Prupe.3G183800_v2.0.a1

Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0013307
Physical Location & Seq
Reverse (-)
19899175 .. 19900852
1678 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G183800.1

Sequence Viewer

Length: 1260 bp
ATGGCGGCCAAACAACATGCACACTCCTCACTCCCACTTCCACTTCTTCTTCTCCTCCTCCTCCTTCTCAATCTCACTCCACCGTCGCATCAACAACAAAACCAGAAAATCAGCACCGTCGATCTCCACGCCCTCACCGCCATCAAGAACTCCCTCACCGATGTCCCCTTCCGAGGTGCCACAGCATTCTTCTCCACCTGGGACTTCGCCGCACCAGATCCCTGCTCCACCTTCTCCGGCGTCACCTGCACCTCCGGCCGAGTCACCACCCTCACTCTCGGCACTGGCCTCTCCGACTCGCCCGGCCTCGCCGGGTCGCTCCCTCCCTCCCTCGCCGACCTCACCGAGTTGACTCAGCTCATCCTCTTCCCCGGAATCGTCACAGGTCCAATCCCGTTCCAACTCGGCCGACTCGCCAACCTCCGAGTCATCTCGTTAACCAACAACCGCCTCACCGGTCCGATTCCCCAGACCATCTCTCTCCTCTCCAACCTCCACACCCTCGACCTCAGCTACAACCGGCTCACCGGGTCAATCCCCTCGGGTCTGACCCGTTTACCGGCTCTGAAAGTCCTCATCCTCGCCTCCAACTCCCTCTCCGGCGAGCTGCCGCACGACGTGTTGTCTCAACTCCTTCACCTGGACTTAAAACGCAACAAGCTCACCGGTCCCTTACCGCCCTCTCTCCCGACGACGCTCCGTTACTTGTCGTTCTCGGAAAACGAAATGTCGGGTCCCATCGGCTCCCTCTTCGACTCGCTCGCCGATGTAGTCCACCTCGATCTCGGCATGAACCGTCTCAGTGGACCCCTCCCTCAAACTCTGTTCCGTACCACACTCCAGTCGCTGCTGTTGCAACGGAACAATCTCTCCGGGTGGGTCCCGCCCGTGGAGTCCCAGCCCCCATCCTACGGCGAGGGCTCGATCGTGGATTTGAGCCACAACTCCATAACGGGTGAGCTGTCGCCGATCCTGGCGGGGGTGGAGAGCTTGTTTTTGAATAACAACCGTCTGATTGGGAACGTACCGAGGGAGTACGTTAAGAGCGTGTACGTGGGCACCACCAGAACATTGTATTTACAGCACAATTACTTATCCGGGTTCCATGTTGAGCCGGGGTCGATGTTGCCCGATACGGTGTCGTTGTGCTTGAGTTACAACTGCATGGTGCCCCAGGTGGGGATGGAGGCGTGCCCGGCCAGTGCGGGAACGGAGCTGTCGAGGCCGGCGTCGCAGTGTTCGGTGTTCACTTACGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

420

Amino Acids

44.9

Weight (kDa)

6.4

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013307)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17640
fragaria_vesca FvH4_6g39240
malus_domestica MD09G1144100.v1.1 MD17G1130800.v1.1
prunus_persica Prupe.3G183800_v2.0.a1
pyrus_communis pycom09g06350 pycom17g12320
rosa_chinensis RchiOBHm_Chr2g0153081
rosa_laevigata RLG00000020675
rosa_multiflora Rmu_sc0000218.1_g000028 Rmu_sc0036105.1_g000001
rosa_roxburghii Rroxscaffold_2G00095210
rosa_rugosa Rorug02G0437200
rosa_samantha Rh2AG499400 Rh2BG510700 Rh2CG485800 Rh2DG522400
rosa_wichuraiana Rw2G040990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 254
Acc36I ACCTGC 1 cut(s) 254
AccB1I GGYRCC 3 cut(s) 176, 1058, 1168
AciI CCGC 9 cut(s) 5, 138, 210, 448, 611, 677, 884, 977, 1205
AclWI GGATC 2 cut(s) 212, 964
AcoI YGGCCR 4 cut(s) 6, 256, 406, 1197
AcyI GRCGYC 2 cut(s) 240, 1229
AdeI CACNNNGTG 1 cut(s) 619
AfaI GTAC 4 cut(s) 832, 1026, 1037, 1052
AfiI CCNNNNNNNGG 8 cut(s) 173, 559, 640, 889, 911, 979, 1178, 1179
AflIII ACRYGT 1 cut(s) 618
AgeI ACCGGT 2 cut(s) 455, 665
AgsI TTSAA 1 cut(s) 1000
AhdI GACNNNNNGTC 1 cut(s) 622
AjiI CACGTC 1 cut(s) 619
AjnI CCWGG 4 cut(s) 197, 639, 972, 1173
AloI GAACNNNNNNTCC 2 cut(s) 854, 886
AluBI AGCT 7 cut(s) 358, 513, 607, 661, 961, 990, 1216
AluI AGCT 7 cut(s) 358, 513, 607, 661, 961, 990, 1216
Alw26I GTCTC 2 cut(s) 630, 803
AlwI GGATC 2 cut(s) 212, 964
AlwNI CAGNNNCTG 1 cut(s) 847
Ama87I CYCGRG 1 cut(s) 541
AoxI GGCC 7 cut(s) 6, 256, 286, 304, 406, 1197, 1223
ApeKI GCWGC 2 cut(s) 607, 847
AsiGI ACCGGT 2 cut(s) 455, 665
AspS9I GGNCC 6 cut(s) 386, 458, 668, 734, 806, 880
AsuC2I CCSGG 8 cut(s) 303, 313, 372, 529, 874, 1099, 1116, 1196
AvaI CYCGRG 1 cut(s) 541
AvaII GGWCC 6 cut(s) 386, 458, 668, 734, 806, 880
BaeGI GKGCMC 3 cut(s) 1061, 1173, 1196
BanI GGYRCC 3 cut(s) 176, 1058, 1168
BanII GRGCYC 1 cut(s) 923
BbvCI CCTCAGC 1 cut(s) 509
BbvI GCAGC 2 cut(s) 594, 834
BccI CCATC 5 cut(s) 149, 482, 746, 913, 1177
BceAI ACGGC 1 cut(s) 928
BciT130I CCWGG 4 cut(s) 199, 641, 974, 1175
BcnI CCSGG 8 cut(s) 303, 313, 372, 529, 874, 1099, 1116, 1196
BcoDI GTCTC 2 cut(s) 630, 803
BfaI CTAG 1 cut(s) 1258
BfuAI ACCTGC 1 cut(s) 254
BisI GCNGC 5 cut(s) 6, 210, 608, 611, 848
BlsI GCNGC 5 cut(s) 7, 211, 609, 612, 849
Bme18I GGWCC 6 cut(s) 386, 458, 668, 734, 806, 880
BmeRI GACNNNNNGTC 1 cut(s) 622
BmeT110I CYCGRG 1 cut(s) 541
BmgBI CACGTC 1 cut(s) 619
BmgT120I GGNCC 6 cut(s) 386, 458, 668, 734, 806, 880
BmsI GCATC 1 cut(s) 97
BpmI CTGGAG 1 cut(s) 824
Bpu10I CCTNAGC 1 cut(s) 509
BpuEI CTTGAG 1 cut(s) 1171
BpuMI CCSGG 8 cut(s) 303, 313, 372, 529, 874, 1099, 1116, 1196
BsaAI YACGTR 1 cut(s) 1054
BsaHI GRCGYC 2 cut(s) 240, 1229
BsaJI CCNNGG 8 cut(s) 172, 198, 370, 540, 888, 1028, 1115, 1173
BsaWI WCCGGW 2 cut(s) 455, 665
BsaXI ACNNNNNCTCC 6 cut(s) 581, 611, 854, 884, 977, 1007
Bsc4I CCNNNNNNNGG 8 cut(s) 173, 559, 640, 889, 911, 979, 1178, 1179
Bse118I RCCGGY 5 cut(s) 455, 519, 559, 665, 1225
Bse1I ACTGG 3 cut(s) 289, 841, 1200
BseBI CCWGG 4 cut(s) 199, 641, 974, 1175
BseDI CCNNGG 8 cut(s) 172, 198, 370, 540, 888, 1028, 1115, 1173
BseGI GGATG 4 cut(s) 360, 576, 905, 1188
BseLI CCNNNNNNNGG 8 cut(s) 173, 559, 640, 889, 911, 979, 1178, 1179
BseMII CTCAG 3 cut(s) 368, 523, 814
BseNI ACTGG 3 cut(s) 289, 841, 1200
BseRI GAGGAG 5 cut(s) 16, 44, 47, 50, 473
BseSI GKGCMC 3 cut(s) 1061, 1173, 1196
BseX3I CGGCCG 2 cut(s) 256, 406
BseXI GCAGC 2 cut(s) 594, 834
BseYI CCCAGC 1 cut(s) 897
BsgI GTGCAG 1 cut(s) 232
Bsh1285I CGRYCG 3 cut(s) 259, 409, 927
BshFI GGCC 7 cut(s) 8, 258, 288, 306, 408, 1199, 1225
BshNI GGYRCC 3 cut(s) 176, 1058, 1168
BshTI ACCGGT 2 cut(s) 455, 665
BsiEI CGRYCG 3 cut(s) 259, 409, 927
BsiHKCI CYCGRG 1 cut(s) 541
BslFI GGGAC 6 cut(s) 149, 215, 654, 720, 866, 880
BslI CCNNNNNNNGG 8 cut(s) 173, 559, 640, 889, 911, 979, 1178, 1179
BsmAI GTCTC 2 cut(s) 630, 803
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 6 cut(s) 149, 215, 654, 720, 866, 880
BsmI GAATGC 1 cut(s) 185
BsnI GGCC 7 cut(s) 8, 258, 288, 306, 408, 1199, 1225
BsoBI CYCGRG 1 cut(s) 541
Bsp1286I GDGCHC 4 cut(s) 923, 1061, 1173, 1196
Bsp143I GATC 5 cut(s) 121, 217, 781, 924, 969
BspACI CCGC 9 cut(s) 5, 138, 210, 448, 611, 677, 884, 977, 1205
BspANI GGCC 7 cut(s) 8, 258, 288, 306, 408, 1199, 1225
BspCNI CTCAG 3 cut(s) 367, 522, 813
BspMI ACCTGC 1 cut(s) 254
BspPI GGATC 2 cut(s) 212, 964
BspT107I GGYRCC 3 cut(s) 176, 1058, 1168
BsrFI RCCGGY 5 cut(s) 455, 519, 559, 665, 1225
BsrI ACTGG 3 cut(s) 289, 841, 1200
BssAI RCCGGY 5 cut(s) 455, 519, 559, 665, 1225
BssECI CCNNGG 8 cut(s) 172, 198, 370, 540, 888, 1028, 1115, 1173
BssMI GATC 5 cut(s) 121, 217, 781, 924, 969
BssNI GRCGYC 2 cut(s) 240, 1229
Bst2UI CCWGG 4 cut(s) 199, 641, 974, 1175
Bst4CI ACNGT 5 cut(s) 84, 118, 797, 1010, 1138
Bst6I CTCTTC 2 cut(s) 371, 755
BstACI GRCGYC 2 cut(s) 240, 1229
BstBAI YACGTR 1 cut(s) 1054
BstC8I GCNNGC 4 cut(s) 605, 762, 1192, 1227
BstDEI CTNAG 3 cut(s) 354, 509, 800
BstDSI CCRYGG 1 cut(s) 888
BstF5I GGATG 4 cut(s) 360, 576, 905, 1188
BstKTI GATC 5 cut(s) 124, 220, 784, 927, 972
BstMAI GTCTC 2 cut(s) 630, 803
BstMBI GATC 5 cut(s) 121, 217, 781, 924, 969
BstMCI CGRYCG 3 cut(s) 259, 409, 927
BstMWI GCNNNNNNNGC 7 cut(s) 137, 246, 255, 853, 1196, 1222, 1231
BstNI CCWGG 4 cut(s) 199, 641, 974, 1175
BstNSI RCATGY 1 cut(s) 20
BstSLI GKGCMC 3 cut(s) 1061, 1173, 1196
BstV1I GCAGC 2 cut(s) 594, 834
BstX2I RGATCY 1 cut(s) 217
BstYI RGATCY 1 cut(s) 217
BstZI CGGCCG 2 cut(s) 256, 406
BsuRI GGCC 7 cut(s) 8, 258, 288, 306, 408, 1199, 1225
BtgI CCRYGG 1 cut(s) 888
BtrI CACGTC 1 cut(s) 619
BtsCI GGATG 4 cut(s) 360, 576, 905, 1188
BtsI GCAGTG 1 cut(s) 1241
BtsIMutI CAGTG 4 cut(s) 282, 808, 1207, 1241
BveI ACCTGC 1 cut(s) 254
Cac8I GCNNGC 4 cut(s) 605, 762, 1192, 1227
CaiI CAGNNNCTG 1 cut(s) 847
Cfr10I RCCGGY 5 cut(s) 455, 519, 559, 665, 1225
Cfr13I GGNCC 6 cut(s) 386, 458, 668, 734, 806, 880
CpoI CGGWCCG 1 cut(s) 458
CseI GACGC 3 cut(s) 229, 703, 1218
Csp6I GTAC 4 cut(s) 831, 1025, 1036, 1051
CspAI ACCGGT 2 cut(s) 455, 665
CspI CGGWCCG 1 cut(s) 458
CviAII CATG 4 cut(s) 17, 790, 1106, 1165
CviQI GTAC 4 cut(s) 831, 1025, 1036, 1051
DdeI CTNAG 3 cut(s) 354, 509, 800
DpnI GATC 5 cut(s) 123, 219, 783, 926, 971
DpnII GATC 5 cut(s) 121, 217, 781, 924, 969
DraIII CACNNNGTG 1 cut(s) 619
DriI GACNNNNNGTC 1 cut(s) 622
EaeI YGGCCR 4 cut(s) 6, 256, 406, 1197
EagI CGGCCG 2 cut(s) 256, 406
Eam1104I CTCTTC 2 cut(s) 371, 755
Eam1105I GACNNNNNGTC 1 cut(s) 622
EarI CTCTTC 2 cut(s) 371, 755
EclXI CGGCCG 2 cut(s) 256, 406
Eco24I GRGCYC 1 cut(s) 923
Eco47I GGWCC 6 cut(s) 386, 458, 668, 734, 806, 880
Eco52I CGGCCG 2 cut(s) 256, 406
Eco88I CYCGRG 1 cut(s) 541
EcoO109I RGGNCCY 2 cut(s) 734, 880
EcoRII CCWGG 4 cut(s) 197, 639, 972, 1173
EcoT38I GRGCYC 1 cut(s) 923
Esp3I CGTCTC 1 cut(s) 803
FaeI CATG 4 cut(s) 20, 793, 1109, 1168
FaiI YATR 5 cut(s) 18, 791, 950, 1107, 1166
FaqI GGGAC 6 cut(s) 149, 215, 654, 720, 866, 880
FatI CATG 4 cut(s) 16, 789, 1105, 1164
FauI CCCGC 3 cut(s) 891, 970, 1198
Fnu4HI GCNGC 5 cut(s) 6, 210, 608, 611, 848
FokI GGATG 4 cut(s) 347, 563, 892, 1195
FriOI GRGCYC 1 cut(s) 923
Fsp4HI GCNGC 5 cut(s) 6, 210, 608, 611, 848
FspBI CTAG 1 cut(s) 1258
GluI GCNGC 5 cut(s) 6, 210, 608, 611, 848
GsaI CCCAGC 1 cut(s) 901
GsuI CTGGAG 1 cut(s) 824
HaeIII GGCC 7 cut(s) 8, 258, 288, 306, 408, 1199, 1225
HgaI GACGC 3 cut(s) 229, 703, 1218
Hin1I GRCGYC 2 cut(s) 240, 1229
Hin1II CATG 4 cut(s) 20, 793, 1109, 1168
HincII GTYRAC 2 cut(s) 351, 438
HindII GTYRAC 2 cut(s) 351, 438
HinfI GANTC 9 cut(s) 261, 296, 352, 375, 411, 426, 463, 755, 893
HpaI GTTAAC 1 cut(s) 438
Hpy166II GTNNAC 7 cut(s) 351, 438, 557, 775, 806, 1051, 1248
Hpy188I TCNGA 8 cut(s) 173, 295, 425, 462, 549, 567, 718, 1014
Hpy188III TCNNGA 2 cut(s) 145, 688
Hpy8I GTNNAC 7 cut(s) 351, 438, 557, 775, 806, 1051, 1248
Hpy99I CGWCG 6 cut(s) 88, 122, 620, 694, 697, 1234
HpyAV CCTTC 4 cut(s) 74, 178, 241, 644
HpyCH4III ACNGT 5 cut(s) 84, 118, 797, 1010, 1138
HpyCH4IV ACGT 4 cut(s) 618, 1023, 1038, 1053
HpyCH4V TGCA 4 cut(s) 20, 249, 856, 1164
HpyF10VI GCNNNNNNNGC 7 cut(s) 137, 246, 255, 853, 1196, 1222, 1231
HpyF3I CTNAG 3 cut(s) 354, 509, 800
HpySE526I ACGT 4 cut(s) 618, 1023, 1038, 1053
Hsp92I GRCGYC 2 cut(s) 240, 1229
Hsp92II CATG 4 cut(s) 20, 793, 1109, 1168
KflI GGGWCCC 2 cut(s) 734, 880
KroI GCCGGC 1 cut(s) 1225
KroNI GCCGGC 1 cut(s) 1227
KspAI GTTAAC 1 cut(s) 438
Kzo9I GATC 5 cut(s) 121, 217, 781, 924, 969
LmnI GCTCC 5 cut(s) 230, 324, 702, 749, 1213
Lsp1109I GCAGC 2 cut(s) 594, 834
LweI GCATC 1 cut(s) 97
MaeI CTAG 1 cut(s) 1258
MaeII ACGT 4 cut(s) 618, 1023, 1038, 1053
MaeIII GTNAC 5 cut(s) 241, 262, 379, 701, 1154
MalI GATC 5 cut(s) 123, 219, 783, 926, 971
MboI GATC 5 cut(s) 121, 217, 781, 924, 969
MboII GAAGA 5 cut(s) 38, 41, 181, 358, 742
MflI RGATCY 1 cut(s) 217
MhlI GDGCHC 4 cut(s) 923, 1061, 1173, 1196
MluCI AATT 1 cut(s) 1087
MlyI GAGTC 7 cut(s) 270, 290, 346, 405, 435, 749, 902
MmeI TCCRAC 4 cut(s) 318, 424, 513, 612
MroNI GCCGGC 1 cut(s) 1225
MseI TTAA 3 cut(s) 437, 647, 1041
Mva1269I GAATGC 1 cut(s) 185
MvaI CCWGG 4 cut(s) 199, 641, 974, 1175
MwoI GCNNNNNNNGC 7 cut(s) 137, 246, 255, 853, 1196, 1222, 1231
NaeI GCCGGC 1 cut(s) 1227
NciI CCSGG 8 cut(s) 303, 313, 372, 529, 874, 1099, 1116, 1196
NdeII GATC 5 cut(s) 121, 217, 781, 924, 969
NgoMIV GCCGGC 1 cut(s) 1225
NlaIII CATG 4 cut(s) 20, 793, 1109, 1168
NmeAIII GCCGAG 4 cut(s) 258, 284, 384, 765
NmuCI GTSAC 3 cut(s) 241, 262, 379
NspI RCATGY 1 cut(s) 20
PaqCI CACCTGC 1 cut(s) 254
PcsI WCGNNNNNNNCGW 3 cut(s) 1044, 1217, 1226
PctI GAATGC 1 cut(s) 185
PdiI GCCGGC 1 cut(s) 1227
PfeI GAWTC 2 cut(s) 375, 463
PinAI ACCGGT 2 cut(s) 455, 665
PkrI GCNGC 5 cut(s) 7, 211, 609, 612, 849
Ple19I CGATCG 1 cut(s) 927
PleI GAGTC 7 cut(s) 269, 290, 346, 405, 434, 749, 901
PpsI GAGTC 7 cut(s) 269, 290, 346, 405, 434, 749, 901
Ppu21I YACGTR 1 cut(s) 1054
PpuMI RGGWCCY 2 cut(s) 734, 880
Psp5II RGGWCCY 2 cut(s) 734, 880
Psp6I CCWGG 4 cut(s) 197, 639, 972, 1173
PspFI CCCAGC 1 cut(s) 897
PspGI CCWGG 4 cut(s) 197, 639, 972, 1173
PspPI GGNCC 6 cut(s) 386, 458, 668, 734, 806, 880
PspPPI RGGWCCY 2 cut(s) 734, 880
PstNI CAGNNNCTG 1 cut(s) 847
PsuI RGATCY 1 cut(s) 217
PvuI CGATCG 1 cut(s) 927
RsaI GTAC 4 cut(s) 832, 1026, 1037, 1052
RsaNI GTAC 4 cut(s) 831, 1025, 1036, 1051
Rsr2I CGGWCCG 1 cut(s) 458
RsrII CGGWCCG 1 cut(s) 458
SaqAI TTAA 3 cut(s) 437, 647, 1041
SatI GCNGC 5 cut(s) 6, 210, 608, 611, 848
Sau3AI GATC 5 cut(s) 121, 217, 781, 924, 969
Sau96I GGNCC 6 cut(s) 386, 458, 668, 734, 806, 880
SchI GAGTC 7 cut(s) 270, 290, 346, 405, 435, 749, 902
SduI GDGCHC 4 cut(s) 923, 1061, 1173, 1196
SfaNI GCATC 1 cut(s) 97
SinI GGWCC 6 cut(s) 386, 458, 668, 734, 806, 880
SmlI CTYRAG 1 cut(s) 1150
SmoI CTYRAG 1 cut(s) 1150
Sse9I AATT 1 cut(s) 1087
SsiI CCGC 9 cut(s) 5, 138, 210, 448, 611, 677, 884, 977, 1205
SspMI CTAG 1 cut(s) 1258
TaaI ACNGT 5 cut(s) 84, 118, 797, 1010, 1138
TaiI ACGT 4 cut(s) 621, 1026, 1041, 1056
TaqI TCGA 7 cut(s) 120, 504, 753, 780, 923, 1121, 1220
TasI AATT 1 cut(s) 1087
TauI GCSGC 3 cut(s) 8, 212, 613
TfiI GAWTC 2 cut(s) 375, 463
Tru1I TTAA 3 cut(s) 437, 647, 1041
Tru9I TTAA 3 cut(s) 437, 647, 1041
TscAI CASTG 4 cut(s) 289, 808, 1207, 1241
TseFI GTSAC 3 cut(s) 241, 262, 379
TseI GCWGC 2 cut(s) 607, 847
Tsp45I GTSAC 3 cut(s) 241, 262, 379
TspDTI ATGAA 1 cut(s) 806
TspGWI ACGGA 4 cut(s) 689, 818, 874, 1226
TspRI CASTG 4 cut(s) 289, 808, 1207, 1241
VpaK11BI GGWCC 6 cut(s) 386, 458, 668, 734, 806, 880
XceI RCATGY 1 cut(s) 20
XspI CTAG 1 cut(s) 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.