Prupe.1G355700_v2.0.a1

Arabidopsis protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015948
Physical Location & Seq
Forward (+)
33002280 .. 33003365
1086 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G355700.1

Sequence Viewer

Length: 765 bp
ATGGCAATCGCATGTCTAAACTTTGAAGCTCTGAAAGACCTGCATAACTCTGCAAATAACCTTCTCTACTCACCCACGATCCAACAAGCACTCGTCCACGACAGACAGGAGAAATGGGTTCATCAAGTCTCAGAAGCATCTCTGCGAATGTTGGATGTGTGTGGCATTTCCAAAGACGTTCTTTTAATGGTAAAAGAGCATCTCCAAGACCTTCAATCCATGTTGCGCAGAGTAAGCAGCGACCAAGAAGCGGATATTGATAACAAAATAGGAGCCTACAATTGCTACAGGAAGAAGCTCAAGCAAGAGACGGTCAAGTGCTTGAATTCTTTCAAAGGGATCAAAAAGAACAAGTCGTCCATGTGTATCTGTACTTCACAACCACTGCAAGAGTCGTCCTCTGTATACATGGACCACAACCTTAGGGTGGTGGTAGATGTGCTGAGACAAGTGAGGGTGACCGCCGTTTCCATCGTGGAGACTCTCTTGTCCCTAATTTCCATTCCTTGGCTCGACCGGAAATCAGCTACTAGTACGACCAAATCCATATTCATCAAGGCCAAGTTCATGCGTCCACGTTGGAGTTGGGGAAACAGACACAGAGTGTATGACATATGCGACGCCACGGCGCTTCAAAGTGCCAGCAAAAGATTGGACGCTGTAGAGATTGCCATTCAAGATCTTGAAGCTGAGTTAGACTGCATGTTTAGGCGTTTGATCCACACCAGAGTTGCGCTTCTCAATATACTTACCACCACCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF241

Protein Analysis

255

Amino Acids

29.01

Weight (kDa)

9.1

Isoelectric Point (pI)

52.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015948)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G20520 AT1G76210
fragaria_vesca FvH4_2g37620
malus_domestica MD15G1003300.v1.1
prunus_persica Prupe.1G355700_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0304111
rosa_laevigata RLG00000011014
rosa_multiflora Rmu_ssc0000218.1_g000003
rosa_roxburghii Rroxscaffold_7G00164060
rosa_rugosa Rorug06G0327700
rosa_samantha Rh6AG441700 Rh6BG461100 Rh6CG453900 Rh6DG441100
rosa_wichuraiana Rw6G038280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 487
Acc16I TGCGCA 1 cut(s) 227
Acc36I ACCTGC 1 cut(s) 48
AccB7I CCANNNNNTGG 1 cut(s) 507
AccI GTMKAC 1 cut(s) 405
AciI CCGC 2 cut(s) 251, 462
AclWI GGATC 3 cut(s) 73, 347, 712
AcsI RAATTY 1 cut(s) 325
AcyI GRCGYC 1 cut(s) 621
AdeI CACNNNGTG 1 cut(s) 604
AfaI GTAC 2 cut(s) 373, 535
AfiI CCNNNNNNNGG 3 cut(s) 250, 427, 507
AgsI TTSAA 7 cut(s) 26, 215, 325, 334, 635, 677, 686
AhlI ACTAGT 1 cut(s) 530
AjuI GAANNNNNNNTTGG 2 cut(s) 533, 565
AloI GAACNNNNNNTCC 2 cut(s) 341, 373
AluBI AGCT 4 cut(s) 29, 298, 527, 689
AluI AGCT 4 cut(s) 29, 298, 527, 689
Alw26I GTCTC 4 cut(s) 133, 302, 439, 473
AlwI GGATC 3 cut(s) 73, 347, 712
AoxI GGCC 1 cut(s) 558
ApeKI GCWGC 1 cut(s) 237
ApoI RAATTY 1 cut(s) 325
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 3 cut(s) 228, 631, 736
AspS9I GGNCC 1 cut(s) 412
AsuHPI GGTGA 2 cut(s) 63, 469
AvaII GGWCC 1 cut(s) 412
AxyI CCTNAGG 1 cut(s) 422
BarI GAAGNNNNNNTAC 2 cut(s) 358, 390
BbvI GCAGC 1 cut(s) 249
BccI CCATC 1 cut(s) 479
BceAI ACGGC 2 cut(s) 449, 642
BcoDI GTCTC 4 cut(s) 133, 302, 439, 473
BcuI ACTAGT 1 cut(s) 530
BfaI CTAG 2 cut(s) 531, 763
BfmI CTRYAG 2 cut(s) 286, 660
BfoI RGCGCY 1 cut(s) 632
BfuAI ACCTGC 1 cut(s) 48
BglII AGATCT 1 cut(s) 679
BisI GCNGC 1 cut(s) 238
BlsI GCNGC 1 cut(s) 239
Bme18I GGWCC 1 cut(s) 412
BmgT120I GGNCC 1 cut(s) 412
BmiI GGNNCC 1 cut(s) 274
BmsI GCATC 2 cut(s) 146, 208
BplI GAGNNNNNCTC 2 cut(s) 383, 415
BpuEI CTTGAG 1 cut(s) 284
BsaHI GRCGYC 1 cut(s) 621
BsaJI CCNNGG 2 cut(s) 506, 624
BsaWI WCCGGW 1 cut(s) 516
Bsc4I CCNNNNNNNGG 3 cut(s) 250, 427, 507
Bse21I CCTNAGG 1 cut(s) 422
BseDI CCNNGG 2 cut(s) 506, 624
BseGI GGATG 1 cut(s) 160
BseLI CCNNNNNNNGG 3 cut(s) 250, 427, 507
BseMII CTCAG 3 cut(s) 144, 434, 681
BseXI GCAGC 1 cut(s) 249
Bsh1285I CGRYCG 1 cut(s) 517
BshFI GGCC 1 cut(s) 560
BsiEI CGRYCG 1 cut(s) 517
BsiSI CCGG 1 cut(s) 517
BslFI GGGAC 1 cut(s) 475
BslI CCNNNNNNNGG 3 cut(s) 250, 427, 507
BsmAI GTCTC 4 cut(s) 133, 302, 439, 473
BsmBI CGTCTC 1 cut(s) 302
BsmFI GGGAC 1 cut(s) 475
BsnI GGCC 1 cut(s) 560
Bsp143I GATC 4 cut(s) 78, 339, 679, 717
BspACI CCGC 2 cut(s) 251, 462
BspANI GGCC 1 cut(s) 560
BspCNI CTCAG 3 cut(s) 143, 435, 682
BspLI GGNNCC 1 cut(s) 274
BspMI ACCTGC 1 cut(s) 48
BspPI GGATC 3 cut(s) 73, 347, 712
BssECI CCNNGG 2 cut(s) 506, 624
BssMI GATC 4 cut(s) 78, 339, 679, 717
BssNAI GTATAC 1 cut(s) 406
BssNI GRCGYC 1 cut(s) 621
BssT1I CCWWGG 1 cut(s) 506
Bst1107I GTATAC 1 cut(s) 406
Bst4CI ACNGT 1 cut(s) 313
BstACI GRCGYC 1 cut(s) 621
BstC8I GCNNGC 1 cut(s) 643
BstDEI CTNAG 4 cut(s) 130, 422, 443, 690
BstDSI CCRYGG 1 cut(s) 624
BstEII GGTNACC 1 cut(s) 457
BstF5I GGATG 1 cut(s) 160
BstH2I RGCGCY 1 cut(s) 632
BstHHI GCGC 3 cut(s) 228, 631, 736
BstKTI GATC 4 cut(s) 81, 342, 682, 720
BstMAI GTCTC 4 cut(s) 133, 302, 439, 473
BstMBI GATC 4 cut(s) 78, 339, 679, 717
BstMCI CGRYCG 1 cut(s) 517
BstMWI GCNNNNNNNGC 1 cut(s) 234
BstNSI RCATGY 2 cut(s) 15, 706
BstPI GGTNACC 1 cut(s) 457
BstSFI CTRYAG 2 cut(s) 286, 660
BstV1I GCAGC 1 cut(s) 249
BstX2I RGATCY 1 cut(s) 679
BstYI RGATCY 1 cut(s) 679
BstZ17I GTATAC 1 cut(s) 406
Bsu36I CCTNAGG 1 cut(s) 422
BsuRI GGCC 1 cut(s) 560
BtgI CCRYGG 1 cut(s) 624
BtsCI GGATG 1 cut(s) 160
BtsI GCAGTG 1 cut(s) 383
BtsIMutI CAGTG 1 cut(s) 383
BveI ACCTGC 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 643
CfoI GCGC 3 cut(s) 228, 631, 736
Cfr13I GGNCC 1 cut(s) 412
CseI GACGC 3 cut(s) 560, 629, 665
Csp6I GTAC 2 cut(s) 372, 534
CviAII CATG 6 cut(s) 12, 220, 361, 409, 568, 703
CviJI RGCY 7 cut(s) 29, 275, 298, 511, 527, 560, 689
CviKI_1 RGCY 7 cut(s) 29, 275, 298, 511, 527, 560, 689
CviQI GTAC 2 cut(s) 372, 534
DdeI CTNAG 4 cut(s) 130, 422, 443, 690
DpnI GATC 4 cut(s) 80, 341, 681, 719
DpnII GATC 4 cut(s) 78, 339, 679, 717
DraIII CACNNNGTG 1 cut(s) 604
DrdI GACNNNNNNGTC 1 cut(s) 487
DseDI GACNNNNNNGTC 1 cut(s) 487
Eco130I CCWWGG 1 cut(s) 506
Eco47I GGWCC 1 cut(s) 412
Eco81I CCTNAGG 1 cut(s) 422
Eco91I GGTNACC 1 cut(s) 457
EcoO65I GGTNACC 1 cut(s) 457
EcoRI GAATTC 1 cut(s) 325
EcoT14I CCWWGG 1 cut(s) 506
ErhI CCWWGG 1 cut(s) 506
Esp3I CGTCTC 1 cut(s) 302
FaeI CATG 6 cut(s) 15, 223, 364, 412, 571, 706
FalI AAGNNNNNCTT 2 cut(s) 165, 197
FaqI GGGAC 1 cut(s) 475
FatI CATG 6 cut(s) 11, 219, 360, 408, 567, 702
FauNDI CATATG 1 cut(s) 614
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 1 cut(s) 238
FokI GGATG 1 cut(s) 167
Fsp4HI GCNGC 1 cut(s) 238
FspBI CTAG 2 cut(s) 531, 763
FspI TGCGCA 1 cut(s) 227
GlaI GCGC 3 cut(s) 227, 630, 735
GluI GCNGC 1 cut(s) 238
HaeII RGCGCY 1 cut(s) 632
HaeIII GGCC 1 cut(s) 560
HapII CCGG 1 cut(s) 517
HgaI GACGC 3 cut(s) 560, 629, 665
HhaI GCGC 3 cut(s) 228, 631, 736
Hin1I GRCGYC 1 cut(s) 621
Hin1II CATG 6 cut(s) 15, 223, 364, 412, 571, 706
Hin6I GCGC 3 cut(s) 226, 629, 734
HinP1I GCGC 3 cut(s) 226, 629, 734
HinfI GANTC 2 cut(s) 392, 481
HpaII CCGG 1 cut(s) 517
HphI GGTGA 2 cut(s) 63, 469
Hpy166II GTNNAC 3 cut(s) 97, 406, 575
Hpy188I TCNGA 2 cut(s) 33, 133
Hpy188III TCNNGA 2 cut(s) 677, 683
Hpy8I GTNNAC 3 cut(s) 97, 406, 575
Hpy99I CGWCG 1 cut(s) 623
HpyAV CCTTC 2 cut(s) 71, 221
HpyCH4III ACNGT 1 cut(s) 313
HpyCH4IV ACGT 2 cut(s) 177, 577
HpyCH4V TGCA 4 cut(s) 43, 53, 388, 702
HpyF10VI GCNNNNNNNGC 1 cut(s) 234
HpyF3I CTNAG 4 cut(s) 130, 422, 443, 690
HpySE526I ACGT 2 cut(s) 177, 577
Hsp92I GRCGYC 1 cut(s) 621
Hsp92II CATG 6 cut(s) 15, 223, 364, 412, 571, 706
HspAI GCGC 3 cut(s) 226, 629, 734
Kzo9I GATC 4 cut(s) 78, 339, 679, 717
LmnI GCTCC 1 cut(s) 272
LpnPI CCDG 6 cut(s) 53, 92, 274, 530, 655, 739
Lsp1109I GCAGC 1 cut(s) 249
LweI GCATC 2 cut(s) 146, 208
MaeI CTAG 2 cut(s) 531, 763
MaeII ACGT 2 cut(s) 177, 577
MaeIII GTNAC 1 cut(s) 457
MalI GATC 4 cut(s) 80, 341, 681, 719
MboI GATC 4 cut(s) 78, 339, 679, 717
MboII GAAGA 1 cut(s) 304
MfeI CAATTG 1 cut(s) 280
MflI RGATCY 1 cut(s) 679
MluCI AATT 3 cut(s) 280, 325, 495
MlyI GAGTC 2 cut(s) 401, 475
MmeI TCCRAC 3 cut(s) 106, 132, 560
MnlI CCTC 2 cut(s) 409, 447
MroXI GAANNNNTTC 1 cut(s) 329
MseI TTAA 1 cut(s) 185
MspI CCGG 1 cut(s) 517
MunI CAATTG 1 cut(s) 280
MwoI GCNNNNNNNGC 1 cut(s) 234
NdeI CATATG 1 cut(s) 614
NdeII GATC 4 cut(s) 78, 339, 679, 717
NlaIII CATG 6 cut(s) 15, 223, 364, 412, 571, 706
NlaIV GGNNCC 1 cut(s) 274
NmuCI GTSAC 1 cut(s) 457
NsbI TGCGCA 1 cut(s) 227
NspI RCATGY 2 cut(s) 15, 706
PdmI GAANNNNTTC 1 cut(s) 329
PflMI CCANNNNNTGG 1 cut(s) 507
PkrI GCNGC 1 cut(s) 239
PleI GAGTC 2 cut(s) 400, 475
PpsI GAGTC 2 cut(s) 400, 475
PspEI GGTNACC 1 cut(s) 457
PspN4I GGNNCC 1 cut(s) 274
PspPI GGNCC 1 cut(s) 412
PsuI RGATCY 1 cut(s) 679
RsaI GTAC 2 cut(s) 373, 535
RsaNI GTAC 2 cut(s) 372, 534
SaqAI TTAA 1 cut(s) 185
SatI GCNGC 1 cut(s) 238
Sau3AI GATC 4 cut(s) 78, 339, 679, 717
Sau96I GGNCC 1 cut(s) 412
SchI GAGTC 2 cut(s) 401, 475
SfaNI GCATC 2 cut(s) 146, 208
SfcI CTRYAG 2 cut(s) 286, 660
SinI GGWCC 1 cut(s) 412
SmlI CTYRAG 1 cut(s) 299
SmoI CTYRAG 1 cut(s) 299
SpeI ACTAGT 1 cut(s) 530
Sse9I AATT 3 cut(s) 280, 325, 495
SsiI CCGC 2 cut(s) 251, 462
SspMI CTAG 2 cut(s) 531, 763
StyI CCWWGG 1 cut(s) 506
TaaI ACNGT 1 cut(s) 313
TaiI ACGT 2 cut(s) 180, 580
TaqI TCGA 1 cut(s) 513
TasI AATT 3 cut(s) 280, 325, 495
TatI WGTACW 1 cut(s) 371
Tru1I TTAA 1 cut(s) 185
Tru9I TTAA 1 cut(s) 185
TscAI CASTG 1 cut(s) 390
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 1 cut(s) 237
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 3 cut(s) 110, 541, 556
TspRI CASTG 1 cut(s) 390
Van91I CCANNNNNTGG 1 cut(s) 507
VpaK11BI GGWCC 1 cut(s) 412
XapI RAATTY 1 cut(s) 325
XceI RCATGY 2 cut(s) 15, 706
XcmI CCANNNNNNNNNTGG 2 cut(s) 582, 649
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 2 cut(s) 531, 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.