RLG00000018958

GDSL esterase lipase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
43496215 .. 43497738
1524 bp
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UTR
Exon/CDS
Intron
RLM00000018958

Sequence Viewer

Length: 501 bp
ATGAAGACAGGAACTCACAGCAGCTTTCTATCTCTCTTTCCATCGGTAAGATTAGCTTGGAATAGAGTTACAGATTTGGGCTTGACTTTGGTGTTTATAGCCACGATCTTTTTGGATAAGGTAAGAGCCGAGGCAAAAGATGGTTTCAGACTTTCAGTTTATGTCATGTTGTGTATATTGTGGAATGTTCTTGCTGGACATGGAATTGAGTATGTTAGTTTCAGTAAGGCTTCACTCTTGGAAGGCAAAGAGATGGAGTTTTCAAGTAGTAAACTCTTGGGTTCCTTGAGCTTTCTTGCTCTAGTTTTCACAGTTGTTCTTGGAGACCCTTTAGTTCCAGCTCTTATCATCTTTGGGGACTCTGTAGTCGATGTGGGAAACAATAACAATCTCAACACAGTCATCAAGGCCAACTTCCCTCCCTATGGAAGAGACTTTGTGAATCACAAACCAACTGGAAGATGTTTCTTGAGCTTCAACTTTGGTGGAATCACAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

167

Amino Acids

18.15

Weight (kDa)

8.62

Isoelectric Point (pI)

18.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019806)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 365
AfiI CCNNNNNNNGG 1 cut(s) 425
AgsI TTSAA 2 cut(s) 264, 478
AluBI AGCT 6 cut(s) 24, 56, 291, 341, 474, 497
AluI AGCT 6 cut(s) 24, 56, 291, 341, 474, 497
Alw26I GTCTC 2 cut(s) 318, 426
AoxI GGCC 1 cut(s) 408
ApeKI GCWGC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 11
BbvI GCAGC 1 cut(s) 33
BccI CCATC 3 cut(s) 49, 134, 247
BcoDI GTCTC 2 cut(s) 318, 426
BfaI CTAG 1 cut(s) 302
BfmI CTRYAG 1 cut(s) 363
BisI GCNGC 1 cut(s) 22
BlsI GCNGC 1 cut(s) 23
BmiI GGNNCC 1 cut(s) 283
BpiI GAAGAC 1 cut(s) 11
BpuEI CTTGAG 2 cut(s) 307, 490
BsaI GGTCTC 1 cut(s) 318
BsaJI CCNNGG 1 cut(s) 129
Bsc4I CCNNNNNNNGG 1 cut(s) 425
Bse1I ACTGG 1 cut(s) 460
BseDI CCNNGG 1 cut(s) 129
BseLI CCNNNNNNNGG 1 cut(s) 425
BseNI ACTGG 1 cut(s) 460
BseXI GCAGC 1 cut(s) 33
BshFI GGCC 1 cut(s) 410
BslFI GGGAC 1 cut(s) 371
BslI CCNNNNNNNGG 1 cut(s) 425
BsmAI GTCTC 2 cut(s) 318, 426
BsmFI GGGAC 1 cut(s) 371
BsnI GGCC 1 cut(s) 410
Bso31I GGTCTC 1 cut(s) 318
Bsp143I GATC 1 cut(s) 105
BspANI GGCC 1 cut(s) 410
BspLI GGNNCC 1 cut(s) 283
BspTNI GGTCTC 1 cut(s) 318
BsrI ACTGG 1 cut(s) 460
BssECI CCNNGG 1 cut(s) 129
BssMI GATC 1 cut(s) 105
Bst4CI ACNGT 2 cut(s) 313, 400
Bst6I CTCTTC 1 cut(s) 424
BstKTI GATC 1 cut(s) 108
BstMAI GTCTC 2 cut(s) 318, 426
BstMBI GATC 1 cut(s) 105
BstSFI CTRYAG 1 cut(s) 363
BstV1I GCAGC 1 cut(s) 33
BstV2I GAAGAC 1 cut(s) 11
BsuRI GGCC 1 cut(s) 410
CspCI CAANNNNNGTGG 2 cut(s) 466, 501
CviAII CATG 2 cut(s) 166, 200
DpnI GATC 1 cut(s) 107
DpnII GATC 1 cut(s) 105
DrdI GACNNNNNNGTC 1 cut(s) 365
DseDI GACNNNNNNGTC 1 cut(s) 365
Eam1104I CTCTTC 1 cut(s) 424
EarI CTCTTC 1 cut(s) 424
Eco31I GGTCTC 1 cut(s) 318
FaeI CATG 2 cut(s) 169, 203
FaiI YATR 7 cut(s) 98, 162, 167, 176, 201, 213, 426
FalI AAGNNNNNCTT 4 cut(s) 40, 72, 398, 430
FaqI GGGAC 1 cut(s) 371
FatI CATG 2 cut(s) 165, 199
Fnu4HI GCNGC 1 cut(s) 22
Fsp4HI GCNGC 1 cut(s) 22
FspBI CTAG 1 cut(s) 302
GluI GCNGC 1 cut(s) 22
HaeIII GGCC 1 cut(s) 410
Hin1II CATG 2 cut(s) 169, 203
HinfI GANTC 3 cut(s) 359, 442, 489
Hpy166II GTNNAC 1 cut(s) 272
Hpy188I TCNGA 1 cut(s) 149
Hpy188III TCNNGA 1 cut(s) 469
Hpy8I GTNNAC 1 cut(s) 272
HpyAV CCTTC 1 cut(s) 236
HpyCH4III ACNGT 2 cut(s) 313, 400
Hsp92II CATG 2 cut(s) 169, 203
Kzo9I GATC 1 cut(s) 105
LpnPI CCDG 3 cut(s) 180, 351, 441
Lsp1109I GCAGC 1 cut(s) 33
MaeI CTAG 1 cut(s) 302
MaeIII GTNAC 1 cut(s) 67
MalI GATC 1 cut(s) 107
MboI GATC 1 cut(s) 105
MboII GAAGA 3 cut(s) 16, 441, 471
MluCI AATT 1 cut(s) 204
MlyI GAGTC 1 cut(s) 353
MnlI CCTC 2 cut(s) 124, 429
NdeII GATC 1 cut(s) 105
NlaIII CATG 2 cut(s) 169, 203
NlaIV GGNNCC 1 cut(s) 283
NmeAIII GCCGAG 1 cut(s) 154
PfeI GAWTC 2 cut(s) 442, 489
PkrI GCNGC 1 cut(s) 23
PleI GAGTC 1 cut(s) 353
PpsI GAGTC 1 cut(s) 353
PspN4I GGNNCC 1 cut(s) 283
SatI GCNGC 1 cut(s) 22
Sau3AI GATC 1 cut(s) 105
SchI GAGTC 1 cut(s) 353
SetI ASST 7 cut(s) 26, 58, 123, 293, 343, 476, 499
SfcI CTRYAG 1 cut(s) 363
SmlI CTYRAG 2 cut(s) 286, 469
SmoI CTYRAG 2 cut(s) 286, 469
Sse9I AATT 1 cut(s) 204
SspMI CTAG 1 cut(s) 302
TaaI ACNGT 2 cut(s) 313, 400
TaqI TCGA 1 cut(s) 369
TasI AATT 1 cut(s) 204
TfiI GAWTC 2 cut(s) 442, 489
TseI GCWGC 1 cut(s) 21
TspDTI ATGAA 1 cut(s) 17
XcmI CCANNNNNNNNNTGG 1 cut(s) 109
XspI CTAG 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.