Prupe.1G150500_v2.0.a1

DVL family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
11802242 .. 11802379
138 bp
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UTR
Exon/CDS
Intron
Prupe.1G150500.1

Sequence Viewer

Length: 138 bp
ATGAAAGGACGGATGTCCTCTGTTCTGACGCTGAAGCAGCTGTCGTGGGATAAGTGCTCGAGGCTGATGAGGGAACAGCGGACGCGGCTTTATATCATGTGGAGGTGCACTGTCATACTTCTGTGCTGGGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

46

Amino Acids

5.57

Weight (kDa)

9.74

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63088
fragaria_vesca FvH4_2g23871
prunus_persica Prupe.1G150500_v2.0.a1 Prupe.8G244200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0291491

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 85
AciI CCGC 2 cut(s) 79, 85
AcuI CTGAAG 1 cut(s) 53
AluBI AGCT 1 cut(s) 40
AluI AGCT 1 cut(s) 40
Alw21I GWGCWC 2 cut(s) 59, 110
Alw44I GTGCAC 1 cut(s) 106
Ama87I CYCGRG 1 cut(s) 58
ApaLI GTGCAC 1 cut(s) 106
ApeKI GCWGC 1 cut(s) 37
AvaI CYCGRG 1 cut(s) 58
BaeGI GKGCMC 1 cut(s) 110
Bbv12I GWGCWC 2 cut(s) 59, 110
BbvI GCAGC 1 cut(s) 49
BisI GCNGC 2 cut(s) 38, 86
BlsI GCNGC 2 cut(s) 39, 87
BmeT110I CYCGRG 1 cut(s) 58
BoxI GACNNNNGTC 1 cut(s) 13
BseGI GGATG 2 cut(s) 18, 136
BseSI GKGCMC 1 cut(s) 110
BseXI GCAGC 1 cut(s) 49
BseYI CCCAGC 1 cut(s) 126
Bsh1236I CGCG 1 cut(s) 85
BsiHKAI GWGCWC 2 cut(s) 59, 110
BsiHKCI CYCGRG 1 cut(s) 58
BsoBI CYCGRG 1 cut(s) 58
Bsp1286I GDGCHC 2 cut(s) 59, 110
BspACI CCGC 2 cut(s) 79, 85
BspFNI CGCG 1 cut(s) 85
Bst4CI ACNGT 1 cut(s) 112
BstF5I GGATG 2 cut(s) 18, 136
BstFNI CGCG 1 cut(s) 85
BstMWI GCNNNNNNNGC 2 cut(s) 37, 85
BstPAI GACNNNNGTC 1 cut(s) 13
BstSLI GKGCMC 1 cut(s) 110
BstUI CGCG 1 cut(s) 85
BstV1I GCAGC 1 cut(s) 49
BtsCI GGATG 2 cut(s) 18, 136
BtsIMutI CAGTG 1 cut(s) 108
CseI GACGC 2 cut(s) 37, 91
CviAII CATG 1 cut(s) 97
CviJI RGCY 3 cut(s) 40, 64, 88
CviKI_1 RGCY 3 cut(s) 40, 64, 88
Eco57I CTGAAG 1 cut(s) 53
Eco88I CYCGRG 1 cut(s) 58
FaeI CATG 1 cut(s) 100
FaiI YATR 3 cut(s) 93, 98, 116
FatI CATG 1 cut(s) 96
Fnu4HI GCNGC 2 cut(s) 38, 86
FokI GGATG 1 cut(s) 25
Fsp4HI GCNGC 2 cut(s) 38, 86
GluI GCNGC 2 cut(s) 38, 86
GsaI CCCAGC 1 cut(s) 130
HgaI GACGC 2 cut(s) 37, 91
Hin1II CATG 1 cut(s) 100
Hpy166II GTNNAC 1 cut(s) 108
Hpy188I TCNGA 1 cut(s) 27
Hpy8I GTNNAC 1 cut(s) 108
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4V TGCA 1 cut(s) 108
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 85
Hsp92II CATG 1 cut(s) 100
LpnPI CCDG 1 cut(s) 112
Lsp1109I GCAGC 1 cut(s) 49
MhlI GDGCHC 2 cut(s) 59, 110
MnlI CCTC 4 cut(s) 28, 54, 63, 96
MspA1I CMGCKG 2 cut(s) 40, 79
MvnI CGCG 1 cut(s) 85
MwoI GCNNNNNNNGC 2 cut(s) 37, 85
NlaIII CATG 1 cut(s) 100
PaeR7I CTCGAG 1 cut(s) 58
PkrI GCNGC 2 cut(s) 39, 87
PshAI GACNNNNGTC 1 cut(s) 13
PspFI CCCAGC 1 cut(s) 126
PspXI VCTCGAGB 1 cut(s) 58
PvuII CAGCTG 1 cut(s) 40
SatI GCNGC 2 cut(s) 38, 86
SduI GDGCHC 2 cut(s) 59, 110
SetI ASST 2 cut(s) 42, 107
Sfr274I CTCGAG 1 cut(s) 58
SgeI CNNG 5 cut(s) 57, 70, 72, 96, 109
SlaI CTCGAG 1 cut(s) 58
SmlI CTYRAG 1 cut(s) 58
SmoI CTYRAG 1 cut(s) 58
SsiI CCGC 2 cut(s) 79, 85
TaaI ACNGT 1 cut(s) 112
TaqI TCGA 1 cut(s) 59
TauI GCSGC 1 cut(s) 88
TscAI CASTG 1 cut(s) 115
TseI GCWGC 1 cut(s) 37
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 25
TspRI CASTG 1 cut(s) 115
VneI GTGCAC 1 cut(s) 106
XhoI CTCGAG 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.