Prupe.1G327100_v2.0.a1

DYW family of nucleic acid deaminases

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
31092407 .. 31095629
3223 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G327100.1

Sequence Viewer

Length: 1893 bp
ATGAGAAGAGTGATGCAAATACCATGGAGCTCCAGAAGAAGCCATTGCATGATGGGCATGACCAAGCTTTGGTTCAGTCTCTCACTTCAACCACTTGCCTCAATTCTCCAATTTTCTTCTCTCACCCAAACCCAAAACCCCTCCAATCCACCAATTGCTCTGACCAAGCAAGTCTTCACCACCCTCTTACAATCATGCTCTTCCTACCCAAACCACCTCAAGCAAATTCATGCCCTCATCCTCACCACAGGCCTCTCTATCAAGAACAGCCTCACCACCCAACTTCTCACCAATCTCACACTTTTAAGGGACATGTCCTATGCCCGCCAATTATTCGACCAAATGCACAAGCCACGCGTTTTTCTATGGAACACCCTTATCAAAGCCTATGTGAAAAATGGTATTTTTACGGAGGCGGCTTTTGTTTATAGACAAATGCACCTTCTGGGTGTTCGTCCTGACCAGTTTACTTACACGTTTGTGGTCAAGGCATGTGCTGAACTGCCCGAATTATGGGCTGGATCAGCTGTCCTTGCCCATGTGGTGAAATATGGGTTGGAATTCGTTGCTATGGTGAGGACTGAGCTGATACTAATGTTTGCGAAATTCGGAGAATTGGGTATGGCGGATTTTCTATTTGAAACTATGGTTGAGAGGGATTTGATTGCTTGGAATGCTTTCATTGCGGCTTGTGTACAAAATGGCAATGCTGGTAAGGCTCTTGCATTGTTTCGCCAGATGGATGTAGCTGGAATTAAGCATGATGCTGTTAGTGTTGTGAGTGCCTTTTCAGCTTGTGGTCAATTAGGGTGTTTGGAGAATGGGCAAGAAATCTATGGGATCATGAGAAAATATGGGATTGTTTGCAATATAATTGTTGCCAATGCACAGCTTGATATGTATGTGAAATGTGGTAGCATAGACATGGCTGAGGCGTTGTTTGAGGATATGCCTCAGAGAAATGTTATTTCCTGGAGCACTATGATAATAGGGTATTCCATAAATGGGGAGAGTGAAAAGGCATTGAATATGTTTTCGAGGATGCAAAAACATGGAGTGCAACCAAACCATGTCACTTATCTTGGAGTTTTGTGTGCATGTAGCCATGCTGGGCTTGTAAATGAAGGCAAAGCTTATTTTAGTCACATGGTCCAATCTGGTAACAAGAATATTCGACCAAAAATAGAGCACTATGCATGTATGGTTGACCTTCTAGGCCGGTCAGGACATCTTGAGGAGGCCTATAATTTCATAAGAAGTATGCCAATTGAACCGGATTCTGGGGTGTGGGGAGCTTTATTGGGTGCCTGTACAATCCACCAAAATGTTGAACTGGGCCAGCATGCAGCTGATTTACTTTTTGAAGAAGCTCCAGATATTGGTTCATATCATGTCTTAATGTCAAACATATATGCGGCTGCTGGAAGATGGGATTTTGTTGATAAGGTGAGGCTCAGAATGAGAAAAAGAGGTGTTAAGAAAATAGCTGCCTACAGCTCCGTTGAATGTAATGGGAAATTCCACATTTTCTATGGTGGAGACAGATTGCACCCAGAGTCATCAGAAATATATGAGAAGTTGGAGGACTTATTGAGAGAAGTGAAGAGTATAGGTTACATTCCAAATACCAGCTCCGTGTTTCATGATGTAGACATGGAGGAAAAGGAAGCCACACTGAACAGTCACAGTGAAAAGCTTGCCGTTGCATTTAGTCTTATAAATTTGAGGCCTGAATGCCCAATTAGGGTGGTGAAGAATCTGAGGATTTGTGACGACTGCCATAGTTTCTGTAAATTTGTATCTAAAACTACCAAAAGGGAGATTGTCATGAGAGATAAAATCCGTTTTCATCATTTTAGAAATGGTGATTGTTCATGCAACAACTTTTGGTGA

Protein Analysis

631

Amino Acids

71.13

Weight (kDa)

8.49

Isoelectric Point (pI)

47.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1718
AccB1I GGYRCC 1 cut(s) 1304
AccB7I CCANNNNNTGG 2 cut(s) 69, 1379
AccI GTMKAC 1 cut(s) 1650
AccII CGCG 1 cut(s) 357
AciI CCGC 5 cut(s) 325, 416, 626, 686, 1415
AclWI GGATC 2 cut(s) 529, 848
AcsI RAATTY 6 cut(s) 225, 560, 605, 1517, 1720, 1793
AfaI GTAC 2 cut(s) 696, 1312
AfiI CCNNNNNNNGG 6 cut(s) 69, 513, 1005, 1280, 1379, 1744
AflIII ACRYGT 3 cut(s) 312, 355, 474
AgsI TTSAA 7 cut(s) 89, 641, 1027, 1271, 1331, 1364, 1505
AjnI CCWGG 1 cut(s) 971
AjuI GAANNNNNNNTTGG 6 cut(s) 56, 88, 158, 190, 539, 571
AleI CACNNNNGTG 1 cut(s) 479
Alw21I GWGCWC 3 cut(s) 32, 980, 1191
Alw26I GTCTC 2 cut(s) 83, 1533
AlwI GGATC 2 cut(s) 529, 848
AoxI GGCC 5 cut(s) 250, 1216, 1239, 1336, 1727
ApeKI GCWGC 3 cut(s) 1346, 1418, 1487
ApoI RAATTY 6 cut(s) 225, 560, 605, 1517, 1720, 1793
Asp700I GAANNNNTTC 1 cut(s) 677
AspS9I GGNCC 2 cut(s) 1150, 1336
AvaII GGWCC 1 cut(s) 1150
BaeI ACNNNNGTAYC 2 cut(s) 581, 614
BanI GGYRCC 1 cut(s) 1304
BanII GRGCYC 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 166
Bbv12I GWGCWC 3 cut(s) 32, 980, 1191
BbvCI CCTCAGC 1 cut(s) 930
BbvI GCAGC 3 cut(s) 1358, 1405, 1474
BccI CCATC 3 cut(s) 46, 733, 1422
BceAI ACGGC 1 cut(s) 1685
BciT130I CCWGG 1 cut(s) 973
BcoDI GTCTC 2 cut(s) 83, 1533
BfaI CTAG 1 cut(s) 1214
BfmI CTRYAG 1 cut(s) 1492
BisI GCNGC 6 cut(s) 417, 687, 1347, 1416, 1419, 1488
BlsI GCNGC 6 cut(s) 418, 688, 1348, 1417, 1420, 1489
Bme1390I CCNGG 1 cut(s) 973
Bme18I GGWCC 1 cut(s) 1150
BmgT120I GGNCC 2 cut(s) 1150, 1336
BmiI GGNNCC 1 cut(s) 1306
BmrFI CCNGG 1 cut(s) 973
BmrI ACTGGG 1 cut(s) 1343
BmsI GCATC 3 cut(s) 3, 754, 1032
BmuI ACTGGG 1 cut(s) 1343
BpiI GAAGAC 1 cut(s) 166
BpmI CTGGAG 3 cut(s) 16, 994, 1356
Bpu10I CCTNAGC 1 cut(s) 930
BpuEI CTTGAG 2 cut(s) 203, 1253
BsaJI CCNNGG 1 cut(s) 23
BsaWI WCCGGW 1 cut(s) 1273
Bsc4I CCNNNNNNNGG 6 cut(s) 69, 513, 1005, 1280, 1379, 1744
Bse118I RCCGGY 1 cut(s) 1218
Bse1I ACTGG 2 cut(s) 463, 1338
Bse3DI GCAATG 3 cut(s) 43, 681, 712
BseBI CCWGG 1 cut(s) 973
BseDI CCNNGG 1 cut(s) 23
BseGI GGATG 3 cut(s) 237, 748, 1047
BseLI CCNNNNNNNGG 6 cut(s) 69, 513, 1005, 1280, 1379, 1744
BseMI GCAATG 3 cut(s) 43, 681, 712
BseMII CTCAG 5 cut(s) 573, 921, 968, 1468, 1751
BseNI ACTGG 2 cut(s) 463, 1338
BseRI GAGGAG 1 cut(s) 1250
BseXI GCAGC 3 cut(s) 1358, 1405, 1474
BseYI CCCAGC 1 cut(s) 1109
Bsh1236I CGCG 1 cut(s) 357
BshFI GGCC 5 cut(s) 252, 1218, 1241, 1338, 1729
BshNI GGYRCC 1 cut(s) 1304
BsiHKAI GWGCWC 3 cut(s) 32, 980, 1191
BsiSI CCGG 2 cut(s) 1219, 1274
BslFI GGGAC 1 cut(s) 323
BslI CCNNNNNNNGG 6 cut(s) 69, 513, 1005, 1280, 1379, 1744
BsmAI GTCTC 2 cut(s) 83, 1533
BsmFI GGGAC 1 cut(s) 323
BsmI GAATGC 2 cut(s) 679, 1739
BsnI GGCC 5 cut(s) 252, 1218, 1241, 1338, 1729
Bsp1286I GDGCHC 3 cut(s) 32, 980, 1191
Bsp1407I TGTACA 2 cut(s) 694, 1310
Bsp143I GATC 2 cut(s) 521, 840
Bsp19I CCATGG 1 cut(s) 23
BspACI CCGC 5 cut(s) 325, 416, 626, 686, 1415
BspANI GGCC 5 cut(s) 252, 1218, 1241, 1338, 1729
BspCNI CTCAG 5 cut(s) 574, 922, 967, 1467, 1752
BspFNI CGCG 1 cut(s) 357
BspHI TCATGA 3 cut(s) 843, 1642, 1827
BspLI GGNNCC 1 cut(s) 1306
BspPI GGATC 2 cut(s) 529, 848
BspQI GCTCTTC 1 cut(s) 205
BspT107I GGYRCC 1 cut(s) 1304
BsrDI GCAATG 3 cut(s) 43, 681, 712
BsrFI RCCGGY 1 cut(s) 1218
BsrGI TGTACA 2 cut(s) 694, 1310
BsrI ACTGG 2 cut(s) 463, 1338
BssAI RCCGGY 1 cut(s) 1218
BssECI CCNNGG 1 cut(s) 23
BssMI GATC 2 cut(s) 521, 840
BssT1I CCWWGG 1 cut(s) 23
Bst2UI CCWGG 1 cut(s) 973
Bst4CI ACNGT 2 cut(s) 1682, 1688
Bst6I CTCTTC 2 cut(s) 205, 1598
BstAUI TGTACA 2 cut(s) 694, 1310
BstC8I GCNNGC 4 cut(s) 325, 1340, 1344, 1698
BstDEI CTNAG 5 cut(s) 582, 930, 954, 1454, 1760
BstDSI CCRYGG 1 cut(s) 23
BstF5I GGATG 3 cut(s) 237, 748, 1047
BstFNI CGCG 1 cut(s) 357
BstKTI GATC 2 cut(s) 524, 843
BstMAI GTCTC 2 cut(s) 83, 1533
BstMBI GATC 2 cut(s) 521, 840
BstMWI GCNNNNNNNGC 7 cut(s) 54, 524, 533, 674, 683, 716, 791
BstNI CCWGG 1 cut(s) 973
BstNSI RCATGY 5 cut(s) 316, 495, 1101, 1200, 1346
BstSCI CCNGG 1 cut(s) 971
BstSFI CTRYAG 1 cut(s) 1492
BstUI CGCG 1 cut(s) 357
BstV1I GCAGC 3 cut(s) 1358, 1405, 1474
BstV2I GAAGAC 1 cut(s) 166
BsuRI GGCC 5 cut(s) 252, 1218, 1241, 1338, 1729
BtgI CCRYGG 1 cut(s) 23
BtsCI GGATG 3 cut(s) 237, 748, 1047
BtsIMutI CAGTG 2 cut(s) 1673, 1693
Cac8I GCNNGC 4 cut(s) 325, 1340, 1344, 1698
CciI TCATGA 3 cut(s) 843, 1642, 1827
Cfr10I RCCGGY 1 cut(s) 1218
Cfr13I GGNCC 2 cut(s) 1150, 1336
Csp6I GTAC 2 cut(s) 695, 1311
CspCI CAANNNNNGTGG 2 cut(s) 1728, 1763
CviQI GTAC 2 cut(s) 695, 1311
DdeI CTNAG 5 cut(s) 582, 930, 954, 1454, 1760
DpnI GATC 2 cut(s) 523, 842
DpnII GATC 2 cut(s) 521, 840
Eam1104I CTCTTC 2 cut(s) 205, 1598
EarI CTCTTC 2 cut(s) 205, 1598
EciI GGCGGA 1 cut(s) 641
Ecl136II GAGCTC 1 cut(s) 30
Eco130I CCWWGG 1 cut(s) 23
Eco147I AGGCCT 3 cut(s) 252, 1241, 1729
Eco24I GRGCYC 1 cut(s) 32
Eco47I GGWCC 1 cut(s) 1150
Eco53kI GAGCTC 1 cut(s) 30
EcoICRI GAGCTC 1 cut(s) 30
EcoRI GAATTC 1 cut(s) 560
EcoRII CCWGG 1 cut(s) 971
EcoT14I CCWWGG 1 cut(s) 23
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 1 cut(s) 32
ErhI CCWWGG 1 cut(s) 23
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FaqI GGGAC 1 cut(s) 323
FauI CCCGC 1 cut(s) 332
FblI GTMKAC 1 cut(s) 1650
Fnu4HI GCNGC 6 cut(s) 417, 687, 1347, 1416, 1419, 1488
FokI GGATG 3 cut(s) 224, 755, 1054
FriOI GRGCYC 1 cut(s) 32
Fsp4HI GCNGC 6 cut(s) 417, 687, 1347, 1416, 1419, 1488
FspBI CTAG 1 cut(s) 1214
GluI GCNGC 6 cut(s) 417, 687, 1347, 1416, 1419, 1488
GsaI CCCAGC 1 cut(s) 1113
GsuI CTGGAG 3 cut(s) 16, 994, 1356
HaeIII GGCC 5 cut(s) 252, 1218, 1241, 1338, 1729
HapII CCGG 2 cut(s) 1219, 1274
HincII GTYRAC 1 cut(s) 1207
HindII GTYRAC 1 cut(s) 1207
HindIII AAGCTT 3 cut(s) 65, 1131, 1694
HinfI GANTC 3 cut(s) 1277, 1556, 1756
HpaII CCGG 2 cut(s) 1219, 1274
Hpy166II GTNNAC 4 cut(s) 468, 695, 1207, 1651
Hpy188I TCNGA 6 cut(s) 162, 611, 957, 1457, 1564, 1761
Hpy188III TCNNGA 9 cut(s) 33, 262, 458, 844, 1224, 1232, 1373, 1643, 1828
Hpy8I GTNNAC 4 cut(s) 468, 695, 1207, 1651
HpyAV CCTTC 3 cut(s) 452, 1118, 1220
HpyCH4III ACNGT 2 cut(s) 1682, 1688
HpyCH4IV ACGT 1 cut(s) 476
HpyF10VI GCNNNNNNNGC 7 cut(s) 54, 524, 533, 674, 683, 716, 791
HpyF3I CTNAG 5 cut(s) 582, 930, 954, 1454, 1760
HpySE526I ACGT 1 cut(s) 476
Kzo9I GATC 2 cut(s) 521, 840
LguI GCTCTTC 1 cut(s) 205
LmnI GCTCC 7 cut(s) 27, 35, 975, 1292, 1375, 1502, 1637
Lsp1109I GCAGC 3 cut(s) 1358, 1405, 1474
LweI GCATC 3 cut(s) 3, 754, 1032
MaeI CTAG 1 cut(s) 1214
MaeII ACGT 1 cut(s) 476
MaeIII GTNAC 6 cut(s) 1072, 1142, 1160, 1613, 1682, 1769
MalI GATC 2 cut(s) 523, 842
MboI GATC 2 cut(s) 521, 840
MboII GAAGA 9 cut(s) 18, 48, 108, 166, 192, 1376, 1437, 1615, 1765
MfeI CAATTG 2 cut(s) 153, 1266
MhlI GDGCHC 3 cut(s) 32, 980, 1191
MluI ACGCGT 1 cut(s) 355
MlyI GAGTC 1 cut(s) 1565
MmeI TCCRAC 2 cut(s) 537, 1560
Mph1103I ATGCAT 1 cut(s) 1198
MroXI GAANNNNTTC 1 cut(s) 677
MseI TTAA 4 cut(s) 305, 756, 1397, 1476
MslI CAYNNNNRTG 3 cut(s) 479, 923, 1323
MspA1I CMGCKG 2 cut(s) 527, 1349
MspI CCGG 2 cut(s) 1219, 1274
MspR9I CCNGG 1 cut(s) 973
MunI CAATTG 2 cut(s) 153, 1266
Mva1269I GAATGC 2 cut(s) 679, 1739
MvaI CCWGG 1 cut(s) 973
MvnI CGCG 1 cut(s) 357
MwoI GCNNNNNNNGC 7 cut(s) 54, 524, 533, 674, 683, 716, 791
NcoI CCATGG 1 cut(s) 23
NdeII GATC 2 cut(s) 521, 840
NlaIV GGNNCC 1 cut(s) 1306
NmuCI GTSAC 4 cut(s) 1072, 1142, 1682, 1769
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 5 cut(s) 316, 495, 1101, 1200, 1346
OliI CACNNNNGTG 1 cut(s) 479
PaeI GCATGC 1 cut(s) 1346
PagI TCATGA 3 cut(s) 843, 1642, 1827
PceI AGGCCT 3 cut(s) 252, 1241, 1729
PciI ACATGT 1 cut(s) 312
PciSI GCTCTTC 1 cut(s) 205
PctI GAATGC 2 cut(s) 679, 1739
PdmI GAANNNNTTC 1 cut(s) 677
PfeI GAWTC 2 cut(s) 1277, 1756
PflMI CCANNNNNTGG 2 cut(s) 69, 1379
PfoI TCCNGGA 1 cut(s) 971
PkrI GCNGC 6 cut(s) 418, 688, 1348, 1417, 1420, 1489
PleI GAGTC 1 cut(s) 1564
PpsI GAGTC 1 cut(s) 1564
PscI ACATGT 1 cut(s) 312
PsiI TTATAA 1 cut(s) 1718
Psp124BI GAGCTC 1 cut(s) 32
Psp6I CCWGG 1 cut(s) 971
PspFI CCCAGC 1 cut(s) 1109
PspGI CCWGG 1 cut(s) 971
PspN4I GGNNCC 1 cut(s) 1306
PspPI GGNCC 2 cut(s) 1150, 1336
PvuII CAGCTG 2 cut(s) 527, 1349
RsaI GTAC 2 cut(s) 696, 1312
RsaNI GTAC 2 cut(s) 695, 1311
RseI CAYNNNNRTG 3 cut(s) 479, 923, 1323
SacI GAGCTC 1 cut(s) 32
SapI GCTCTTC 1 cut(s) 205
SaqAI TTAA 4 cut(s) 305, 756, 1397, 1476
SatI GCNGC 6 cut(s) 417, 687, 1347, 1416, 1419, 1488
Sau3AI GATC 2 cut(s) 521, 840
Sau96I GGNCC 2 cut(s) 1150, 1336
SchI GAGTC 1 cut(s) 1565
ScrFI CCNGG 1 cut(s) 973
SduI GDGCHC 3 cut(s) 32, 980, 1191
SfaNI GCATC 3 cut(s) 3, 754, 1032
SfcI CTRYAG 1 cut(s) 1492
SinI GGWCC 1 cut(s) 1150
SmiMI CAYNNNNRTG 3 cut(s) 479, 923, 1323
SmlI CTYRAG 2 cut(s) 218, 1232
SmoI CTYRAG 2 cut(s) 218, 1232
SphI GCATGC 1 cut(s) 1346
SseBI AGGCCT 3 cut(s) 252, 1241, 1729
SsiI CCGC 5 cut(s) 325, 416, 626, 686, 1415
SspI AATATT 1 cut(s) 1171
SspMI CTAG 1 cut(s) 1214
SstI GAGCTC 1 cut(s) 32
StuI AGGCCT 3 cut(s) 252, 1241, 1729
StyD4I CCNGG 1 cut(s) 971
StyI CCWWGG 1 cut(s) 23
TaaI ACNGT 2 cut(s) 1682, 1688
TaiI ACGT 1 cut(s) 479
TaqI TCGA 3 cut(s) 336, 1037, 1174
TatI WGTACW 2 cut(s) 694, 1310
TauI GCSGC 3 cut(s) 419, 689, 1418
TfiI GAWTC 2 cut(s) 1277, 1756
Tru1I TTAA 4 cut(s) 305, 756, 1397, 1476
Tru9I TTAA 4 cut(s) 305, 756, 1397, 1476
TscAI CASTG 2 cut(s) 1680, 1693
TseFI GTSAC 4 cut(s) 1072, 1142, 1682, 1769
TseI GCWGC 3 cut(s) 1346, 1418, 1487
Tsp45I GTSAC 4 cut(s) 1072, 1142, 1682, 1769
TspDTI ATGAA 8 cut(s) 218, 670, 1137, 1240, 1374, 1631, 1838, 1863
TspGWI ACGGA 4 cut(s) 425, 1489, 1624, 1832
TspRI CASTG 2 cut(s) 1680, 1693
Van91I CCANNNNNTGG 2 cut(s) 69, 1379
VpaK11BI GGWCC 1 cut(s) 1150
XapI RAATTY 6 cut(s) 225, 560, 605, 1517, 1720, 1793
XceI RCATGY 5 cut(s) 316, 495, 1101, 1200, 1346
XcmI CCANNNNNNNNNTGG 1 cut(s) 1529
XmiI GTMKAC 1 cut(s) 1650
XmnI GAANNNNTTC 1 cut(s) 677
XspI CTAG 1 cut(s) 1214
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.