Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0010018

Physical Location & Seq

Genomic Coordinates Forward (+)

17233595 .. 17235702

Gene Structure 2108 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00095900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGAGTTGCAGTTGCGTGACTTAGAACCCCTCCTAATCACCACCCACACCCGGCACCCGGCGCTCAAGGGTATAAGCCGGTATGGAGTTGCGTCACTGAAAACCCCTCCTCACCACCACCCATACCCGGCCACGTGGACTTTCCCTCCAAGTCCACTTTCAGTCTCCACATCACTATATCCTCACGGACCTCACCACACCCATCATCAGCACACCATCACAATGGGCCTCGCCGAAACCCAGAACAAGTCCAACCTCGTCGGATTCTCCAACTTCGTCCGGTCCAACCCCCGCTCCGATCGCTTCAAGGTCAACCGCTTCCACCACATCGAGTACTGGTGCACCGATGCCACCAACGCCGCCCTCCGCTTCTCCTGGGGCCTCGGCATGCCCATGGTAGCTAAGTCTGACCTCTCCACAGGGAACCAATCCCACGCCTCCTATCTCCTCCGCTCCGGCGACCTCTCCTTCCTCTTCACCGCCCCTTACTCCCCCACCCTCTCCGACCCGACCCGCCCCGCCTCCACCGCCTCCATCCCCACCTTCGATCACTCCGCCTCACGCGCCTTCTCCGCCAAACACGGCCTCGGCGTCCGCGCCATCGCTATCGAGGTTTCCGACGCCGACCTCGCTTTCCACGCCAGCGTCTCCCACGGCGCTAAACCCGCGTCCCAACCGATTCTCCTCAACAACCGCGTCACAATCGCCGAGGTCCAACTCTACGGCGACGTCGTTTTGCGGTACGTAAGCTACAAAGACCCGGCCCAGCTCTCCGACCCGAACCCGGACTTGTGGTTCCTCCCCGGGTTCGAGCCAGTCCCCACCTCCTTCCCCCTCGACTTCGGCCTCCGCCGCCTCGACCACGCCGTCGGCAACGTCCCCGACCTGTCCGCCGCCGTGGCCTACGTGAAAGGCTTCACCGGGTTCCACGAGTTCGCGGAGTTCACGGCGGAGGACGTCGGGACGAGCGAGAGCGGACTGAACTCCGTCGTTCTGGCGAACAACGACGAGACGGTGCTGCTTCCGATGAACGAGCCGGTGTACGGGACGAAGAGGAAGAGCCAGATTCAGACGTACCTGGAGCACAACGAAGGCGCCGGAGTCCAGCACCTGGCTCTGGTCAGCGGAGACATATTCAGGACCTTGAGGGAGATGAGGAAGCGGAGCGGAGTCGGAGGATTTGACTTCATGCCGGCGCCGCCGCCGACGTATTACCGGAATTTGAAGAAGAGGGCCGGCGATGTGTTGACGGATGAGCAGATCAAGGAGTGTGAGGAGTTGGGGATTTTGGTTGATAGGGATGACCAGGGTACTCTGCTTCAGATTTTCACTAAGCCTGTGGGAGATAGGCCGACGATATTCATAGAGATCATACAGAGAGTTGGGTGCATGCTTAAGAATGATAGAGGGGAGGTTTACCAGAAGGGTGGATGTGGTGGGTTCGGCAAGGGTAACTTTTCGGAGCTCTTCAAGTCCATTGAAGAATACGAGAAGACACTCGAAGCCAGGCAAATTGCAGAGCCGGCAGCTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009987 GO:0016054 GO:0019439 GO:0019752 GO:0042802 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0046395 GO:0071704 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00130 ko00350 ko00360 ko01100 map00130 map00350 map00360 map01100

Pfam Domains

Protein Families

Glyoxalase

Protein Analysis

511

Amino Acids

56.39

Weight (kDa)

6.42

Isoelectric Point (pI)

38.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06570 AT1G06570
fragaria_vesca	FvH4_6g38670
malus_domestica	MD17G1134800.v1.1
prunus_persica	Prupe.3G177700_v2.0.a1
pyrus_communis	pycom17g12890
rosa_chinensis	RchiOBHm_Chr2g0152131 RchiOBHm_Chr2g0152141
rosa_laevigata	RLG00000020611 RLG00000020612
rosa_multiflora	Rmu_sc0003043.1_g000020 Rmu_sc0003043.1_g000022
rosa_roxburghii	Rroxscaffold_2G00095890 Rroxscaffold_2G00095900
rosa_rugosa	Rorug02G0431300
rosa_samantha	Rh2AG492100 Rh2BG504600 Rh2BG504700 Rh2CG478600 Rh2DG515900
rosa_wichuraiana	Rw2G040450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	866
AatII	GACGTC	2 cut(s)	732, 960
AccB1I	GGYRCC	3 cut(s)	54, 1094, 1195
AccB7I	CCANNNNNTGG	1 cut(s)	1111
AccBSI	CCGCTC	4 cut(s)	294, 453, 975, 1167
AccII	CGCG	5 cut(s)	564, 597, 668, 696, 938
AcoI	YGGCCR	1 cut(s)	129
AcsI	RAATTY	1 cut(s)	1219
AcuI	CTGAAG	1 cut(s)	1304
AcvI	CACGTG	1 cut(s)	135
AcyI	GRCGYC	6 cut(s)	591, 621, 729, 957, 1095, 1196
AfaI	GTAC	5 cut(s)	335, 743, 1043, 1076, 1312
AfiI	CCNNNNNNNGG	7 cut(s)	51, 58, 127, 784, 1043, 1111, 1117
AflII	CTTAAG	1 cut(s)	1394
AgsI	TTSAA	4 cut(s)	307, 1225, 1471, 1481
AjnI	CCWGG	5 cut(s)	374, 1077, 1110, 1305, 1505
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
AloI	GAACNNNNNNTCC	2 cut(s)	779, 811
AluBI	AGCT	5 cut(s)	401, 750, 769, 1465, 1529
AluI	AGCT	5 cut(s)	401, 750, 769, 1465, 1529
Alw21I	GWGCWC	3 cut(s)	344, 1086, 1467
Alw26I	GTCTC	4 cut(s)	169, 652, 1004, 1122
Alw44I	GTGCAC	1 cut(s)	340
AlwNI	CAGNNNCTG	1 cut(s)	1111
Ama87I	CYCGRG	1 cut(s)	803
AoxI	GGCC	9 cut(s)	129, 226, 379, 583, 762, 844, 900, 1233, 1349
ApaLI	GTGCAC	1 cut(s)	340
ApeKI	GCWGC	3 cut(s)	1018, 1526, 1529
ApoI	RAATTY	1 cut(s)	1219
Asp700I	GAANNNNTTC	1 cut(s)	914
AspLEI	GCGC	6 cut(s)	64, 566, 599, 659, 1097, 1198
AspS9I	GGNCC	8 cut(s)	188, 226, 282, 379, 712, 763, 1140, 1233
AsuC2I	CCSGG	8 cut(s)	52, 59, 128, 761, 785, 804, 805, 922
AsuHPI	GGTGA	5 cut(s)	31, 104, 185, 469, 910
AvaI	CYCGRG	1 cut(s)	803
AvaII	GGWCC	4 cut(s)	188, 282, 712, 1140
BaeGI	GKGCMC	1 cut(s)	344
BanI	GGYRCC	3 cut(s)	54, 1094, 1195
BanII	GRGCYC	1 cut(s)	1467
BauI	CACGAG	1 cut(s)	929
BbrPI	CACGTG	1 cut(s)	135
BbsI	GAAGAC	1 cut(s)	1499
Bbv12I	GWGCWC	3 cut(s)	344, 1086, 1467
BbvI	GCAGC	2 cut(s)	1005, 1516
BccI	CCATC	4 cut(s)	210, 224, 542, 608
BceAI	ACGGC	6 cut(s)	598, 670, 739, 851, 881, 963
BciT130I	CCWGG	5 cut(s)	376, 1079, 1112, 1307, 1507
BcnI	CCSGG	8 cut(s)	52, 59, 128, 761, 785, 804, 805, 922
BcoDI	GTCTC	4 cut(s)	169, 652, 1004, 1122
BfoI	RGCGCY	4 cut(s)	65, 660, 1098, 1199
BfrI	CTTAAG	1 cut(s)	1394
BglI	GCCNNNNNGGC	1 cut(s)	899
BisI	GCNGC	8 cut(s)	360, 853, 894, 1019, 1199, 1202, 1527, 1530
BlsI	GCNGC	8 cut(s)	361, 854, 895, 1020, 1200, 1203, 1528, 1531
BmcAI	AGTACT	1 cut(s)	335
Bme18I	GGWCC	4 cut(s)	188, 282, 712, 1140
BmeT110I	CYCGRG	1 cut(s)	803
BmgT120I	GGNCC	8 cut(s)	188, 226, 282, 379, 712, 763, 1140, 1233
BmiI	GGNNCC	7 cut(s)	56, 380, 425, 797, 926, 1096, 1197
BmsI	GCATC	1 cut(s)	337
BpiI	GAAGAC	1 cut(s)	1499
BpmI	CTGGAG	1 cut(s)	1100
BpuEI	CTTGAG	2 cut(s)	50, 1165
BpuMI	CCSGG	8 cut(s)	52, 59, 128, 761, 785, 804, 805, 922
BsaAI	YACGTR	3 cut(s)	135, 745, 907
BsaHI	GRCGYC	6 cut(s)	591, 621, 729, 957, 1095, 1196
BsaWI	WCCGGW	2 cut(s)	279, 1215
BsaXI	ACNNNNNCTCC	7 cut(s)	26, 130, 160, 278, 308, 666, 696
Bsc4I	CCNNNNNNNGG	7 cut(s)	51, 58, 127, 784, 1043, 1111, 1117
Bse118I	RCCGGY	5 cut(s)	78, 1036, 1192, 1235, 1522
Bse1I	ACTGG	2 cut(s)	341, 815
BseBI	CCWGG	5 cut(s)	376, 1079, 1112, 1307, 1507
BseGI	GGATG	4 cut(s)	534, 1258, 1306, 1436
BseLI	CCNNNNNNNGG	7 cut(s)	51, 58, 127, 784, 1043, 1111, 1117
BseNI	ACTGG	2 cut(s)	341, 815
BseRI	GAGGAG	4 cut(s)	99, 437, 674, 1289
BseSI	GKGCMC	1 cut(s)	344
BseXI	GCAGC	2 cut(s)	1005, 1516
BseYI	CCCAGC	1 cut(s)	765
Bsh1236I	CGCG	5 cut(s)	564, 597, 668, 696, 938
Bsh1285I	CGRYCG	1 cut(s)	301
BshFI	GGCC	9 cut(s)	131, 228, 381, 585, 764, 846, 902, 1235, 1351
BshNI	GGYRCC	3 cut(s)	54, 1094, 1195
BsiEI	CGRYCG	1 cut(s)	301
BsiHKAI	GWGCWC	3 cut(s)	344, 1086, 1467
BsiHKCI	CYCGRG	1 cut(s)	803
BslFI	GGGAC	5 cut(s)	655, 803, 863, 976, 1060
BslI	CCNNNNNNNGG	7 cut(s)	51, 58, 127, 784, 1043, 1111, 1117
BsmAI	GTCTC	4 cut(s)	169, 652, 1004, 1122
BsmBI	CGTCTC	2 cut(s)	652, 1004
BsmFI	GGGAC	5 cut(s)	655, 803, 863, 976, 1060
BsnI	GGCC	9 cut(s)	131, 228, 381, 585, 764, 846, 902, 1235, 1351
BsoBI	CYCGRG	1 cut(s)	803
Bsp1286I	GDGCHC	3 cut(s)	344, 1086, 1467
Bsp143I	GATC	4 cut(s)	298, 547, 1260, 1368
Bsp19I	CCATGG	1 cut(s)	393
BspANI	GGCC	9 cut(s)	131, 228, 381, 585, 764, 846, 902, 1235, 1351
BspFNI	CGCG	5 cut(s)	564, 597, 668, 696, 938
BspLI	GGNNCC	7 cut(s)	56, 380, 425, 797, 926, 1096, 1197
BspQI	GCTCTTC	2 cut(s)	1052, 1472
BspT107I	GGYRCC	3 cut(s)	54, 1094, 1195
BspTI	CTTAAG	1 cut(s)	1394
BsrBI	CCGCTC	4 cut(s)	294, 453, 975, 1167
BsrFI	RCCGGY	5 cut(s)	78, 1036, 1192, 1235, 1522
BsrI	ACTGG	2 cut(s)	341, 815
BssAI	RCCGGY	5 cut(s)	78, 1036, 1192, 1235, 1522
BssMI	GATC	4 cut(s)	298, 547, 1260, 1368
BssNI	GRCGYC	6 cut(s)	591, 621, 729, 957, 1095, 1196
BssSI	CACGAG	1 cut(s)	929
BssT1I	CCWWGG	1 cut(s)	393
Bst2BI	CACGAG	1 cut(s)	929
Bst2UI	CCWGG	5 cut(s)	376, 1079, 1112, 1307, 1507
Bst4CI	ACNGT	1 cut(s)	1015
Bst6I	CTCTTC	5 cut(s)	479, 1046, 1052, 1223, 1472
BstACI	GRCGYC	6 cut(s)	591, 621, 729, 957, 1095, 1196
BstAFI	CTTAAG	1 cut(s)	1394
BstBAI	YACGTR	3 cut(s)	135, 745, 907
BstC8I	GCNNGC	6 cut(s)	389, 643, 1194, 1237, 1391, 1524
BstDEI	CTNAG	3 cut(s)	22, 402, 1332
BstDSI	CCRYGG	3 cut(s)	393, 652, 897
BstF5I	GGATG	4 cut(s)	534, 1258, 1306, 1436
BstFNI	CGCG	5 cut(s)	564, 597, 668, 696, 938
BstH2I	RGCGCY	4 cut(s)	65, 660, 1098, 1199
BstHHI	GCGC	6 cut(s)	64, 566, 599, 659, 1097, 1198
BstKTI	GATC	4 cut(s)	301, 550, 1263, 1371
BstMAI	GTCTC	4 cut(s)	169, 652, 1004, 1122
BstMBI	GATC	4 cut(s)	298, 547, 1260, 1368
BstMCI	CGRYCG	1 cut(s)	301
BstNI	CCWGG	5 cut(s)	376, 1079, 1112, 1307, 1507
BstNSI	RCATGY	2 cut(s)	391, 1393
BstSLI	GKGCMC	1 cut(s)	344
BstSNI	TACGTA	1 cut(s)	745
BstUI	CGCG	5 cut(s)	564, 597, 668, 696, 938
BstV1I	GCAGC	2 cut(s)	1005, 1516
BstV2I	GAAGAC	1 cut(s)	1499
BstXI	CCANNNNNNTGG	2 cut(s)	223, 1427
BsuRI	GGCC	9 cut(s)	131, 228, 381, 585, 764, 846, 902, 1235, 1351
BtgI	CCRYGG	3 cut(s)	393, 652, 897
BtgZI	GCGATG	2 cut(s)	586, 1254
BtsCI	GGATG	4 cut(s)	534, 1258, 1306, 1436
BtsIMutI	CAGTG	1 cut(s)	95
Cac8I	GCNNGC	6 cut(s)	389, 643, 1194, 1237, 1391, 1524
CaiI	CAGNNNCTG	1 cut(s)	1111
CfoI	GCGC	6 cut(s)	64, 566, 599, 659, 1097, 1198
Cfr10I	RCCGGY	5 cut(s)	78, 1036, 1192, 1235, 1522
Cfr13I	GGNCC	8 cut(s)	188, 226, 282, 379, 712, 763, 1140, 1233
Cfr9I	CCCGGG	1 cut(s)	803
CseI	GACGC	6 cut(s)	81, 580, 629, 634, 657, 685
Csp6I	GTAC	5 cut(s)	334, 742, 1042, 1075, 1311
CviAII	CATG	4 cut(s)	388, 394, 1189, 1390
CviQI	GTAC	5 cut(s)	334, 742, 1042, 1075, 1311
DdeI	CTNAG	3 cut(s)	22, 402, 1332
DinI	GGCGCC	2 cut(s)	1096, 1197
DpnI	GATC	4 cut(s)	300, 549, 1262, 1370
DpnII	GATC	4 cut(s)	298, 547, 1260, 1368
DrdI	GACNNNNNNGTC	1 cut(s)	866
DseDI	GACNNNNNNGTC	1 cut(s)	866
EaeI	YGGCCR	1 cut(s)	129
Eam1104I	CTCTTC	5 cut(s)	479, 1046, 1052, 1223, 1472
EarI	CTCTTC	5 cut(s)	479, 1046, 1052, 1223, 1472
EciI	GGCGGA	5 cut(s)	544, 562, 839, 880, 965
Ecl136II	GAGCTC	1 cut(s)	1465
Eco105I	TACGTA	1 cut(s)	745
Eco130I	CCWWGG	1 cut(s)	393
Eco24I	GRGCYC	1 cut(s)	1467
Eco47I	GGWCC	4 cut(s)	188, 282, 712, 1140
Eco53kI	GAGCTC	1 cut(s)	1465
Eco57I	CTGAAG	1 cut(s)	1304
Eco72I	CACGTG	1 cut(s)	135
Eco88I	CYCGRG	1 cut(s)	803
EcoICRI	GAGCTC	1 cut(s)	1465
EcoO109I	RGGNCCY	2 cut(s)	379, 1140
EcoRII	CCWGG	5 cut(s)	374, 1077, 1110, 1305, 1505
EcoT14I	CCWWGG	1 cut(s)	393
EcoT38I	GRGCYC	1 cut(s)	1467
EgeI	GGCGCC	2 cut(s)	1096, 1197
EheI	GGCGCC	2 cut(s)	1096, 1197
ErhI	CCWWGG	1 cut(s)	393
Esp3I	CGTCTC	2 cut(s)	652, 1004
FaeI	CATG	4 cut(s)	391, 397, 1192, 1393
FalI	AAGNNNNNCTT	2 cut(s)	1439, 1471
FaqI	GGGAC	5 cut(s)	655, 803, 863, 976, 1060
FatI	CATG	4 cut(s)	387, 393, 1188, 1389
FauI	CCCGC	4 cut(s)	299, 521, 526, 673
Fnu4HI	GCNGC	8 cut(s)	360, 853, 894, 1019, 1199, 1202, 1527, 1530
FokI	GGATG	4 cut(s)	521, 1265, 1313, 1443
FriOI	GRGCYC	1 cut(s)	1467
Fsp4HI	GCNGC	8 cut(s)	360, 853, 894, 1019, 1199, 1202, 1527, 1530
GlaI	GCGC	6 cut(s)	63, 565, 598, 658, 1096, 1197
GluI	GCNGC	8 cut(s)	360, 853, 894, 1019, 1199, 1202, 1527, 1530
GsaI	CCCAGC	1 cut(s)	769
GsuI	CTGGAG	1 cut(s)	1100
HaeII	RGCGCY	4 cut(s)	65, 660, 1098, 1199
HaeIII	GGCC	9 cut(s)	131, 228, 381, 585, 764, 846, 902, 1235, 1351
HgaI	GACGC	6 cut(s)	81, 580, 629, 634, 657, 685
HhaI	GCGC	6 cut(s)	64, 566, 599, 659, 1097, 1198
Hin1I	GRCGYC	6 cut(s)	591, 621, 729, 957, 1095, 1196
Hin1II	CATG	4 cut(s)	391, 397, 1192, 1393
Hin6I	GCGC	6 cut(s)	62, 564, 597, 657, 1095, 1196
HinP1I	GCGC	6 cut(s)	62, 564, 597, 657, 1095, 1196
HincII	GTYRAC	2 cut(s)	313, 1248
HindII	GTYRAC	2 cut(s)	313, 1248
HinfI	GANTC	5 cut(s)	264, 679, 1066, 1101, 1170
HphI	GGTGA	5 cut(s)	31, 104, 185, 469, 910
Hpy166II	GTNNAC	8 cut(s)	138, 155, 313, 342, 945, 1042, 1248, 1417
Hpy188III	TCNNGA	2 cut(s)	961, 1138
Hpy8I	GTNNAC	8 cut(s)	138, 155, 313, 342, 945, 1042, 1248, 1417
HpyAV	CCTTC	6 cut(s)	478, 553, 577, 838, 1085, 1417
HpyCH4III	ACNGT	1 cut(s)	1015
HpyCH4IV	ACGT	8 cut(s)	134, 729, 744, 876, 906, 957, 1073, 1208
HpyCH4V	TGCA	4 cut(s)	10, 342, 1389, 1517
HpyF3I	CTNAG	3 cut(s)	22, 402, 1332
HpySE526I	ACGT	8 cut(s)	134, 729, 744, 876, 906, 957, 1073, 1208
Hsp92I	GRCGYC	6 cut(s)	591, 621, 729, 957, 1095, 1196
Hsp92II	CATG	4 cut(s)	391, 397, 1192, 1393
HspAI	GCGC	6 cut(s)	62, 564, 597, 657, 1095, 1196
KasI	GGCGCC	2 cut(s)	1094, 1195
KroI	GCCGGC	3 cut(s)	1192, 1235, 1522
KroNI	GCCGGC	3 cut(s)	1194, 1237, 1524
Kzo9I	GATC	4 cut(s)	298, 547, 1260, 1368
LguI	GCTCTTC	2 cut(s)	1052, 1472
LmnI	GCTCC	5 cut(s)	299, 458, 1081, 1164, 1462
Lsp1109I	GCAGC	2 cut(s)	1005, 1516
LweI	GCATC	1 cut(s)	337
MaeII	ACGT	8 cut(s)	134, 729, 744, 876, 906, 957, 1073, 1208
MaeIII	GTNAC	4 cut(s)	17, 93, 697, 1451
MalI	GATC	4 cut(s)	300, 549, 1262, 1370
MbiI	CCGCTC	4 cut(s)	294, 453, 975, 1167
MboI	GATC	4 cut(s)	298, 547, 1260, 1368
MboII	GAAGA	8 cut(s)	466, 1063, 1069, 1237, 1240, 1459, 1493, 1504
MhlI	GDGCHC	3 cut(s)	344, 1086, 1467
MluCI	AATT	2 cut(s)	1219, 1512
Mly113I	GGCGCC	2 cut(s)	1095, 1196
MlyI	GAGTC	2 cut(s)	1110, 1179
MmeI	TCCRAC	9 cut(s)	241, 276, 294, 309, 528, 642, 739, 798, 1153
MroNI	GCCGGC	3 cut(s)	1192, 1235, 1522
MroXI	GAANNNNTTC	1 cut(s)	914
MseI	TTAA	1 cut(s)	1395
MslI	CAYNNNNRTG	2 cut(s)	221, 392
MspA1I	CMGCKG	2 cut(s)	1125, 1529
MspCI	CTTAAG	1 cut(s)	1394
MvaI	CCWGG	5 cut(s)	376, 1079, 1112, 1307, 1507
MvnI	CGCG	5 cut(s)	564, 597, 668, 696, 938
NaeI	GCCGGC	3 cut(s)	1194, 1237, 1524
NarI	GGCGCC	2 cut(s)	1095, 1196
NciI	CCSGG	8 cut(s)	52, 59, 128, 761, 785, 804, 805, 922
NcoI	CCATGG	1 cut(s)	393
NdeII	GATC	4 cut(s)	298, 547, 1260, 1368
NgoMIV	GCCGGC	3 cut(s)	1192, 1235, 1522
NlaIII	CATG	4 cut(s)	391, 397, 1192, 1393
NlaIV	GGNNCC	7 cut(s)	56, 380, 425, 797, 926, 1096, 1197
NmeAIII	GCCGAG	3 cut(s)	363, 567, 733
NmuCI	GTSAC	3 cut(s)	17, 93, 697
NspI	RCATGY	2 cut(s)	391, 1393
PaeI	GCATGC	2 cut(s)	391, 1393
PciSI	GCTCTTC	2 cut(s)	1052, 1472
PcsI	WCGNNNNNNNCGW	5 cut(s)	588, 615, 729, 864, 966
PdiI	GCCGGC	3 cut(s)	1194, 1237, 1524
PdmI	GAANNNNTTC	1 cut(s)	914
PfeI	GAWTC	3 cut(s)	264, 679, 1066
PflMI	CCANNNNNTGG	1 cut(s)	1111
PkrI	GCNGC	8 cut(s)	361, 854, 895, 1020, 1200, 1203, 1528, 1531
Ple19I	CGATCG	1 cut(s)	301
PleI	GAGTC	2 cut(s)	1109, 1178
PluTI	GGCGCC	2 cut(s)	1098, 1199
PmaCI	CACGTG	1 cut(s)	135
PmlI	CACGTG	1 cut(s)	135
PpsI	GAGTC	2 cut(s)	1109, 1178
Ppu21I	YACGTR	3 cut(s)	135, 745, 907
PpuMI	RGGWCCY	1 cut(s)	1140
Psp124BI	GAGCTC	1 cut(s)	1467
Psp5II	RGGWCCY	1 cut(s)	1140
Psp6I	CCWGG	5 cut(s)	374, 1077, 1110, 1305, 1505
PspCI	CACGTG	1 cut(s)	135
PspFI	CCCAGC	1 cut(s)	765
PspGI	CCWGG	5 cut(s)	374, 1077, 1110, 1305, 1505
PspN4I	GGNNCC	7 cut(s)	56, 380, 425, 797, 926, 1096, 1197
PspPI	GGNCC	8 cut(s)	188, 226, 282, 379, 712, 763, 1140, 1233
PspPPI	RGGWCCY	1 cut(s)	1140
PstNI	CAGNNNCTG	1 cut(s)	1111
PvuI	CGATCG	1 cut(s)	301
PvuII	CAGCTG	1 cut(s)	1529
RsaI	GTAC	5 cut(s)	335, 743, 1043, 1076, 1312
RsaNI	GTAC	5 cut(s)	334, 742, 1042, 1075, 1311
RseI	CAYNNNNRTG	2 cut(s)	221, 392
SacI	GAGCTC	1 cut(s)	1467
SapI	GCTCTTC	2 cut(s)	1052, 1472
SaqAI	TTAA	1 cut(s)	1395
SatI	GCNGC	8 cut(s)	360, 853, 894, 1019, 1199, 1202, 1527, 1530
Sau3AI	GATC	4 cut(s)	298, 547, 1260, 1368
Sau96I	GGNCC	8 cut(s)	188, 226, 282, 379, 712, 763, 1140, 1233
ScaI	AGTACT	1 cut(s)	335
SchI	GAGTC	2 cut(s)	1110, 1179
SduI	GDGCHC	3 cut(s)	344, 1086, 1467
SfaNI	GCATC	1 cut(s)	337
SfoI	GGCGCC	2 cut(s)	1096, 1197
SinI	GGWCC	4 cut(s)	188, 282, 712, 1140
SmaI	CCCGGG	1 cut(s)	805
SmiMI	CAYNNNNRTG	2 cut(s)	221, 392
SmlI	CTYRAG	3 cut(s)	65, 1144, 1394
SmoI	CTYRAG	3 cut(s)	65, 1144, 1394
SnaBI	TACGTA	1 cut(s)	745
SphI	GCATGC	2 cut(s)	391, 1393
Sse9I	AATT	2 cut(s)	1219, 1512
SspDI	GGCGCC	2 cut(s)	1094, 1195
SstI	GAGCTC	1 cut(s)	1467
StyI	CCWWGG	1 cut(s)	393
TaaI	ACNGT	1 cut(s)	1015
TaiI	ACGT	8 cut(s)	137, 732, 747, 879, 909, 960, 1076, 1211
TaqI	TCGA	7 cut(s)	330, 546, 609, 810, 837, 858, 1500
TasI	AATT	2 cut(s)	1219, 1512
TatI	WGTACW	1 cut(s)	333
TauI	GCSGC	5 cut(s)	362, 855, 896, 1201, 1204
TfiI	GAWTC	3 cut(s)	264, 679, 1066
Tru1I	TTAA	1 cut(s)	1395
Tru9I	TTAA	1 cut(s)	1395
TscAI	CASTG	1 cut(s)	102
TseFI	GTSAC	3 cut(s)	17, 93, 697
TseI	GCWGC	3 cut(s)	1018, 1526, 1529
Tsp45I	GTSAC	3 cut(s)	17, 93, 697
TspDTI	ATGAA	3 cut(s)	1043, 1177, 1351
TspGWI	ACGGA	3 cut(s)	201, 976, 1265
TspMI	CCCGGG	1 cut(s)	803
TspRI	CASTG	1 cut(s)	102
Van91I	CCANNNNNTGG	1 cut(s)	1111
Vha464I	CTTAAG	1 cut(s)	1394
VneI	GTGCAC	1 cut(s)	340
VpaK11BI	GGWCC	4 cut(s)	188, 282, 712, 1140
XapI	RAATTY	1 cut(s)	1219
XceI	RCATGY	2 cut(s)	391, 1393
XmaI	CCCGGG	1 cut(s)	803
XmnI	GAANNNNTTC	1 cut(s)	914
ZraI	GACGTC	2 cut(s)	730, 958
ZrmI	AGTACT	1 cut(s)	335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.