Rw1G033540
ERF Family

superfamily protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
61598178 .. 61600990
2813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G033540.1

Sequence Viewer

Length: 2766 bp
ATGCATATTTCAGTATGGAAGCCTATATCTCACTGTGCTGCTCTACTAATGGAGAAGAAGACCAGAAGGAGAGATGGTTCTGGTTTATCAGTGGAGGCCAAGAGAAAGCCTTCTGTTCTTCGTCAATTGCAAGAGAACAAGCTCAGGGAGGCTCTTGAAGAAGCATCAGAAGATGGGTCTCTTTCGAAATCGCAGGACATTGATTCCTCTGATGCTCCAAATCAAGATGGCAGCAGCTTTGGAAGGTCAAGATCTCTTGCTAGGCTCCATGCTCAGAGGGAGTTTCTGAGAGCCACAGCACTTGCTGCTGATCGTACATTTTCGACAGAGGACTCCATTCCTGATCTCAATGAAGCATTCAACAAGTTCCTCACAATGTACCCGAAATTCCAGTCTTCGGAGAAGATTGATCATTTGAGAGCAGATGAGTACAGTCACCTCTCAGAGGCTTTTGCCAAGGTATGTCTTGATTACTGTGGTTTCGGGCTGTTTTCGTATCTGCAAACTCTAGCATATTGGGAATCATCTGCATTTACATTGTCTGAGATAACTGCAAATTTGAGTAACCACGCTCTTTATGGTGGTGCTGAGAAAGGCTCTGTTGAACATGATATCAAGACTAGGATTATGGATTACTTGAACATTCCTGAAAATGAATATGGTCTTGTTTTCACTGTTAGCAGAGGTTCTGCCTTTAAATTGTTGGCTGAATCTTACCCTTTCCAAACGAATAAGAAGTTGTTGACAATGTTTGATCACGAGAGCCAGTCTGTGAATTGGATGGCTCAAAGTGCTAAAGAGAAAGGTGCTAAGGTTTATAGTTCCTGGTTTAAATGGCCAACCTTGAAACTTTGCTCTAGGGAGCTGAAAAAGCAAATTGCAAACAAGAAGAGGAGAAAGAAGGATTCTGCAACGGGGCTTTTTGTATTTCCTGTTCAGTCAAGGGTAACTGGGGCAAAGTACTCTTACCAGTGGATGGCACTTGCTCAGCAGAACAATTGGCATGTTTTGCTTGATGCTGGGTCATTGGGTCCTAAGGACATGGATTCACTTGGGCTGTCTCTGTTTCGGCCAGATTTCATTATTACATCATTCTACCGGGTATTTGGATCTGACCCAACTGGATTTGGATGCCTTTTGATCAAGAAATCTGTAATGGGGAGTCTGCAAAGTCAAGGGGGGCGCACTGGGACTGGAATGGTGAGGATTCTCCCGGTTTTTCCACAGTACCTGAGTGATTCTGTGGATGGTATTGATGGATTGGCTGGAAATGAGAATGATGCAGTCAACCGTGAGGAAGAATTATTGCCCGAAGCAGATGGGGGGTCACAGATGCCTGCCTTTTCAGGTGTATTCACTTCCAATCAGGTGAGGGATTGTTTTGAGACAGAAATGGATCAGGACTCAGATAGGGATGGAGCAAGCACCATTTTTGAGGAAGTGGAGAGTATTTCAGTTGGGGAAGTTATGAAGAGTCCAATCTTCAGTGAAGATGAGTCCTCGGACAATTCATACTGGATTGATTTGGGTCAGAGTCCATTTGGTTCTGATCATTCTGGCAATATAATGAAACAGAATACAGGTTCACCCTTGCCACCATTATGGTTCTCCGGCAAGAAAAACAGCAAGATCTCCTCTCCAAAAGTTTCATGTAGAATTCCAAAGAGCCCATTATATGATGATAAAAGGTTAAAGCTCAGACAGCATGAAGATCCTGTGTTGTCTTTTGATGCAGCAATATTATCAGTGTCACATGAGCAGGACCGTGTTAAGGCAATTCCTGAAGAAGATATGTTTGCTGAAACAGATGCTGCTGCCTCAGGAGATGGTAGAATGTACTCAGATTCCGTCCATGTCAGGGAAATTCAAGAAGAATCTGAAATCAGGGAAGTTTCAGTGCCCAGTAGTTCTGGGCTTAAACAAGAAAGTGCTGCAATAAGGAGAGAGACAGAAGGTGACTTTAGACTTCTAGGAAGAAGGGAAACAAATAGATTTTCTGGCAGTAGATTTTTTGGTTTAGAAGAGGGTGATCGAGATCCAAACATGAGTAGTCGAAGGGTATCTTTTACTGTGGGAGACAGCCATAGAGGGATATCAAGCCATATTTTTGAGCCTGGAGAAGCATCTATGACTACCCTTGGTGATGACGAGCTTATGAGTGAAGGAGACTATGCTGATGATCAGGAATGGGGGAGGAGGGAGCCTGAGATAGTTTGTCAGAATCTTGATCATATTAATATGTTGGGTCTGAACAAAACTACTTTCAGACTGCGATACCTTATCAATTGGCTTGTTACCTCGTTACTTCAACTTCGGTTACCTGGTCCTGATGAAGGTGTGGGATTGCCACTTGTGCAAATATATGGTCCGAAGATCAAATATGAAAGGGGGGCAGCTGTGGCTTTCAATGTCAGACAGAGCAGTGGAAAAGGGCTAATTCACCCTGAAGTGGTACAGAGATTGGCCGAAAAAAATGGTATATCTCTTGGCATTGGTATCCTTAGTCATGTGCGTATCGTAGATATCCCTAAGCAACCTTGTGGAGCACTTGATCTTGAAGATACATCTTTGTGCAAGCCAATGGCTAATGGTCGCCAAGGTGGTAAGAATACATTCTTCAGGGTTGAGGTGGTTACAGCTTCACTTGGTTTTTTGACCAACTTTGAAGATGTTTATAAGATGTGGGCTTTTGTTGCCAAGTTTCTTAGTTCATCATTTGTTGAAGGGGATGAGTTATCTACAGTACCAGAGGATTCAGAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

921

Amino Acids

102.61

Weight (kDa)

5.4

Isoelectric Point (pI)

51.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2676
AccB7I CCANNNNNTGG 1 cut(s) 976
AclWI GGATC 4 cut(s) 1117, 1404, 1706, 2030
AcoI YGGCCR 3 cut(s) 836, 1070, 2463
AcsI RAATTY 4 cut(s) 386, 556, 1656, 1863
AcuI CTGAAG 4 cut(s) 1468, 1803, 2466, 2602
AfaI GTAC 8 cut(s) 316, 380, 431, 962, 1229, 1838, 2454, 2745
AfiI CCNNNNNNNGG 7 cut(s) 397, 445, 976, 1771, 1858, 2333, 2449
AjnI CCWGG 3 cut(s) 824, 2113, 2320
AloI GAACNNNNNNTCC 2 cut(s) 61, 93
AluBI AGCT 7 cut(s) 142, 237, 865, 1696, 2152, 2396, 2639
AluI AGCT 7 cut(s) 142, 237, 865, 1696, 2152, 2396, 2639
Alw21I GWGCWC 1 cut(s) 2548
Alw26I GTCTC 6 cut(s) 183, 1065, 1379, 1940, 2070, 2160
AlwI GGATC 4 cut(s) 1117, 1404, 1706, 2030
AlwNI CAGNNNCTG 2 cut(s) 1231, 1811
AoxI GGCC 4 cut(s) 96, 836, 1070, 2463
ApeKI GCWGC 9 cut(s) 38, 231, 234, 305, 1733, 1811, 1814, 1931, 2393
ApoI RAATTY 4 cut(s) 386, 556, 1656, 1863
ArsI GACNNNNNNTTYG 4 cut(s) 377, 409, 2350, 2382
AseI ATTAAT 1 cut(s) 2235
Asp700I GAANNNNTTC 2 cut(s) 109, 2612
AspLEI GCGC 1 cut(s) 1185
AspS9I GGNCC 4 cut(s) 1031, 1762, 2324, 2366
AsuC2I CCSGG 2 cut(s) 1100, 1214
AsuHPI GGTGA 8 cut(s) 428, 1213, 1381, 1578, 1967, 2039, 2153, 2432
AsuII TTCGAA 1 cut(s) 185
AvaII GGWCC 4 cut(s) 1031, 1762, 2324, 2366
AxyI CCTNAGG 2 cut(s) 1035, 1819
BaeGI GKGCMC 1 cut(s) 1902
BalI TGGCCA 1 cut(s) 838
BanII GRGCYC 1 cut(s) 1670
BauI CACGAG 1 cut(s) 758
BbsI GAAGAC 2 cut(s) 65, 387
Bbv12I GWGCWC 1 cut(s) 2548
BbvI GCAGC 9 cut(s) 25, 243, 246, 292, 1745, 1798, 1801, 1918, 2405
BciT130I CCWGG 3 cut(s) 826, 2115, 2322
BciVI GTATCC 1 cut(s) 2507
BclI TGATCA 6 cut(s) 409, 754, 1140, 1549, 2179, 2227
BcnI CCSGG 2 cut(s) 1100, 1214
BcoDI GTCTC 6 cut(s) 183, 1065, 1379, 1940, 2070, 2160
BfaI CTAG 5 cut(s) 261, 509, 621, 858, 1970
BfmI CTRYAG 1 cut(s) 2739
BfuI GTATCC 1 cut(s) 2507
BglII AGATCT 2 cut(s) 251, 1629
BisI GCNGC 9 cut(s) 39, 232, 235, 306, 1734, 1812, 1815, 1932, 2394
BlpI GCTNAGC 1 cut(s) 987
BlsI GCNGC 9 cut(s) 40, 233, 236, 307, 1735, 1813, 1816, 1933, 2395
BmcAI AGTACT 1 cut(s) 962
Bme1390I CCNGG 5 cut(s) 826, 1100, 1214, 2115, 2322
Bme18I GGWCC 4 cut(s) 1031, 1762, 2324, 2366
BmgT120I GGNCC 4 cut(s) 1031, 1762, 2324, 2366
BmiI GGNNCC 3 cut(s) 266, 1032, 2202
BmrFI CCNGG 5 cut(s) 826, 1100, 1214, 2115, 2322
BmrI ACTGGG 3 cut(s) 960, 1197, 1896
BmsI GCATC 9 cut(s) 173, 202, 1006, 1121, 1270, 1323, 1720, 1798, 2132
BmuI ACTGGG 3 cut(s) 960, 1197, 1896
BpiI GAAGAC 2 cut(s) 65, 387
BplI GAGNNNNNCTC 2 cut(s) 581, 613
BpmI CTGGAG 1 cut(s) 2136
Bpu10I CCTNAGC 3 cut(s) 143, 810, 2529
Bpu1102I GCTNAGC 1 cut(s) 987
Bpu14I TTCGAA 1 cut(s) 185
BpuMI CCSGG 2 cut(s) 1100, 1214
BsaBI GATNNNNATC 1 cut(s) 2034
BsaI GGTCTC 1 cut(s) 183
BsaJI CCNNGG 4 cut(s) 456, 1500, 2137, 2596
BsaXI ACNNNNNCTCC 2 cut(s) 61, 91
Bsc4I CCNNNNNNNGG 7 cut(s) 397, 445, 976, 1771, 1858, 2333, 2449
Bse1I ACTGG 9 cut(s) 391, 766, 955, 970, 1126, 1192, 1198, 1520, 1902
Bse21I CCTNAGG 2 cut(s) 1035, 1819
Bse8I GATNNNNATC 1 cut(s) 2034
BseBI CCWGG 3 cut(s) 826, 2115, 2322
BseDI CCNNGG 4 cut(s) 456, 1500, 2137, 2596
BseGI GGATG 6 cut(s) 786, 981, 1136, 1252, 1420, 2734
BseJI GATNNNNATC 1 cut(s) 2034
BseLI CCNNNNNNNGG 7 cut(s) 397, 445, 976, 1771, 1858, 2333, 2449
BseNI ACTGG 9 cut(s) 391, 766, 955, 970, 1126, 1192, 1198, 1520, 1902
BseRI GAGGAG 3 cut(s) 907, 1624, 2209
BseSI GKGCMC 1 cut(s) 1902
BseXI GCAGC 9 cut(s) 25, 243, 246, 292, 1745, 1798, 1801, 1918, 2405
BseYI CCCAGC 1 cut(s) 1019
BshFI GGCC 4 cut(s) 98, 838, 1072, 2465
BsiHKAI GWGCWC 1 cut(s) 2548
BsiSI CCGG 3 cut(s) 1099, 1214, 1611
BslFI GGGAC 1 cut(s) 1204
BslI CCNNNNNNNGG 7 cut(s) 397, 445, 976, 1771, 1858, 2333, 2449
BsmAI GTCTC 6 cut(s) 183, 1065, 1379, 1940, 2070, 2160
BsmFI GGGAC 1 cut(s) 1204
BsmI GAATGC 1 cut(s) 356
BsnI GGCC 4 cut(s) 98, 838, 1072, 2465
Bso31I GGTCTC 1 cut(s) 183
Bsp119I TTCGAA 1 cut(s) 185
Bsp1286I GDGCHC 3 cut(s) 1670, 1902, 2548
Bsp1720I GCTNAGC 1 cut(s) 987
BspANI GGCC 4 cut(s) 98, 838, 1072, 2465
BspLI GGNNCC 3 cut(s) 266, 1032, 2202
BspPI GGATC 4 cut(s) 1117, 1404, 1706, 2030
BspT104I TTCGAA 1 cut(s) 185
BspTNI GGTCTC 1 cut(s) 183
BsrI ACTGG 9 cut(s) 391, 766, 955, 970, 1126, 1192, 1198, 1520, 1902
BssECI CCNNGG 4 cut(s) 456, 1500, 2137, 2596
BssSI CACGAG 1 cut(s) 758
BssT1I CCWWGG 3 cut(s) 456, 2137, 2596
Bst2BI CACGAG 1 cut(s) 758
Bst2UI CCWGG 3 cut(s) 826, 2115, 2322
Bst4CI ACNGT 9 cut(s) 35, 434, 476, 676, 1227, 1292, 1766, 2071, 2743
Bst6I CTCTTC 3 cut(s) 884, 1466, 2016
BstAPI GCANNNNNTGC 2 cut(s) 305, 1009
BstBI TTCGAA 1 cut(s) 185
BstC8I GCNNGC 3 cut(s) 1338, 1423, 2576
BstEII GGTNACC 1 cut(s) 2316
BstENI CCTNNNNNAGG 2 cut(s) 443, 2331
BstF5I GGATG 6 cut(s) 786, 981, 1136, 1252, 1420, 2734
BstHHI GCGC 1 cut(s) 1185
BstMAI GTCTC 6 cut(s) 183, 1065, 1379, 1940, 2070, 2160
BstMWI GCNNNNNNNGC 8 cut(s) 305, 791, 871, 1009, 1702, 2353, 2399, 2693
BstNI CCWGG 3 cut(s) 826, 2115, 2322
BstNSI RCATGY 1 cut(s) 1007
BstPI GGTNACC 1 cut(s) 2316
BstSCI CCNGG 5 cut(s) 824, 1098, 1212, 2113, 2320
BstSFI CTRYAG 1 cut(s) 2739
BstSLI GKGCMC 1 cut(s) 1902
BstV1I GCAGC 9 cut(s) 25, 243, 246, 292, 1745, 1798, 1801, 1918, 2405
BstV2I GAAGAC 2 cut(s) 65, 387
BstX2I RGATCY 5 cut(s) 251, 1109, 1629, 1711, 2035
BstXI CCANNNNNNTGG 1 cut(s) 1602
BstYI RGATCY 5 cut(s) 251, 1109, 1629, 1711, 2035
Bsu36I CCTNAGG 2 cut(s) 1035, 1819
BsuI GTATCC 1 cut(s) 2507
BsuRI GGCC 4 cut(s) 98, 838, 1072, 2465
BtsCI GGATG 6 cut(s) 786, 981, 1136, 1252, 1420, 2734
BtsI GCAGTG 1 cut(s) 2428
BtsIMutI CAGTG 9 cut(s) 31, 96, 672, 977, 1185, 1492, 1752, 1902, 2428
Cac8I GCNNGC 3 cut(s) 1338, 1423, 2576
CaiI CAGNNNCTG 2 cut(s) 1231, 1811
CfoI GCGC 1 cut(s) 1185
Cfr13I GGNCC 4 cut(s) 1031, 1762, 2324, 2366
CsiI ACCWGGT 1 cut(s) 2320
Csp6I GTAC 8 cut(s) 315, 379, 430, 961, 1228, 1837, 2453, 2744
CspCI CAANNNNNGTGG 2 cut(s) 283, 318
CviQI GTAC 8 cut(s) 315, 379, 430, 961, 1228, 1837, 2453, 2744
DraI TTTAAA 2 cut(s) 697, 832
EaeI YGGCCR 3 cut(s) 836, 1070, 2463
Eam1104I CTCTTC 3 cut(s) 884, 1466, 2016
EarI CTCTTC 3 cut(s) 884, 1466, 2016
Eco130I CCWWGG 3 cut(s) 456, 2137, 2596
Eco24I GRGCYC 1 cut(s) 1670
Eco31I GGTCTC 1 cut(s) 183
Eco32I GATATC 3 cut(s) 613, 2094, 2524
Eco47I GGWCC 4 cut(s) 1031, 1762, 2324, 2366
Eco57I CTGAAG 4 cut(s) 1468, 1803, 2466, 2602
Eco81I CCTNAGG 2 cut(s) 1035, 1819
Eco91I GGTNACC 1 cut(s) 2316
EcoNI CCTNNNNNAGG 2 cut(s) 443, 2331
EcoO109I RGGNCCY 1 cut(s) 1031
EcoO65I GGTNACC 1 cut(s) 2316
EcoRI GAATTC 1 cut(s) 1656
EcoRII CCWGG 3 cut(s) 824, 2113, 2320
EcoRV GATATC 3 cut(s) 613, 2094, 2524
EcoT14I CCWWGG 3 cut(s) 456, 2137, 2596
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 1670
ErhI CCWWGG 3 cut(s) 456, 2137, 2596
FalI AAGNNNNNCTT 2 cut(s) 2047, 2079
FaqI GGGAC 1 cut(s) 1204
FbaI TGATCA 6 cut(s) 409, 754, 1140, 1549, 2179, 2227
Fnu4HI GCNGC 9 cut(s) 39, 232, 235, 306, 1734, 1812, 1815, 1932, 2394
FokI GGATG 6 cut(s) 793, 988, 1143, 1259, 1427, 2741
FriOI GRGCYC 1 cut(s) 1670
Fsp4HI GCNGC 9 cut(s) 39, 232, 235, 306, 1734, 1812, 1815, 1932, 2394
FspBI CTAG 5 cut(s) 261, 509, 621, 858, 1970
GlaI GCGC 1 cut(s) 1184
GluI GCNGC 9 cut(s) 39, 232, 235, 306, 1734, 1812, 1815, 1932, 2394
GsaI CCCAGC 1 cut(s) 1023
GsuI CTGGAG 1 cut(s) 2136
HaeIII GGCC 4 cut(s) 98, 838, 1072, 2465
HapII CCGG 3 cut(s) 1099, 1214, 1611
HhaI GCGC 1 cut(s) 1185
Hin6I GCGC 1 cut(s) 1183
HinP1I GCGC 1 cut(s) 1183
HincII GTYRAC 2 cut(s) 744, 1288
HindII GTYRAC 2 cut(s) 744, 1288
HpaII CCGG 3 cut(s) 1099, 1214, 1611
HphI GGTGA 8 cut(s) 428, 1213, 1381, 1578, 1967, 2039, 2153, 2432
Hpy166II GTNNAC 3 cut(s) 744, 1288, 1586
Hpy8I GTNNAC 3 cut(s) 744, 1288, 1586
HpyCH4III ACNGT 9 cut(s) 35, 434, 476, 676, 1227, 1292, 1766, 2071, 2743
HpyF10VI GCNNNNNNNGC 8 cut(s) 305, 791, 871, 1009, 1702, 2353, 2399, 2693
HspAI GCGC 1 cut(s) 1183
Ksp22I TGATCA 6 cut(s) 409, 754, 1140, 1549, 2179, 2227
LmnI GCTCC 6 cut(s) 220, 270, 862, 1418, 2200, 2543
Lsp1109I GCAGC 9 cut(s) 25, 243, 246, 292, 1745, 1798, 1801, 1918, 2405
LweI GCATC 9 cut(s) 173, 202, 1006, 1121, 1270, 1323, 1720, 1798, 2132
MabI ACCWGGT 1 cut(s) 2320
MaeI CTAG 5 cut(s) 261, 509, 621, 858, 1970
MfeI CAATTG 3 cut(s) 125, 997, 2284
MflI RGATCY 5 cut(s) 251, 1109, 1629, 1711, 2035
MhlI GDGCHC 3 cut(s) 1670, 1902, 2548
MlsI TGGCCA 1 cut(s) 838
MluNI TGGCCA 1 cut(s) 838
MlyI GAGTC 6 cut(s) 326, 1171, 1397, 1483, 1505, 1543
Mox20I TGGCCA 1 cut(s) 838
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 109, 2612
MscI TGGCCA 1 cut(s) 838
MseI TTAA 6 cut(s) 696, 831, 1691, 1770, 1917, 2235
MslI CAYNNNNRTG 2 cut(s) 1600, 2569
Msp20I TGGCCA 1 cut(s) 838
MspA1I CMGCKG 1 cut(s) 2396
MspI CCGG 3 cut(s) 1099, 1214, 1611
MspR9I CCNGG 5 cut(s) 826, 1100, 1214, 2115, 2322
MunI CAATTG 3 cut(s) 125, 997, 2284
Mva1269I GAATGC 1 cut(s) 356
MvaI CCWGG 3 cut(s) 826, 2115, 2322
MwoI GCNNNNNNNGC 8 cut(s) 305, 791, 871, 1009, 1702, 2353, 2399, 2693
NciI CCSGG 2 cut(s) 1100, 1214
NlaIV GGNNCC 3 cut(s) 266, 1032, 2202
NmuCI GTSAC 4 cut(s) 434, 1326, 1749, 1955
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1007
NspV TTCGAA 1 cut(s) 185
PctI GAATGC 1 cut(s) 356
PdmI GAANNNNTTC 2 cut(s) 109, 2612
PflMI CCANNNNNTGG 1 cut(s) 976
PkrI GCNGC 9 cut(s) 40, 233, 236, 307, 1735, 1813, 1816, 1933, 2395
PleI GAGTC 6 cut(s) 326, 1170, 1397, 1482, 1504, 1542
PpsI GAGTC 6 cut(s) 326, 1170, 1397, 1482, 1504, 1542
PpuMI RGGWCCY 1 cut(s) 1031
PshBI ATTAAT 1 cut(s) 2235
PsiI TTATAA 1 cut(s) 2676
Psp5II RGGWCCY 1 cut(s) 1031
Psp6I CCWGG 3 cut(s) 824, 2113, 2320
PspEI GGTNACC 1 cut(s) 2316
PspFI CCCAGC 1 cut(s) 1019
PspGI CCWGG 3 cut(s) 824, 2113, 2320
PspN4I GGNNCC 3 cut(s) 266, 1032, 2202
PspPI GGNCC 4 cut(s) 1031, 1762, 2324, 2366
PspPPI RGGWCCY 1 cut(s) 1031
PsrI GAACNNNNNNTAC 2 cut(s) 918, 950
PstNI CAGNNNCTG 2 cut(s) 1231, 1811
PsuI RGATCY 5 cut(s) 251, 1109, 1629, 1711, 2035
PvuII CAGCTG 1 cut(s) 2396
RsaI GTAC 8 cut(s) 316, 380, 431, 962, 1229, 1838, 2454, 2745
RsaNI GTAC 8 cut(s) 315, 379, 430, 961, 1228, 1837, 2453, 2744
RseI CAYNNNNRTG 2 cut(s) 1600, 2569
SaqAI TTAA 6 cut(s) 696, 831, 1691, 1770, 1917, 2235
SatI GCNGC 9 cut(s) 39, 232, 235, 306, 1734, 1812, 1815, 1932, 2394
Sau96I GGNCC 4 cut(s) 1031, 1762, 2324, 2366
ScaI AGTACT 1 cut(s) 962
SchI GAGTC 6 cut(s) 326, 1171, 1397, 1483, 1505, 1543
ScrFI CCNGG 5 cut(s) 826, 1100, 1214, 2115, 2322
SduI GDGCHC 3 cut(s) 1670, 1902, 2548
SexAI ACCWGGT 1 cut(s) 2320
SfaNI GCATC 9 cut(s) 173, 202, 1006, 1121, 1270, 1323, 1720, 1798, 2132
SfcI CTRYAG 1 cut(s) 2739
SfuI TTCGAA 1 cut(s) 185
SinI GGWCC 4 cut(s) 1031, 1762, 2324, 2366
SmiMI CAYNNNNRTG 2 cut(s) 1600, 2569
SspI AATATT 1 cut(s) 1740
SspMI CTAG 5 cut(s) 261, 509, 621, 858, 1970
StyD4I CCNGG 5 cut(s) 824, 1098, 1212, 2113, 2320
StyI CCWWGG 3 cut(s) 456, 2137, 2596
TaaI ACNGT 9 cut(s) 35, 434, 476, 676, 1227, 1292, 1766, 2071, 2743
TaqI TCGA 4 cut(s) 185, 323, 2032, 2053
TatI WGTACW 3 cut(s) 429, 960, 1836
Tru1I TTAA 6 cut(s) 696, 831, 1691, 1770, 1917, 2235
Tru9I TTAA 6 cut(s) 696, 831, 1691, 1770, 1917, 2235
TscAI CASTG 9 cut(s) 38, 96, 679, 977, 1192, 1492, 1752, 1902, 2428
TseFI GTSAC 4 cut(s) 434, 1326, 1749, 1955
TseI GCWGC 9 cut(s) 38, 231, 234, 305, 1733, 1811, 1814, 1931, 2393
Tsp45I GTSAC 4 cut(s) 434, 1326, 1749, 1955
TspGWI ACGGA 1 cut(s) 1837
TspRI CASTG 9 cut(s) 38, 96, 679, 977, 1192, 1492, 1752, 1902, 2428
Van91I CCANNNNNTGG 1 cut(s) 976
VpaK11BI GGWCC 4 cut(s) 1031, 1762, 2324, 2366
VspI ATTAAT 1 cut(s) 2235
XagI CCTNNNNNAGG 2 cut(s) 443, 2331
XapI RAATTY 4 cut(s) 386, 556, 1656, 1863
XceI RCATGY 1 cut(s) 1007
XcmI CCANNNNNNNNNTGG 1 cut(s) 575
XmnI GAANNNNTTC 2 cut(s) 109, 2612
XspI CTAG 5 cut(s) 261, 509, 621, 858, 1970
ZrmI AGTACT 1 cut(s) 962
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.