superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g26130 FvH4_7g26130 FvH4_7g26130 FvH4_7g26130 FvH4_7g26130 |
| malus_domestica | MD08G1039700.v1.1 MD15G1034300.v1.1 |
| prunus_persica | Prupe.1G388400_v2.0.a1 |
| pyrus_communis | pycom08g03190 pycom15g03160 |
| rosa_chinensis | RchiOBHm_Chr1g0372571 |
| rosa_laevigata | RLG00000026890 |
| rosa_multiflora | Rmu_ssc0000419.1_g000012 |
| rosa_roxburghii | Rroxscaffold_4G00284840 |
| rosa_rugosa | Rorug01G0372800 |
| rosa_samantha | Rh1AG381400 Rh1BG344800 Rh1CG358200 Rh1DG376000 |
| rosa_wichuraiana | Rw1G033540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 947 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 970 |
| AccII | CGCG | 1 cut(s) | 299 |
| AciI | CCGC | 6 cut(s) | 299, 302, 471, 2311, 2629, 2637 |
| AclWI | GGATC | 4 cut(s) | 1024, 1398, 1703, 2197 |
| AcoI | YGGCCR | 2 cut(s) | 830, 2626 |
| AcsI | RAATTY | 2 cut(s) | 550, 1950 |
| AcuI | CTGAAG | 6 cut(s) | 96, 375, 881, 1462, 1800, 1987 |
| AcyI | GRCGYC | 1 cut(s) | 96 |
| AfaI | GTAC | 4 cut(s) | 374, 595, 2490, 2787 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 966, 970, 1768 |
| AjnI | CCWGG | 5 cut(s) | 192, 851, 2152, 2359, 2553 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 61, 93, 2457, 2489 |
| AluBI | AGCT | 9 cut(s) | 142, 231, 350, 859, 1436, 1624, 1733, 2441, 2572 |
| AluI | AGCT | 9 cut(s) | 142, 231, 350, 859, 1436, 1624, 1733, 2441, 2572 |
| Alw26I | GTCTC | 9 cut(s) | 183, 203, 252, 1059, 1326, 1373, 1558, 1635, 1982 |
| AlwI | GGATC | 4 cut(s) | 1024, 1398, 1703, 2197 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1808 |
| AoxI | GGCC | 3 cut(s) | 830, 1892, 2626 |
| ApeKI | GCWGC | 5 cut(s) | 38, 228, 1730, 1808, 2432 |
| ApoI | RAATTY | 2 cut(s) | 550, 1950 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 215, 247, 2389, 2421 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 109, 313, 1831, 2648 |
| AspLEI | GCGC | 1 cut(s) | 1179 |
| AspS9I | GGNCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| AsuHPI | GGTGA | 7 cut(s) | 422, 1375, 1572, 2009, 2081, 2225, 2468 |
| AsuII | TTCGAA | 1 cut(s) | 2548 |
| AvaII | GGWCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| AxyI | CCTNAGG | 1 cut(s) | 1813 |
| BaeGI | GKGCMC | 1 cut(s) | 2584 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2297, 2330 |
| BalI | TGGCCA | 1 cut(s) | 832 |
| BanI | GGYRCC | 1 cut(s) | 947 |
| BanII | GRGCYC | 1 cut(s) | 1664 |
| BbsI | GAAGAC | 3 cut(s) | 65, 102, 2121 |
| BbvI | GCAGC | 5 cut(s) | 25, 240, 1742, 1795, 2419 |
| BceAI | ACGGC | 1 cut(s) | 241 |
| BciT130I | CCWGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| BciVI | GTATCC | 1 cut(s) | 2543 |
| BclI | TGATCA | 5 cut(s) | 403, 748, 1134, 1543, 2266 |
| BcoDI | GTCTC | 9 cut(s) | 183, 203, 252, 1059, 1326, 1373, 1558, 1635, 1982 |
| BfaI | CTAG | 2 cut(s) | 461, 615 |
| BfmI | CTRYAG | 4 cut(s) | 1090, 2436, 2653, 2781 |
| BfuI | GTATCC | 1 cut(s) | 2543 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2634 |
| BisI | GCNGC | 7 cut(s) | 39, 229, 300, 1731, 1809, 2433, 2629 |
| BlpI | GCTNAGC | 1 cut(s) | 981 |
| BlsI | GCNGC | 7 cut(s) | 40, 230, 301, 1732, 1810, 2434, 2630 |
| Bme1390I | CCNGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| Bme18I | GGWCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| BmgT120I | GGNCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| BmiI | GGNNCC | 5 cut(s) | 949, 1026, 1027, 1840, 2241 |
| BmrFI | CCNGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| BmrI | ACTGGG | 2 cut(s) | 918, 1191 |
| BmsI | GCATC | 8 cut(s) | 13, 173, 1000, 1264, 1317, 1717, 1795, 2684 |
| BmuI | ACTGGG | 2 cut(s) | 918, 1191 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1521 |
| BpiI | GAAGAC | 3 cut(s) | 65, 102, 2121 |
| BpmI | CTGGAG | 2 cut(s) | 835, 2175 |
| Bpu10I | CCTNAGC | 2 cut(s) | 143, 804 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 981 |
| Bpu14I | TTCGAA | 1 cut(s) | 2548 |
| BsaHI | GRCGYC | 1 cut(s) | 96 |
| BsaI | GGTCTC | 3 cut(s) | 183, 252, 1326 |
| BsaJI | CCNNGG | 5 cut(s) | 90, 192, 852, 2176, 2632 |
| BsaWI | WCCGGW | 1 cut(s) | 2039 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 61, 91, 2457, 2487 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 966, 970, 1768 |
| Bse21I | CCTNAGG | 1 cut(s) | 1813 |
| Bse3DI | GCAATG | 1 cut(s) | 1583 |
| BseBI | CCWGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| BseDI | CCNNGG | 5 cut(s) | 90, 192, 852, 2176, 2632 |
| BseGI | GGATG | 9 cut(s) | 636, 780, 975, 1130, 1246, 1492, 2374, 2563, 2776 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 966, 970, 1768 |
| BseMI | GCAATG | 1 cut(s) | 1583 |
| BseSI | GKGCMC | 1 cut(s) | 2584 |
| BseXI | GCAGC | 5 cut(s) | 25, 240, 1742, 1795, 2419 |
| Bsh1236I | CGCG | 1 cut(s) | 299 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2044 |
| BshFI | GGCC | 3 cut(s) | 832, 1894, 2628 |
| BshNI | GGYRCC | 1 cut(s) | 947 |
| BsiEI | CGRYCG | 1 cut(s) | 2044 |
| BsiSI | CCGG | 3 cut(s) | 121, 2040, 2379 |
| BslFI | GGGAC | 2 cut(s) | 1011, 1198 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 966, 970, 1768 |
| BsmAI | GTCTC | 9 cut(s) | 183, 203, 252, 1059, 1326, 1373, 1558, 1635, 1982 |
| BsmFI | GGGAC | 2 cut(s) | 1011, 1198 |
| BsnI | GGCC | 3 cut(s) | 832, 1894, 2628 |
| Bso31I | GGTCTC | 3 cut(s) | 183, 252, 1326 |
| Bsp119I | TTCGAA | 1 cut(s) | 2548 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1664, 2584 |
| Bsp1407I | TGTACA | 1 cut(s) | 2488 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 981 |
| BspACI | CCGC | 6 cut(s) | 299, 302, 471, 2311, 2629, 2637 |
| BspANI | GGCC | 3 cut(s) | 832, 1894, 2628 |
| BspFNI | CGCG | 1 cut(s) | 299 |
| BspHI | TCATGA | 2 cut(s) | 751, 1861 |
| BspLI | GGNNCC | 5 cut(s) | 949, 1026, 1027, 1840, 2241 |
| BspPI | GGATC | 4 cut(s) | 1024, 1398, 1703, 2197 |
| BspT104I | TTCGAA | 1 cut(s) | 2548 |
| BspT107I | GGYRCC | 1 cut(s) | 947 |
| BspTNI | GGTCTC | 3 cut(s) | 183, 252, 1326 |
| BsrDI | GCAATG | 1 cut(s) | 1583 |
| BsrGI | TGTACA | 1 cut(s) | 2488 |
| BssECI | CCNNGG | 5 cut(s) | 90, 192, 852, 2176, 2632 |
| BssNI | GRCGYC | 1 cut(s) | 96 |
| BssT1I | CCWWGG | 2 cut(s) | 2176, 2632 |
| Bst2UI | CCWGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| Bst4CI | ACNGT | 7 cut(s) | 35, 91, 428, 670, 1286, 1922, 2785 |
| Bst6I | CTCTTC | 3 cut(s) | 153, 1460, 2058 |
| BstACI | GRCGYC | 1 cut(s) | 96 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1003 |
| BstAUI | TGTACA | 1 cut(s) | 2488 |
| BstBI | TTCGAA | 1 cut(s) | 2548 |
| BstC8I | GCNNGC | 4 cut(s) | 285, 1332, 1417, 2612 |
| BstDSI | CCRYGG | 1 cut(s) | 90 |
| BstF5I | GGATG | 9 cut(s) | 636, 780, 975, 1130, 1246, 1492, 2374, 2563, 2776 |
| BstFNI | CGCG | 1 cut(s) | 299 |
| BstHHI | GCGC | 1 cut(s) | 1179 |
| BstMAI | GTCTC | 9 cut(s) | 183, 203, 252, 1059, 1326, 1373, 1558, 1635, 1982 |
| BstMCI | CGRYCG | 1 cut(s) | 2044 |
| BstNI | CCWGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| BstNSI | RCATGY | 1 cut(s) | 1001 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1521 |
| BstSCI | CCNGG | 5 cut(s) | 192, 851, 2152, 2359, 2553 |
| BstSFI | CTRYAG | 4 cut(s) | 1090, 2436, 2653, 2781 |
| BstSLI | GKGCMC | 1 cut(s) | 2584 |
| BstUI | CGCG | 1 cut(s) | 299 |
| BstV1I | GCAGC | 5 cut(s) | 25, 240, 1742, 1795, 2419 |
| BstV2I | GAAGAC | 3 cut(s) | 65, 102, 2121 |
| BstX2I | RGATCY | 2 cut(s) | 1708, 2189 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1036, 1596 |
| BstYI | RGATCY | 2 cut(s) | 1708, 2189 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1813 |
| BsuI | GTATCC | 1 cut(s) | 2543 |
| BsuRI | GGCC | 3 cut(s) | 832, 1894, 2628 |
| BtgI | CCRYGG | 1 cut(s) | 90 |
| BtgZI | GCGATG | 1 cut(s) | 2196 |
| BtsCI | GGATG | 9 cut(s) | 636, 780, 975, 1130, 1246, 1492, 2374, 2563, 2776 |
| BtsI | GCAGTG | 1 cut(s) | 2467 |
| BtsIMutI | CAGTG | 5 cut(s) | 31, 971, 1179, 1486, 2467 |
| Cac8I | GCNNGC | 4 cut(s) | 285, 1332, 1417, 2612 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1808 |
| CciI | TCATGA | 2 cut(s) | 751, 1861 |
| CfoI | GCGC | 1 cut(s) | 1179 |
| Cfr13I | GGNCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| CpoI | CGGWCCG | 1 cut(s) | 304 |
| CseI | GACGC | 1 cut(s) | 104 |
| CsiI | ACCWGGT | 1 cut(s) | 2359 |
| Csp6I | GTAC | 4 cut(s) | 373, 594, 2489, 2786 |
| CspI | CGGWCCG | 1 cut(s) | 304 |
| CviQI | GTAC | 4 cut(s) | 373, 594, 2489, 2786 |
| DraI | TTTAAA | 2 cut(s) | 691, 826 |
| EaeI | YGGCCR | 2 cut(s) | 830, 2626 |
| Eam1104I | CTCTTC | 3 cut(s) | 153, 1460, 2058 |
| EarI | CTCTTC | 3 cut(s) | 153, 1460, 2058 |
| EciI | GGCGGA | 1 cut(s) | 317 |
| Eco130I | CCWWGG | 2 cut(s) | 2176, 2632 |
| Eco24I | GRGCYC | 1 cut(s) | 1664 |
| Eco31I | GGTCTC | 3 cut(s) | 183, 252, 1326 |
| Eco32I | GATATC | 1 cut(s) | 607 |
| Eco47I | GGWCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| Eco57I | CTGAAG | 6 cut(s) | 96, 375, 881, 1462, 1800, 1987 |
| Eco81I | CCTNAGG | 1 cut(s) | 1813 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1025 |
| EcoRII | CCWGG | 5 cut(s) | 192, 851, 2152, 2359, 2553 |
| EcoRV | GATATC | 1 cut(s) | 607 |
| EcoT14I | CCWWGG | 2 cut(s) | 2176, 2632 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 1664 |
| ErhI | CCWWGG | 2 cut(s) | 2176, 2632 |
| FaqI | GGGAC | 2 cut(s) | 1011, 1198 |
| FbaI | TGATCA | 5 cut(s) | 403, 748, 1134, 1543, 2266 |
| Fnu4HI | GCNGC | 7 cut(s) | 39, 229, 300, 1731, 1809, 2433, 2629 |
| FokI | GGATG | 9 cut(s) | 623, 787, 982, 1137, 1253, 1499, 2381, 2570, 2783 |
| FriOI | GRGCYC | 1 cut(s) | 1664 |
| Fsp4HI | GCNGC | 7 cut(s) | 39, 229, 300, 1731, 1809, 2433, 2629 |
| FspBI | CTAG | 2 cut(s) | 461, 615 |
| GlaI | GCGC | 1 cut(s) | 1178 |
| GluI | GCNGC | 7 cut(s) | 39, 229, 300, 1731, 1809, 2433, 2629 |
| GsuI | CTGGAG | 2 cut(s) | 835, 2175 |
| HaeIII | GGCC | 3 cut(s) | 832, 1894, 2628 |
| HapII | CCGG | 3 cut(s) | 121, 2040, 2379 |
| HgaI | GACGC | 1 cut(s) | 104 |
| HhaI | GCGC | 1 cut(s) | 1179 |
| Hin1I | GRCGYC | 1 cut(s) | 96 |
| Hin6I | GCGC | 1 cut(s) | 1177 |
| HinP1I | GCGC | 1 cut(s) | 1177 |
| HincII | GTYRAC | 2 cut(s) | 738, 1282 |
| HindII | GTYRAC | 2 cut(s) | 738, 1282 |
| HindIII | AAGCTT | 2 cut(s) | 348, 1622 |
| HpaII | CCGG | 3 cut(s) | 121, 2040, 2379 |
| HphI | GGTGA | 7 cut(s) | 422, 1375, 1572, 2009, 2081, 2225, 2468 |
| Hpy166II | GTNNAC | 7 cut(s) | 94, 738, 769, 1282, 1580, 1690, 2476 |
| Hpy8I | GTNNAC | 7 cut(s) | 94, 738, 769, 1282, 1580, 1690, 2476 |
| HpyAV | CCTTC | 9 cut(s) | 60, 231, 265, 889, 1853, 1873, 2013, 2195, 2226 |
| HpyCH4III | ACNGT | 7 cut(s) | 35, 91, 428, 670, 1286, 1922, 2785 |
| HpyCH4IV | ACGT | 1 cut(s) | 2804 |
| HpySE526I | ACGT | 1 cut(s) | 2804 |
| Hsp92I | GRCGYC | 1 cut(s) | 96 |
| HspAI | GCGC | 1 cut(s) | 1177 |
| KflI | GGGWCCC | 1 cut(s) | 1025 |
| Ksp22I | TGATCA | 5 cut(s) | 403, 748, 1134, 1543, 2266 |
| LmnI | GCTCC | 3 cut(s) | 854, 856, 2239 |
| Lsp1109I | GCAGC | 5 cut(s) | 25, 240, 1742, 1795, 2419 |
| LweI | GCATC | 8 cut(s) | 13, 173, 1000, 1264, 1317, 1717, 1795, 2684 |
| MabI | ACCWGGT | 1 cut(s) | 2359 |
| MaeI | CTAG | 2 cut(s) | 461, 615 |
| MaeII | ACGT | 1 cut(s) | 2804 |
| MaeIII | GTNAC | 8 cut(s) | 428, 557, 940, 1639, 1922, 1997, 2332, 2668 |
| MfeI | CAATTG | 3 cut(s) | 125, 991, 2323 |
| MflI | RGATCY | 2 cut(s) | 1708, 2189 |
| MhlI | GDGCHC | 2 cut(s) | 1664, 2584 |
| MlsI | TGGCCA | 1 cut(s) | 832 |
| MluNI | TGGCCA | 1 cut(s) | 832 |
| MlyI | GAGTC | 8 cut(s) | 205, 698, 1165, 1391, 1477, 1499, 1537, 1970 |
| MmeI | TCCRAC | 1 cut(s) | 516 |
| Mox20I | TGGCCA | 1 cut(s) | 832 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 4 cut(s) | 109, 313, 1831, 2648 |
| MscI | TGGCCA | 1 cut(s) | 832 |
| MseI | TTAA | 8 cut(s) | 47, 690, 825, 1767, 1914, 2081, 2274, 2445 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1594, 2605 |
| Msp20I | TGGCCA | 1 cut(s) | 832 |
| MspA1I | CMGCKG | 1 cut(s) | 1733 |
| MspI | CCGG | 3 cut(s) | 121, 2040, 2379 |
| MspR9I | CCNGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| MunI | CAATTG | 3 cut(s) | 125, 991, 2323 |
| MvaI | CCWGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| MvnI | CGCG | 1 cut(s) | 299 |
| NlaIV | GGNNCC | 5 cut(s) | 949, 1026, 1027, 1840, 2241 |
| NmeAIII | GCCGAG | 1 cut(s) | 235 |
| NmuCI | GTSAC | 2 cut(s) | 428, 1997 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 1001 |
| NspV | TTCGAA | 1 cut(s) | 2548 |
| PagI | TCATGA | 2 cut(s) | 751, 1861 |
| PdmI | GAANNNNTTC | 4 cut(s) | 109, 313, 1831, 2648 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 970 |
| PfoI | TCCNGGA | 1 cut(s) | 2553 |
| PkrI | GCNGC | 7 cut(s) | 40, 230, 301, 1732, 1810, 2434, 2630 |
| PleI | GAGTC | 8 cut(s) | 205, 698, 1164, 1391, 1476, 1498, 1536, 1969 |
| PpsI | GAGTC | 8 cut(s) | 205, 698, 1164, 1391, 1476, 1498, 1536, 1969 |
| PpuMI | RGGWCCY | 1 cut(s) | 1025 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1521 |
| Psp5II | RGGWCCY | 1 cut(s) | 1025 |
| Psp6I | CCWGG | 5 cut(s) | 192, 851, 2152, 2359, 2553 |
| PspGI | CCWGG | 5 cut(s) | 192, 851, 2152, 2359, 2553 |
| PspN4I | GGNNCC | 5 cut(s) | 949, 1026, 1027, 1840, 2241 |
| PspPI | GGNCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| PspPPI | RGGWCCY | 1 cut(s) | 1025 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 365, 397, 912, 944 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1808 |
| PsuI | RGATCY | 2 cut(s) | 1708, 2189 |
| PvuII | CAGCTG | 1 cut(s) | 1733 |
| RsaI | GTAC | 4 cut(s) | 374, 595, 2490, 2787 |
| RsaNI | GTAC | 4 cut(s) | 373, 594, 2489, 2786 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1594, 2605 |
| Rsr2I | CGGWCCG | 1 cut(s) | 304 |
| RsrII | CGGWCCG | 1 cut(s) | 304 |
| SaqAI | TTAA | 8 cut(s) | 47, 690, 825, 1767, 1914, 2081, 2274, 2445 |
| SatI | GCNGC | 7 cut(s) | 39, 229, 300, 1731, 1809, 2433, 2629 |
| Sau96I | GGNCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| SchI | GAGTC | 8 cut(s) | 205, 698, 1165, 1391, 1477, 1499, 1537, 1970 |
| ScrFI | CCNGG | 5 cut(s) | 194, 853, 2154, 2361, 2555 |
| SduI | GDGCHC | 2 cut(s) | 1664, 2584 |
| SexAI | ACCWGGT | 1 cut(s) | 2359 |
| SfaNI | GCATC | 8 cut(s) | 13, 173, 1000, 1264, 1317, 1717, 1795, 2684 |
| SfcI | CTRYAG | 4 cut(s) | 1090, 2436, 2653, 2781 |
| SfuI | TTCGAA | 1 cut(s) | 2548 |
| SinI | GGWCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1594, 2605 |
| SsiI | CCGC | 6 cut(s) | 299, 302, 471, 2311, 2629, 2637 |
| SspI | AATATT | 1 cut(s) | 509 |
| SspMI | CTAG | 2 cut(s) | 461, 615 |
| StyD4I | CCNGG | 5 cut(s) | 192, 851, 2152, 2359, 2553 |
| StyI | CCWWGG | 2 cut(s) | 2176, 2632 |
| TaaI | ACNGT | 7 cut(s) | 35, 91, 428, 670, 1286, 1922, 2785 |
| TaiI | ACGT | 1 cut(s) | 2807 |
| TaqI | TCGA | 5 cut(s) | 2074, 2135, 2353, 2548, 2661 |
| TaqII | GACCGA | 1 cut(s) | 321 |
| TatI | WGTACW | 2 cut(s) | 593, 2488 |
| TauI | GCSGC | 2 cut(s) | 302, 2631 |
| Tru1I | TTAA | 8 cut(s) | 47, 690, 825, 1767, 1914, 2081, 2274, 2445 |
| Tru9I | TTAA | 8 cut(s) | 47, 690, 825, 1767, 1914, 2081, 2274, 2445 |
| TscAI | CASTG | 5 cut(s) | 38, 971, 1186, 1486, 2467 |
| TseFI | GTSAC | 2 cut(s) | 428, 1997 |
| TseI | GCWGC | 5 cut(s) | 38, 228, 1730, 1808, 2432 |
| Tsp45I | GTSAC | 2 cut(s) | 428, 1997 |
| TspGWI | ACGGA | 1 cut(s) | 2202 |
| TspRI | CASTG | 5 cut(s) | 38, 971, 1186, 1486, 2467 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 970 |
| VpaK11BI | GGWCC | 4 cut(s) | 304, 1025, 1759, 2405 |
| XapI | RAATTY | 2 cut(s) | 550, 1950 |
| XbaI | TCTAGA | 1 cut(s) | 460 |
| XceI | RCATGY | 1 cut(s) | 1001 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 569 |
| XmnI | GAANNNNTTC | 4 cut(s) | 109, 313, 1831, 2648 |
| XspI | CTAG | 2 cut(s) | 461, 615 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |