transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30410 AT4G30410 |
| malus_domestica | MD13G1260000.v1.1 MD16G1262200.v1.1 |
| prunus_persica | Prupe.1G097600_v2.0.a1 |
| pyrus_communis | pycom16g23100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 533 |
| Acc16I | TGCGCA | 1 cut(s) | 5 |
| AccI | GTMKAC | 1 cut(s) | 226 |
| AccII | CGCG | 2 cut(s) | 177, 342 |
| AciI | CCGC | 3 cut(s) | 126, 175, 505 |
| AcsI | RAATTY | 2 cut(s) | 29, 425 |
| AgsI | TTSAA | 2 cut(s) | 147, 286 |
| AjiI | CACGTC | 1 cut(s) | 346 |
| AjnI | CCWGG | 1 cut(s) | 415 |
| AluBI | AGCT | 2 cut(s) | 72, 488 |
| AluI | AGCT | 2 cut(s) | 72, 488 |
| Alw21I | GWGCWC | 2 cut(s) | 402, 490 |
| Alw26I | GTCTC | 2 cut(s) | 59, 483 |
| AoxI | GGCC | 1 cut(s) | 111 |
| ApoI | RAATTY | 2 cut(s) | 29, 425 |
| AspLEI | GCGC | 3 cut(s) | 6, 179, 342 |
| AspS9I | GGNCC | 1 cut(s) | 233 |
| AsuHPI | GGTGA | 1 cut(s) | 277 |
| AvaII | GGWCC | 1 cut(s) | 233 |
| BanII | GRGCYC | 1 cut(s) | 490 |
| BauI | CACGAG | 1 cut(s) | 393 |
| Bbv12I | GWGCWC | 2 cut(s) | 402, 490 |
| BccI | CCATC | 2 cut(s) | 101, 256 |
| BceAI | ACGGC | 3 cut(s) | 164, 172, 303 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 193, 227, 250, 284 |
| BciT130I | CCWGG | 1 cut(s) | 417 |
| BcoDI | GTCTC | 2 cut(s) | 59, 483 |
| BfaI | CTAG | 1 cut(s) | 464 |
| BglII | AGATCT | 1 cut(s) | 279 |
| BisI | GCNGC | 1 cut(s) | 175 |
| BlsI | GCNGC | 1 cut(s) | 176 |
| Bme1390I | CCNGG | 1 cut(s) | 417 |
| Bme18I | GGWCC | 1 cut(s) | 233 |
| BmgBI | CACGTC | 1 cut(s) | 346 |
| BmgT120I | GGNCC | 1 cut(s) | 233 |
| BmiI | GGNNCC | 2 cut(s) | 173, 234 |
| BmrFI | CCNGG | 1 cut(s) | 417 |
| BmrI | ACTGGG | 1 cut(s) | 239 |
| BmsI | GCATC | 1 cut(s) | 258 |
| BmuI | ACTGGG | 1 cut(s) | 239 |
| BpmI | CTGGAG | 1 cut(s) | 438 |
| Bpu10I | CCTNAGC | 1 cut(s) | 489 |
| BpuEI | CTTGAG | 4 cut(s) | 5, 20, 232, 386 |
| BsaBI | GATNNNNATC | 1 cut(s) | 92 |
| BsaI | GGTCTC | 1 cut(s) | 59 |
| BsaJI | CCNNGG | 1 cut(s) | 138 |
| Bse1I | ACTGG | 1 cut(s) | 234 |
| Bse8I | GATNNNNATC | 1 cut(s) | 92 |
| BseBI | CCWGG | 1 cut(s) | 417 |
| BseDI | CCNNGG | 1 cut(s) | 138 |
| BseGI | GGATG | 1 cut(s) | 442 |
| BseJI | GATNNNNATC | 1 cut(s) | 92 |
| BseMII | CTCAG | 2 cut(s) | 503, 516 |
| BseNI | ACTGG | 1 cut(s) | 234 |
| BseRI | GAGGAG | 1 cut(s) | 435 |
| Bsh1236I | CGCG | 2 cut(s) | 177, 342 |
| BshFI | GGCC | 1 cut(s) | 113 |
| BsiHKAI | GWGCWC | 2 cut(s) | 402, 490 |
| BsiSI | CCGG | 1 cut(s) | 295 |
| BsmAI | GTCTC | 2 cut(s) | 59, 483 |
| BsnI | GGCC | 1 cut(s) | 113 |
| Bso31I | GGTCTC | 1 cut(s) | 59 |
| Bsp1286I | GDGCHC | 2 cut(s) | 402, 490 |
| Bsp143I | GATC | 2 cut(s) | 251, 279 |
| Bsp19I | CCATGG | 1 cut(s) | 138 |
| BspACI | CCGC | 3 cut(s) | 126, 175, 505 |
| BspANI | GGCC | 1 cut(s) | 113 |
| BspCNI | CTCAG | 2 cut(s) | 502, 517 |
| BspFNI | CGCG | 2 cut(s) | 177, 342 |
| BspLI | GGNNCC | 2 cut(s) | 173, 234 |
| BspQI | GCTCTTC | 1 cut(s) | 79 |
| BspTNI | GGTCTC | 1 cut(s) | 59 |
| BsrI | ACTGG | 1 cut(s) | 234 |
| BssECI | CCNNGG | 1 cut(s) | 138 |
| BssMI | GATC | 2 cut(s) | 251, 279 |
| BssNAI | GTATAC | 1 cut(s) | 227 |
| BssSI | CACGAG | 1 cut(s) | 393 |
| BssT1I | CCWWGG | 1 cut(s) | 138 |
| Bst1107I | GTATAC | 1 cut(s) | 227 |
| Bst2BI | CACGAG | 1 cut(s) | 393 |
| Bst2UI | CCWGG | 1 cut(s) | 417 |
| Bst6I | CTCTTC | 2 cut(s) | 79, 365 |
| BstC8I | GCNNGC | 1 cut(s) | 486 |
| BstDEI | CTNAG | 2 cut(s) | 489, 525 |
| BstDSI | CCRYGG | 1 cut(s) | 138 |
| BstF5I | GGATG | 1 cut(s) | 442 |
| BstFNI | CGCG | 2 cut(s) | 177, 342 |
| BstHHI | GCGC | 3 cut(s) | 6, 179, 342 |
| BstKTI | GATC | 2 cut(s) | 254, 282 |
| BstMAI | GTCTC | 2 cut(s) | 59, 483 |
| BstMBI | GATC | 2 cut(s) | 251, 279 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 134, 185 |
| BstNI | CCWGG | 1 cut(s) | 417 |
| BstSCI | CCNGG | 1 cut(s) | 415 |
| BstUI | CGCG | 2 cut(s) | 177, 342 |
| BstX2I | RGATCY | 1 cut(s) | 279 |
| BstYI | RGATCY | 1 cut(s) | 279 |
| BstZ17I | GTATAC | 1 cut(s) | 227 |
| BsuRI | GGCC | 1 cut(s) | 113 |
| BtgI | CCRYGG | 1 cut(s) | 138 |
| BtrI | CACGTC | 1 cut(s) | 346 |
| BtsCI | GGATG | 1 cut(s) | 442 |
| BtsIMutI | CAGTG | 2 cut(s) | 261, 522 |
| Cac8I | GCNNGC | 1 cut(s) | 486 |
| CfoI | GCGC | 3 cut(s) | 6, 179, 342 |
| Cfr13I | GGNCC | 1 cut(s) | 233 |
| CviAII | CATG | 3 cut(s) | 97, 139, 430 |
| CviJI | RGCY | 9 cut(s) | 72, 113, 137, 143, 174, 188, 294, 318, 488 |
| CviKI_1 | RGCY | 9 cut(s) | 72, 113, 137, 143, 174, 188, 294, 318, 488 |
| DdeI | CTNAG | 2 cut(s) | 489, 525 |
| DpnI | GATC | 2 cut(s) | 253, 281 |
| DpnII | GATC | 2 cut(s) | 251, 279 |
| Eam1104I | CTCTTC | 2 cut(s) | 79, 365 |
| EarI | CTCTTC | 2 cut(s) | 79, 365 |
| Ecl136II | GAGCTC | 1 cut(s) | 488 |
| Eco130I | CCWWGG | 1 cut(s) | 138 |
| Eco24I | GRGCYC | 1 cut(s) | 490 |
| Eco31I | GGTCTC | 1 cut(s) | 59 |
| Eco47I | GGWCC | 1 cut(s) | 233 |
| Eco53kI | GAGCTC | 1 cut(s) | 488 |
| EcoICRI | GAGCTC | 1 cut(s) | 488 |
| EcoO109I | RGGNCCY | 1 cut(s) | 233 |
| EcoRI | GAATTC | 1 cut(s) | 425 |
| EcoRII | CCWGG | 1 cut(s) | 415 |
| EcoT14I | CCWWGG | 1 cut(s) | 138 |
| EcoT38I | GRGCYC | 1 cut(s) | 490 |
| ErhI | CCWWGG | 1 cut(s) | 138 |
| FaeI | CATG | 3 cut(s) | 100, 142, 433 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 266, 298 |
| FatI | CATG | 3 cut(s) | 96, 138, 429 |
| FblI | GTMKAC | 1 cut(s) | 226 |
| Fnu4HI | GCNGC | 1 cut(s) | 175 |
| FokI | GGATG | 1 cut(s) | 449 |
| FriOI | GRGCYC | 1 cut(s) | 490 |
| Fsp4HI | GCNGC | 1 cut(s) | 175 |
| FspBI | CTAG | 1 cut(s) | 464 |
| FspI | TGCGCA | 1 cut(s) | 5 |
| GlaI | GCGC | 3 cut(s) | 5, 178, 341 |
| GluI | GCNGC | 1 cut(s) | 175 |
| GsuI | CTGGAG | 1 cut(s) | 438 |
| HaeIII | GGCC | 1 cut(s) | 113 |
| HapII | CCGG | 1 cut(s) | 295 |
| HhaI | GCGC | 3 cut(s) | 6, 179, 342 |
| Hin1II | CATG | 3 cut(s) | 100, 142, 433 |
| Hin6I | GCGC | 3 cut(s) | 4, 177, 340 |
| HinP1I | GCGC | 3 cut(s) | 4, 177, 340 |
| HinfI | GANTC | 2 cut(s) | 210, 406 |
| HpaII | CCGG | 1 cut(s) | 295 |
| HphI | GGTGA | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 1 cut(s) | 227 |
| Hpy188I | TCNGA | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 4 cut(s) | 37, 249, 283, 403 |
| Hpy8I | GTNNAC | 1 cut(s) | 227 |
| Hpy99I | CGWCG | 2 cut(s) | 218, 347 |
| HpyAV | CCTTC | 1 cut(s) | 103 |
| HpyCH4IV | ACGT | 1 cut(s) | 345 |
| HpyCH4V | TGCA | 4 cut(s) | 66, 271, 306, 455 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 134, 185 |
| HpyF3I | CTNAG | 2 cut(s) | 489, 525 |
| HpySE526I | ACGT | 1 cut(s) | 345 |
| Hsp92II | CATG | 3 cut(s) | 100, 142, 433 |
| HspAI | GCGC | 3 cut(s) | 4, 177, 340 |
| Kzo9I | GATC | 2 cut(s) | 251, 279 |
| LguI | GCTCTTC | 1 cut(s) | 79 |
| LmnI | GCTCC | 1 cut(s) | 171 |
| LpnPI | CCDG | 5 cut(s) | 215, 308, 402, 429, 476 |
| LweI | GCATC | 1 cut(s) | 258 |
| MaeI | CTAG | 1 cut(s) | 464 |
| MaeII | ACGT | 1 cut(s) | 345 |
| MalI | GATC | 2 cut(s) | 253, 281 |
| MboI | GATC | 2 cut(s) | 251, 279 |
| MboII | GAAGA | 6 cut(s) | 66, 94, 97, 289, 382, 397 |
| MflI | RGATCY | 1 cut(s) | 279 |
| MhlI | GDGCHC | 2 cut(s) | 402, 490 |
| MluCI | AATT | 3 cut(s) | 7, 29, 425 |
| MlyI | GAGTC | 2 cut(s) | 219, 415 |
| MmeI | TCCRAC | 1 cut(s) | 149 |
| MnlI | CCTC | 7 cut(s) | 25, 246, 256, 291, 327, 413, 427 |
| MslI | CAYNNNNRTG | 2 cut(s) | 119, 137 |
| MspI | CCGG | 1 cut(s) | 295 |
| MspR9I | CCNGG | 1 cut(s) | 417 |
| MvaI | CCWGG | 1 cut(s) | 417 |
| MvnI | CGCG | 2 cut(s) | 177, 342 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 134, 185 |
| NcoI | CCATGG | 1 cut(s) | 138 |
| NdeII | GATC | 2 cut(s) | 251, 279 |
| NlaIII | CATG | 3 cut(s) | 100, 142, 433 |
| NlaIV | GGNNCC | 2 cut(s) | 173, 234 |
| NsbI | TGCGCA | 1 cut(s) | 5 |
| PciSI | GCTCTTC | 1 cut(s) | 79 |
| PfoI | TCCNGGA | 1 cut(s) | 415 |
| PkrI | GCNGC | 1 cut(s) | 176 |
| PleI | GAGTC | 2 cut(s) | 218, 414 |
| PpsI | GAGTC | 2 cut(s) | 218, 414 |
| PpuMI | RGGWCCY | 1 cut(s) | 233 |
| PsiI | TTATAA | 1 cut(s) | 533 |
| Psp124BI | GAGCTC | 1 cut(s) | 490 |
| Psp5II | RGGWCCY | 1 cut(s) | 233 |
| Psp6I | CCWGG | 1 cut(s) | 415 |
| PspGI | CCWGG | 1 cut(s) | 415 |
| PspN4I | GGNNCC | 2 cut(s) | 173, 234 |
| PspPI | GGNCC | 1 cut(s) | 233 |
| PspPPI | RGGWCCY | 1 cut(s) | 233 |
| PsuI | RGATCY | 1 cut(s) | 279 |
| RseI | CAYNNNNRTG | 2 cut(s) | 119, 137 |
| SacI | GAGCTC | 1 cut(s) | 490 |
| SapI | GCTCTTC | 1 cut(s) | 79 |
| SatI | GCNGC | 1 cut(s) | 175 |
| Sau3AI | GATC | 2 cut(s) | 251, 279 |
| Sau96I | GGNCC | 1 cut(s) | 233 |
| SchI | GAGTC | 2 cut(s) | 219, 415 |
| ScrFI | CCNGG | 1 cut(s) | 417 |
| SduI | GDGCHC | 2 cut(s) | 402, 490 |
| SetI | ASST | 6 cut(s) | 17, 55, 74, 348, 490, 495 |
| SfaNI | GCATC | 1 cut(s) | 258 |
| SinI | GGWCC | 1 cut(s) | 233 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 119, 137 |
| SmlI | CTYRAG | 4 cut(s) | 20, 35, 247, 401 |
| SmoI | CTYRAG | 4 cut(s) | 20, 35, 247, 401 |
| Sse9I | AATT | 3 cut(s) | 7, 29, 425 |
| SsiI | CCGC | 3 cut(s) | 126, 175, 505 |
| SspMI | CTAG | 1 cut(s) | 464 |
| SstI | GAGCTC | 1 cut(s) | 490 |
| StyD4I | CCNGG | 1 cut(s) | 415 |
| StyI | CCWWGG | 1 cut(s) | 138 |
| TaiI | ACGT | 1 cut(s) | 348 |
| TaqI | TCGA | 2 cut(s) | 260, 362 |
| TasI | AATT | 3 cut(s) | 7, 29, 425 |
| TauI | GCSGC | 1 cut(s) | 177 |
| TscAI | CASTG | 2 cut(s) | 261, 529 |
| TspDTI | ATGAA | 1 cut(s) | 418 |
| TspRI | CASTG | 2 cut(s) | 261, 529 |
| VpaK11BI | GGWCC | 1 cut(s) | 233 |
| XapI | RAATTY | 2 cut(s) | 29, 425 |
| XmiI | GTMKAC | 1 cut(s) | 226 |
| XspI | CTAG | 1 cut(s) | 464 |