GAAGA 6 cut(s) 193, 218, 221, 370, 443, 1265
MflI RGATCY 1 cut(s) 1315
MhlI GDGCHC 2 cut(s) 345, 1021
MluCI AATT 8 cut(s) 33, 251, 434, 518, 714, 1325, 1344, 1365
MlyI GAGTC 2 cut(s) 54, 556
MmeI TCCRAC 2 cut(s) 1167, 1293
Mph1103I ATGCAT 2 cut(s) 145, 670
MroI TCCGGA 1 cut(s) 319
MroXI GAANNNNTTC 1 cut(s) 1344
MseI TTAA 3 cut(s) 648, 752, 1399
MslI CAYNNNNRTG 1 cut(s) 1205
MspA1I CMGCKG 1 cut(s) 101
MspI CCGG 1 cut(s) 320
MspR9I CCNGG 3 cut(s) 839, 905, 1107
Mva1269I GAATGC 3 cut(s) 145, 421, 1036
MvaI CCWGG 3 cut(s) 839, 905, 1107
MvnI CGCG 6 cut(s) 27, 76, 78, 101, 115, 655
MwoI GCNNNNNNNGC 2 cut(s) 79, 1004
NdeII GATC 4 cut(s) 487, 772, 940, 1315
NlaIII CATG 3 cut(s) 147, 607, 1210
NlaIV GGNNCC 1 cut(s) 1317
NsbI TGCGCA 1 cut(s) 569
NsiI ATGCAT 2 cut(s) 145, 670
NspI RCATGY 3 cut(s) 147, 607, 1210
NspV TTCGAA 1 cut(s) 413
PaeI GCATGC 1 cut(s) 1210
PalAI GGCGCGCC 1 cut(s) 653
PasI CCCWGGG 1 cut(s) 838
PauI GCGCGC 1 cut(s) 653
PceI AGGCCT 1 cut(s) 812
PcsI WCGNNNNNNNCGW 1 cut(s) 269
PctI GAATGC 3 cut(s) 145, 421, 1036
PdmI GAANNNNTTC 1 cut(s) 1344
PfeI GAWTC 3 cut(s) 186, 615, 781
PkrI GCNGC 7 cut(s) 26, 75, 100, 103, 130, 625, 997
PleI GAGTC 2 cut(s) 54, 556
PpsI GAGTC 2 cut(s) 54, 556
PsiI TTATAA 1 cut(s) 1092
Psp6I CCWGG 3 cut(s) 837, 903, 1105
PspFI CCCAGC 1 cut(s) 383
PspGI CCWGG 3 cut(s) 837, 903, 1105
PspN4I GGNNCC 1 cut(s) 1317
PsuI RGATCY 1 cut(s) 1315
PteI GCGCGC 1 cut(s) 653
RsaI GTAC 1 cut(s) 1111
RsaNI GTAC 1 cut(s) 1110
RseI CAYNNNNRTG 1 cut(s) 1205
SacII CCGCGG 1 cut(s) 102
SaqAI TTAA 3 cut(s) 648, 752, 1399
SatI GCNGC 7 cut(s) 25, 74, 99, 102, 129, 624, 996
Sau3AI GATC 4 cut(s) 487, 772, 940, 1315
SchI GAGTC 2 cut(s) 54, 556
ScrFI CCNGG 3 cut(s) 839, 905, 1107
SduI GDGCHC 2 cut(s) 345, 1021
SfaNI GCATC 2 cut(s) 466, 655
Sfr303I CCGCGG 1 cut(s) 102
SfuI TTCGAA 1 cut(s) 413
SgrBI CCGCGG 1 cut(s) 102
SgsI GGCGCGCC 1 cut(s) 653
SmiMI CAYNNNNRTG 1 cut(s) 1205
SmlI CTYRAG 1 cut(s) 160
SmoI CTYRAG 1 cut(s) 160
SphI GCATGC 1 cut(s) 1210
Sse9I AATT 8 cut(s) 33, 251, 434, 518, 714, 1325, 1344, 1365
SseBI AGGCCT 1 cut(s) 812
SspMI CTAG 4 cut(s) 584, 887, 945, 1053
StuI AGGCCT 1 cut(s) 812
StyD4I CCNGG 3 cut(s) 837, 903, 1105
StyI CCWWGG 1 cut(s) 886
TaaI ACNGT 1 cut(s) 469
TaiI ACGT 1 cut(s) 1313
TaqI TCGA 5 cut(s) 189, 413, 429, 815, 987
TasI AATT 8 cut(s) 33, 251, 434, 518, 714, 1325, 1344, 1365
TauI GCSGC 6 cut(s) 27, 76, 101, 104, 131, 998
TfiI GAWTC 3 cut(s) 186, 615, 781
Tru1I TTAA 3 cut(s) 648, 752, 1399
Tru9I TTAA 3 cut(s) 648, 752, 1399
TscAI CASTG 1 cut(s) 18
TseI GCWGC 1 cut(s) 623
TspDTI ATGAA 6 cut(s) 237, 263, 489, 566, 579, 673
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 1 cut(s) 18
XagI CCTNNNNNAGG 1 cut(s) 1232
XapI RAATTY 4 cut(s) 33, 251, 714, 1325
XceI RCATGY 3 cut(s) 147, 607, 1210
XcmI CCANNNNNNNNNTGG 1 cut(s) 1326
XmaJI CCTAGG 1 cut(s) 886
XmnI GAANNNNTTC 1 cut(s) 1344
XspI CTAG 4 cut(s) 584, 887, 945, 1053
Zsp2I ATGCAT 2 cut(s) 145, 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.