Prupe.1G116300_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
9166800 .. 9167841
1042 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G116300.2

Sequence Viewer

Length: 270 bp
ATGGGGATAAATATTATATTCCAAATTTTTGTAGCCTACTTGTTTTTGTTGGTTAGCTGCTCAGCCCAAAATAATGTTCCTGCTGTTTTCACTTTTGGCGATTCCTTGGTTGATGTGGGGAACAACAACAACCTTCGAACTATAGCTAAGGCAAATTTTTACCCCCATGGAATGGATTTTGGGAATAACCCAACAGGAAGATTTTCAAATGGGAGAACAGTTGTTGACATTATTCAGTACAGACCACCATTGCCTCTCGTTGGGGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

9.76

Weight (kDa)

7.94

Isoelectric Point (pI)

22.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019806)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 172
AcsI RAATTY 2 cut(s) 24, 154
AfaI GTAC 1 cut(s) 239
AfiI CCNNNNNNNGG 2 cut(s) 172, 260
AgsI TTSAA 1 cut(s) 207
AjuI GAANNNNNNNTTGG 2 cut(s) 60, 92
AluBI AGCT 2 cut(s) 57, 146
AluI AGCT 2 cut(s) 57, 146
ApeKI GCWGC 1 cut(s) 57
ApoI RAATTY 2 cut(s) 24, 154
Asp700I GAANNNNTTC 1 cut(s) 202
AsuII TTCGAA 1 cut(s) 136
BbvI GCAGC 1 cut(s) 44
BfmI CTRYAG 1 cut(s) 141
BisI GCNGC 1 cut(s) 58
BlpI GCTNAGC 1 cut(s) 61
BlsI GCNGC 1 cut(s) 59
Bpu10I CCTNAGC 1 cut(s) 147
Bpu1102I GCTNAGC 1 cut(s) 61
Bpu14I TTCGAA 1 cut(s) 136
BsaJI CCNNGG 2 cut(s) 105, 166
Bsc4I CCNNNNNNNGG 2 cut(s) 172, 260
Bse3DI GCAATG 1 cut(s) 248
BseDI CCNNGG 2 cut(s) 105, 166
BseLI CCNNNNNNNGG 2 cut(s) 172, 260
BseMI GCAATG 1 cut(s) 248
BseMII CTCAG 1 cut(s) 75
BseXI GCAGC 1 cut(s) 44
BslI CCNNNNNNNGG 2 cut(s) 172, 260
Bsp119I TTCGAA 1 cut(s) 136
Bsp1720I GCTNAGC 1 cut(s) 61
Bsp19I CCATGG 1 cut(s) 166
BspCNI CTCAG 1 cut(s) 74
BspT104I TTCGAA 1 cut(s) 136
BsrDI GCAATG 1 cut(s) 248
BssECI CCNNGG 2 cut(s) 105, 166
BssT1I CCWWGG 2 cut(s) 105, 166
Bst4CI ACNGT 1 cut(s) 220
BstBI TTCGAA 1 cut(s) 136
BstDEI CTNAG 2 cut(s) 61, 147
BstDSI CCRYGG 1 cut(s) 166
BstSFI CTRYAG 1 cut(s) 141
BstV1I GCAGC 1 cut(s) 44
BtgI CCRYGG 1 cut(s) 166
Csp6I GTAC 1 cut(s) 238
CviAII CATG 1 cut(s) 167
CviJI RGCY 4 cut(s) 35, 57, 65, 146
CviKI_1 RGCY 4 cut(s) 35, 57, 65, 146
CviQI GTAC 1 cut(s) 238
DdeI CTNAG 2 cut(s) 61, 147
Eco130I CCWWGG 2 cut(s) 105, 166
EcoT14I CCWWGG 2 cut(s) 105, 166
ErhI CCWWGG 2 cut(s) 105, 166
FaeI CATG 1 cut(s) 170
FaiI YATR 3 cut(s) 17, 143, 168
FatI CATG 1 cut(s) 166
Fnu4HI GCNGC 1 cut(s) 58
Fsp4HI GCNGC 1 cut(s) 58
GluI GCNGC 1 cut(s) 58
Hin1II CATG 1 cut(s) 170
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HinfI GANTC 1 cut(s) 101
Hpy166II GTNNAC 1 cut(s) 226
Hpy8I GTNNAC 1 cut(s) 226
HpyAV CCTTC 1 cut(s) 143
HpyCH4III ACNGT 1 cut(s) 220
HpyF3I CTNAG 2 cut(s) 61, 147
Hsp92II CATG 1 cut(s) 170
LpnPI CCDG 2 cut(s) 93, 180
Lsp1109I GCAGC 1 cut(s) 44
MboII GAAGA 1 cut(s) 210
MluCI AATT 2 cut(s) 24, 154
MnlI CCTC 1 cut(s) 264
MroXI GAANNNNTTC 1 cut(s) 202
NcoI CCATGG 1 cut(s) 166
NlaIII CATG 1 cut(s) 170
NspV TTCGAA 1 cut(s) 136
PdmI GAANNNNTTC 1 cut(s) 202
PfeI GAWTC 1 cut(s) 101
PflMI CCANNNNNTGG 1 cut(s) 172
PkrI GCNGC 1 cut(s) 59
RsaI GTAC 1 cut(s) 239
RsaNI GTAC 1 cut(s) 238
SatI GCNGC 1 cut(s) 58
SetI ASST 3 cut(s) 59, 135, 148
SfcI CTRYAG 1 cut(s) 141
SfuI TTCGAA 1 cut(s) 136
SgeI CNNG 5 cut(s) 52, 92, 118, 179, 207
Sse9I AATT 2 cut(s) 24, 154
SspI AATATT 1 cut(s) 13
StyI CCWWGG 2 cut(s) 105, 166
TaaI ACNGT 1 cut(s) 220
TaqI TCGA 1 cut(s) 136
TasI AATT 2 cut(s) 24, 154
TatI WGTACW 1 cut(s) 237
TfiI GAWTC 1 cut(s) 101
TseI GCWGC 1 cut(s) 57
Van91I CCANNNNNTGG 1 cut(s) 172
XapI RAATTY 2 cut(s) 24, 154
XmnI GAANNNNTTC 1 cut(s) 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.