Prupe.8G244200_v2.0.a1

DVL family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
21275309 .. 21275785
477 bp
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UTR
Exon/CDS
Intron
Prupe.8G244200.1

Sequence Viewer

Length: 204 bp
ATGGCCCCTCCATGGGGAAGAGTCGATGAGAGGTCCTTATCCAGAGCAGAGGGCATGGGCATGGCAGCCATGGCAATCCCAACAACAAGGAGCAGTTTGAAGCTTCGGCCATGGACACGGTGTTCAAAGCACATAAGAGAGCAGAGGGCACGGCTTTACATCGTATGGAGATGCAGTGTGATGCTTCTGTGCTGGCATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

68

Amino Acids

7.86

Weight (kDa)

10.74

Isoelectric Point (pI)

51.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63088
fragaria_vesca FvH4_2g23871
prunus_persica Prupe.1G150500_v2.0.a1 Prupe.8G244200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0291491

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 107
AfiI CCNNNNNNNGG 3 cut(s) 12, 13, 14
AgsI TTSAA 2 cut(s) 100, 126
AloI GAACNNNNNNTCC 2 cut(s) 106, 138
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
AoxI GGCC 2 cut(s) 3, 107
ApeKI GCWGC 1 cut(s) 65
AspS9I GGNCC 2 cut(s) 4, 33
AvaII GGWCC 1 cut(s) 33
BaeGI GKGCMC 1 cut(s) 151
BbvI GCAGC 1 cut(s) 77
BceAI ACGGC 1 cut(s) 167
BisI GCNGC 1 cut(s) 66
BlsI GCNGC 1 cut(s) 67
Bme18I GGWCC 1 cut(s) 33
BmgT120I GGNCC 2 cut(s) 4, 33
BmiI GGNNCC 1 cut(s) 6
BmsI GCATC 2 cut(s) 161, 171
BsaJI CCNNGG 3 cut(s) 11, 69, 110
BsaXI ACNNNNNCTCC 2 cut(s) 160, 190
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 13, 14
BseDI CCNNGG 3 cut(s) 11, 69, 110
BseLI CCNNNNNNNGG 3 cut(s) 12, 13, 14
BseSI GKGCMC 1 cut(s) 151
BseXI GCAGC 1 cut(s) 77
BshFI GGCC 2 cut(s) 5, 109
BslI CCNNNNNNNGG 3 cut(s) 12, 13, 14
BsnI GGCC 2 cut(s) 5, 109
Bsp1286I GDGCHC 1 cut(s) 151
Bsp19I CCATGG 3 cut(s) 11, 69, 110
BspANI GGCC 2 cut(s) 5, 109
BspLI GGNNCC 1 cut(s) 6
BssECI CCNNGG 3 cut(s) 11, 69, 110
BssT1I CCWWGG 3 cut(s) 11, 69, 110
Bst4CI ACNGT 1 cut(s) 120
Bst6I CTCTTC 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 194
BstDSI CCRYGG 3 cut(s) 11, 69, 110
BstMWI GCNNNNNNNGC 1 cut(s) 71
BstSLI GKGCMC 1 cut(s) 151
BstV1I GCAGC 1 cut(s) 77
BsuRI GGCC 2 cut(s) 5, 109
BtgI CCRYGG 3 cut(s) 11, 69, 110
BtsI GCAGTG 1 cut(s) 181
BtsIMutI CAGTG 1 cut(s) 181
Cac8I GCNNGC 1 cut(s) 194
Cfr13I GGNCC 2 cut(s) 4, 33
CviAII CATG 6 cut(s) 12, 55, 61, 70, 111, 197
CviJI RGCY 5 cut(s) 5, 68, 103, 109, 154
CviKI_1 RGCY 5 cut(s) 5, 68, 103, 109, 154
EaeI YGGCCR 1 cut(s) 107
Eam1104I CTCTTC 1 cut(s) 13
EarI CTCTTC 1 cut(s) 13
Eco130I CCWWGG 3 cut(s) 11, 69, 110
Eco47I GGWCC 1 cut(s) 33
EcoO109I RGGNCCY 1 cut(s) 33
EcoT14I CCWWGG 3 cut(s) 11, 69, 110
ErhI CCWWGG 3 cut(s) 11, 69, 110
FaeI CATG 6 cut(s) 15, 58, 64, 73, 114, 200
FaiI YATR 8 cut(s) 13, 56, 62, 71, 112, 134, 166, 198
FatI CATG 6 cut(s) 11, 54, 60, 69, 110, 196
Fnu4HI GCNGC 1 cut(s) 66
Fsp4HI GCNGC 1 cut(s) 66
GluI GCNGC 1 cut(s) 66
HaeIII GGCC 2 cut(s) 5, 109
Hin1II CATG 6 cut(s) 15, 58, 64, 73, 114, 200
HindIII AAGCTT 1 cut(s) 101
HinfI GANTC 1 cut(s) 21
Hpy188III TCNNGA 1 cut(s) 42
HpyCH4III ACNGT 1 cut(s) 120
HpyCH4V TGCA 1 cut(s) 174
HpyF10VI GCNNNNNNNGC 1 cut(s) 71
Hsp92II CATG 6 cut(s) 15, 58, 64, 73, 114, 200
LmnI GCTCC 1 cut(s) 90
LpnPI CCDG 2 cut(s) 55, 178
Lsp1109I GCAGC 1 cut(s) 77
LweI GCATC 2 cut(s) 161, 171
MboII GAAGA 1 cut(s) 30
MhlI GDGCHC 1 cut(s) 151
MlyI GAGTC 1 cut(s) 30
MnlI CCTC 4 cut(s) 18, 24, 43, 138
MseI TTAA 1 cut(s) 202
MslI CAYNNNNRTG 1 cut(s) 59
MwoI GCNNNNNNNGC 1 cut(s) 71
NcoI CCATGG 3 cut(s) 11, 69, 110
NlaIII CATG 6 cut(s) 15, 58, 64, 73, 114, 200
NlaIV GGNNCC 1 cut(s) 6
PkrI GCNGC 1 cut(s) 67
PleI GAGTC 1 cut(s) 29
PpsI GAGTC 1 cut(s) 29
PpuMI RGGWCCY 1 cut(s) 33
Psp5II RGGWCCY 1 cut(s) 33
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 2 cut(s) 4, 33
PspPPI RGGWCCY 1 cut(s) 33
RseI CAYNNNNRTG 1 cut(s) 59
SaqAI TTAA 1 cut(s) 202
SatI GCNGC 1 cut(s) 66
Sau96I GGNCC 2 cut(s) 4, 33
SchI GAGTC 1 cut(s) 30
SduI GDGCHC 1 cut(s) 151
SetI ASST 2 cut(s) 35, 105
SfaNI GCATC 2 cut(s) 161, 171
SgeI CNNG 9 cut(s) 24, 54, 67, 73, 82, 99, 123, 129, 162
SinI GGWCC 1 cut(s) 33
SmiMI CAYNNNNRTG 1 cut(s) 59
StyI CCWWGG 3 cut(s) 11, 69, 110
TaaI ACNGT 1 cut(s) 120
TaqI TCGA 1 cut(s) 24
Tru1I TTAA 1 cut(s) 202
Tru9I TTAA 1 cut(s) 202
TscAI CASTG 1 cut(s) 181
TseI GCWGC 1 cut(s) 65
TspRI CASTG 1 cut(s) 181
VpaK11BI GGWCC 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.