Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015405

Physical Location & Seq

Genomic Coordinates Reverse (-)

22364876 .. 22368552

Gene Structure 3677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G209900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 624 bp

ATGGCTTTGCAGACCAATAGCAGCAATGCCTTGCTCCCAAAGTGCGTACCCGTTTTCTCTCTGGCCGGTGAGGTCCGGCTCCGGACCCGACTGGTCGGAGATGGAATCTGGGCTCGGAGGAGAGCGGGAGGGGTTTGTATGATCACATGCAAGAGCAGCAGCAGCAGCGATGGCGGCAAGAAGGCAGGGGGAGTGCCCAATTCCAACTATGTGGTGCCGTTAGACAAGTCGTTTTCGTCTTCCAACTCTTCCTGCATCACCCGCCCTCTCGCTGAAATCCTCAGAGACCTCAACAAGAGAATCCCTGATAACATCATCCAAGCACCTCCTCACCATCACTCCACCTTCATCCCCTGGTACCATGCGAACCGGATGTTGAGCTTCTACGCTCCTGGATGGTGTGGAGAAATCCGTGATGTAATATTTTCTGACAATGGAAGTGTGACTGTGGTATACCGTGTCACTATACGTGGATCTGATGGAGAGGCACACCGTGAGTCAACTGGAACAGTATCGCCCAGTGATGGCCGCAATGCCGATCCAGTTACCGCAGCGGAGGAAATAGCTTTCTGCAGAGCATGTGCTCGGTTTGGCCTTGGCCTCTATCTGTATCATGAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

208

Amino Acids

22.49

Weight (kDa)

8.72

Isoelectric Point (pI)

53.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015405)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47870
fragaria_vesca	FvH4_4g21981
prunus_persica	Prupe.1G209900_v2.0.a1 Prupe.1G209900_v2.0.a1 Prupe.1G209900_v2.0.a1
pyrus_communis	pycom16g11550
rosa_chinensis	RchiOBHm_Chr4g0428171
rosa_laevigata	RLG00000007173
rosa_multiflora	Rmu_sc0004940.1_g000007 Rmu_sc0009599.1_g000007
rosa_roxburghii	Rroxscaffold_5G00369900
rosa_rugosa	Rorug04G0223200
rosa_samantha	Rh4AG280500 Rh4BG286000 Rh4DG283000
rosa_wichuraiana	Rw4G024360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	357
AccB1I	GGYRCC	2 cut(s)	214, 357
AccBSI	CCGCTC	1 cut(s)	125
AccI	GTMKAC	1 cut(s)	453
AccIII	TCCGGA	1 cut(s)	81
AciI	CCGC	6 cut(s)	125, 174, 262, 529, 549, 554
AclWI	GGATC	2 cut(s)	481, 533
AcoI	YGGCCR	2 cut(s)	63, 526
AdeI	CACNNNGTG	1 cut(s)	494
AfaI	GTAC	2 cut(s)	48, 359
AfiI	CCNNNNNNNGG	1 cut(s)	524
AjnI	CCWGG	2 cut(s)	353, 391
AluBI	AGCT	2 cut(s)	381, 566
AluI	AGCT	2 cut(s)	381, 566
Alw21I	GWGCWC	1 cut(s)	586
Alw26I	GTCTC	1 cut(s)	279
AlwI	GGATC	2 cut(s)	481, 533
Aor13HI	TCCGGA	1 cut(s)	81
AoxI	GGCC	4 cut(s)	63, 526, 592, 598
ApeKI	GCWGC	6 cut(s)	21, 156, 159, 162, 165, 551
Asp718I	GGTACC	1 cut(s)	357
AspS9I	GGNCC	2 cut(s)	73, 84
AsuHPI	GGTGA	3 cut(s)	80, 250, 323
AvaII	GGWCC	2 cut(s)	73, 84
BaeGI	GKGCMC	1 cut(s)	198
BanI	GGYRCC	2 cut(s)	214, 357
BanII	GRGCYC	1 cut(s)	115
BbsI	GAAGAC	1 cut(s)	231
Bbv12I	GWGCWC	1 cut(s)	586
BbvI	GCAGC	6 cut(s)	33, 168, 171, 174, 177, 563
BccI	CCATC	6 cut(s)	95, 164, 342, 390, 473, 518
BceAI	ACGGC	1 cut(s)	202
BciT130I	CCWGG	2 cut(s)	355, 393
BclI	TGATCA	1 cut(s)	141
BcoDI	GTCTC	1 cut(s)	279
BfmI	CTRYAG	1 cut(s)	571
BisI	GCNGC	8 cut(s)	22, 157, 160, 163, 166, 175, 529, 552
BlsI	GCNGC	8 cut(s)	23, 158, 161, 164, 167, 176, 530, 553
Bme1390I	CCNGG	2 cut(s)	355, 393
Bme18I	GGWCC	2 cut(s)	73, 84
BmgT120I	GGNCC	2 cut(s)	73, 84
BmiI	GGNNCC	4 cut(s)	80, 86, 216, 359
BmrFI	CCNGG	2 cut(s)	355, 393
BmrI	ACTGGG	1 cut(s)	513
BmsI	GCATC	1 cut(s)	264
BmuI	ACTGGG	1 cut(s)	513
BpiI	GAAGAC	1 cut(s)	231
BsaAI	YACGTR	1 cut(s)	470
BsaI	GGTCTC	1 cut(s)	279
BsaJI	CCNNGG	2 cut(s)	353, 595
BsaWI	WCCGGW	2 cut(s)	81, 369
BsaXI	ACNNNNNCTCC	2 cut(s)	323, 353
Bsc4I	CCNNNNNNNGG	1 cut(s)	524
Bse118I	RCCGGY	1 cut(s)	65
Bse1I	ACTGG	4 cut(s)	96, 508, 519, 542
Bse3DI	GCAATG	2 cut(s)	31, 538
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	2 cut(s)	355, 393
BseDI	CCNNGG	2 cut(s)	353, 595
BseGI	GGATG	4 cut(s)	315, 348, 378, 401
BseLI	CCNNNNNNNGG	1 cut(s)	524
BseMI	GCAATG	2 cut(s)	31, 538
BseMII	CTCAG	1 cut(s)	295
BseNI	ACTGG	4 cut(s)	96, 508, 519, 542
BseRI	GAGGAG	2 cut(s)	133, 318
BseSI	GKGCMC	1 cut(s)	198
BseXI	GCAGC	6 cut(s)	33, 168, 171, 174, 177, 563
BshFI	GGCC	4 cut(s)	65, 528, 594, 600
BshNI	GGYRCC	2 cut(s)	214, 357
BsiHKAI	GWGCWC	1 cut(s)	586
BsiSI	CCGG	4 cut(s)	66, 76, 82, 370
BslI	CCNNNNNNNGG	1 cut(s)	524
BsmAI	GTCTC	1 cut(s)	279
BsnI	GGCC	4 cut(s)	65, 528, 594, 600
Bso31I	GGTCTC	1 cut(s)	279
Bsp1286I	GDGCHC	3 cut(s)	115, 198, 586
Bsp13I	TCCGGA	1 cut(s)	81
Bsp143I	GATC	3 cut(s)	141, 473, 538
BspACI	CCGC	6 cut(s)	125, 174, 262, 529, 549, 554
BspANI	GGCC	4 cut(s)	65, 528, 594, 600
BspCNI	CTCAG	1 cut(s)	294
BspEI	TCCGGA	1 cut(s)	81
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	4 cut(s)	80, 86, 216, 359
BspMAI	CTGCAG	1 cut(s)	575
BspPI	GGATC	2 cut(s)	481, 533
BspT107I	GGYRCC	2 cut(s)	214, 357
BspTNI	GGTCTC	1 cut(s)	279
BsrBI	CCGCTC	1 cut(s)	125
BsrDI	GCAATG	2 cut(s)	31, 538
BsrFI	RCCGGY	1 cut(s)	65
BsrI	ACTGG	4 cut(s)	96, 508, 519, 542
BssAI	RCCGGY	1 cut(s)	65
BssECI	CCNNGG	2 cut(s)	353, 595
BssMI	GATC	3 cut(s)	141, 473, 538
BssNAI	GTATAC	1 cut(s)	454
BssT1I	CCWWGG	1 cut(s)	595
Bst1107I	GTATAC	1 cut(s)	454
Bst2UI	CCWGG	2 cut(s)	355, 393
Bst4CI	ACNGT	4 cut(s)	448, 458, 494, 511
Bst6I	CTCTTC	1 cut(s)	253
BstBAI	YACGTR	1 cut(s)	470
BstDEI	CTNAG	1 cut(s)	281
BstF5I	GGATG	4 cut(s)	315, 348, 378, 401
BstKTI	GATC	3 cut(s)	144, 476, 541
BstMAI	GTCTC	1 cut(s)	279
BstMBI	GATC	3 cut(s)	141, 473, 538
BstMWI	GCNNNNNNNGC	6 cut(s)	156, 162, 165, 171, 174, 261
BstNI	CCWGG	2 cut(s)	355, 393
BstNSI	RCATGY	2 cut(s)	150, 582
BstSCI	CCNGG	2 cut(s)	353, 391
BstSFI	CTRYAG	1 cut(s)	571
BstSLI	GKGCMC	1 cut(s)	198
BstV1I	GCAGC	6 cut(s)	33, 168, 171, 174, 177, 563
BstV2I	GAAGAC	1 cut(s)	231
BstX2I	RGATCY	1 cut(s)	473
BstXI	CCANNNNNNTGG	1 cut(s)	211
BstYI	RGATCY	1 cut(s)	473
BstZ17I	GTATAC	1 cut(s)	454
BsuRI	GGCC	4 cut(s)	65, 528, 594, 600
BtgZI	GCGATG	1 cut(s)	183
BtsCI	GGATG	4 cut(s)	315, 348, 378, 401
BtsIMutI	CAGTG	1 cut(s)	526
CciI	TCATGA	1 cut(s)	613
Cfr10I	RCCGGY	1 cut(s)	65
Cfr13I	GGNCC	2 cut(s)	73, 84
Csp6I	GTAC	2 cut(s)	47, 358
CviAII	CATG	4 cut(s)	147, 362, 579, 614
CviJI	RGCY	9 cut(s)	5, 65, 79, 113, 381, 528, 566, 594, 600
CviKI_1	RGCY	9 cut(s)	5, 65, 79, 113, 381, 528, 566, 594, 600
CviQI	GTAC	2 cut(s)	47, 358
DdeI	CTNAG	1 cut(s)	281
DpnI	GATC	3 cut(s)	143, 475, 540
DpnII	GATC	3 cut(s)	141, 473, 538
DraIII	CACNNNGTG	1 cut(s)	494
EaeI	YGGCCR	2 cut(s)	63, 526
Eam1104I	CTCTTC	1 cut(s)	253
EarI	CTCTTC	1 cut(s)	253
Eco130I	CCWWGG	1 cut(s)	595
Eco24I	GRGCYC	1 cut(s)	115
Eco31I	GGTCTC	1 cut(s)	279
Eco47I	GGWCC	2 cut(s)	73, 84
EcoRII	CCWGG	2 cut(s)	353, 391
EcoT14I	CCWWGG	1 cut(s)	595
EcoT38I	GRGCYC	1 cut(s)	115
ErhI	CCWWGG	1 cut(s)	595
FaeI	CATG	4 cut(s)	150, 365, 582, 617
FaiI	YATR	8 cut(s)	140, 148, 210, 363, 454, 467, 580, 615
FatI	CATG	4 cut(s)	146, 361, 578, 613
FauI	CCCGC	2 cut(s)	118, 269
FbaI	TGATCA	1 cut(s)	141
FblI	GTMKAC	1 cut(s)	453
Fnu4HI	GCNGC	8 cut(s)	22, 157, 160, 163, 166, 175, 529, 552
FokI	GGATG	4 cut(s)	302, 335, 385, 408
FriOI	GRGCYC	1 cut(s)	115
Fsp4HI	GCNGC	8 cut(s)	22, 157, 160, 163, 166, 175, 529, 552
GluI	GCNGC	8 cut(s)	22, 157, 160, 163, 166, 175, 529, 552
HaeIII	GGCC	4 cut(s)	65, 528, 594, 600
HapII	CCGG	4 cut(s)	66, 76, 82, 370
Hin1II	CATG	4 cut(s)	150, 365, 582, 617
HincII	GTYRAC	1 cut(s)	501
HindII	GTYRAC	1 cut(s)	501
HinfI	GANTC	3 cut(s)	105, 300, 497
HpaII	CCGG	4 cut(s)	66, 76, 82, 370
HphI	GGTGA	3 cut(s)	80, 250, 323
Hpy166II	GTNNAC	2 cut(s)	454, 501
Hpy188I	TCNGA	5 cut(s)	98, 117, 284, 430, 478
Hpy188III	TCNNGA	2 cut(s)	82, 614
Hpy8I	GTNNAC	2 cut(s)	454, 501
HpyAV	CCTTC	2 cut(s)	175, 355
HpyCH4III	ACNGT	4 cut(s)	448, 458, 494, 511
HpyCH4IV	ACGT	1 cut(s)	469
HpyCH4V	TGCA	4 cut(s)	10, 150, 255, 573
HpyF10VI	GCNNNNNNNGC	6 cut(s)	156, 162, 165, 171, 174, 261
HpyF3I	CTNAG	1 cut(s)	281
HpySE526I	ACGT	1 cut(s)	469
Hsp92II	CATG	4 cut(s)	150, 365, 582, 617
Kpn2I	TCCGGA	1 cut(s)	81
KpnI	GGTACC	1 cut(s)	361
Ksp22I	TGATCA	1 cut(s)	141
Kzo9I	GATC	3 cut(s)	141, 473, 538
LmnI	GCTCC	3 cut(s)	39, 84, 394
Lsp1109I	GCAGC	6 cut(s)	33, 168, 171, 174, 177, 563
LweI	GCATC	1 cut(s)	264
MaeII	ACGT	1 cut(s)	469
MaeIII	GTNAC	3 cut(s)	442, 460, 544
MalI	GATC	3 cut(s)	143, 475, 540
MbiI	CCGCTC	1 cut(s)	125
MboI	GATC	3 cut(s)	141, 473, 538
MboII	GAAGA	2 cut(s)	231, 240
MflI	RGATCY	1 cut(s)	473
MhlI	GDGCHC	3 cut(s)	115, 198, 586
MluCI	AATT	1 cut(s)	199
MlyI	GAGTC	1 cut(s)	506
MmeI	TCCRAC	3 cut(s)	76, 228, 267
MroI	TCCGGA	1 cut(s)	81
MspA1I	CMGCKG	1 cut(s)	554
MspI	CCGG	4 cut(s)	66, 76, 82, 370
MspR9I	CCNGG	2 cut(s)	355, 393
MvaI	CCWGG	2 cut(s)	355, 393
MwoI	GCNNNNNNNGC	6 cut(s)	156, 162, 165, 171, 174, 261
NdeII	GATC	3 cut(s)	141, 473, 538
NlaIII	CATG	4 cut(s)	150, 365, 582, 617
NlaIV	GGNNCC	4 cut(s)	80, 86, 216, 359
NmuCI	GTSAC	2 cut(s)	442, 460
NspI	RCATGY	2 cut(s)	150, 582
PagI	TCATGA	1 cut(s)	613
PfeI	GAWTC	2 cut(s)	105, 300
PfoI	TCCNGGA	1 cut(s)	391
PkrI	GCNGC	8 cut(s)	23, 158, 161, 164, 167, 176, 530, 553
PleI	GAGTC	1 cut(s)	505
PpsI	GAGTC	1 cut(s)	505
Ppu21I	YACGTR	1 cut(s)	470
Psp6I	CCWGG	2 cut(s)	353, 391
PspGI	CCWGG	2 cut(s)	353, 391
PspN4I	GGNNCC	4 cut(s)	80, 86, 216, 359
PspPI	GGNCC	2 cut(s)	73, 84
PstI	CTGCAG	1 cut(s)	575
PsuI	RGATCY	1 cut(s)	473
RsaI	GTAC	2 cut(s)	48, 359
RsaNI	GTAC	2 cut(s)	47, 358
SatI	GCNGC	8 cut(s)	22, 157, 160, 163, 166, 175, 529, 552
Sau3AI	GATC	3 cut(s)	141, 473, 538
Sau96I	GGNCC	2 cut(s)	73, 84
SchI	GAGTC	1 cut(s)	506
ScrFI	CCNGG	2 cut(s)	355, 393
SduI	GDGCHC	3 cut(s)	115, 198, 586
SetI	ASST	7 cut(s)	75, 291, 328, 347, 383, 472, 568
SfaNI	GCATC	1 cut(s)	264
SfcI	CTRYAG	1 cut(s)	571
SinI	GGWCC	2 cut(s)	73, 84
Sse9I	AATT	1 cut(s)	199
SsiI	CCGC	6 cut(s)	125, 174, 262, 529, 549, 554
SspI	AATATT	1 cut(s)	423
StyD4I	CCNGG	2 cut(s)	353, 391
StyI	CCWWGG	1 cut(s)	595
TaaI	ACNGT	4 cut(s)	448, 458, 494, 511
TaiI	ACGT	1 cut(s)	472
TasI	AATT	1 cut(s)	199
TauI	GCSGC	2 cut(s)	177, 531
TfiI	GAWTC	2 cut(s)	105, 300
TscAI	CASTG	1 cut(s)	526
TseFI	GTSAC	2 cut(s)	442, 460
TseI	GCWGC	6 cut(s)	21, 156, 159, 162, 165, 551
Tsp45I	GTSAC	2 cut(s)	442, 460
TspDTI	ATGAA	1 cut(s)	337
TspGWI	ACGGA	1 cut(s)	401
TspRI	CASTG	1 cut(s)	526
VpaK11BI	GGWCC	2 cut(s)	73, 84
XceI	RCATGY	2 cut(s)	150, 582
XmiI	GTMKAC	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.