MD17G1130800.v1.1

Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0013307
Physical Location & Seq
Forward (+)
11523615 .. 11524865
1251 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1130800.v1.1.491

Sequence Viewer

Length: 1251 bp
ATGGCCAAACCACACTCTCACTCCCCACTCCCACTCTCACTCCTCCTCCTCCTCCTCTCACTCCTCACTCCCTCCCTCCAACGAACCCAGAAACTCTCCCCCGTCGATCTCCGCGCCCTCATCGCAATCAAAAACTCTCTCACCGACGTCCCTTCCCGCCGTGGCTCCCCCGCCGTATTCTTCTCCACCTGGGACTTCTCCGCCCCCGACCCCTGCTCCACCTTCTCCGGCCTCACCTGCGCTTCCGGCCGAATCACTACCCTCACCCTCGGCACTGGCCTCTCCGACTCCCGCGGTCTTGCCGGGTCGCTCCCGCCCTCCATCGCCGACCTCACCGAGTTAACTCAGCTCATCCTCTTGCCCGGAATCGTCACCGGTCCGATCCCGTTTCAGCTCGGCTGGCTCGCCAGCCTCCGTGTCATCTCCCTAACCAACAACCGTCTCACCGGCCCGATTCCTCAGTCCCTCTCTCTCCTCACCAATCTCCACACCCTCGACCTCAGCTACAACAGCCTCGCCGGCCCTATCCCGCCCGGTTTGACCCAGTTACCCAACCTCAAGGTCCTGATCCTCGCCTCCAATTCCCTCTCCGGCGAGGTCCCCTACAATGTGTCGTCCCAGCTACTTCACTTGGACTTCAACCGCAACGGCCTCACCGGCCCGTTACCACCCTCTCTCCCGACGACCCTCCGTTACGTGTCGCTCTCGGAAAACGACATGTCGGGCCCCATCGGCTCCGTCTTTGACTCGCTCGCCGATTTGGTCCACCTCAATCTCGGGTCCAACCGTTTAAGTGGGCCTCTCCCTCAAGCTCTGTTCCGCACGACCCTCCAGTCCCTTCTGTTGCAACGGAACAATCTCTCGGGGTGGGTCCCGCAAGCAGGGTCCCAGCCCCCATCGTACGGTGAGGGTTCGATCGTGGATTTGAGCCACAATGTCATAACGGGTGAGCTGTCGCCGATCTTGGCGGGCGTGGAGAGCTTGTATTTGAATAACAACCGTCTGATCGGAACGGTGCCGAGGGAGTACGTTAAGAGCGTTTACGTGGGGACCACCAGAACGCTGTACCTGCAGCACAATTACATTTCCCGGTTCCCGGTCGAGCCCGGGTCGATGTTGCCCGATACAGTGTCGTTGTGCTTGAGTTACAACTGCATGGTGCCGCCCGTGGGGATGGAGGCGTGCCCGGCCAGCGCGGGAACGGAGCTGTCCCGGCCGGCATCGCAGTGTTCGGTGTTTAACTACGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

417

Amino Acids

44.32

Weight (kDa)

7.04

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013307)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17640
fragaria_vesca FvH4_6g39240
malus_domestica MD09G1144100.v1.1 MD17G1130800.v1.1
prunus_persica Prupe.3G183800_v2.0.a1
pyrus_communis pycom09g06350 pycom17g12320
rosa_chinensis RchiOBHm_Chr2g0153081
rosa_laevigata RLG00000020675
rosa_multiflora Rmu_sc0000218.1_g000028 Rmu_sc0036105.1_g000001
rosa_roxburghii Rroxscaffold_2G00095210
rosa_rugosa Rorug02G0437200
rosa_samantha Rh2AG499400 Rh2BG510700 Rh2CG485800 Rh2DG522400
rosa_wichuraiana Rw2G040990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 245
AasI GACNNNNNNGTC 1 cut(s) 832
AatII GACGTC 1 cut(s) 150
Acc36I ACCTGC 2 cut(s) 245, 1077
AccB1I GGYRCC 2 cut(s) 1015, 1159
AccII CGCG 3 cut(s) 114, 294, 1196
AclWI GGATC 2 cut(s) 376, 562
AcoI YGGCCR 4 cut(s) 3, 247, 1188, 1214
AcyI GRCGYC 1 cut(s) 147
AfaI GTAC 3 cut(s) 902, 1028, 1067
AfiI CCNNNNNNNGG 4 cut(s) 881, 902, 1096, 1169
AflIII ACRYGT 2 cut(s) 696, 717
AgeI ACCGGT 1 cut(s) 374
AgsI TTSAA 2 cut(s) 640, 991
AjnI CCWGG 1 cut(s) 188
AluBI AGCT 8 cut(s) 349, 394, 504, 622, 812, 952, 981, 1207
AluI AGCT 8 cut(s) 349, 394, 504, 622, 812, 952, 981, 1207
Alw26I GTCTC 1 cut(s) 446
AlwI GGATC 2 cut(s) 376, 562
Ama87I CYCGRG 3 cut(s) 776, 862, 1106
ApaI GGGCCC 1 cut(s) 728
ApeKI GCWGC 1 cut(s) 1072
AsiGI ACCGGT 1 cut(s) 374
AspLEI GCGC 3 cut(s) 116, 242, 1196
AsuC2I CCSGG 9 cut(s) 304, 363, 534, 1090, 1097, 1107, 1108, 1187, 1213
AvaI CYCGRG 3 cut(s) 776, 862, 1106
AvaII GGWCC 8 cut(s) 377, 562, 598, 763, 780, 871, 885, 1050
BaeGI GKGCMC 2 cut(s) 728, 1187
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 1015, 1159
BanII GRGCYC 2 cut(s) 728, 1107
BbvCI CCTCAGC 1 cut(s) 500
BbvI GCAGC 1 cut(s) 1084
BccI CCATC 4 cut(s) 329, 737, 904, 1168
BceAI ACGGC 3 cut(s) 144, 158, 664
BciT130I CCWGG 1 cut(s) 190
BcnI CCSGG 9 cut(s) 304, 363, 534, 1090, 1097, 1107, 1108, 1187, 1213
BcoDI GTCTC 1 cut(s) 446
BfmI CTRYAG 1 cut(s) 1070
BfuAI ACCTGC 2 cut(s) 245, 1077
BglI GCCNNNNNGGC 3 cut(s) 519, 657, 732
BisI GCNGC 2 cut(s) 1073, 1163
BlsI GCNGC 2 cut(s) 1074, 1164
Bme18I GGWCC 8 cut(s) 377, 562, 598, 763, 780, 871, 885, 1050
BmeT110I CYCGRG 3 cut(s) 776, 862, 1106
BmrI ACTGGG 1 cut(s) 538
BmsI GCATC 1 cut(s) 1229
BmuI ACTGGG 1 cut(s) 538
BpmI CTGGAG 1 cut(s) 815
Bpu10I CCTNAGC 1 cut(s) 500
BpuEI CTTGAG 3 cut(s) 542, 792, 1162
BpuMI CCSGG 9 cut(s) 304, 363, 534, 1090, 1097, 1107, 1108, 1187, 1213
BsaAI YACGTR 2 cut(s) 697, 1045
BsaHI GRCGYC 1 cut(s) 147
BsaJI CCNNGG 7 cut(s) 160, 189, 268, 292, 1019, 1106, 1167
BsaWI WCCGGW 1 cut(s) 374
Bsc4I CCNNNNNNNGG 4 cut(s) 881, 902, 1096, 1169
Bse118I RCCGGY 5 cut(s) 374, 446, 518, 656, 1216
Bse1I ACTGG 3 cut(s) 280, 544, 832
BseBI CCWGG 1 cut(s) 190
BseDI CCNNGG 7 cut(s) 160, 189, 268, 292, 1019, 1106, 1167
BseGI GGATG 2 cut(s) 351, 1179
BseLI CCNNNNNNNGG 4 cut(s) 881, 902, 1096, 1169
BseMII CTCAG 3 cut(s) 359, 473, 514
BseNI ACTGG 3 cut(s) 280, 544, 832
BseRI GAGGAG 7 cut(s) 32, 35, 38, 41, 44, 53, 464
BseSI GKGCMC 2 cut(s) 728, 1187
BseX3I CGGCCG 2 cut(s) 247, 1214
BseXI GCAGC 1 cut(s) 1084
BseYI CCCAGC 2 cut(s) 618, 888
Bsh1236I CGCG 3 cut(s) 114, 294, 1196
Bsh1285I CGRYCG 4 cut(s) 250, 918, 1101, 1217
BshNI GGYRCC 2 cut(s) 1015, 1159
BshTI ACCGGT 1 cut(s) 374
BsiEI CGRYCG 4 cut(s) 250, 918, 1101, 1217
BsiHKCI CYCGRG 3 cut(s) 776, 862, 1106
BsiWI CGTACG 1 cut(s) 900
BslI CCNNNNNNNGG 4 cut(s) 881, 902, 1096, 1169
BsmAI GTCTC 1 cut(s) 446
BsmBI CGTCTC 1 cut(s) 446
BsoBI CYCGRG 3 cut(s) 776, 862, 1106
Bsp120I GGGCCC 1 cut(s) 724
Bsp1286I GDGCHC 3 cut(s) 728, 1107, 1187
Bsp143I GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
BspCNI CTCAG 3 cut(s) 358, 472, 513
BspFNI CGCG 3 cut(s) 114, 294, 1196
BspMAI CTGCAG 1 cut(s) 1074
BspMI ACCTGC 2 cut(s) 245, 1077
BspPI GGATC 2 cut(s) 376, 562
BspT107I GGYRCC 2 cut(s) 1015, 1159
BsrFI RCCGGY 5 cut(s) 374, 446, 518, 656, 1216
BsrI ACTGG 3 cut(s) 280, 544, 832
BssAI RCCGGY 5 cut(s) 374, 446, 518, 656, 1216
BssECI CCNNGG 7 cut(s) 160, 189, 268, 292, 1019, 1106, 1167
BssMI GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
BssNI GRCGYC 1 cut(s) 147
Bst2UI CCWGG 1 cut(s) 190
Bst4CI ACNGT 6 cut(s) 440, 788, 905, 1001, 1015, 1129
BstACI GRCGYC 1 cut(s) 147
BstBAI YACGTR 2 cut(s) 697, 1045
BstDEI CTNAG 3 cut(s) 345, 459, 500
BstDSI CCRYGG 3 cut(s) 160, 292, 1167
BstF5I GGATG 2 cut(s) 351, 1179
BstFNI CGCG 3 cut(s) 114, 294, 1196
BstHHI GCGC 3 cut(s) 116, 242, 1196
BstKTI GATC 6 cut(s) 109, 384, 570, 918, 963, 1008
BstMAI GTCTC 1 cut(s) 446
BstMBI GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
BstMCI CGRYCG 4 cut(s) 250, 918, 1101, 1217
BstNI CCWGG 1 cut(s) 190
BstNSI RCATGY 1 cut(s) 721
BstSFI CTRYAG 1 cut(s) 1070
BstSLI GKGCMC 2 cut(s) 728, 1187
BstUI CGCG 3 cut(s) 114, 294, 1196
BstV1I GCAGC 1 cut(s) 1084
BstZI CGGCCG 2 cut(s) 247, 1214
BtgI CCRYGG 3 cut(s) 160, 292, 1167
BtgZI GCGATG 3 cut(s) 106, 307, 1206
BtsCI GGATG 2 cut(s) 351, 1179
BtsI GCAGTG 1 cut(s) 1232
BtsIMutI CAGTG 3 cut(s) 273, 1134, 1232
BveI ACCTGC 2 cut(s) 245, 1077
CfoI GCGC 3 cut(s) 116, 242, 1196
Cfr10I RCCGGY 5 cut(s) 374, 446, 518, 656, 1216
Cfr42I CCGCGG 1 cut(s) 295
Cfr9I CCCGGG 1 cut(s) 1106
CpoI CGGWCCG 1 cut(s) 377
Csp6I GTAC 3 cut(s) 901, 1027, 1066
CspAI ACCGGT 1 cut(s) 374
CspI CGGWCCG 1 cut(s) 377
CviAII CATG 2 cut(s) 718, 1156
CviQI GTAC 3 cut(s) 901, 1027, 1066
DdeI CTNAG 3 cut(s) 345, 459, 500
DpnI GATC 6 cut(s) 108, 383, 569, 917, 962, 1007
DpnII GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
DrdI GACNNNNNNGTC 1 cut(s) 832
DseDI GACNNNNNNGTC 1 cut(s) 832
EaeI YGGCCR 4 cut(s) 3, 247, 1188, 1214
EagI CGGCCG 2 cut(s) 247, 1214
EciI GGCGGA 1 cut(s) 190
EclXI CGGCCG 2 cut(s) 247, 1214
Eco24I GRGCYC 2 cut(s) 728, 1107
Eco47I GGWCC 8 cut(s) 377, 562, 598, 763, 780, 871, 885, 1050
Eco52I CGGCCG 2 cut(s) 247, 1214
Eco88I CYCGRG 3 cut(s) 776, 862, 1106
EcoO109I RGGNCCY 5 cut(s) 562, 598, 725, 871, 885
EcoRII CCWGG 1 cut(s) 188
EcoT38I GRGCYC 2 cut(s) 728, 1107
Esp3I CGTCTC 1 cut(s) 446
FaeI CATG 2 cut(s) 721, 1159
FaiI YATR 3 cut(s) 719, 941, 1157
FatI CATG 2 cut(s) 717, 1155
FauI CCCGC 8 cut(s) 164, 178, 299, 321, 537, 882, 961, 1189
Fnu4HI GCNGC 2 cut(s) 1073, 1163
FokI GGATG 2 cut(s) 338, 1186
FriOI GRGCYC 2 cut(s) 728, 1107
Fsp4HI GCNGC 2 cut(s) 1073, 1163
GlaI GCGC 3 cut(s) 115, 241, 1195
GluI GCNGC 2 cut(s) 1073, 1163
GsaI CCCAGC 2 cut(s) 622, 892
GsuI CTGGAG 1 cut(s) 815
HhaI GCGC 3 cut(s) 116, 242, 1196
Hin1I GRCGYC 1 cut(s) 147
Hin1II CATG 2 cut(s) 721, 1159
Hin6I GCGC 3 cut(s) 114, 240, 1194
HinP1I GCGC 3 cut(s) 114, 240, 1194
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HinfI GANTC 5 cut(s) 252, 287, 366, 454, 746
HpaI GTTAAC 1 cut(s) 342
Hpy166II GTNNAC 3 cut(s) 342, 766, 1042
Hpy188I TCNGA 5 cut(s) 286, 381, 709, 1005, 1010
Hpy188III TCNNGA 2 cut(s) 565, 679
Hpy8I GTNNAC 3 cut(s) 342, 766, 1042
Hpy99I CGWCG 3 cut(s) 107, 149, 685
HpyAV CCTTC 3 cut(s) 162, 232, 848
HpyCH4III ACNGT 6 cut(s) 440, 788, 905, 1001, 1015, 1129
HpyCH4IV ACGT 4 cut(s) 147, 696, 1029, 1044
HpyCH4V TGCA 3 cut(s) 847, 1072, 1155
HpyF3I CTNAG 3 cut(s) 345, 459, 500
HpySE526I ACGT 4 cut(s) 147, 696, 1029, 1044
Hsp92I GRCGYC 1 cut(s) 147
Hsp92II CATG 2 cut(s) 721, 1159
HspAI GCGC 3 cut(s) 114, 240, 1194
KflI GGGWCCC 2 cut(s) 871, 885
KroI GCCGGC 2 cut(s) 518, 1216
KroNI GCCGGC 2 cut(s) 520, 1218
KspAI GTTAAC 1 cut(s) 342
KspI CCGCGG 1 cut(s) 295
Kzo9I GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
LmnI GCTCC 5 cut(s) 170, 221, 315, 740, 1204
Lsp1109I GCAGC 1 cut(s) 1084
LweI GCATC 1 cut(s) 1229
MaeII ACGT 4 cut(s) 147, 696, 1029, 1044
MaeIII GTNAC 5 cut(s) 370, 546, 663, 692, 1145
MalI GATC 6 cut(s) 108, 383, 569, 917, 962, 1007
MboI GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
MboII GAAGA 1 cut(s) 172
MhlI GDGCHC 3 cut(s) 728, 1107, 1187
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 580, 1078
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 281, 740
MmeI TCCRAC 3 cut(s) 103, 309, 807
Mox20I TGGCCA 1 cut(s) 5
MroNI GCCGGC 2 cut(s) 518, 1216
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 341, 791, 1032, 1239
MslI CAYNNNNRTG 1 cut(s) 1225
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 294
MvaI CCWGG 1 cut(s) 190
MvnI CGCG 3 cut(s) 114, 294, 1196
NaeI GCCGGC 2 cut(s) 520, 1218
NciI CCSGG 9 cut(s) 304, 363, 534, 1090, 1097, 1107, 1108, 1187, 1213
NdeII GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
NgoMIV GCCGGC 2 cut(s) 518, 1216
NlaIII CATG 2 cut(s) 721, 1159
NmeAIII GCCGAG 3 cut(s) 249, 375, 1044
NmuCI GTSAC 1 cut(s) 370
NspI RCATGY 1 cut(s) 721
PaqCI CACCTGC 1 cut(s) 245
PciI ACATGT 1 cut(s) 717
PcsI WCGNNNNNNNCGW 1 cut(s) 1035
PdiI GCCGGC 2 cut(s) 520, 1218
PfeI GAWTC 3 cut(s) 252, 366, 454
Pfl23II CGTACG 1 cut(s) 900
PinAI ACCGGT 1 cut(s) 374
PkrI GCNGC 2 cut(s) 1074, 1164
Ple19I CGATCG 1 cut(s) 918
PleI GAGTC 2 cut(s) 281, 740
PpsI GAGTC 2 cut(s) 281, 740
Ppu21I YACGTR 2 cut(s) 697, 1045
PpuMI RGGWCCY 4 cut(s) 562, 598, 871, 885
PscI ACATGT 1 cut(s) 717
Psp5II RGGWCCY 4 cut(s) 562, 598, 871, 885
Psp6I CCWGG 1 cut(s) 188
PspFI CCCAGC 2 cut(s) 618, 888
PspGI CCWGG 1 cut(s) 188
PspLI CGTACG 1 cut(s) 900
PspOMI GGGCCC 1 cut(s) 724
PspPPI RGGWCCY 4 cut(s) 562, 598, 871, 885
PstI CTGCAG 1 cut(s) 1074
PvuI CGATCG 1 cut(s) 918
RsaI GTAC 3 cut(s) 902, 1028, 1067
RsaNI GTAC 3 cut(s) 901, 1027, 1066
RseI CAYNNNNRTG 1 cut(s) 1225
Rsr2I CGGWCCG 1 cut(s) 377
RsrII CGGWCCG 1 cut(s) 377
SacII CCGCGG 1 cut(s) 295
SaqAI TTAA 4 cut(s) 341, 791, 1032, 1239
SatI GCNGC 2 cut(s) 1073, 1163
Sau3AI GATC 6 cut(s) 106, 381, 567, 915, 960, 1005
SchI GAGTC 2 cut(s) 281, 740
SduI GDGCHC 3 cut(s) 728, 1107, 1187
SfaNI GCATC 1 cut(s) 1229
SfcI CTRYAG 1 cut(s) 1070
SfiI GGCCNNNNNGGCC 1 cut(s) 657
Sfr303I CCGCGG 1 cut(s) 295
SgrBI CCGCGG 1 cut(s) 295
SinI GGWCC 8 cut(s) 377, 562, 598, 763, 780, 871, 885, 1050
SmaI CCCGGG 1 cut(s) 1108
SmiMI CAYNNNNRTG 1 cut(s) 1225
SmlI CTYRAG 3 cut(s) 557, 807, 1141
SmoI CTYRAG 3 cut(s) 557, 807, 1141
Sse9I AATT 2 cut(s) 580, 1078
TaaI ACNGT 6 cut(s) 440, 788, 905, 1001, 1015, 1129
TaiI ACGT 4 cut(s) 150, 699, 1032, 1047
TaqI TCGA 5 cut(s) 105, 495, 914, 1101, 1112
TasI AATT 2 cut(s) 580, 1078
TauI GCSGC 1 cut(s) 1165
TfiI GAWTC 3 cut(s) 252, 366, 454
Tru1I TTAA 4 cut(s) 341, 791, 1032, 1239
Tru9I TTAA 4 cut(s) 341, 791, 1032, 1239
TscAI CASTG 3 cut(s) 280, 1134, 1232
TseFI GTSAC 1 cut(s) 370
TseI GCWGC 1 cut(s) 1072
Tsp45I GTSAC 1 cut(s) 370
TspGWI ACGGA 5 cut(s) 404, 680, 727, 865, 1217
TspMI CCCGGG 1 cut(s) 1106
TspRI CASTG 3 cut(s) 280, 1134, 1232
VpaK11BI GGWCC 8 cut(s) 377, 562, 598, 763, 780, 871, 885, 1050
XceI RCATGY 1 cut(s) 721
XmaI CCCGGG 1 cut(s) 1106
ZraI GACGTC 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.