4-hydroxyphenylpyruvate
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06570 AT1G06570 |
| fragaria_vesca | FvH4_6g38670 |
| malus_domestica | MD17G1134800.v1.1 |
| prunus_persica | Prupe.3G177700_v2.0.a1 |
| pyrus_communis | pycom17g12890 |
| rosa_chinensis | RchiOBHm_Chr2g0152131 RchiOBHm_Chr2g0152141 |
| rosa_laevigata | RLG00000020611 RLG00000020612 |
| rosa_multiflora | Rmu_sc0003043.1_g000020 Rmu_sc0003043.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00095890 Rroxscaffold_2G00095900 |
| rosa_rugosa | Rorug02G0431300 |
| rosa_samantha | Rh2AG492100 Rh2BG504600 Rh2BG504700 Rh2CG478600 Rh2DG515900 |
| rosa_wichuraiana | Rw2G040450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 533, 704 |
| AatII | GACGTC | 1 cut(s) | 798 |
| AccB1I | GGYRCC | 1 cut(s) | 494 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 630, 949 |
| AccBSI | CCGCTC | 2 cut(s) | 279, 813 |
| AccII | CGCG | 4 cut(s) | 402, 435, 534, 545 |
| AccIII | TCCGGA | 2 cut(s) | 105, 616 |
| AclWI | GGATC | 2 cut(s) | 608, 729 |
| AcoI | YGGCCR | 1 cut(s) | 507 |
| AcsI | RAATTY | 1 cut(s) | 1057 |
| AcuI | CTGAAG | 1 cut(s) | 1142 |
| AcyI | GRCGYC | 5 cut(s) | 174, 429, 459, 495, 795 |
| AfaI | GTAC | 5 cut(s) | 314, 581, 743, 881, 914 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 133, 630, 881, 949 |
| AgeI | ACCGGT | 2 cut(s) | 126, 141 |
| AgsI | TTSAA | 4 cut(s) | 79, 1063, 1309, 1340 |
| AjiI | CACGTC | 1 cut(s) | 154 |
| AjnI | CCWGG | 3 cut(s) | 57, 200, 915 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 617, 649 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 104, 136 |
| AluBI | AGCT | 5 cut(s) | 227, 588, 1117, 1303, 1367 |
| AluI | AGCT | 5 cut(s) | 227, 588, 1117, 1303, 1367 |
| Alw21I | GWGCWC | 3 cut(s) | 170, 924, 1305 |
| Alw26I | GTCTC | 1 cut(s) | 469 |
| Alw44I | GTGCAC | 1 cut(s) | 166 |
| AlwI | GGATC | 2 cut(s) | 608, 729 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1367 |
| Aor13HI | TCCGGA | 2 cut(s) | 105, 616 |
| AoxI | GGCC | 7 cut(s) | 55, 345, 350, 421, 507, 933, 1187 |
| ApaLI | GTGCAC | 1 cut(s) | 166 |
| ApeKI | GCWGC | 6 cut(s) | 45, 856, 1002, 1005, 1364, 1367 |
| ApoI | RAATTY | 1 cut(s) | 1057 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 104, 136, 447, 479 |
| AsiGI | ACCGGT | 2 cut(s) | 126, 141 |
| AspLEI | GCGC | 5 cut(s) | 368, 404, 437, 497, 955 |
| AspS9I | GGNCC | 8 cut(s) | 55, 120, 136, 346, 351, 595, 619, 933 |
| AsuC2I | CCSGG | 4 cut(s) | 118, 344, 349, 642 |
| AsuHPI | GGTGA | 9 cut(s) | 9, 295, 466, 529, 745, 748, 775, 970, 1247 |
| AsuII | TTCGAA | 1 cut(s) | 648 |
| AvaII | GGWCC | 4 cut(s) | 120, 136, 595, 619 |
| BaeGI | GKGCMC | 1 cut(s) | 170 |
| BanI | GGYRCC | 1 cut(s) | 494 |
| BanII | GRGCYC | 1 cut(s) | 1305 |
| BauI | CACGAG | 1 cut(s) | 767 |
| BbsI | GAAGAC | 1 cut(s) | 462 |
| Bbv12I | GWGCWC | 3 cut(s) | 170, 924, 1305 |
| BbvCI | CCTCAGC | 1 cut(s) | 983 |
| BbvI | GCAGC | 5 cut(s) | 57, 843, 1014, 1017, 1354 |
| BccI | CCATC | 6 cut(s) | 380, 452, 524, 548, 844, 1322 |
| BceAI | ACGGC | 7 cut(s) | 51, 422, 436, 446, 508, 577, 689 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 991, 1025 |
| BciT130I | CCWGG | 3 cut(s) | 59, 202, 917 |
| BcnI | CCSGG | 4 cut(s) | 118, 344, 349, 642 |
| BcoDI | GTCTC | 1 cut(s) | 469 |
| BfoI | RGCGCY | 3 cut(s) | 369, 498, 956 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 344 |
| Bme1390I | CCNGG | 7 cut(s) | 59, 118, 202, 344, 349, 642, 917 |
| Bme18I | GGWCC | 4 cut(s) | 120, 136, 595, 619 |
| BmgBI | CACGTC | 1 cut(s) | 154 |
| BmgT120I | GGNCC | 8 cut(s) | 55, 120, 136, 346, 351, 595, 619, 933 |
| BmiI | GGNNCC | 7 cut(s) | 137, 146, 496, 621, 635, 934, 998 |
| BmrFI | CCNGG | 7 cut(s) | 59, 118, 202, 344, 349, 642, 917 |
| BmsI | GCATC | 3 cut(s) | 17, 981, 1259 |
| BpiI | GAAGAC | 1 cut(s) | 462 |
| BpmI | CTGGAG | 3 cut(s) | 346, 926, 938 |
| Bpu10I | CCTNAGC | 1 cut(s) | 983 |
| Bpu14I | TTCGAA | 1 cut(s) | 648 |
| BpuEI | CTTGAG | 1 cut(s) | 1217 |
| BpuMI | CCSGG | 4 cut(s) | 118, 344, 349, 642 |
| BsaHI | GRCGYC | 5 cut(s) | 174, 429, 459, 495, 795 |
| BsaJI | CCNNGG | 9 cut(s) | 51, 116, 201, 219, 418, 424, 490, 504, 640 |
| BsaWI | WCCGGW | 5 cut(s) | 105, 126, 141, 616, 758 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 380, 410, 449, 479 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 133, 630, 881, 949 |
| Bse118I | RCCGGY | 4 cut(s) | 126, 141, 245, 874 |
| BseAI | TCCGGA | 2 cut(s) | 105, 616 |
| BseBI | CCWGG | 3 cut(s) | 59, 202, 917 |
| BseDI | CCNNGG | 9 cut(s) | 51, 116, 201, 219, 418, 424, 490, 504, 640 |
| BseGI | GGATG | 6 cut(s) | 372, 444, 516, 1084, 1096, 1274 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 133, 630, 881, 949 |
| BseMII | CTCAG | 1 cut(s) | 974 |
| BseRI | GAGGAG | 4 cut(s) | 512, 860, 1127, 1334 |
| BseSI | GKGCMC | 1 cut(s) | 170 |
| BseX3I | CGGCCG | 1 cut(s) | 507 |
| BseXI | GCAGC | 5 cut(s) | 57, 843, 1014, 1017, 1354 |
| BseYI | CCCAGC | 3 cut(s) | 22, 353, 1117 |
| Bsh1236I | CGCG | 4 cut(s) | 402, 435, 534, 545 |
| Bsh1285I | CGRYCG | 2 cut(s) | 127, 510 |
| BshFI | GGCC | 7 cut(s) | 57, 347, 352, 423, 509, 935, 1189 |
| BshNI | GGYRCC | 1 cut(s) | 494 |
| BshTI | ACCGGT | 2 cut(s) | 126, 141 |
| BsiEI | CGRYCG | 2 cut(s) | 127, 510 |
| BsiHKAI | GWGCWC | 3 cut(s) | 170, 924, 1305 |
| BsiWI | CGTACG | 1 cut(s) | 741 |
| BslFI | GGGAC | 4 cut(s) | 219, 898, 1151, 1162 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 133, 630, 881, 949 |
| BsmAI | GTCTC | 1 cut(s) | 469 |
| BsmBI | CGTCTC | 1 cut(s) | 469 |
| BsmFI | GGGAC | 4 cut(s) | 219, 898, 1151, 1162 |
| BsnI | GGCC | 7 cut(s) | 57, 347, 352, 423, 509, 935, 1189 |
| Bsp119I | TTCGAA | 1 cut(s) | 648 |
| Bsp1286I | GDGCHC | 3 cut(s) | 170, 924, 1305 |
| Bsp13I | TCCGGA | 2 cut(s) | 105, 616 |
| Bsp143I | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| Bsp19I | CCATGG | 2 cut(s) | 51, 219 |
| BspANI | GGCC | 7 cut(s) | 57, 347, 352, 423, 509, 935, 1189 |
| BspCNI | CTCAG | 1 cut(s) | 975 |
| BspEI | TCCGGA | 2 cut(s) | 105, 616 |
| BspFNI | CGCG | 4 cut(s) | 402, 435, 534, 545 |
| BspLI | GGNNCC | 7 cut(s) | 137, 146, 496, 621, 635, 934, 998 |
| BspPI | GGATC | 2 cut(s) | 608, 729 |
| BspQI | GCTCTTC | 2 cut(s) | 890, 1310 |
| BspT104I | TTCGAA | 1 cut(s) | 648 |
| BspT107I | GGYRCC | 1 cut(s) | 494 |
| BsrBI | CCGCTC | 2 cut(s) | 279, 813 |
| BsrFI | RCCGGY | 4 cut(s) | 126, 141, 245, 874 |
| BssAI | RCCGGY | 4 cut(s) | 126, 141, 245, 874 |
| BssECI | CCNNGG | 9 cut(s) | 51, 116, 201, 219, 418, 424, 490, 504, 640 |
| BssMI | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| BssNI | GRCGYC | 5 cut(s) | 174, 429, 459, 495, 795 |
| BssSI | CACGAG | 1 cut(s) | 767 |
| BssT1I | CCWWGG | 2 cut(s) | 51, 219 |
| Bst2BI | CACGAG | 1 cut(s) | 767 |
| Bst2UI | CCWGG | 3 cut(s) | 59, 202, 917 |
| Bst4CI | ACNGT | 1 cut(s) | 660 |
| Bst6I | CTCTTC | 5 cut(s) | 305, 884, 890, 1061, 1310 |
| BstACI | GRCGYC | 5 cut(s) | 174, 429, 459, 495, 795 |
| BstBI | TTCGAA | 1 cut(s) | 648 |
| BstC8I | GCNNGC | 3 cut(s) | 215, 1229, 1362 |
| BstDEI | CTNAG | 3 cut(s) | 228, 983, 1170 |
| BstDSI | CCRYGG | 4 cut(s) | 51, 219, 418, 490 |
| BstF5I | GGATG | 6 cut(s) | 372, 444, 516, 1084, 1096, 1274 |
| BstFNI | CGCG | 4 cut(s) | 402, 435, 534, 545 |
| BstH2I | RGCGCY | 3 cut(s) | 369, 498, 956 |
| BstHHI | GCGC | 5 cut(s) | 368, 404, 437, 497, 955 |
| BstKTI | GATC | 4 cut(s) | 616, 724, 1144, 1209 |
| BstMAI | GTCTC | 1 cut(s) | 469 |
| BstMBI | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| BstMCI | CGRYCG | 2 cut(s) | 127, 510 |
| BstNI | CCWGG | 3 cut(s) | 59, 202, 917 |
| BstNSI | RCATGY | 2 cut(s) | 217, 1231 |
| BstSCI | CCNGG | 7 cut(s) | 57, 116, 200, 342, 347, 640, 915 |
| BstSLI | GKGCMC | 1 cut(s) | 170 |
| BstUI | CGCG | 4 cut(s) | 402, 435, 534, 545 |
| BstV1I | GCAGC | 5 cut(s) | 57, 843, 1014, 1017, 1354 |
| BstV2I | GAAGAC | 1 cut(s) | 462 |
| BstX2I | RGATCY | 2 cut(s) | 613, 721 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1265 |
| BstYI | RGATCY | 2 cut(s) | 613, 721 |
| BstZI | CGGCCG | 1 cut(s) | 507 |
| BsuRI | GGCC | 7 cut(s) | 57, 347, 352, 423, 509, 935, 1189 |
| BtgI | CCRYGG | 4 cut(s) | 51, 219, 418, 490 |
| BtgZI | GCGATG | 1 cut(s) | 526 |
| BtrI | CACGTC | 1 cut(s) | 154 |
| BtsCI | GGATG | 6 cut(s) | 372, 444, 516, 1084, 1096, 1274 |
| Cac8I | GCNNGC | 3 cut(s) | 215, 1229, 1362 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1367 |
| CfoI | GCGC | 5 cut(s) | 368, 404, 437, 497, 955 |
| Cfr10I | RCCGGY | 4 cut(s) | 126, 141, 245, 874 |
| Cfr13I | GGNCC | 8 cut(s) | 55, 120, 136, 346, 351, 595, 619, 933 |
| CpoI | CGGWCCG | 1 cut(s) | 120 |
| CseI | GACGC | 7 cut(s) | 182, 418, 467, 472, 523, 988, 997 |
| Csp6I | GTAC | 5 cut(s) | 313, 580, 742, 880, 913 |
| CspAI | ACCGGT | 2 cut(s) | 126, 141 |
| CspI | CGGWCCG | 1 cut(s) | 120 |
| CviAII | CATG | 6 cut(s) | 52, 214, 220, 260, 1195, 1228 |
| CviQI | GTAC | 5 cut(s) | 313, 580, 742, 880, 913 |
| DdeI | CTNAG | 3 cut(s) | 228, 983, 1170 |
| DinI | GGCGCC | 1 cut(s) | 496 |
| DpnI | GATC | 4 cut(s) | 615, 723, 1143, 1208 |
| DpnII | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 533, 704 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 533, 704 |
| EaeI | YGGCCR | 1 cut(s) | 507 |
| EagI | CGGCCG | 1 cut(s) | 507 |
| Eam1104I | CTCTTC | 5 cut(s) | 305, 884, 890, 1061, 1310 |
| EarI | CTCTTC | 5 cut(s) | 305, 884, 890, 1061, 1310 |
| EciI | GGCGGA | 3 cut(s) | 457, 677, 1029 |
| Ecl136II | GAGCTC | 1 cut(s) | 1303 |
| EclXI | CGGCCG | 1 cut(s) | 507 |
| Eco130I | CCWWGG | 2 cut(s) | 51, 219 |
| Eco24I | GRGCYC | 1 cut(s) | 1305 |
| Eco32I | GATATC | 1 cut(s) | 738 |
| Eco47I | GGWCC | 4 cut(s) | 120, 136, 595, 619 |
| Eco52I | CGGCCG | 1 cut(s) | 507 |
| Eco53kI | GAGCTC | 1 cut(s) | 1303 |
| Eco57I | CTGAAG | 1 cut(s) | 1142 |
| EcoICRI | GAGCTC | 1 cut(s) | 1303 |
| EcoRII | CCWGG | 3 cut(s) | 57, 200, 915 |
| EcoRV | GATATC | 1 cut(s) | 738 |
| EcoT14I | CCWWGG | 2 cut(s) | 51, 219 |
| EcoT38I | GRGCYC | 1 cut(s) | 1305 |
| EgeI | GGCGCC | 1 cut(s) | 496 |
| EheI | GGCGCC | 1 cut(s) | 496 |
| ErhI | CCWWGG | 2 cut(s) | 51, 219 |
| Esp3I | CGTCTC | 1 cut(s) | 469 |
| FaeI | CATG | 6 cut(s) | 55, 217, 223, 263, 1198, 1231 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1277, 1309 |
| FaqI | GGGAC | 4 cut(s) | 219, 898, 1151, 1162 |
| FatI | CATG | 6 cut(s) | 51, 213, 219, 259, 1194, 1227 |
| FauI | CCCGC | 1 cut(s) | 407 |
| FokI | GGATG | 6 cut(s) | 359, 431, 503, 1091, 1103, 1281 |
| FriOI | GRGCYC | 1 cut(s) | 1305 |
| GlaI | GCGC | 5 cut(s) | 367, 403, 436, 496, 954 |
| GsaI | CCCAGC | 3 cut(s) | 26, 357, 1121 |
| GsuI | CTGGAG | 3 cut(s) | 346, 926, 938 |
| HaeII | RGCGCY | 3 cut(s) | 369, 498, 956 |
| HaeIII | GGCC | 7 cut(s) | 57, 347, 352, 423, 509, 935, 1189 |
| HgaI | GACGC | 7 cut(s) | 182, 418, 467, 472, 523, 988, 997 |
| HhaI | GCGC | 5 cut(s) | 368, 404, 437, 497, 955 |
| Hin1I | GRCGYC | 5 cut(s) | 174, 429, 459, 495, 795 |
| Hin1II | CATG | 6 cut(s) | 55, 217, 223, 263, 1198, 1231 |
| Hin6I | GCGC | 5 cut(s) | 366, 402, 435, 495, 953 |
| HinP1I | GCGC | 5 cut(s) | 366, 402, 435, 495, 953 |
| HinfI | GANTC | 9 cut(s) | 195, 207, 645, 684, 762, 904, 939, 1150, 1218 |
| HphI | GGTGA | 9 cut(s) | 9, 295, 466, 529, 745, 748, 775, 970, 1247 |
| Hpy166II | GTNNAC | 5 cut(s) | 139, 168, 783, 880, 1255 |
| Hpy188III | TCNNGA | 4 cut(s) | 106, 617, 976, 1234 |
| Hpy8I | GTNNAC | 5 cut(s) | 139, 168, 783, 880, 1255 |
| HpyAV | CCTTC | 6 cut(s) | 281, 391, 415, 481, 1238, 1279 |
| HpyCH4III | ACNGT | 1 cut(s) | 660 |
| HpyCH4IV | ACGT | 8 cut(s) | 153, 567, 582, 714, 744, 795, 911, 1046 |
| HpyCH4V | TGCA | 3 cut(s) | 168, 1227, 1355 |
| HpyF3I | CTNAG | 3 cut(s) | 228, 983, 1170 |
| HpySE526I | ACGT | 8 cut(s) | 153, 567, 582, 714, 744, 795, 911, 1046 |
| Hsp92I | GRCGYC | 5 cut(s) | 174, 429, 459, 495, 795 |
| Hsp92II | CATG | 6 cut(s) | 55, 217, 223, 263, 1198, 1231 |
| HspAI | GCGC | 5 cut(s) | 366, 402, 435, 495, 953 |
| KasI | GGCGCC | 1 cut(s) | 494 |
| Kpn2I | TCCGGA | 2 cut(s) | 105, 616 |
| Kzo9I | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| LguI | GCTCTTC | 2 cut(s) | 890, 1310 |
| LmnI | GCTCC | 4 cut(s) | 284, 919, 996, 1114 |
| Lsp1109I | GCAGC | 5 cut(s) | 57, 843, 1014, 1017, 1354 |
| LweI | GCATC | 3 cut(s) | 17, 981, 1259 |
| MaeII | ACGT | 8 cut(s) | 153, 567, 582, 714, 744, 795, 911, 1046 |
| MaeIII | GTNAC | 2 cut(s) | 535, 1289 |
| MalI | GATC | 4 cut(s) | 615, 723, 1143, 1208 |
| MbiI | CCGCTC | 2 cut(s) | 279, 813 |
| MboI | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| MboII | GAAGA | 8 cut(s) | 292, 467, 901, 907, 1075, 1078, 1253, 1297 |
| MflI | RGATCY | 2 cut(s) | 613, 721 |
| MhlI | GDGCHC | 3 cut(s) | 170, 924, 1305 |
| MluCI | AATT | 2 cut(s) | 292, 1057 |
| Mly113I | GGCGCC | 1 cut(s) | 495 |
| MlyI | GAGTC | 4 cut(s) | 201, 933, 1144, 1227 |
| MmeI | TCCRAC | 6 cut(s) | 120, 147, 258, 577, 778, 1159 |
| MroI | TCCGGA | 2 cut(s) | 105, 616 |
| MseI | TTAA | 2 cut(s) | 818, 1101 |
| MslI | CAYNNNNRTG | 1 cut(s) | 218 |
| MspA1I | CMGCKG | 1 cut(s) | 1367 |
| MspR9I | CCNGG | 7 cut(s) | 59, 118, 202, 344, 349, 642, 917 |
| MvaI | CCWGG | 3 cut(s) | 59, 202, 917 |
| MvnI | CGCG | 4 cut(s) | 402, 435, 534, 545 |
| NarI | GGCGCC | 1 cut(s) | 495 |
| NciI | CCSGG | 4 cut(s) | 118, 344, 349, 642 |
| NcoI | CCATGG | 2 cut(s) | 51, 219 |
| NdeII | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| NlaIII | CATG | 6 cut(s) | 55, 217, 223, 263, 1198, 1231 |
| NlaIV | GGNNCC | 7 cut(s) | 137, 146, 496, 621, 635, 934, 998 |
| NmeAIII | GCCGAG | 4 cut(s) | 189, 405, 485, 802 |
| NmuCI | GTSAC | 1 cut(s) | 535 |
| NspI | RCATGY | 2 cut(s) | 217, 1231 |
| NspV | TTCGAA | 1 cut(s) | 648 |
| PaeI | GCATGC | 2 cut(s) | 217, 1231 |
| PciSI | GCTCTTC | 2 cut(s) | 890, 1310 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 426, 459, 531, 702, 737, 774, 804 |
| PfeI | GAWTC | 5 cut(s) | 195, 645, 684, 762, 904 |
| Pfl23II | CGTACG | 1 cut(s) | 741 |
| PflFI | GACNNNGTC | 2 cut(s) | 461, 794 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 630, 949 |
| PinAI | ACCGGT | 2 cut(s) | 126, 141 |
| PleI | GAGTC | 4 cut(s) | 201, 933, 1144, 1226 |
| PluTI | GGCGCC | 1 cut(s) | 498 |
| PpsI | GAGTC | 4 cut(s) | 201, 933, 1144, 1226 |
| Psp124BI | GAGCTC | 1 cut(s) | 1305 |
| Psp6I | CCWGG | 3 cut(s) | 57, 200, 915 |
| PspFI | CCCAGC | 3 cut(s) | 22, 353, 1117 |
| PspGI | CCWGG | 3 cut(s) | 57, 200, 915 |
| PspLI | CGTACG | 1 cut(s) | 741 |
| PspN4I | GGNNCC | 7 cut(s) | 137, 146, 496, 621, 635, 934, 998 |
| PspPI | GGNCC | 8 cut(s) | 55, 120, 136, 346, 351, 595, 619, 933 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1367 |
| PsuI | RGATCY | 2 cut(s) | 613, 721 |
| PsyI | GACNNNGTC | 2 cut(s) | 461, 794 |
| PvuII | CAGCTG | 1 cut(s) | 1367 |
| RsaI | GTAC | 5 cut(s) | 314, 581, 743, 881, 914 |
| RsaNI | GTAC | 5 cut(s) | 313, 580, 742, 880, 913 |
| RseI | CAYNNNNRTG | 1 cut(s) | 218 |
| Rsr2I | CGGWCCG | 1 cut(s) | 120 |
| RsrII | CGGWCCG | 1 cut(s) | 120 |
| SacI | GAGCTC | 1 cut(s) | 1305 |
| SapI | GCTCTTC | 2 cut(s) | 890, 1310 |
| SaqAI | TTAA | 2 cut(s) | 818, 1101 |
| Sau3AI | GATC | 4 cut(s) | 613, 721, 1141, 1206 |
| Sau96I | GGNCC | 8 cut(s) | 55, 120, 136, 346, 351, 595, 619, 933 |
| SchI | GAGTC | 4 cut(s) | 201, 933, 1144, 1227 |
| ScrFI | CCNGG | 7 cut(s) | 59, 118, 202, 344, 349, 642, 917 |
| SduI | GDGCHC | 3 cut(s) | 170, 924, 1305 |
| SfaNI | GCATC | 3 cut(s) | 17, 981, 1259 |
| SfoI | GGCGCC | 1 cut(s) | 496 |
| SfuI | TTCGAA | 1 cut(s) | 648 |
| SinI | GGWCC | 4 cut(s) | 120, 136, 595, 619 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 218 |
| SmlI | CTYRAG | 1 cut(s) | 1232 |
| SmoI | CTYRAG | 1 cut(s) | 1232 |
| SphI | GCATGC | 2 cut(s) | 217, 1231 |
| Sse9I | AATT | 2 cut(s) | 292, 1057 |
| SspDI | GGCGCC | 1 cut(s) | 494 |
| SstI | GAGCTC | 1 cut(s) | 1305 |
| StyD4I | CCNGG | 7 cut(s) | 57, 116, 200, 342, 347, 640, 915 |
| StyI | CCWWGG | 2 cut(s) | 51, 219 |
| TaaI | ACNGT | 1 cut(s) | 660 |
| TaiI | ACGT | 8 cut(s) | 156, 570, 585, 717, 747, 798, 914, 1049 |
| TaqI | TCGA | 8 cut(s) | 156, 384, 453, 525, 648, 675, 696, 1317 |
| TasI | AATT | 2 cut(s) | 292, 1057 |
| TauI | GCSGC | 6 cut(s) | 188, 512, 693, 1002, 1039, 1042 |
| TfiI | GAWTC | 5 cut(s) | 195, 645, 684, 762, 904 |
| Tru1I | TTAA | 2 cut(s) | 818, 1101 |
| Tru9I | TTAA | 2 cut(s) | 818, 1101 |
| TseFI | GTSAC | 1 cut(s) | 535 |
| TseI | GCWGC | 6 cut(s) | 45, 856, 1002, 1005, 1364, 1367 |
| Tsp45I | GTSAC | 1 cut(s) | 535 |
| TspDTI | ATGAA | 2 cut(s) | 881, 1189 |
| TspGWI | ACGGA | 2 cut(s) | 814, 1103 |
| Tth111I | GACNNNGTC | 2 cut(s) | 461, 794 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 630, 949 |
| VneI | GTGCAC | 1 cut(s) | 166 |
| VpaK11BI | GGWCC | 4 cut(s) | 120, 136, 595, 619 |
| XapI | RAATTY | 1 cut(s) | 1057 |
| XceI | RCATGY | 2 cut(s) | 217, 1231 |
| ZraI | GACGTC | 1 cut(s) | 796 |