4-hydroxyphenylpyruvate
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06570 AT1G06570 |
| fragaria_vesca | FvH4_6g38670 |
| malus_domestica | MD17G1134800.v1.1 |
| prunus_persica | Prupe.3G177700_v2.0.a1 |
| pyrus_communis | pycom17g12890 |
| rosa_chinensis | RchiOBHm_Chr2g0152131 RchiOBHm_Chr2g0152141 |
| rosa_laevigata | RLG00000020611 RLG00000020612 |
| rosa_multiflora | Rmu_sc0003043.1_g000020 Rmu_sc0003043.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00095890 Rroxscaffold_2G00095900 |
| rosa_rugosa | Rorug02G0431300 |
| rosa_samantha | Rh2AG492100 Rh2BG504600 Rh2BG504700 Rh2CG478600 Rh2DG515900 |
| rosa_wichuraiana | Rw2G040450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 3 cut(s) | 765, 818, 954 |
| AccB1I | GGYRCC | 1 cut(s) | 650 |
| AccBSI | CCGCTC | 3 cut(s) | 435, 969, 1161 |
| AccI | GTMKAC | 1 cut(s) | 1035 |
| AccII | CGCG | 4 cut(s) | 98, 179, 591, 690 |
| AclWI | GGATC | 4 cut(s) | 142, 491, 667, 885 |
| AcuI | CTGAAG | 1 cut(s) | 1298 |
| AcvI | CACGTG | 1 cut(s) | 64 |
| AcyI | GRCGYC | 6 cut(s) | 330, 585, 651, 762, 815, 951 |
| AfaI | GTAC | 4 cut(s) | 42, 470, 899, 1070 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 273, 289, 486, 555, 850, 1037, 1111 |
| AflII | CTTAAG | 1 cut(s) | 1388 |
| AflIII | ACRYGT | 3 cut(s) | 17, 63, 1236 |
| AgeI | ACCGGT | 2 cut(s) | 282, 297 |
| AgsI | TTSAA | 5 cut(s) | 235, 289, 1132, 1219, 1465 |
| AjiI | CACGTC | 3 cut(s) | 20, 310, 1237 |
| AjnI | CCWGG | 4 cut(s) | 213, 503, 1104, 1299 |
| AleI | CACNNNNGTG | 1 cut(s) | 62 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 773, 805 |
| AluBI | AGCT | 4 cut(s) | 106, 712, 744, 1459 |
| AluI | AGCT | 4 cut(s) | 106, 712, 744, 1459 |
| Alw21I | GWGCWC | 2 cut(s) | 326, 1461 |
| Alw26I | GTCTC | 2 cut(s) | 17, 769 |
| Alw44I | GTGCAC | 1 cut(s) | 322 |
| AlwI | GGATC | 4 cut(s) | 142, 491, 667, 885 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 138, 1105, 1523 |
| Ama87I | CYCGRG | 1 cut(s) | 555 |
| AoxI | GGCC | 6 cut(s) | 6, 211, 361, 506, 577, 1343 |
| ApaLI | GTGCAC | 1 cut(s) | 322 |
| ApeKI | GCWGC | 2 cut(s) | 201, 1523 |
| AsiGI | ACCGGT | 2 cut(s) | 282, 297 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 908 |
| AspLEI | GCGC | 4 cut(s) | 593, 653, 735, 1091 |
| AsuC2I | CCSGG | 7 cut(s) | 274, 487, 556, 557, 779, 798, 916 |
| AsuHPI | GGTGA | 8 cut(s) | 26, 100, 150, 451, 622, 685, 904, 1403 |
| AsuII | TTCGAA | 1 cut(s) | 804 |
| AvaI | CYCGRG | 1 cut(s) | 555 |
| AvaII | GGWCC | 7 cut(s) | 264, 276, 292, 489, 706, 781, 853 |
| BaeGI | GKGCMC | 2 cut(s) | 326, 1307 |
| BanI | GGYRCC | 1 cut(s) | 650 |
| BanII | GRGCYC | 2 cut(s) | 843, 1461 |
| BauI | CACGAG | 3 cut(s) | 239, 355, 923 |
| BbrPI | CACGTG | 1 cut(s) | 64 |
| BbsI | GAAGAC | 1 cut(s) | 1128 |
| Bbv12I | GWGCWC | 2 cut(s) | 326, 1461 |
| BbvCI | CCTCAGC | 1 cut(s) | 1139 |
| BbvI | GCAGC | 2 cut(s) | 213, 1510 |
| BccI | CCATC | 4 cut(s) | 536, 608, 1000, 1478 |
| BceAI | ACGGC | 8 cut(s) | 578, 592, 664, 733, 831, 845, 957, 1171 |
| BciT130I | CCWGG | 4 cut(s) | 215, 505, 1106, 1301 |
| BclI | TGATCA | 1 cut(s) | 1249 |
| BcnI | CCSGG | 7 cut(s) | 274, 487, 556, 557, 779, 798, 916 |
| BcoDI | GTCTC | 2 cut(s) | 17, 769 |
| BfaI | CTAG | 1 cut(s) | 756 |
| BfoI | RGCGCY | 2 cut(s) | 654, 1092 |
| BfrI | CTTAAG | 1 cut(s) | 1388 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1161 |
| BisI | GCNGC | 7 cut(s) | 96, 202, 1162, 1193, 1196, 1521, 1524 |
| BlsI | GCNGC | 7 cut(s) | 97, 203, 1163, 1194, 1197, 1522, 1525 |
| Bme18I | GGWCC | 7 cut(s) | 264, 276, 292, 489, 706, 781, 853 |
| BmeT110I | CYCGRG | 1 cut(s) | 555 |
| BmgBI | CACGTC | 3 cut(s) | 20, 310, 1237 |
| BmiI | GGNNCC | 7 cut(s) | 302, 362, 652, 791, 842, 1154, 1175 |
| BmsI | GCATC | 2 cut(s) | 213, 1173 |
| BpiI | GAAGAC | 1 cut(s) | 1128 |
| BpmI | CTGGAG | 1 cut(s) | 1113 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1139 |
| Bpu14I | TTCGAA | 1 cut(s) | 804 |
| BpuMI | CCSGG | 7 cut(s) | 274, 487, 556, 557, 779, 798, 916 |
| BsaAI | YACGTR | 3 cut(s) | 64, 739, 901 |
| BsaHI | GRCGYC | 6 cut(s) | 330, 585, 651, 762, 815, 951 |
| BsaWI | WCCGGW | 2 cut(s) | 282, 297 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 551, 581 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 273, 289, 486, 555, 850, 1037, 1111 |
| Bse118I | RCCGGY | 3 cut(s) | 282, 297, 1030 |
| Bse1I | ACTGG | 1 cut(s) | 9 |
| BseBI | CCWGG | 4 cut(s) | 215, 505, 1106, 1301 |
| BseGI | GGATG | 5 cut(s) | 528, 600, 1252, 1399, 1430 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 273, 289, 486, 555, 850, 1037, 1111 |
| BseMII | CTCAG | 1 cut(s) | 1130 |
| BseNI | ACTGG | 1 cut(s) | 9 |
| BseRI | GAGGAG | 5 cut(s) | 419, 556, 668, 1165, 1283 |
| BseSI | GKGCMC | 2 cut(s) | 326, 1307 |
| BseXI | GCAGC | 2 cut(s) | 213, 1510 |
| BseYI | CCCAGC | 1 cut(s) | 1229 |
| Bsh1236I | CGCG | 4 cut(s) | 98, 179, 591, 690 |
| Bsh1285I | CGRYCG | 2 cut(s) | 183, 283 |
| BshFI | GGCC | 6 cut(s) | 8, 213, 363, 508, 579, 1345 |
| BshNI | GGYRCC | 1 cut(s) | 650 |
| BshTI | ACCGGT | 2 cut(s) | 282, 297 |
| BsiEI | CGRYCG | 2 cut(s) | 183, 283 |
| BsiHKAI | GWGCWC | 2 cut(s) | 326, 1461 |
| BsiHKCI | CYCGRG | 1 cut(s) | 555 |
| BsiWI | CGTACG | 1 cut(s) | 897 |
| BslFI | GGGAC | 5 cut(s) | 572, 970, 1054, 1247, 1307 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 273, 289, 486, 555, 850, 1037, 1111 |
| BsmAI | GTCTC | 2 cut(s) | 17, 769 |
| BsmBI | CGTCTC | 1 cut(s) | 769 |
| BsmFI | GGGAC | 5 cut(s) | 572, 970, 1054, 1247, 1307 |
| BsnI | GGCC | 6 cut(s) | 8, 213, 363, 508, 579, 1345 |
| BsoBI | CYCGRG | 1 cut(s) | 555 |
| Bsp119I | TTCGAA | 1 cut(s) | 804 |
| Bsp1286I | GDGCHC | 4 cut(s) | 326, 843, 1307, 1461 |
| Bsp1407I | TGTACA | 1 cut(s) | 40 |
| Bsp143I | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| Bsp19I | CCATGG | 1 cut(s) | 375 |
| BspANI | GGCC | 6 cut(s) | 8, 213, 363, 508, 579, 1345 |
| BspCNI | CTCAG | 1 cut(s) | 1131 |
| BspFNI | CGCG | 4 cut(s) | 98, 179, 591, 690 |
| BspLI | GGNNCC | 7 cut(s) | 302, 362, 652, 791, 842, 1154, 1175 |
| BspPI | GGATC | 4 cut(s) | 142, 491, 667, 885 |
| BspQI | GCTCTTC | 1 cut(s) | 1466 |
| BspT104I | TTCGAA | 1 cut(s) | 804 |
| BspT107I | GGYRCC | 1 cut(s) | 650 |
| BspTI | CTTAAG | 1 cut(s) | 1388 |
| BsrBI | CCGCTC | 3 cut(s) | 435, 969, 1161 |
| BsrFI | RCCGGY | 3 cut(s) | 282, 297, 1030 |
| BsrGI | TGTACA | 1 cut(s) | 40 |
| BsrI | ACTGG | 1 cut(s) | 9 |
| BssAI | RCCGGY | 3 cut(s) | 282, 297, 1030 |
| BssMI | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| BssNAI | GTATAC | 1 cut(s) | 1036 |
| BssNI | GRCGYC | 6 cut(s) | 330, 585, 651, 762, 815, 951 |
| BssSI | CACGAG | 3 cut(s) | 239, 355, 923 |
| BssT1I | CCWWGG | 1 cut(s) | 375 |
| Bst1107I | GTATAC | 1 cut(s) | 1036 |
| Bst2BI | CACGAG | 3 cut(s) | 239, 355, 923 |
| Bst2UI | CCWGG | 4 cut(s) | 215, 505, 1106, 1301 |
| Bst4CI | ACNGT | 2 cut(s) | 130, 697 |
| Bst6I | CTCTTC | 6 cut(s) | 461, 996, 1040, 1046, 1217, 1466 |
| BstACI | GRCGYC | 6 cut(s) | 330, 585, 651, 762, 815, 951 |
| BstAFI | CTTAAG | 1 cut(s) | 1388 |
| BstAUI | TGTACA | 1 cut(s) | 40 |
| BstBAI | YACGTR | 3 cut(s) | 64, 739, 901 |
| BstBI | TTCGAA | 1 cut(s) | 804 |
| BstC8I | GCNNGC | 5 cut(s) | 199, 371, 971, 1385, 1518 |
| BstDEI | CTNAG | 1 cut(s) | 1139 |
| BstDSI | CCRYGG | 3 cut(s) | 375, 574, 646 |
| BstF5I | GGATG | 5 cut(s) | 528, 600, 1252, 1399, 1430 |
| BstFNI | CGCG | 4 cut(s) | 98, 179, 591, 690 |
| BstH2I | RGCGCY | 2 cut(s) | 654, 1092 |
| BstHHI | GCGC | 4 cut(s) | 593, 653, 735, 1091 |
| BstKTI | GATC | 7 cut(s) | 150, 499, 675, 880, 1252, 1257, 1365 |
| BstMAI | GTCTC | 2 cut(s) | 17, 769 |
| BstMBI | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| BstMCI | CGRYCG | 2 cut(s) | 183, 283 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 210, 623, 650, 741, 1161, 1192, 1517 |
| BstNI | CCWGG | 4 cut(s) | 215, 505, 1106, 1301 |
| BstNSI | RCATGY | 2 cut(s) | 373, 1387 |
| BstSLI | GKGCMC | 2 cut(s) | 326, 1307 |
| BstUI | CGCG | 4 cut(s) | 98, 179, 591, 690 |
| BstV1I | GCAGC | 2 cut(s) | 213, 1510 |
| BstV2I | GAAGAC | 1 cut(s) | 1128 |
| BstX2I | RGATCY | 1 cut(s) | 877 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1421 |
| BstYI | RGATCY | 1 cut(s) | 877 |
| BstZ17I | GTATAC | 1 cut(s) | 1036 |
| BsuRI | GGCC | 6 cut(s) | 8, 213, 363, 508, 579, 1345 |
| BtgI | CCRYGG | 3 cut(s) | 375, 574, 646 |
| BtgZI | GCGATG | 1 cut(s) | 735 |
| BtrI | CACGTC | 3 cut(s) | 20, 310, 1237 |
| BtsCI | GGATG | 5 cut(s) | 528, 600, 1252, 1399, 1430 |
| BtsI | GCAGTG | 1 cut(s) | 136 |
| BtsIMutI | CAGTG | 2 cut(s) | 126, 136 |
| Cac8I | GCNNGC | 5 cut(s) | 199, 371, 971, 1385, 1518 |
| CaiI | CAGNNNCTG | 3 cut(s) | 138, 1105, 1523 |
| CfoI | GCGC | 4 cut(s) | 593, 653, 735, 1091 |
| Cfr10I | RCCGGY | 3 cut(s) | 282, 297, 1030 |
| Cfr9I | CCCGGG | 1 cut(s) | 555 |
| CpoI | CGGWCCG | 2 cut(s) | 276, 489 |
| CseI | GACGC | 6 cut(s) | 338, 574, 623, 628, 679, 1144 |
| Csp6I | GTAC | 4 cut(s) | 41, 469, 898, 1069 |
| CspAI | ACCGGT | 2 cut(s) | 282, 297 |
| CspI | CGGWCCG | 2 cut(s) | 276, 489 |
| CviAII | CATG | 8 cut(s) | 92, 208, 370, 376, 416, 811, 1183, 1384 |
| CviQI | GTAC | 4 cut(s) | 41, 469, 898, 1069 |
| DdeI | CTNAG | 1 cut(s) | 1139 |
| DinI | GGCGCC | 1 cut(s) | 652 |
| DpnI | GATC | 7 cut(s) | 149, 498, 674, 879, 1251, 1256, 1364 |
| DpnII | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| Eam1104I | CTCTTC | 6 cut(s) | 461, 996, 1040, 1046, 1217, 1466 |
| EarI | CTCTTC | 6 cut(s) | 461, 996, 1040, 1046, 1217, 1466 |
| EciI | GGCGGA | 4 cut(s) | 331, 652, 833, 959 |
| Ecl136II | GAGCTC | 1 cut(s) | 1459 |
| Eco130I | CCWWGG | 1 cut(s) | 375 |
| Eco24I | GRGCYC | 2 cut(s) | 843, 1461 |
| Eco47I | GGWCC | 7 cut(s) | 264, 276, 292, 489, 706, 781, 853 |
| Eco53kI | GAGCTC | 1 cut(s) | 1459 |
| Eco57I | CTGAAG | 1 cut(s) | 1298 |
| Eco72I | CACGTG | 1 cut(s) | 64 |
| Eco88I | CYCGRG | 1 cut(s) | 555 |
| EcoICRI | GAGCTC | 1 cut(s) | 1459 |
| EcoO109I | RGGNCCY | 1 cut(s) | 361 |
| EcoRII | CCWGG | 4 cut(s) | 213, 503, 1104, 1299 |
| EcoT14I | CCWWGG | 1 cut(s) | 375 |
| EcoT38I | GRGCYC | 2 cut(s) | 843, 1461 |
| EgeI | GGCGCC | 1 cut(s) | 652 |
| EheI | GGCGCC | 1 cut(s) | 652 |
| ErhI | CCWWGG | 1 cut(s) | 375 |
| Esp3I | CGTCTC | 1 cut(s) | 769 |
| FaeI | CATG | 8 cut(s) | 95, 211, 373, 379, 419, 814, 1186, 1387 |
| FaqI | GGGAC | 5 cut(s) | 572, 970, 1054, 1247, 1307 |
| FatI | CATG | 8 cut(s) | 91, 207, 369, 375, 415, 810, 1182, 1383 |
| FauI | CCCGC | 3 cut(s) | 578, 675, 962 |
| FbaI | TGATCA | 1 cut(s) | 1249 |
| FblI | GTMKAC | 1 cut(s) | 1035 |
| Fnu4HI | GCNGC | 7 cut(s) | 96, 202, 1162, 1193, 1196, 1521, 1524 |
| FokI | GGATG | 5 cut(s) | 515, 587, 1259, 1406, 1437 |
| FriOI | GRGCYC | 2 cut(s) | 843, 1461 |
| Fsp4HI | GCNGC | 7 cut(s) | 96, 202, 1162, 1193, 1196, 1521, 1524 |
| FspBI | CTAG | 1 cut(s) | 756 |
| GlaI | GCGC | 4 cut(s) | 592, 652, 734, 1090 |
| GluI | GCNGC | 7 cut(s) | 96, 202, 1162, 1193, 1196, 1521, 1524 |
| GsaI | CCCAGC | 1 cut(s) | 1233 |
| GsuI | CTGGAG | 1 cut(s) | 1113 |
| HaeII | RGCGCY | 2 cut(s) | 654, 1092 |
| HaeIII | GGCC | 6 cut(s) | 8, 213, 363, 508, 579, 1345 |
| HgaI | GACGC | 6 cut(s) | 338, 574, 623, 628, 679, 1144 |
| HhaI | GCGC | 4 cut(s) | 593, 653, 735, 1091 |
| Hin1I | GRCGYC | 6 cut(s) | 330, 585, 651, 762, 815, 951 |
| Hin1II | CATG | 8 cut(s) | 95, 211, 373, 379, 419, 814, 1186, 1387 |
| Hin6I | GCGC | 4 cut(s) | 591, 651, 733, 1089 |
| HinP1I | GCGC | 4 cut(s) | 591, 651, 733, 1089 |
| HincII | GTYRAC | 1 cut(s) | 1242 |
| HindII | GTYRAC | 1 cut(s) | 1242 |
| HinfI | GANTC | 6 cut(s) | 351, 770, 801, 1054, 1060, 1489 |
| HphI | GGTGA | 8 cut(s) | 26, 100, 150, 451, 622, 685, 904, 1403 |
| Hpy166II | GTNNAC | 9 cut(s) | 126, 158, 295, 324, 939, 1036, 1242, 1288, 1411 |
| Hpy188III | TCNNGA | 7 cut(s) | 69, 830, 851, 923, 955, 1132, 1493 |
| Hpy8I | GTNNAC | 9 cut(s) | 126, 158, 295, 324, 939, 1036, 1242, 1288, 1411 |
| HpyAV | CCTTC | 7 cut(s) | 121, 547, 637, 1079, 1394, 1399, 1411 |
| HpyCH4III | ACNGT | 2 cut(s) | 130, 697 |
| HpyCH4V | TGCA | 3 cut(s) | 324, 1383, 1511 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 210, 623, 650, 741, 1161, 1192, 1517 |
| HpyF3I | CTNAG | 1 cut(s) | 1139 |
| Hsp92I | GRCGYC | 6 cut(s) | 330, 585, 651, 762, 815, 951 |
| Hsp92II | CATG | 8 cut(s) | 95, 211, 373, 379, 419, 814, 1186, 1387 |
| HspAI | GCGC | 4 cut(s) | 591, 651, 733, 1089 |
| KasI | GGCGCC | 1 cut(s) | 650 |
| Ksp22I | TGATCA | 1 cut(s) | 1249 |
| Kzo9I | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| LguI | GCTCTTC | 1 cut(s) | 1466 |
| LmnI | GCTCC | 4 cut(s) | 440, 846, 1152, 1158 |
| Lsp1109I | GCAGC | 2 cut(s) | 213, 1510 |
| LweI | GCATC | 2 cut(s) | 213, 1173 |
| MaeI | CTAG | 1 cut(s) | 756 |
| MaeIII | GTNAC | 4 cut(s) | 134, 691, 758, 1445 |
| MalI | GATC | 7 cut(s) | 149, 498, 674, 879, 1251, 1256, 1364 |
| MbiI | CCGCTC | 3 cut(s) | 435, 969, 1161 |
| MboI | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| MboII | GAAGA | 8 cut(s) | 448, 1013, 1057, 1063, 1133, 1231, 1234, 1453 |
| MfeI | CAATTG | 1 cut(s) | 230 |
| MflI | RGATCY | 1 cut(s) | 877 |
| MhlI | GDGCHC | 4 cut(s) | 326, 843, 1307, 1461 |
| MluCI | AATT | 3 cut(s) | 230, 1178, 1506 |
| Mly113I | GGCGCC | 1 cut(s) | 651 |
| MlyI | GAGTC | 3 cut(s) | 764, 1063, 1483 |
| MmeI | TCCRAC | 5 cut(s) | 276, 303, 524, 792, 1315 |
| MroXI | GAANNNNTTC | 1 cut(s) | 908 |
| MseI | TTAA | 1 cut(s) | 1389 |
| MslI | CAYNNNNRTG | 2 cut(s) | 62, 374 |
| MspA1I | CMGCKG | 1 cut(s) | 1520 |
| MspCI | CTTAAG | 1 cut(s) | 1388 |
| MunI | CAATTG | 1 cut(s) | 230 |
| MvaI | CCWGG | 4 cut(s) | 215, 505, 1106, 1301 |
| MvnI | CGCG | 4 cut(s) | 98, 179, 591, 690 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 210, 623, 650, 741, 1161, 1192, 1517 |
| NarI | GGCGCC | 1 cut(s) | 651 |
| NciI | CCSGG | 7 cut(s) | 274, 487, 556, 557, 779, 798, 916 |
| NcoI | CCATGG | 1 cut(s) | 375 |
| NdeII | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| NlaIII | CATG | 8 cut(s) | 95, 211, 373, 379, 419, 814, 1186, 1387 |
| NlaIV | GGNNCC | 7 cut(s) | 302, 362, 652, 791, 842, 1154, 1175 |
| NmeAIII | GCCGAG | 5 cut(s) | 345, 561, 660, 727, 958 |
| NmuCI | GTSAC | 3 cut(s) | 134, 691, 758 |
| NspI | RCATGY | 2 cut(s) | 373, 1387 |
| NspV | TTCGAA | 1 cut(s) | 804 |
| OliI | CACNNNNGTG | 1 cut(s) | 62 |
| PaeI | GCATGC | 2 cut(s) | 373, 1387 |
| PciSI | GCTCTTC | 1 cut(s) | 1466 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 582, 687, 893, 930, 960, 1196, 1479 |
| PdmI | GAANNNNTTC | 1 cut(s) | 908 |
| PfeI | GAWTC | 3 cut(s) | 351, 801, 1060 |
| Pfl23II | CGTACG | 1 cut(s) | 897 |
| PflFI | GACNNNGTC | 1 cut(s) | 817 |
| PinAI | ACCGGT | 2 cut(s) | 282, 297 |
| PkrI | GCNGC | 7 cut(s) | 97, 203, 1163, 1194, 1197, 1522, 1525 |
| PleI | GAGTC | 3 cut(s) | 764, 1062, 1483 |
| PluTI | GGCGCC | 1 cut(s) | 654 |
| PmaCI | CACGTG | 1 cut(s) | 64 |
| PmlI | CACGTG | 1 cut(s) | 64 |
| PpsI | GAGTC | 3 cut(s) | 764, 1062, 1483 |
| Ppu21I | YACGTR | 3 cut(s) | 64, 739, 901 |
| Psp124BI | GAGCTC | 1 cut(s) | 1461 |
| Psp6I | CCWGG | 4 cut(s) | 213, 503, 1104, 1299 |
| PspCI | CACGTG | 1 cut(s) | 64 |
| PspFI | CCCAGC | 1 cut(s) | 1229 |
| PspGI | CCWGG | 4 cut(s) | 213, 503, 1104, 1299 |
| PspLI | CGTACG | 1 cut(s) | 897 |
| PspN4I | GGNNCC | 7 cut(s) | 302, 362, 652, 791, 842, 1154, 1175 |
| PstNI | CAGNNNCTG | 3 cut(s) | 138, 1105, 1523 |
| PsuI | RGATCY | 1 cut(s) | 877 |
| PsyI | GACNNNGTC | 1 cut(s) | 817 |
| RsaI | GTAC | 4 cut(s) | 42, 470, 899, 1070 |
| RsaNI | GTAC | 4 cut(s) | 41, 469, 898, 1069 |
| RseI | CAYNNNNRTG | 2 cut(s) | 62, 374 |
| Rsr2I | CGGWCCG | 2 cut(s) | 276, 489 |
| RsrII | CGGWCCG | 2 cut(s) | 276, 489 |
| SacI | GAGCTC | 1 cut(s) | 1461 |
| SapI | GCTCTTC | 1 cut(s) | 1466 |
| SaqAI | TTAA | 1 cut(s) | 1389 |
| SatI | GCNGC | 7 cut(s) | 96, 202, 1162, 1193, 1196, 1521, 1524 |
| Sau3AI | GATC | 7 cut(s) | 147, 496, 672, 877, 1249, 1254, 1362 |
| SchI | GAGTC | 3 cut(s) | 764, 1063, 1483 |
| SduI | GDGCHC | 4 cut(s) | 326, 843, 1307, 1461 |
| SfaNI | GCATC | 2 cut(s) | 213, 1173 |
| SfoI | GGCGCC | 1 cut(s) | 652 |
| SfuI | TTCGAA | 1 cut(s) | 804 |
| SinI | GGWCC | 7 cut(s) | 264, 276, 292, 489, 706, 781, 853 |
| SmaI | CCCGGG | 1 cut(s) | 557 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 62, 374 |
| SmlI | CTYRAG | 1 cut(s) | 1388 |
| SmoI | CTYRAG | 1 cut(s) | 1388 |
| SphI | GCATGC | 2 cut(s) | 373, 1387 |
| Sse9I | AATT | 3 cut(s) | 230, 1178, 1506 |
| SspDI | GGCGCC | 1 cut(s) | 650 |
| SspMI | CTAG | 1 cut(s) | 756 |
| SstI | GAGCTC | 1 cut(s) | 1461 |
| StyI | CCWWGG | 1 cut(s) | 375 |
| TaaI | ACNGT | 2 cut(s) | 130, 697 |
| TaqI | TCGA | 8 cut(s) | 312, 540, 609, 773, 804, 831, 1473, 1494 |
| TaqII | GACCGA | 2 cut(s) | 252, 506 |
| TasI | AATT | 3 cut(s) | 230, 1178, 1506 |
| TatI | WGTACW | 1 cut(s) | 40 |
| TauI | GCSGC | 5 cut(s) | 98, 1164, 1195, 1198, 1523 |
| TfiI | GAWTC | 3 cut(s) | 351, 801, 1060 |
| Tru1I | TTAA | 1 cut(s) | 1389 |
| Tru9I | TTAA | 1 cut(s) | 1389 |
| TscAI | CASTG | 2 cut(s) | 133, 143 |
| TseFI | GTSAC | 3 cut(s) | 134, 691, 758 |
| TseI | GCWGC | 2 cut(s) | 201, 1523 |
| Tsp45I | GTSAC | 3 cut(s) | 134, 691, 758 |
| TspDTI | ATGAA | 3 cut(s) | 17, 1037, 1171 |
| TspGWI | ACGGA | 2 cut(s) | 970, 1259 |
| TspMI | CCCGGG | 1 cut(s) | 555 |
| TspRI | CASTG | 2 cut(s) | 133, 143 |
| Tth111I | GACNNNGTC | 1 cut(s) | 817 |
| Vha464I | CTTAAG | 1 cut(s) | 1388 |
| VneI | GTGCAC | 1 cut(s) | 322 |
| VpaK11BI | GGWCC | 7 cut(s) | 264, 276, 292, 489, 706, 781, 853 |
| XceI | RCATGY | 2 cut(s) | 373, 1387 |
| XmaI | CCCGGG | 1 cut(s) | 555 |
| XmiI | GTMKAC | 1 cut(s) | 1035 |
| XmnI | GAANNNNTTC | 1 cut(s) | 908 |
| XspI | CTAG | 1 cut(s) | 756 |
| ZraI | GACGTC | 3 cut(s) | 763, 816, 952 |