Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0016521

Physical Location & Seq

Genomic Coordinates Forward (+)

13586306 .. 13589870

Gene Structure 3565 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007102

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGATGGCTTCACTGCATTTCCGCGGCGTTAGAATTCGGAGCTATTCTGCAACTCCGAGACTCGCACACTCGCCGCGCGTGCGATGGCTGTCCGCCGTGGCCTCGCCGTCGCGGTCGTTGTATGCCGCGGTGGAGAATGCATGTAAAGGCGGAGGCTTGAGAGCTGAGAGACGGACGAAGAGAATCGAAGCTGTGGTTGGGGAAGAAGAGAAAGGTGATGAAACGGCGTCGTTTAGTTGCGTGATGAAATTCGGAGGGTCGTCGGTGGCGACGGCGGAGAGGATAAGAGAGATTGCTGAGCTGGTTGTGAGTTTTCCGGAGGAGAAGCCTGTGGTTGTGCTCTCTGCAATGGGGAAGACCACTAATAACCTCTTGCTTGCTGGGGAGAAAGCTGTCAGTTGCGGGGTTTCGAATGCTTCTGAAATTGAAGAATTGAGCTATGTAAAACAACTGCATCTCAAGACTGTTGATGAACTTGGAGTTGATCCTTCTGTTGTTTTGGGACACTTGCAAGAATTGGAGCAACTTCTGAAGGGGATAGCAATGATGAAAGAGTTGACTCTGCGCACAAGAGACTATCTAGTTTCATTTGGAGAGTGCATGTCCACACGAATCGTTGCAGCTTATCTGAATAAGATTGGTGTTAAGGCGCGCCAGTATGATGCATTTGACATTGGTTTCATAACAACAGATGACTTCACCAATGCTGAAATTTTGGAGGGAACTTACCCATCTGTTGCTAAAAGATTAAATGATGATTGGATTAGTGATCCTGCGATTCCCATTGTTACTGGCTTTCTCGGAAAGGCCTCAAAATCTCGTGCAGTTACTACCCTGGGTAGGGGTGGTAGTGATTTGACAGCCACAACCATTGGTAAAGCCCTAGGCTTGCGAGAAGTCCAGGTGTGGAAGGATGTTGATGGTGTTTTGACCTGCGATCCTAGTATATGTTCTAATGCACAACCTGTTCCTTATTTGACTTTCGATGAGGCGGCTGAGCTTGCATATTTTGGTGCTCAGGTTCTACATCCGCAATCTATGAGACCAGCTAGAGATGGCGATATTCCTGTTAGGGTCAAGAACTCTTATAACCCTAAAGCTCCTGGTACAATCATCACTAAAGCAAGAGATATGAGCAAGGCTGTTCTAACCAGCATAGTCCTGAAGCAAAATATCACTCTGTTGGATATTGTCAGCACACGCATGCTTGGTCAAGTTGGTTTTCTTGCAAAGGTGTTTTCAACCTTTGAAGATTTGGGCATATCTGTCGATGTTGTTGCAACAAGTGAAGTTAGTTTATCTTTGACGCTGGATCCATCAAAATTCTGGAGTAGAGAACTAATTCAGCAGGAACTTGACAAAATGGAGGAAGAACTTGAAAAAATTGCATACGTAAATCTTCTGCAGAAGAGATCAATCATCTCGCTCATAGGGAATGTTCAGTATTCTTCATTGATTCTAGAGAAGGCATTTCAAGTTCTTCGAACGAATCAAGTTAATGTGCAGATGATCTCACAAGGGGCATCTAAGGTAAACATCTCATTGATAGTAAATGACAGTGAAGCTGAAATCTGCGTGAAGGCCCTTCACCATGCCTTCTTTGAAAGCGGTGACCTGTCTGAATTAGTACTAGAAGGTGGATTCGGGAATGGCGCAGCTTCACCATTGCCGGTGGAAACATCCATGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004072 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016774 GO:0019202 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01210 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01210 map01230

Pfam Domains

Protein Families

AA_kinase

Protein Analysis

564

Amino Acids

61.26

Weight (kDa)

5.73

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	80 - 361	2.3e-48	Amino acid kinase family
ACT_9	PF22468	397 - 439	6.1e-06	ACT domain
ACT_9	PF22468	474 - 533	1.9e-14	ACT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016521)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13280
fragaria_vesca	FvH4_4g22800
malus_domestica	MD16G1129600.v1.1
prunus_persica	Prupe.1G216900_v2.0.a1
pyrus_communis	pycom16g10980
rosa_chinensis	RchiOBHm_Chr4g0429031
rosa_laevigata	RLG00000007102
rosa_multiflora	Rmu_sc0008629.1_g000018
rosa_roxburghii	Rroxscaffold_5G00370680
rosa_rugosa	Rorug04G0232200
rosa_samantha	Rh4AG288200 Rh4BG294400 Rh4DG291300
rosa_wichuraiana	Rw4G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1089
Acc16I	TGCGCA	1 cut(s)	566
Acc36I	ACCTGC	1 cut(s)	941
AccII	CGCG	6 cut(s)	24, 76, 78, 112, 128, 652
AccIII	TCCGGA	1 cut(s)	316
AclWI	GGATC	5 cut(s)	479, 764, 932, 1307, 1320
AcsI	RAATTY	4 cut(s)	33, 248, 711, 1322
AcuI	CTGAAG	2 cut(s)	551, 1184
AcyI	GRCGYC	1 cut(s)	227
AfaI	GTAC	2 cut(s)	1108, 1629
AfiI	CCNNNNNNNGG	2 cut(s)	840, 841
AgsI	TTSAA	6 cut(s)	428, 1242, 1250, 1379, 1475, 1604
AjnI	CCWGG	3 cut(s)	834, 900, 1102
AjuI	GAANNNNNNNTTGG	2 cut(s)	180, 212
Alw21I	GWGCWC	2 cut(s)	342, 1018
Alw26I	GTCTC	4 cut(s)	52, 163, 567, 1036
AlwI	GGATC	5 cut(s)	479, 764, 932, 1307, 1320
Aor13HI	TCCGGA	1 cut(s)	316
AoxI	GGCC	3 cut(s)	99, 807, 1581
ApeKI	GCWGC	2 cut(s)	620, 1655
ApoI	RAATTY	4 cut(s)	33, 248, 711, 1322
AscI	GGCGCGCC	1 cut(s)	650
Asp700I	GAANNNNTTC	1 cut(s)	1341
AspA2I	CCTAGG	1 cut(s)	883
AspLEI	GCGC	5 cut(s)	78, 567, 652, 654, 1655
AspS9I	GGNCC	1 cut(s)	1582
AsuHPI	GGTGA	5 cut(s)	227, 691, 1580, 1622, 1653
AsuII	TTCGAA	2 cut(s)	410, 1483
AvrII	CCTAGG	1 cut(s)	883
BamHI	GGATCC	1 cut(s)	1312
BauI	CACGAG	1 cut(s)	819
BbsI	GAAGAC	1 cut(s)	362
Bbv12I	GWGCWC	2 cut(s)	342, 1018
BbvI	GCAGC	2 cut(s)	632, 1667
BccI	CCATC	5 cut(s)	78, 739, 914, 1049, 1324
BceAI	ACGGC	4 cut(s)	80, 91, 240, 288
BcgI	CGANNNNNNTGC	4 cut(s)	1249, 1259, 1283, 1293
BciT130I	CCWGG	3 cut(s)	836, 902, 1104
BcoDI	GTCTC	4 cut(s)	52, 163, 567, 1036
BfaI	CTAG	6 cut(s)	581, 884, 942, 1050, 1460, 1631
BfmI	CTRYAG	1 cut(s)	1403
BfuAI	ACCTGC	1 cut(s)	941
BisI	GCNGC	6 cut(s)	25, 74, 126, 621, 993, 1656
BlnI	CCTAGG	1 cut(s)	883
BlpI	GCTNAGC	2 cut(s)	297, 996
BlsI	GCNGC	6 cut(s)	26, 75, 127, 622, 994, 1657
BmcAI	AGTACT	1 cut(s)	1629
Bme1390I	CCNGG	3 cut(s)	836, 902, 1104
BmgT120I	GGNCC	1 cut(s)	1582
BmiI	GGNNCC	1 cut(s)	1314
BmrFI	CCNGG	3 cut(s)	836, 902, 1104
BmsI	GCATC	3 cut(s)	463, 652, 1532
BpiI	GAAGAC	1 cut(s)	362
BpmI	CTGGAG	1 cut(s)	1348
Bpu10I	CCTNAGC	1 cut(s)	1017
Bpu1102I	GCTNAGC	2 cut(s)	297, 996
Bpu14I	TTCGAA	2 cut(s)	410, 1483
BpuEI	CTTGAG	2 cut(s)	178, 443
BsaAI	YACGTR	1 cut(s)	1393
BsaHI	GRCGYC	1 cut(s)	227
BsaI	GGTCTC	1 cut(s)	1036
BsaJI	CCNNGG	6 cut(s)	22, 96, 126, 834, 835, 883
BsaWI	WCCGGW	1 cut(s)	316
Bsc4I	CCNNNNNNNGG	2 cut(s)	840, 841
Bse118I	RCCGGY	1 cut(s)	1669
Bse1I	ACTGG	2 cut(s)	655, 796
Bse3DI	GCAATG	3 cut(s)	354, 549, 1664
BseAI	TCCGGA	1 cut(s)	316
BseBI	CCWGG	3 cut(s)	836, 902, 1104
BseDI	CCNNGG	6 cut(s)	22, 96, 126, 834, 835, 883
BseGI	GGATG	3 cut(s)	919, 1027, 1679
BseLI	CCNNNNNNNGG	2 cut(s)	840, 841
BseMI	GCAATG	3 cut(s)	354, 549, 1664
BseMII	CTCAG	4 cut(s)	156, 288, 987, 1031
BseNI	ACTGG	2 cut(s)	655, 796
BsePI	GCGCGC	1 cut(s)	650
BseRI	GAGGAG	1 cut(s)	335
BseXI	GCAGC	2 cut(s)	632, 1667
BseYI	CCCAGC	1 cut(s)	380
BsgI	GTGCAG	2 cut(s)	843, 1523
Bsh1236I	CGCG	6 cut(s)	24, 76, 78, 112, 128, 652
Bsh1285I	CGRYCG	1 cut(s)	116
BshFI	GGCC	3 cut(s)	101, 809, 1583
BsiEI	CGRYCG	1 cut(s)	116
BsiHKAI	GWGCWC	2 cut(s)	342, 1018
BsiSI	CCGG	2 cut(s)	317, 1670
BslFI	GGGAC	1 cut(s)	516
BslI	CCNNNNNNNGG	2 cut(s)	840, 841
BsmAI	GTCTC	4 cut(s)	52, 163, 567, 1036
BsmBI	CGTCTC	1 cut(s)	163
BsmFI	GGGAC	1 cut(s)	516
BsmI	GAATGC	2 cut(s)	142, 418
BsnI	GGCC	3 cut(s)	101, 809, 1583
Bso31I	GGTCTC	1 cut(s)	1036
Bsp119I	TTCGAA	2 cut(s)	410, 1483
Bsp1286I	GDGCHC	2 cut(s)	342, 1018
Bsp13I	TCCGGA	1 cut(s)	316
Bsp143I	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
Bsp1720I	GCTNAGC	2 cut(s)	297, 996
BspANI	GGCC	3 cut(s)	101, 809, 1583
BspCNI	CTCAG	4 cut(s)	157, 289, 988, 1030
BspEI	TCCGGA	1 cut(s)	316
BspFNI	CGCG	6 cut(s)	24, 76, 78, 112, 128, 652
BspLI	GGNNCC	1 cut(s)	1314
BspMAI	CTGCAG	1 cut(s)	1407
BspMI	ACCTGC	1 cut(s)	941
BspPI	GGATC	5 cut(s)	479, 764, 932, 1307, 1320
BspT104I	TTCGAA	2 cut(s)	410, 1483
BspTNI	GGTCTC	1 cut(s)	1036
BsrDI	GCAATG	3 cut(s)	354, 549, 1664
BsrFI	RCCGGY	1 cut(s)	1669
BsrI	ACTGG	2 cut(s)	655, 796
BssAI	RCCGGY	1 cut(s)	1669
BssECI	CCNNGG	6 cut(s)	22, 96, 126, 834, 835, 883
BssHII	GCGCGC	1 cut(s)	650
BssMI	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
BssNI	GRCGYC	1 cut(s)	227
BssSI	CACGAG	1 cut(s)	819
BssT1I	CCWWGG	1 cut(s)	883
Bst2BI	CACGAG	1 cut(s)	819
Bst2UI	CCWGG	3 cut(s)	836, 902, 1104
Bst4CI	ACNGT	2 cut(s)	466, 1559
Bst6I	CTCTTC	3 cut(s)	173, 201, 1403
BstACI	GRCGYC	1 cut(s)	227
BstBAI	YACGTR	1 cut(s)	1393
BstBI	TTCGAA	2 cut(s)	410, 1483
BstC8I	GCNNGC	6 cut(s)	80, 378, 652, 890, 1002, 1205
BstDEI	CTNAG	5 cut(s)	165, 297, 996, 1017, 1527
BstDSI	CCRYGG	3 cut(s)	22, 96, 126
BstEII	GGTNACC	1 cut(s)	1610
BstF5I	GGATG	3 cut(s)	919, 1027, 1679
BstFNI	CGCG	6 cut(s)	24, 76, 78, 112, 128, 652
BstHHI	GCGC	5 cut(s)	78, 567, 652, 654, 1655
BstKTI	GATC	6 cut(s)	487, 772, 940, 1315, 1415, 1512
BstMAI	GTCTC	4 cut(s)	52, 163, 567, 1036
BstMBI	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
BstMCI	CGRYCG	1 cut(s)	116
BstMWI	GCNNNNNNNGC	2 cut(s)	79, 1001
BstNI	CCWGG	3 cut(s)	836, 902, 1104
BstNSI	RCATGY	3 cut(s)	144, 604, 1207
BstPI	GGTNACC	1 cut(s)	1610
BstSCI	CCNGG	3 cut(s)	834, 900, 1102
BstSFI	CTRYAG	1 cut(s)	1403
BstSNI	TACGTA	1 cut(s)	1393
BstUI	CGCG	6 cut(s)	24, 76, 78, 112, 128, 652
BstV1I	GCAGC	2 cut(s)	632, 1667
BstV2I	GAAGAC	1 cut(s)	362
BstX2I	RGATCY	1 cut(s)	1312
BstYI	RGATCY	1 cut(s)	1312
BsuRI	GGCC	3 cut(s)	101, 809, 1583
BtgI	CCRYGG	3 cut(s)	22, 96, 126
BtgZI	GCGATG	1 cut(s)	97
BtsCI	GGATG	3 cut(s)	919, 1027, 1679
BtsI	GCAGTG	1 cut(s)	11
BtsIMutI	CAGTG	2 cut(s)	11, 1564
BveI	ACCTGC	1 cut(s)	941
Cac8I	GCNNGC	6 cut(s)	80, 378, 652, 890, 1002, 1205
CfoI	GCGC	5 cut(s)	78, 567, 652, 654, 1655
Cfr10I	RCCGGY	1 cut(s)	1669
Cfr13I	GGNCC	1 cut(s)	1582
Cfr42I	CCGCGG	2 cut(s)	25, 129
CseI	GACGC	2 cut(s)	216, 1315
Csp6I	GTAC	2 cut(s)	1107, 1628
CspCI	CAANNNNNGTGG	2 cut(s)	853, 888
CviAII	CATG	5 cut(s)	141, 601, 1204, 1592, 1684
CviQI	GTAC	2 cut(s)	1107, 1628
DdeI	CTNAG	5 cut(s)	165, 297, 996, 1017, 1527
DpnI	GATC	6 cut(s)	486, 771, 939, 1314, 1414, 1511
DpnII	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
Eam1104I	CTCTTC	3 cut(s)	173, 201, 1403
EarI	CTCTTC	3 cut(s)	173, 201, 1403
EciI	GGCGGA	3 cut(s)	82, 165, 290
Eco105I	TACGTA	1 cut(s)	1393
Eco130I	CCWWGG	1 cut(s)	883
Eco147I	AGGCCT	1 cut(s)	809
Eco31I	GGTCTC	1 cut(s)	1036
Eco57I	CTGAAG	2 cut(s)	551, 1184
Eco91I	GGTNACC	1 cut(s)	1610
EcoO109I	RGGNCCY	1 cut(s)	1582
EcoO65I	GGTNACC	1 cut(s)	1610
EcoRI	GAATTC	1 cut(s)	33
EcoRII	CCWGG	3 cut(s)	834, 900, 1102
EcoT14I	CCWWGG	1 cut(s)	883
EcoT22I	ATGCAT	2 cut(s)	142, 667
ErhI	CCWWGG	1 cut(s)	883
Esp3I	CGTCTC	1 cut(s)	163
FaeI	CATG	5 cut(s)	144, 604, 1207, 1595, 1687
FaqI	GGGAC	1 cut(s)	516
FatI	CATG	5 cut(s)	140, 600, 1203, 1591, 1683
FauI	CCCGC	1 cut(s)	395
Fnu4HI	GCNGC	6 cut(s)	25, 74, 126, 621, 993, 1656
FokI	GGATG	3 cut(s)	926, 1014, 1666
Fsp4HI	GCNGC	6 cut(s)	25, 74, 126, 621, 993, 1656
FspBI	CTAG	6 cut(s)	581, 884, 942, 1050, 1460, 1631
FspI	TGCGCA	1 cut(s)	566
GlaI	GCGC	5 cut(s)	77, 566, 651, 653, 1654
GluI	GCNGC	6 cut(s)	25, 74, 126, 621, 993, 1656
GsaI	CCCAGC	1 cut(s)	384
GsuI	CTGGAG	1 cut(s)	1348
HaeIII	GGCC	3 cut(s)	101, 809, 1583
HapII	CCGG	2 cut(s)	317, 1670
HgaI	GACGC	2 cut(s)	216, 1315
HhaI	GCGC	5 cut(s)	78, 567, 652, 654, 1655
Hin1I	GRCGYC	1 cut(s)	227
Hin1II	CATG	5 cut(s)	144, 604, 1207, 1595, 1687
Hin6I	GCGC	5 cut(s)	76, 565, 650, 652, 1653
HinP1I	GCGC	5 cut(s)	76, 565, 650, 652, 1653
HincII	GTYRAC	1 cut(s)	558
HindII	GTYRAC	1 cut(s)	558
HinfI	GANTC	8 cut(s)	60, 183, 559, 612, 778, 1456, 1489, 1641
HpaII	CCGG	2 cut(s)	317, 1670
HphI	GGTGA	5 cut(s)	227, 691, 1580, 1622, 1653
Hpy166II	GTNNAC	3 cut(s)	558, 606, 1534
Hpy188I	TCNGA	8 cut(s)	39, 57, 254, 421, 531, 630, 803, 1621
Hpy188III	TCNNGA	7 cut(s)	317, 460, 1078, 1162, 1327, 1460, 1645
Hpy8I	GTNNAC	3 cut(s)	558, 606, 1534
Hpy99I	CGWCG	4 cut(s)	112, 232, 265, 274
HpyAV	CCTTC	8 cut(s)	498, 526, 904, 1459, 1573, 1595, 1606, 1628
HpyCH4III	ACNGT	2 cut(s)	466, 1559
HpyCH4IV	ACGT	1 cut(s)	1392
HpyF10VI	GCNNNNNNNGC	2 cut(s)	79, 1001
HpyF3I	CTNAG	5 cut(s)	165, 297, 996, 1017, 1527
HpySE526I	ACGT	1 cut(s)	1392
Hsp92I	GRCGYC	1 cut(s)	227
Hsp92II	CATG	5 cut(s)	144, 604, 1207, 1595, 1687
HspAI	GCGC	5 cut(s)	76, 565, 650, 652, 1653
Kpn2I	TCCGGA	1 cut(s)	316
KspI	CCGCGG	2 cut(s)	25, 129
Kzo9I	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
LmnI	GCTCC	3 cut(s)	39, 520, 1105
Lsp1109I	GCAGC	2 cut(s)	632, 1667
LweI	GCATC	3 cut(s)	463, 652, 1532
MaeI	CTAG	6 cut(s)	581, 884, 942, 1050, 1460, 1631
MaeII	ACGT	1 cut(s)	1392
MaeIII	GTNAC	3 cut(s)	787, 826, 1610
MalI	GATC	6 cut(s)	486, 771, 939, 1314, 1414, 1511
MboI	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
MflI	RGATCY	1 cut(s)	1312
MhlI	GDGCHC	2 cut(s)	342, 1018
MlyI	GAGTC	2 cut(s)	54, 553
MmeI	TCCRAC	1 cut(s)	1164
Mph1103I	ATGCAT	2 cut(s)	142, 667
MroI	TCCGGA	1 cut(s)	316
MroXI	GAANNNNTTC	1 cut(s)	1341
MseI	TTAA	3 cut(s)	645, 749, 1497
MslI	CAYNNNNRTG	1 cut(s)	1202
MspA1I	CMGCKG	2 cut(s)	24, 128
MspI	CCGG	2 cut(s)	317, 1670
MspR9I	CCNGG	3 cut(s)	836, 902, 1104
Mva1269I	GAATGC	2 cut(s)	142, 418
MvaI	CCWGG	3 cut(s)	836, 902, 1104
MvnI	CGCG	6 cut(s)	24, 76, 78, 112, 128, 652
MwoI	GCNNNNNNNGC	2 cut(s)	79, 1001
NdeII	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
NlaIII	CATG	5 cut(s)	144, 604, 1207, 1595, 1687
NlaIV	GGNNCC	1 cut(s)	1314
NmuCI	GTSAC	1 cut(s)	1610
NsbI	TGCGCA	1 cut(s)	566
NsiI	ATGCAT	2 cut(s)	142, 667
NspI	RCATGY	3 cut(s)	144, 604, 1207
NspV	TTCGAA	2 cut(s)	410, 1483
PaeI	GCATGC	1 cut(s)	1207
PalAI	GGCGCGCC	1 cut(s)	650
PasI	CCCWGGG	1 cut(s)	835
PauI	GCGCGC	1 cut(s)	650
PceI	AGGCCT	1 cut(s)	809
PcsI	WCGNNNNNNNCGW	1 cut(s)	266
PctI	GAATGC	2 cut(s)	142, 418
PdmI	GAANNNNTTC	1 cut(s)	1341
PfeI	GAWTC	6 cut(s)	183, 612, 778, 1456, 1489, 1641
PkrI	GCNGC	6 cut(s)	26, 75, 127, 622, 994, 1657
PleI	GAGTC	2 cut(s)	54, 553
PpsI	GAGTC	2 cut(s)	54, 553
Ppu21I	YACGTR	1 cut(s)	1393
PsiI	TTATAA	1 cut(s)	1089
Psp6I	CCWGG	3 cut(s)	834, 900, 1102
PspEI	GGTNACC	1 cut(s)	1610
PspFI	CCCAGC	1 cut(s)	380
PspGI	CCWGG	3 cut(s)	834, 900, 1102
PspN4I	GGNNCC	1 cut(s)	1314
PspPI	GGNCC	1 cut(s)	1582
PstI	CTGCAG	1 cut(s)	1407
PsuI	RGATCY	1 cut(s)	1312
PteI	GCGCGC	1 cut(s)	650
RsaI	GTAC	2 cut(s)	1108, 1629
RsaNI	GTAC	2 cut(s)	1107, 1628
RseI	CAYNNNNRTG	1 cut(s)	1202
SacII	CCGCGG	2 cut(s)	25, 129
SaqAI	TTAA	3 cut(s)	645, 749, 1497
SatI	GCNGC	6 cut(s)	25, 74, 126, 621, 993, 1656
Sau3AI	GATC	6 cut(s)	484, 769, 937, 1312, 1412, 1509
Sau96I	GGNCC	1 cut(s)	1582
ScaI	AGTACT	1 cut(s)	1629
SchI	GAGTC	2 cut(s)	54, 553
ScrFI	CCNGG	3 cut(s)	836, 902, 1104
SduI	GDGCHC	2 cut(s)	342, 1018
SfaNI	GCATC	3 cut(s)	463, 652, 1532
SfcI	CTRYAG	1 cut(s)	1403
Sfr303I	CCGCGG	2 cut(s)	25, 129
SfuI	TTCGAA	2 cut(s)	410, 1483
SgrBI	CCGCGG	2 cut(s)	25, 129
SgsI	GGCGCGCC	1 cut(s)	650
SmiMI	CAYNNNNRTG	1 cut(s)	1202
SmlI	CTYRAG	2 cut(s)	157, 458
SmoI	CTYRAG	2 cut(s)	157, 458
SnaBI	TACGTA	1 cut(s)	1393
SphI	GCATGC	1 cut(s)	1207
SseBI	AGGCCT	1 cut(s)	809
SspMI	CTAG	6 cut(s)	581, 884, 942, 1050, 1460, 1631
StuI	AGGCCT	1 cut(s)	809
StyD4I	CCNGG	3 cut(s)	834, 900, 1102
StyI	CCWWGG	1 cut(s)	883
TaaI	ACNGT	2 cut(s)	466, 1559
TaiI	ACGT	1 cut(s)	1395
TaqI	TCGA	5 cut(s)	186, 410, 984, 1269, 1483
TatI	WGTACW	1 cut(s)	1627
TauI	GCSGC	4 cut(s)	27, 76, 128, 995
TfiI	GAWTC	6 cut(s)	183, 612, 778, 1456, 1489, 1641
Tru1I	TTAA	3 cut(s)	645, 749, 1497
Tru9I	TTAA	3 cut(s)	645, 749, 1497
TscAI	CASTG	2 cut(s)	18, 1564
TseFI	GTSAC	1 cut(s)	1610
TseI	GCWGC	2 cut(s)	620, 1655
Tsp45I	GTSAC	1 cut(s)	1610
TspDTI	ATGAA	7 cut(s)	234, 260, 486, 563, 576, 670, 1440
TspGWI	ACGGA	1 cut(s)	187
TspRI	CASTG	2 cut(s)	18, 1564
XapI	RAATTY	4 cut(s)	33, 248, 711, 1322
XbaI	TCTAGA	1 cut(s)	1459
XceI	RCATGY	3 cut(s)	144, 604, 1207
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1323
XmaJI	CCTAGG	1 cut(s)	883
XmnI	GAANNNNTTC	1 cut(s)	1341
XspI	CTAG	6 cut(s)	581, 884, 942, 1050, 1460, 1631
ZrmI	AGTACT	1 cut(s)	1629
Zsp2I	ATGCAT	2 cut(s)	142, 667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.