Prupe.1G094400_v2.0.a1

Protein GLUTAMINE DUMPER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0020865
Physical Location & Seq
Reverse (-)
7320008 .. 7320606
599 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G094400.1

Sequence Viewer

Length: 546 bp
ATGGCAGGGAGAGAGCCTTTTAACGTAACAGCCAGGGCACCGGCGGTGACATCACAGCGGTCACCATGGCATTCCCCGGTGCCCTACTTGTTCGGCGGCCTGGCAGCCATGCTGGGCCTAATCGCTTTCGCGCTTCTCATCTTAGCCTGCTCTTACTGGAAGCTCTCCGGCTACCTCGAGAGCGGGGAAAACGGCGCCGGATCGGAGCAGGACCTGGAGGCCGGAGAAGGCGGCAAAGGCGACGAGACGGCCCAGAAGGCCCCGCCGGTGTTCGAGGAGAAAATCTTGGTGATCATGGCGGGTGACGCCAAGCCAACTTTCTTGGCCACGCCCATGTCAAGTAGGTCTTCTTCTTTCGGCGCCAATAGCAGCAATAGCAGCAGCAGCAGCAGCAGTTGCAGCTGCAGCGAAAAGTCTGAGAAGTCGGTGGAAATGAGTGAGGTTGGGAAGCAAGAAAACGGCCATGATCATCAGGTACAGGCTAGTGAGAGCAGAGGGAATGGCCATGAGGCCTCAGATCAATCGGATCAGAGACCCGTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

182

Amino Acids

18.99

Weight (kDa)

4.97

Isoelectric Point (pI)

67.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0020865)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57685
malus_domestica MD13G1263000.v1.1 MD16G1264600.v1.1
prunus_persica Prupe.1G094400_v2.0.a1
pyrus_communis pycom16g23390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 37, 79, 194, 359
AccBSI CCGCTC 1 cut(s) 183
AccII CGCG 1 cut(s) 131
AciI CCGC 7 cut(s) 44, 58, 96, 183, 231, 263, 299
AclWI GGATC 2 cut(s) 208, 534
AcoI YGGCCR 3 cut(s) 324, 460, 502
AcyI GRCGYC 3 cut(s) 195, 306, 360
AfaI GTAC 1 cut(s) 477
AjnI CCWGG 3 cut(s) 32, 99, 213
AjuI GAANNNNNNNTTGG 2 cut(s) 302, 334
AluBI AGCT 2 cut(s) 163, 402
AluI AGCT 2 cut(s) 163, 402
Alw26I GTCTC 2 cut(s) 239, 526
AlwI GGATC 2 cut(s) 208, 534
AlwNI CAGNNNCTG 1 cut(s) 214
Ama87I CYCGRG 1 cut(s) 176
AoxI GGCC 9 cut(s) 97, 115, 219, 249, 258, 324, 460, 502, 510
AspLEI GCGC 3 cut(s) 133, 197, 362
AspS9I GGNCC 4 cut(s) 115, 211, 250, 259
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 4 cut(s) 54, 58, 301, 314
AvaI CYCGRG 1 cut(s) 176
AvaII GGWCC 1 cut(s) 211
BaeGI GKGCMC 2 cut(s) 40, 84
BalI TGGCCA 2 cut(s) 326, 504
BanI GGYRCC 4 cut(s) 37, 79, 194, 359
BarI GAAGNNNNNNTAC 2 cut(s) 334, 366
BbsI GAAGAC 1 cut(s) 339
BceAI ACGGC 3 cut(s) 208, 264, 475
BciT130I CCWGG 3 cut(s) 34, 101, 215
BclI TGATCA 2 cut(s) 291, 466
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 2 cut(s) 239, 526
BfaI CTAG 1 cut(s) 483
BfmI CTRYAG 1 cut(s) 403
BfoI RGCGCY 2 cut(s) 198, 363
BglI GCCNNNNNGGC 1 cut(s) 257
Bme1390I CCNGG 4 cut(s) 34, 77, 101, 215
Bme18I GGWCC 1 cut(s) 211
BmeT110I CYCGRG 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 115, 211, 250, 259
BmiI GGNNCC 5 cut(s) 39, 81, 196, 261, 361
BmrFI CCNGG 4 cut(s) 34, 77, 101, 215
BpiI GAAGAC 1 cut(s) 339
BpmI CTGGAG 1 cut(s) 236
BpuMI CCSGG 1 cut(s) 77
BsaHI GRCGYC 3 cut(s) 195, 306, 360
BsaI GGTCTC 1 cut(s) 526
BsaJI CCNNGG 3 cut(s) 33, 65, 75
Bse118I RCCGGY 2 cut(s) 40, 265
Bse1I ACTGG 1 cut(s) 161
BseBI CCWGG 3 cut(s) 34, 101, 215
BseDI CCNNGG 3 cut(s) 33, 65, 75
BseMII CTCAG 2 cut(s) 408, 528
BseNI ACTGG 1 cut(s) 161
BseRI GAGGAG 1 cut(s) 290
BseSI GKGCMC 2 cut(s) 40, 84
BseYI CCCAGC 1 cut(s) 112
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 9 cut(s) 99, 117, 221, 251, 260, 326, 462, 504, 512
BshNI GGYRCC 4 cut(s) 37, 79, 194, 359
BsiHKCI CYCGRG 1 cut(s) 176
BsiSI CCGG 6 cut(s) 41, 77, 168, 198, 222, 266
BsmAI GTCTC 2 cut(s) 239, 526
BsmBI CGTCTC 1 cut(s) 239
BsmI GAATGC 1 cut(s) 70
BsnI GGCC 9 cut(s) 99, 117, 221, 251, 260, 326, 462, 504, 512
Bso31I GGTCTC 1 cut(s) 526
BsoBI CYCGRG 1 cut(s) 176
Bsp1286I GDGCHC 2 cut(s) 40, 84
Bsp143I GATC 5 cut(s) 200, 291, 466, 517, 526
Bsp19I CCATGG 1 cut(s) 65
BspACI CCGC 7 cut(s) 44, 58, 96, 183, 231, 263, 299
BspANI GGCC 9 cut(s) 99, 117, 221, 251, 260, 326, 462, 504, 512
BspCNI CTCAG 2 cut(s) 409, 527
BspFNI CGCG 1 cut(s) 131
BspLI GGNNCC 5 cut(s) 39, 81, 196, 261, 361
BspMAI CTGCAG 1 cut(s) 407
BspPI GGATC 2 cut(s) 208, 534
BspT107I GGYRCC 4 cut(s) 37, 79, 194, 359
BspTNI GGTCTC 1 cut(s) 526
BsrBI CCGCTC 1 cut(s) 183
BsrFI RCCGGY 2 cut(s) 40, 265
BsrI ACTGG 1 cut(s) 161
BssAI RCCGGY 2 cut(s) 40, 265
BssECI CCNNGG 3 cut(s) 33, 65, 75
BssMI GATC 5 cut(s) 200, 291, 466, 517, 526
BssNI GRCGYC 3 cut(s) 195, 306, 360
BssT1I CCWWGG 1 cut(s) 65
Bst2UI CCWGG 3 cut(s) 34, 101, 215
BstACI GRCGYC 3 cut(s) 195, 306, 360
BstAPI GCANNNNNTGC 1 cut(s) 396
BstC8I GCNNGC 1 cut(s) 148
BstDEI CTNAG 3 cut(s) 142, 417, 514
BstDSI CCRYGG 1 cut(s) 65
BstEII GGTNACC 1 cut(s) 60
BstFNI CGCG 1 cut(s) 131
BstH2I RGCGCY 2 cut(s) 198, 363
BstHHI GCGC 3 cut(s) 133, 197, 362
BstKTI GATC 5 cut(s) 203, 294, 469, 520, 529
BstMAI GTCTC 2 cut(s) 239, 526
BstMBI GATC 5 cut(s) 200, 291, 466, 517, 526
BstNI CCWGG 3 cut(s) 34, 101, 215
BstPI GGTNACC 1 cut(s) 60
BstSCI CCNGG 4 cut(s) 32, 75, 99, 213
BstSFI CTRYAG 1 cut(s) 403
BstSLI GKGCMC 2 cut(s) 40, 84
BstUI CGCG 1 cut(s) 131
BstV2I GAAGAC 1 cut(s) 339
BsuRI GGCC 9 cut(s) 99, 117, 221, 251, 260, 326, 462, 504, 512
BtgI CCRYGG 1 cut(s) 65
Cac8I GCNNGC 1 cut(s) 148
CaiI CAGNNNCTG 1 cut(s) 214
CfoI GCGC 3 cut(s) 133, 197, 362
Cfr10I RCCGGY 2 cut(s) 40, 265
Cfr13I GGNCC 4 cut(s) 115, 211, 250, 259
CseI GACGC 1 cut(s) 314
Csp6I GTAC 1 cut(s) 476
CviAII CATG 6 cut(s) 66, 109, 295, 334, 464, 506
CviQI GTAC 1 cut(s) 476
DdeI CTNAG 3 cut(s) 142, 417, 514
DinI GGCGCC 2 cut(s) 196, 361
DpnI GATC 5 cut(s) 202, 293, 468, 519, 528
DpnII GATC 5 cut(s) 200, 291, 466, 517, 526
EaeI YGGCCR 3 cut(s) 324, 460, 502
Eco130I CCWWGG 1 cut(s) 65
Eco147I AGGCCT 1 cut(s) 512
Eco31I GGTCTC 1 cut(s) 526
Eco47I GGWCC 1 cut(s) 211
Eco88I CYCGRG 1 cut(s) 176
Eco91I GGTNACC 1 cut(s) 60
EcoO109I RGGNCCY 2 cut(s) 211, 259
EcoO65I GGTNACC 1 cut(s) 60
EcoRII CCWGG 3 cut(s) 32, 99, 213
EcoT14I CCWWGG 1 cut(s) 65
EgeI GGCGCC 2 cut(s) 196, 361
EheI GGCGCC 2 cut(s) 196, 361
ErhI CCWWGG 1 cut(s) 65
Esp3I CGTCTC 1 cut(s) 239
FaeI CATG 6 cut(s) 69, 112, 298, 337, 467, 509
FaiI YATR 6 cut(s) 67, 110, 296, 335, 465, 507
FalI AAGNNNNNCTT 2 cut(s) 331, 363
FatI CATG 6 cut(s) 65, 108, 294, 333, 463, 505
FauI CCCGC 3 cut(s) 176, 270, 292
FbaI TGATCA 2 cut(s) 291, 466
FspBI CTAG 1 cut(s) 483
GlaI GCGC 3 cut(s) 132, 196, 361
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 1 cut(s) 236
HaeII RGCGCY 2 cut(s) 198, 363
HaeIII GGCC 9 cut(s) 99, 117, 221, 251, 260, 326, 462, 504, 512
HapII CCGG 6 cut(s) 41, 77, 168, 198, 222, 266
HgaI GACGC 1 cut(s) 314
HhaI GCGC 3 cut(s) 133, 197, 362
Hin1I GRCGYC 3 cut(s) 195, 306, 360
Hin1II CATG 6 cut(s) 69, 112, 298, 337, 467, 509
Hin6I GCGC 3 cut(s) 131, 195, 360
HinP1I GCGC 3 cut(s) 131, 195, 360
HpaII CCGG 6 cut(s) 41, 77, 168, 198, 222, 266
HphI GGTGA 4 cut(s) 54, 58, 301, 314
Hpy188I TCNGA 5 cut(s) 205, 418, 517, 526, 531
Hpy188III TCNNGA 1 cut(s) 178
Hpy99I CGWCG 1 cut(s) 245
HpyAV CCTTC 2 cut(s) 221, 250
HpyCH4IV ACGT 1 cut(s) 24
HpyCH4V TGCA 2 cut(s) 399, 405
HpyF3I CTNAG 3 cut(s) 142, 417, 514
HpySE526I ACGT 1 cut(s) 24
Hsp92I GRCGYC 3 cut(s) 195, 306, 360
Hsp92II CATG 6 cut(s) 69, 112, 298, 337, 467, 509
HspAI GCGC 3 cut(s) 131, 195, 360
KasI GGCGCC 2 cut(s) 194, 359
Ksp22I TGATCA 2 cut(s) 291, 466
Kzo9I GATC 5 cut(s) 200, 291, 466, 517, 526
LmnI GCTCC 1 cut(s) 205
MaeI CTAG 1 cut(s) 483
MaeII ACGT 1 cut(s) 24
MaeIII GTNAC 4 cut(s) 25, 46, 60, 302
MalI GATC 5 cut(s) 202, 293, 468, 519, 528
MbiI CCGCTC 1 cut(s) 183
MboI GATC 5 cut(s) 200, 291, 466, 517, 526
MboII GAAGA 2 cut(s) 339, 342
MhlI GDGCHC 2 cut(s) 40, 84
MlsI TGGCCA 2 cut(s) 326, 504
MluCI AATT 1 cut(s) 541
MluNI TGGCCA 2 cut(s) 326, 504
Mly113I GGCGCC 2 cut(s) 195, 360
MnlI CCTC 7 cut(s) 185, 211, 268, 433, 488, 502, 523
Mox20I TGGCCA 2 cut(s) 326, 504
MscI TGGCCA 2 cut(s) 326, 504
MseI TTAA 3 cut(s) 21, 540, 544
MslI CAYNNNNRTG 1 cut(s) 332
Msp20I TGGCCA 2 cut(s) 326, 504
MspA1I CMGCKG 2 cut(s) 58, 402
MspI CCGG 6 cut(s) 41, 77, 168, 198, 222, 266
MspR9I CCNGG 4 cut(s) 34, 77, 101, 215
Mva1269I GAATGC 1 cut(s) 70
MvaI CCWGG 3 cut(s) 34, 101, 215
MvnI CGCG 1 cut(s) 131
NarI GGCGCC 2 cut(s) 195, 360
NciI CCSGG 1 cut(s) 77
NcoI CCATGG 1 cut(s) 65
NdeII GATC 5 cut(s) 200, 291, 466, 517, 526
NlaIII CATG 6 cut(s) 69, 112, 298, 337, 467, 509
NlaIV GGNNCC 5 cut(s) 39, 81, 196, 261, 361
NmuCI GTSAC 3 cut(s) 46, 60, 302
PacI TTAATTAA 1 cut(s) 544
PaeR7I CTCGAG 1 cut(s) 176
PceI AGGCCT 1 cut(s) 512
PctI GAATGC 1 cut(s) 70
PluTI GGCGCC 2 cut(s) 198, 363
PpuMI RGGWCCY 1 cut(s) 211
Psp5II RGGWCCY 1 cut(s) 211
Psp6I CCWGG 3 cut(s) 32, 99, 213
PspEI GGTNACC 1 cut(s) 60
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 3 cut(s) 32, 99, 213
PspN4I GGNNCC 5 cut(s) 39, 81, 196, 261, 361
PspPI GGNCC 4 cut(s) 115, 211, 250, 259
PspPPI RGGWCCY 1 cut(s) 211
PstI CTGCAG 1 cut(s) 407
PstNI CAGNNNCTG 1 cut(s) 214
PvuII CAGCTG 1 cut(s) 402
RsaI GTAC 1 cut(s) 477
RsaNI GTAC 1 cut(s) 476
RseI CAYNNNNRTG 1 cut(s) 332
SaqAI TTAA 3 cut(s) 21, 540, 544
Sau3AI GATC 5 cut(s) 200, 291, 466, 517, 526
Sau96I GGNCC 4 cut(s) 115, 211, 250, 259
ScrFI CCNGG 4 cut(s) 34, 77, 101, 215
SduI GDGCHC 2 cut(s) 40, 84
SetI ASST 8 cut(s) 27, 165, 177, 216, 347, 404, 444, 477
SfcI CTRYAG 1 cut(s) 403
SfiI GGCCNNNNNGGCC 1 cut(s) 257
SfoI GGCGCC 2 cut(s) 196, 361
Sfr274I CTCGAG 1 cut(s) 176
SgrAI CRCCGGYG 2 cut(s) 40, 265
SinI GGWCC 1 cut(s) 211
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 1 cut(s) 332
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
Sse9I AATT 1 cut(s) 541
SseBI AGGCCT 1 cut(s) 512
SsiI CCGC 7 cut(s) 44, 58, 96, 183, 231, 263, 299
SspDI GGCGCC 2 cut(s) 194, 359
SspMI CTAG 1 cut(s) 483
StuI AGGCCT 1 cut(s) 512
StyD4I CCNGG 4 cut(s) 32, 75, 99, 213
StyI CCWWGG 1 cut(s) 65
TaiI ACGT 1 cut(s) 27
TaqI TCGA 2 cut(s) 177, 273
TasI AATT 1 cut(s) 541
TauI GCSGC 2 cut(s) 99, 234
Tru1I TTAA 3 cut(s) 21, 540, 544
Tru9I TTAA 3 cut(s) 21, 540, 544
TseFI GTSAC 3 cut(s) 46, 60, 302
Tsp45I GTSAC 3 cut(s) 46, 60, 302
VpaK11BI GGWCC 1 cut(s) 211
XhoI CTCGAG 1 cut(s) 176
XspI CTAG 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.