Prupe.1G355300_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0016175
Physical Location & Seq
Forward (+)
32984380 .. 32985411
1032 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G355300.1

Sequence Viewer

Length: 1032 bp
ATGGCAGGCGTTTTCCGGCGGTCGCTTTCTTTCCCCAACAAAATCATTCCAAATAGCCGTCAGGCAAAAGTGCGAGCACCCAAGTTGTCTCATCACACCAGATCCATCAGTCTCCCAACCAGATCTCACCCCTTGATTTCCCAGCTCAAGGATCACATCGCTCACCTTCAATCATGGGCGACGGCCTCTTTCTCCTTCTCCGATTGGCTCTGCCAAGGCTTGACCCGCCTCAGAGACTTGCACCACTGCCTTGACGACACTCTCCGCCTTCCTCAAACCCAAGACTCCCTCCGCCGCCTGCGCTCCCACTCCGCCAGCTGCTGCTGGCTCGACAACCTTCTAGACCAATTCCTTCGCTTTGTTGACGTCTATGGAATCTTCCGTACCTCAGTTTTCGCTCTCAAACAGGACCACTCTGCAGCTCAAGTCGCTTTGAGGAAGAGAGACGACTCCCAGATAGCATTGTACGTCAGAGCTAGAAAGAGAATGGCCAAGGAAATGATCAACCTTGTCAACGCAGTTCGTTGTATTGTTGGAAGGCCAGGACCGGCAGCCGCGCCGTTGGAGCATGTCGGCGATAGTAATTACTATACTACTAGTAATATTGTTGATCATGAGCTGGCTAGGGTTATGAGCGAGGTCGTTCAAGTGACGGTGACGGTGTCTCTTGCCCTGTTTAACGGAATTGCTGCAGCACTCTCATCCGGCTGCCCAACAACGTCATTATCAAAATCGAACATCTCGTCGTCAAGGTGGTCGTGGATGGGAATATTATTTTCAATGGGGTTGATGAGGTGCAAGGAGGCCGTTGAGGATGGCGAGGATCATAGTAGGGTACGAGTCAATAATATTGGAGTTGAGAGCTTACGAAATTTAAGAAAGAAAGGAGAAGAAGAGGTGAAAATAACATTGAAGAAAATGCAGGAACTGGAGGTCTCTATCGCCGCCATTGAAACTTGCTCTGAAACAGTTTTCAGGAGTTTGATTAACGCAAGGGTTTCGCTGCTCAACACTCTCACCCTATTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

344

Amino Acids

38.51

Weight (kDa)

9.69

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016175)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76240
fragaria_vesca FvH4_2g37580
malus_domestica MD08G1003400.v1.1
prunus_persica Prupe.1G355300_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0304151
rosa_laevigata RLG00000011010
rosa_multiflora Rmu_co8398387.1_g000001 Rmu_ssc0000218.1_g000007
rosa_roxburghii Rroxscaffold_7G00164020
rosa_rugosa Rorug06G0328000
rosa_samantha Rh6AG442100 Rh6BG460700 Rh6CG454300 Rh6DG441500
rosa_wichuraiana Rw6G038320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 369
AccII CGCG 1 cut(s) 557
AciI CCGC 8 cut(s) 19, 226, 265, 292, 295, 312, 555, 945
AclWI GGATC 3 cut(s) 96, 159, 831
AcoI YGGCCR 1 cut(s) 489
AcsI RAATTY 1 cut(s) 871
AcyI GRCGYC 1 cut(s) 366
AfaI GTAC 3 cut(s) 385, 467, 837
AfiI CCNNNNNNNGG 1 cut(s) 148
AgsI TTSAA 5 cut(s) 170, 647, 780, 913, 953
AhlI ACTAGT 1 cut(s) 596
AjnI CCWGG 1 cut(s) 541
AluBI AGCT 6 cut(s) 145, 318, 422, 476, 619, 864
AluI AGCT 6 cut(s) 145, 318, 422, 476, 619, 864
Alw21I GWGCWC 1 cut(s) 79
Alw26I GTCTC 6 cut(s) 93, 116, 228, 438, 669, 940
AlwI GGATC 3 cut(s) 96, 159, 831
AlwNI CAGNNNCTG 2 cut(s) 321, 928
AoxI GGCC 4 cut(s) 183, 489, 539, 804
ApeKI GCWGC 8 cut(s) 318, 321, 419, 551, 689, 692, 708, 1003
ApoI RAATTY 1 cut(s) 871
ArsI GACNNNNNNTTYG 2 cut(s) 728, 760
AspLEI GCGC 2 cut(s) 303, 559
AspS9I GGNCC 2 cut(s) 409, 545
AsuHPI GGTGA 5 cut(s) 119, 155, 667, 910, 1009
AvaII GGWCC 2 cut(s) 409, 545
BalI TGGCCA 1 cut(s) 491
Bbv12I GWGCWC 1 cut(s) 79
BbvI GCAGC 8 cut(s) 305, 308, 431, 563, 676, 695, 704, 990
BccI CCATC 3 cut(s) 113, 757, 809
BceAI ACGGC 4 cut(s) 42, 198, 544, 791
BcgI CGANNNNNNTGC 2 cut(s) 981, 1015
BciT130I CCWGG 1 cut(s) 543
BclI TGATCA 2 cut(s) 501, 610
BcoDI GTCTC 6 cut(s) 93, 116, 228, 438, 669, 940
BcuI ACTAGT 1 cut(s) 596
BfaI CTAG 4 cut(s) 341, 477, 597, 624
BfmI CTRYAG 2 cut(s) 417, 690
BglII AGATCT 1 cut(s) 122
Bme1390I CCNGG 1 cut(s) 543
Bme18I GGWCC 2 cut(s) 409, 545
BmgT120I GGNCC 2 cut(s) 409, 545
BmrFI CCNGG 1 cut(s) 543
BpmI CTGGAG 1 cut(s) 950
BpuEI CTTGAG 2 cut(s) 131, 408
BsaHI GRCGYC 1 cut(s) 366
BsaI GGTCTC 1 cut(s) 940
BsaJI CCNNGG 2 cut(s) 214, 492
Bsc4I CCNNNNNNNGG 1 cut(s) 148
Bse118I RCCGGY 1 cut(s) 547
Bse1I ACTGG 1 cut(s) 933
BseBI CCWGG 1 cut(s) 543
BseDI CCNNGG 2 cut(s) 214, 492
BseGI GGATG 3 cut(s) 701, 768, 820
BseLI CCNNNNNNNGG 1 cut(s) 148
BseMII CTCAG 2 cut(s) 244, 402
BseNI ACTGG 1 cut(s) 933
BseXI GCAGC 8 cut(s) 305, 308, 431, 563, 676, 695, 704, 990
BseYI CCCAGC 1 cut(s) 141
Bsh1236I CGCG 1 cut(s) 557
Bsh1285I CGRYCG 1 cut(s) 23
BshFI GGCC 4 cut(s) 185, 491, 541, 806
BsiEI CGRYCG 1 cut(s) 23
BsiHKAI GWGCWC 1 cut(s) 79
BsiSI CCGG 3 cut(s) 16, 548, 705
BslI CCNNNNNNNGG 1 cut(s) 148
BsmAI GTCTC 6 cut(s) 93, 116, 228, 438, 669, 940
BsmBI CGTCTC 1 cut(s) 438
BsnI GGCC 4 cut(s) 185, 491, 541, 806
Bso31I GGTCTC 1 cut(s) 940
Bsp1286I GDGCHC 1 cut(s) 79
Bsp143I GATC 6 cut(s) 101, 122, 151, 501, 610, 823
BspACI CCGC 8 cut(s) 19, 226, 265, 292, 295, 312, 555, 945
BspANI GGCC 4 cut(s) 185, 491, 541, 806
BspCNI CTCAG 2 cut(s) 243, 401
BspFNI CGCG 1 cut(s) 557
BspHI TCATGA 1 cut(s) 613
BspMAI CTGCAG 2 cut(s) 421, 694
BspPI GGATC 3 cut(s) 96, 159, 831
BspTNI GGTCTC 1 cut(s) 940
BsrFI RCCGGY 1 cut(s) 547
BsrI ACTGG 1 cut(s) 933
BssAI RCCGGY 1 cut(s) 547
BssECI CCNNGG 2 cut(s) 214, 492
BssMI GATC 6 cut(s) 101, 122, 151, 501, 610, 823
BssNI GRCGYC 1 cut(s) 366
BssT1I CCWWGG 2 cut(s) 214, 492
Bst2UI CCWGG 1 cut(s) 543
Bst4CI ACNGT 3 cut(s) 655, 661, 970
Bst6I CTCTTC 2 cut(s) 434, 888
BstACI GRCGYC 1 cut(s) 366
BstC8I GCNNGC 6 cut(s) 7, 75, 299, 316, 326, 621
BstDEI CTNAG 2 cut(s) 230, 388
BstF5I GGATG 3 cut(s) 701, 768, 820
BstFNI CGCG 1 cut(s) 557
BstHHI GCGC 2 cut(s) 303, 559
BstKTI GATC 6 cut(s) 104, 125, 154, 504, 613, 826
BstMAI GTCTC 6 cut(s) 93, 116, 228, 438, 669, 940
BstMBI GATC 6 cut(s) 101, 122, 151, 501, 610, 823
BstMCI CGRYCG 1 cut(s) 23
BstMWI GCNNNNNNNGC 4 cut(s) 225, 300, 428, 565
BstNI CCWGG 1 cut(s) 543
BstNSI RCATGY 1 cut(s) 572
BstSCI CCNGG 1 cut(s) 541
BstSFI CTRYAG 2 cut(s) 417, 690
BstUI CGCG 1 cut(s) 557
BstV1I GCAGC 8 cut(s) 305, 308, 431, 563, 676, 695, 704, 990
BstX2I RGATCY 2 cut(s) 101, 122
BstYI RGATCY 2 cut(s) 101, 122
BsuRI GGCC 4 cut(s) 185, 491, 541, 806
BtgZI GCGATG 1 cut(s) 142
BtsCI GGATG 3 cut(s) 701, 768, 820
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 1 cut(s) 244
Cac8I GCNNGC 6 cut(s) 7, 75, 299, 316, 326, 621
CaiI CAGNNNCTG 2 cut(s) 321, 928
CciI TCATGA 1 cut(s) 613
CfoI GCGC 2 cut(s) 303, 559
Cfr10I RCCGGY 1 cut(s) 547
Cfr13I GGNCC 2 cut(s) 409, 545
Csp6I GTAC 3 cut(s) 384, 466, 836
CviAII CATG 3 cut(s) 174, 569, 614
CviQI GTAC 3 cut(s) 384, 466, 836
DdeI CTNAG 2 cut(s) 230, 388
DpnI GATC 6 cut(s) 103, 124, 153, 503, 612, 825
DpnII GATC 6 cut(s) 101, 122, 151, 501, 610, 823
EaeI YGGCCR 1 cut(s) 489
Eam1104I CTCTTC 2 cut(s) 434, 888
EarI CTCTTC 2 cut(s) 434, 888
EciI GGCGGA 3 cut(s) 254, 281, 301
Eco130I CCWWGG 2 cut(s) 214, 492
Eco31I GGTCTC 1 cut(s) 940
Eco47I GGWCC 2 cut(s) 409, 545
EcoRII CCWGG 1 cut(s) 541
EcoT14I CCWWGG 2 cut(s) 214, 492
ErhI CCWWGG 2 cut(s) 214, 492
Esp3I CGTCTC 1 cut(s) 438
FaeI CATG 3 cut(s) 177, 572, 617
FaiI YATR 7 cut(s) 175, 372, 570, 591, 615, 632, 828
FatI CATG 3 cut(s) 173, 568, 613
FauI CCCGC 1 cut(s) 233
FbaI TGATCA 2 cut(s) 501, 610
FokI GGATG 3 cut(s) 688, 775, 827
FspBI CTAG 4 cut(s) 341, 477, 597, 624
GlaI GCGC 2 cut(s) 302, 558
GsaI CCCAGC 1 cut(s) 145
GsuI CTGGAG 1 cut(s) 950
HaeIII GGCC 4 cut(s) 185, 491, 541, 806
HapII CCGG 3 cut(s) 16, 548, 705
HhaI GCGC 2 cut(s) 303, 559
Hin1I GRCGYC 1 cut(s) 366
Hin1II CATG 3 cut(s) 177, 572, 617
Hin6I GCGC 2 cut(s) 301, 557
HinP1I GCGC 2 cut(s) 301, 557
HincII GTYRAC 2 cut(s) 364, 514
HindII GTYRAC 2 cut(s) 364, 514
HinfI GANTC 4 cut(s) 284, 375, 449, 840
HpaII CCGG 3 cut(s) 16, 548, 705
HphI GGTGA 5 cut(s) 119, 155, 667, 910, 1009
Hpy166II GTNNAC 2 cut(s) 364, 514
Hpy188I TCNGA 4 cut(s) 202, 233, 473, 964
Hpy188III TCNNGA 3 cut(s) 341, 614, 976
Hpy8I GTNNAC 2 cut(s) 364, 514
Hpy99I CGWCG 2 cut(s) 184, 748
HpyAV CCTTC 6 cut(s) 176, 205, 278, 347, 362, 531
HpyCH4III ACNGT 3 cut(s) 655, 661, 970
HpyCH4IV ACGT 3 cut(s) 366, 468, 719
HpyCH4V TGCA 5 cut(s) 241, 419, 692, 798, 922
HpyF10VI GCNNNNNNNGC 4 cut(s) 225, 300, 428, 565
HpyF3I CTNAG 2 cut(s) 230, 388
HpySE526I ACGT 3 cut(s) 366, 468, 719
Hsp92I GRCGYC 1 cut(s) 366
Hsp92II CATG 3 cut(s) 177, 572, 617
HspAI GCGC 2 cut(s) 301, 557
Ksp22I TGATCA 2 cut(s) 501, 610
Kzo9I GATC 6 cut(s) 101, 122, 151, 501, 610, 823
LmnI GCTCC 2 cut(s) 308, 565
Lsp1109I GCAGC 8 cut(s) 305, 308, 431, 563, 676, 695, 704, 990
MaeI CTAG 4 cut(s) 341, 477, 597, 624
MaeII ACGT 3 cut(s) 366, 468, 719
MaeIII GTNAC 2 cut(s) 649, 655
MalI GATC 6 cut(s) 103, 124, 153, 503, 612, 825
MboI GATC 6 cut(s) 101, 122, 151, 501, 610, 823
MboII GAAGA 5 cut(s) 370, 451, 902, 905, 925
MflI RGATCY 2 cut(s) 101, 122
MhlI GDGCHC 1 cut(s) 79
MlsI TGGCCA 1 cut(s) 491
MluCI AATT 5 cut(s) 347, 583, 684, 871, 1027
MluNI TGGCCA 1 cut(s) 491
MlyI GAGTC 3 cut(s) 278, 443, 849
MmeI TCCRAC 2 cut(s) 514, 543
Mox20I TGGCCA 1 cut(s) 491
MscI TGGCCA 1 cut(s) 491
MseI TTAA 5 cut(s) 678, 875, 987, 1026, 1030
Msp20I TGGCCA 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 318
MspI CCGG 3 cut(s) 16, 548, 705
MspR9I CCNGG 1 cut(s) 543
MvaI CCWGG 1 cut(s) 543
MvnI CGCG 1 cut(s) 557
MwoI GCNNNNNNNGC 4 cut(s) 225, 300, 428, 565
NdeII GATC 6 cut(s) 101, 122, 151, 501, 610, 823
NlaIII CATG 3 cut(s) 177, 572, 617
NmuCI GTSAC 2 cut(s) 649, 655
NspI RCATGY 1 cut(s) 572
PacI TTAATTAA 1 cut(s) 1030
PagI TCATGA 1 cut(s) 613
PcsI WCGNNNNNNNCGW 1 cut(s) 740
PfeI GAWTC 1 cut(s) 375
PflFI GACNNNGTC 1 cut(s) 661
PleI GAGTC 3 cut(s) 278, 443, 848
PpsI GAGTC 3 cut(s) 278, 443, 848
Psp6I CCWGG 1 cut(s) 541
PspFI CCCAGC 1 cut(s) 141
PspGI CCWGG 1 cut(s) 541
PspPI GGNCC 2 cut(s) 409, 545
PstI CTGCAG 2 cut(s) 421, 694
PstNI CAGNNNCTG 2 cut(s) 321, 928
PsuI RGATCY 2 cut(s) 101, 122
PsyI GACNNNGTC 1 cut(s) 661
PvuII CAGCTG 1 cut(s) 318
RsaI GTAC 3 cut(s) 385, 467, 837
RsaNI GTAC 3 cut(s) 384, 466, 836
SaqAI TTAA 5 cut(s) 678, 875, 987, 1026, 1030
Sau3AI GATC 6 cut(s) 101, 122, 151, 501, 610, 823
Sau96I GGNCC 2 cut(s) 409, 545
SchI GAGTC 3 cut(s) 278, 443, 849
ScrFI CCNGG 1 cut(s) 543
SduI GDGCHC 1 cut(s) 79
SfcI CTRYAG 2 cut(s) 417, 690
SinI GGWCC 2 cut(s) 409, 545
SmlI CTYRAG 2 cut(s) 146, 423
SmoI CTYRAG 2 cut(s) 146, 423
SpeI ACTAGT 1 cut(s) 596
Sse9I AATT 5 cut(s) 347, 583, 684, 871, 1027
SsiI CCGC 8 cut(s) 19, 226, 265, 292, 295, 312, 555, 945
SspI AATATT 3 cut(s) 604, 771, 850
SspMI CTAG 4 cut(s) 341, 477, 597, 624
StyD4I CCNGG 1 cut(s) 541
StyI CCWWGG 2 cut(s) 214, 492
TaaI ACNGT 3 cut(s) 655, 661, 970
TaiI ACGT 3 cut(s) 369, 471, 722
TaqI TCGA 2 cut(s) 330, 734
TasI AATT 5 cut(s) 347, 583, 684, 871, 1027
TauI GCSGC 3 cut(s) 297, 557, 947
TfiI GAWTC 1 cut(s) 375
Tru1I TTAA 5 cut(s) 678, 875, 987, 1026, 1030
Tru9I TTAA 5 cut(s) 678, 875, 987, 1026, 1030
TscAI CASTG 1 cut(s) 251
TseFI GTSAC 2 cut(s) 649, 655
TseI GCWGC 8 cut(s) 318, 321, 419, 551, 689, 692, 708, 1003
Tsp45I GTSAC 2 cut(s) 649, 655
TspGWI ACGGA 2 cut(s) 371, 696
TspRI CASTG 1 cut(s) 251
Tth111I GACNNNGTC 1 cut(s) 661
VpaK11BI GGWCC 2 cut(s) 409, 545
XapI RAATTY 1 cut(s) 871
XbaI TCTAGA 1 cut(s) 340
XceI RCATGY 1 cut(s) 572
XspI CTAG 4 cut(s) 341, 477, 597, 624
ZraI GACGTC 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.