superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g26130 FvH4_7g26130 FvH4_7g26130 FvH4_7g26130 FvH4_7g26130 |
| malus_domestica | MD08G1039700.v1.1 MD15G1034300.v1.1 |
| prunus_persica | Prupe.1G388400_v2.0.a1 |
| pyrus_communis | pycom08g03190 pycom15g03160 |
| rosa_chinensis | RchiOBHm_Chr1g0372571 |
| rosa_laevigata | RLG00000026890 |
| rosa_multiflora | Rmu_ssc0000419.1_g000012 |
| rosa_roxburghii | Rroxscaffold_4G00284840 |
| rosa_rugosa | Rorug01G0372800 |
| rosa_samantha | Rh1AG381400 Rh1BG344800 Rh1CG358200 Rh1DG376000 |
| rosa_wichuraiana | Rw1G033540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2796 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1048 |
| AclWI | GGATC | 4 cut(s) | 1189, 1476, 1778, 2150 |
| AcoI | YGGCCR | 3 cut(s) | 908, 1142, 2583 |
| AcsI | RAATTY | 6 cut(s) | 458, 628, 1648, 1728, 1935, 2025 |
| AcuI | CTGAAG | 5 cut(s) | 1404, 1540, 1875, 2586, 2722 |
| AfaI | GTAC | 8 cut(s) | 388, 452, 503, 1034, 1301, 1910, 2574, 2865 |
| AfeI | AGCGCT | 1 cut(s) | 372 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 469, 517, 1048, 1843, 1930, 2453, 2569 |
| AjnI | CCWGG | 3 cut(s) | 896, 2233, 2440 |
| AleI | CACNNNNGTG | 1 cut(s) | 1998 |
| AluBI | AGCT | 9 cut(s) | 214, 309, 937, 1702, 1768, 2272, 2516, 2522, 2759 |
| AluI | AGCT | 9 cut(s) | 214, 309, 937, 1702, 1768, 2272, 2516, 2522, 2759 |
| Alw21I | GWGCWC | 1 cut(s) | 2668 |
| Alw26I | GTCTC | 6 cut(s) | 255, 1137, 1451, 2060, 2190, 2280 |
| AlwI | GGATC | 4 cut(s) | 1189, 1476, 1778, 2150 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1303, 1883 |
| Aor51HI | AGCGCT | 1 cut(s) | 372 |
| AoxI | GGCC | 6 cut(s) | 168, 908, 1026, 1142, 2444, 2583 |
| ApoI | RAATTY | 6 cut(s) | 458, 628, 1648, 1728, 1935, 2025 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 449, 481, 2470, 2502 |
| AseI | ATTAAT | 1 cut(s) | 2355 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 181, 2732 |
| AspLEI | GCGC | 2 cut(s) | 373, 1257 |
| AspS9I | GGNCC | 5 cut(s) | 1026, 1103, 1834, 2444, 2486 |
| AsuC2I | CCSGG | 2 cut(s) | 1172, 1286 |
| AsuHPI | GGTGA | 7 cut(s) | 500, 1285, 1453, 2087, 2159, 2273, 2552 |
| AsuII | TTCGAA | 1 cut(s) | 257 |
| AvaII | GGWCC | 3 cut(s) | 1103, 1834, 2486 |
| AxyI | CCTNAGG | 2 cut(s) | 1107, 1891 |
| BalI | TGGCCA | 1 cut(s) | 910 |
| BanII | GRGCYC | 1 cut(s) | 1742 |
| BbsI | GAAGAC | 2 cut(s) | 137, 459 |
| Bbv12I | GWGCWC | 1 cut(s) | 2668 |
| BciT130I | CCWGG | 3 cut(s) | 898, 2235, 2442 |
| BciVI | GTATCC | 1 cut(s) | 2627 |
| BclI | TGATCA | 6 cut(s) | 481, 826, 1212, 1621, 2299, 2347 |
| BcnI | CCSGG | 2 cut(s) | 1172, 1286 |
| BcoDI | GTCTC | 6 cut(s) | 255, 1137, 1451, 2060, 2190, 2280 |
| BfaI | CTAG | 6 cut(s) | 333, 581, 693, 930, 1725, 2090 |
| BfmI | CTRYAG | 2 cut(s) | 2517, 2859 |
| BfoI | RGCGCY | 1 cut(s) | 374 |
| BfuI | GTATCC | 1 cut(s) | 2627 |
| BglII | AGATCT | 1 cut(s) | 323 |
| BlpI | GCTNAGC | 1 cut(s) | 1059 |
| BmcAI | AGTACT | 1 cut(s) | 1034 |
| Bme1390I | CCNGG | 5 cut(s) | 898, 1172, 1286, 2235, 2442 |
| Bme18I | GGWCC | 3 cut(s) | 1103, 1834, 2486 |
| BmgT120I | GGNCC | 5 cut(s) | 1026, 1103, 1834, 2444, 2486 |
| BmiI | GGNNCC | 4 cut(s) | 338, 1027, 1104, 2322 |
| BmrFI | CCNGG | 5 cut(s) | 898, 1172, 1286, 2235, 2442 |
| BmrI | ACTGGG | 4 cut(s) | 28, 996, 1032, 1968 |
| BmuI | ACTGGG | 4 cut(s) | 28, 996, 1032, 1968 |
| BpiI | GAAGAC | 2 cut(s) | 137, 459 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 653, 685 |
| BpmI | CTGGAG | 1 cut(s) | 2256 |
| Bpu10I | CCTNAGC | 3 cut(s) | 215, 882, 2649 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1059 |
| Bpu14I | TTCGAA | 1 cut(s) | 257 |
| BpuMI | CCSGG | 2 cut(s) | 1172, 1286 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2154 |
| BsaI | GGTCTC | 1 cut(s) | 255 |
| BsaJI | CCNNGG | 6 cut(s) | 528, 1572, 2190, 2257, 2441, 2716 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2277, 2307 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 469, 517, 1048, 1843, 1930, 2453, 2569 |
| Bse21I | CCTNAGG | 2 cut(s) | 1107, 1891 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2154 |
| BseBI | CCWGG | 3 cut(s) | 898, 2235, 2442 |
| BseDI | CCNNGG | 6 cut(s) | 528, 1572, 2190, 2257, 2441, 2716 |
| BseGI | GGATG | 6 cut(s) | 858, 1053, 1208, 1324, 1492, 2854 |
| BseJI | GATNNNNATC | 1 cut(s) | 2154 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 469, 517, 1048, 1843, 1930, 2453, 2569 |
| BseRI | GAGGAG | 2 cut(s) | 1696, 2329 |
| BseX3I | CGGCCG | 1 cut(s) | 1142 |
| BseYI | CCCAGC | 1 cut(s) | 1091 |
| BsgI | GTGCAG | 1 cut(s) | 53 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1145 |
| BshFI | GGCC | 6 cut(s) | 170, 910, 1028, 1144, 2446, 2585 |
| BsiEI | CGRYCG | 1 cut(s) | 1145 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2668 |
| BsiSI | CCGG | 3 cut(s) | 1145, 1171, 1286 |
| BslFI | GGGAC | 1 cut(s) | 1593 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 469, 517, 1048, 1843, 1930, 2453, 2569 |
| BsmAI | GTCTC | 6 cut(s) | 255, 1137, 1451, 2060, 2190, 2280 |
| BsmFI | GGGAC | 1 cut(s) | 1593 |
| BsmI | GAATGC | 1 cut(s) | 428 |
| BsnI | GGCC | 6 cut(s) | 170, 910, 1028, 1144, 2446, 2585 |
| Bso31I | GGTCTC | 1 cut(s) | 255 |
| Bsp119I | TTCGAA | 1 cut(s) | 257 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1742, 2668 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1059 |
| BspANI | GGCC | 6 cut(s) | 170, 910, 1028, 1144, 2446, 2585 |
| BspHI | TCATGA | 1 cut(s) | 829 |
| BspLI | GGNNCC | 4 cut(s) | 338, 1027, 1104, 2322 |
| BspPI | GGATC | 4 cut(s) | 1189, 1476, 1778, 2150 |
| BspT104I | TTCGAA | 1 cut(s) | 257 |
| BspTNI | GGTCTC | 1 cut(s) | 255 |
| BssECI | CCNNGG | 6 cut(s) | 528, 1572, 2190, 2257, 2441, 2716 |
| BssT1I | CCWWGG | 3 cut(s) | 528, 2257, 2716 |
| Bst2UI | CCWGG | 3 cut(s) | 898, 2235, 2442 |
| Bst6I | CTCTTC | 3 cut(s) | 1538, 1854, 2136 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1081 |
| BstBI | TTCGAA | 1 cut(s) | 257 |
| BstC8I | GCNNGC | 5 cut(s) | 375, 1410, 1495, 1700, 2696 |
| BstDSI | CCRYGG | 1 cut(s) | 2190 |
| BstEII | GGTNACC | 1 cut(s) | 2436 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 515, 2451 |
| BstF5I | GGATG | 6 cut(s) | 858, 1053, 1208, 1324, 1492, 2854 |
| BstH2I | RGCGCY | 1 cut(s) | 374 |
| BstHHI | GCGC | 2 cut(s) | 373, 1257 |
| BstMAI | GTCTC | 6 cut(s) | 255, 1137, 1451, 2060, 2190, 2280 |
| BstMCI | CGRYCG | 1 cut(s) | 1145 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 377, 863, 943, 1081, 1774, 2473, 2519, 2813 |
| BstNI | CCWGG | 3 cut(s) | 898, 2235, 2442 |
| BstNSI | RCATGY | 1 cut(s) | 1079 |
| BstPI | GGTNACC | 1 cut(s) | 2436 |
| BstSCI | CCNGG | 5 cut(s) | 896, 1170, 1284, 2233, 2440 |
| BstSFI | CTRYAG | 2 cut(s) | 2517, 2859 |
| BstV2I | GAAGAC | 2 cut(s) | 137, 459 |
| BstX2I | RGATCY | 4 cut(s) | 323, 1181, 1783, 2155 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1674 |
| BstYI | RGATCY | 4 cut(s) | 323, 1181, 1783, 2155 |
| BstZI | CGGCCG | 1 cut(s) | 1142 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1107, 1891 |
| BsuI | GTATCC | 1 cut(s) | 2627 |
| BsuRI | GGCC | 6 cut(s) | 170, 910, 1028, 1144, 2446, 2585 |
| BtgI | CCRYGG | 1 cut(s) | 2190 |
| BtsCI | GGATG | 6 cut(s) | 858, 1053, 1208, 1324, 1492, 2854 |
| BtsI | GCAGTG | 1 cut(s) | 2548 |
| Cac8I | GCNNGC | 5 cut(s) | 375, 1410, 1495, 1700, 2696 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1303, 1883 |
| CciI | TCATGA | 1 cut(s) | 829 |
| CfoI | GCGC | 2 cut(s) | 373, 1257 |
| Cfr13I | GGNCC | 5 cut(s) | 1026, 1103, 1834, 2444, 2486 |
| Csp6I | GTAC | 8 cut(s) | 387, 451, 502, 1033, 1300, 1909, 2573, 2864 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 355, 390 |
| CviQI | GTAC | 8 cut(s) | 387, 451, 502, 1033, 1300, 1909, 2573, 2864 |
| DraI | TTTAAA | 2 cut(s) | 769, 904 |
| EaeI | YGGCCR | 3 cut(s) | 908, 1142, 2583 |
| EagI | CGGCCG | 1 cut(s) | 1142 |
| Eam1104I | CTCTTC | 3 cut(s) | 1538, 1854, 2136 |
| EarI | CTCTTC | 3 cut(s) | 1538, 1854, 2136 |
| EclXI | CGGCCG | 1 cut(s) | 1142 |
| Eco130I | CCWWGG | 3 cut(s) | 528, 2257, 2716 |
| Eco24I | GRGCYC | 1 cut(s) | 1742 |
| Eco31I | GGTCTC | 1 cut(s) | 255 |
| Eco32I | GATATC | 2 cut(s) | 685, 2214 |
| Eco47I | GGWCC | 3 cut(s) | 1103, 1834, 2486 |
| Eco47III | AGCGCT | 1 cut(s) | 372 |
| Eco52I | CGGCCG | 1 cut(s) | 1142 |
| Eco57I | CTGAAG | 5 cut(s) | 1404, 1540, 1875, 2586, 2722 |
| Eco81I | CCTNAGG | 2 cut(s) | 1107, 1891 |
| Eco91I | GGTNACC | 1 cut(s) | 2436 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 515, 2451 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1103 |
| EcoO65I | GGTNACC | 1 cut(s) | 2436 |
| EcoRI | GAATTC | 2 cut(s) | 1648, 1728 |
| EcoRII | CCWGG | 3 cut(s) | 896, 2233, 2440 |
| EcoRV | GATATC | 2 cut(s) | 685, 2214 |
| EcoT14I | CCWWGG | 3 cut(s) | 528, 2257, 2716 |
| EcoT22I | ATGCAT | 1 cut(s) | 78 |
| EcoT38I | GRGCYC | 1 cut(s) | 1742 |
| ErhI | CCWWGG | 3 cut(s) | 528, 2257, 2716 |
| FaqI | GGGAC | 1 cut(s) | 1593 |
| FbaI | TGATCA | 6 cut(s) | 481, 826, 1212, 1621, 2299, 2347 |
| FokI | GGATG | 6 cut(s) | 865, 1060, 1215, 1331, 1499, 2861 |
| FriOI | GRGCYC | 1 cut(s) | 1742 |
| FspBI | CTAG | 6 cut(s) | 333, 581, 693, 930, 1725, 2090 |
| GlaI | GCGC | 2 cut(s) | 372, 1256 |
| GsaI | CCCAGC | 1 cut(s) | 1095 |
| GsuI | CTGGAG | 1 cut(s) | 2256 |
| HaeII | RGCGCY | 1 cut(s) | 374 |
| HaeIII | GGCC | 6 cut(s) | 170, 910, 1028, 1144, 2446, 2585 |
| HapII | CCGG | 3 cut(s) | 1145, 1171, 1286 |
| HhaI | GCGC | 2 cut(s) | 373, 1257 |
| Hin6I | GCGC | 2 cut(s) | 371, 1255 |
| HinP1I | GCGC | 2 cut(s) | 371, 1255 |
| HincII | GTYRAC | 2 cut(s) | 816, 1360 |
| HindII | GTYRAC | 2 cut(s) | 816, 1360 |
| HpaII | CCGG | 3 cut(s) | 1145, 1171, 1286 |
| HphI | GGTGA | 7 cut(s) | 500, 1285, 1453, 2087, 2159, 2273, 2552 |
| Hpy166II | GTNNAC | 2 cut(s) | 816, 1360 |
| Hpy8I | GTNNAC | 2 cut(s) | 816, 1360 |
| HpyAV | CCTTC | 9 cut(s) | 132, 192, 309, 967, 2066, 2091, 2276, 2447, 2837 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 377, 863, 943, 1081, 1774, 2473, 2519, 2813 |
| HspAI | GCGC | 2 cut(s) | 371, 1255 |
| Ksp22I | TGATCA | 6 cut(s) | 481, 826, 1212, 1621, 2299, 2347 |
| LmnI | GCTCC | 6 cut(s) | 292, 342, 934, 1490, 2320, 2663 |
| MaeI | CTAG | 6 cut(s) | 333, 581, 693, 930, 1725, 2090 |
| MfeI | CAATTG | 3 cut(s) | 197, 1069, 2404 |
| MflI | RGATCY | 4 cut(s) | 323, 1181, 1783, 2155 |
| MhlI | GDGCHC | 2 cut(s) | 1742, 2668 |
| MlsI | TGGCCA | 1 cut(s) | 910 |
| MluNI | TGGCCA | 1 cut(s) | 910 |
| MlyI | GAGTC | 7 cut(s) | 398, 971, 1243, 1469, 1555, 1577, 1615 |
| MmeI | TCCRAC | 1 cut(s) | 2318 |
| Mox20I | TGGCCA | 1 cut(s) | 910 |
| Mph1103I | ATGCAT | 1 cut(s) | 78 |
| MroXI | GAANNNNTTC | 2 cut(s) | 181, 2732 |
| MscI | TGGCCA | 1 cut(s) | 910 |
| MseI | TTAA | 7 cut(s) | 44, 768, 903, 1763, 1842, 1989, 2355 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1672, 1998, 2689 |
| Msp20I | TGGCCA | 1 cut(s) | 910 |
| MspA1I | CMGCKG | 1 cut(s) | 2516 |
| MspI | CCGG | 3 cut(s) | 1145, 1171, 1286 |
| MspR9I | CCNGG | 5 cut(s) | 898, 1172, 1286, 2235, 2442 |
| MunI | CAATTG | 3 cut(s) | 197, 1069, 2404 |
| Mva1269I | GAATGC | 1 cut(s) | 428 |
| MvaI | CCWGG | 3 cut(s) | 898, 2235, 2442 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 377, 863, 943, 1081, 1774, 2473, 2519, 2813 |
| NciI | CCSGG | 2 cut(s) | 1172, 1286 |
| NlaIV | GGNNCC | 4 cut(s) | 338, 1027, 1104, 2322 |
| NmuCI | GTSAC | 4 cut(s) | 506, 1398, 1821, 2075 |
| NsiI | ATGCAT | 1 cut(s) | 78 |
| NspI | RCATGY | 1 cut(s) | 1079 |
| NspV | TTCGAA | 1 cut(s) | 257 |
| OliI | CACNNNNGTG | 1 cut(s) | 1998 |
| PagI | TCATGA | 1 cut(s) | 829 |
| PctI | GAATGC | 1 cut(s) | 428 |
| PdmI | GAANNNNTTC | 2 cut(s) | 181, 2732 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1048 |
| PleI | GAGTC | 7 cut(s) | 398, 971, 1242, 1469, 1554, 1576, 1614 |
| PpsI | GAGTC | 7 cut(s) | 398, 971, 1242, 1469, 1554, 1576, 1614 |
| PpuMI | RGGWCCY | 1 cut(s) | 1103 |
| PshBI | ATTAAT | 1 cut(s) | 2355 |
| PsiI | TTATAA | 1 cut(s) | 2796 |
| Psp5II | RGGWCCY | 1 cut(s) | 1103 |
| Psp6I | CCWGG | 3 cut(s) | 896, 2233, 2440 |
| PspEI | GGTNACC | 1 cut(s) | 2436 |
| PspFI | CCCAGC | 1 cut(s) | 1091 |
| PspGI | CCWGG | 3 cut(s) | 896, 2233, 2440 |
| PspN4I | GGNNCC | 4 cut(s) | 338, 1027, 1104, 2322 |
| PspPI | GGNCC | 5 cut(s) | 1026, 1103, 1834, 2444, 2486 |
| PspPPI | RGGWCCY | 1 cut(s) | 1103 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 990, 1022 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1303, 1883 |
| PsuI | RGATCY | 4 cut(s) | 323, 1181, 1783, 2155 |
| PvuII | CAGCTG | 1 cut(s) | 2516 |
| RsaI | GTAC | 8 cut(s) | 388, 452, 503, 1034, 1301, 1910, 2574, 2865 |
| RsaNI | GTAC | 8 cut(s) | 387, 451, 502, 1033, 1300, 1909, 2573, 2864 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1672, 1998, 2689 |
| SaqAI | TTAA | 7 cut(s) | 44, 768, 903, 1763, 1842, 1989, 2355 |
| Sau96I | GGNCC | 5 cut(s) | 1026, 1103, 1834, 2444, 2486 |
| ScaI | AGTACT | 1 cut(s) | 1034 |
| SchI | GAGTC | 7 cut(s) | 398, 971, 1243, 1469, 1555, 1577, 1615 |
| ScrFI | CCNGG | 5 cut(s) | 898, 1172, 1286, 2235, 2442 |
| SduI | GDGCHC | 2 cut(s) | 1742, 2668 |
| SfcI | CTRYAG | 2 cut(s) | 2517, 2859 |
| SfuI | TTCGAA | 1 cut(s) | 257 |
| SinI | GGWCC | 3 cut(s) | 1103, 1834, 2486 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1672, 1998, 2689 |
| SspMI | CTAG | 6 cut(s) | 333, 581, 693, 930, 1725, 2090 |
| StyD4I | CCNGG | 5 cut(s) | 896, 1170, 1284, 2233, 2440 |
| StyI | CCWWGG | 3 cut(s) | 528, 2257, 2716 |
| TaqI | TCGA | 3 cut(s) | 257, 395, 2152 |
| TatI | WGTACW | 3 cut(s) | 501, 1032, 1908 |
| Tru1I | TTAA | 7 cut(s) | 44, 768, 903, 1763, 1842, 1989, 2355 |
| Tru9I | TTAA | 7 cut(s) | 44, 768, 903, 1763, 1842, 1989, 2355 |
| TseFI | GTSAC | 4 cut(s) | 506, 1398, 1821, 2075 |
| Tsp45I | GTSAC | 4 cut(s) | 506, 1398, 1821, 2075 |
| TspGWI | ACGGA | 2 cut(s) | 1909, 1913 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1048 |
| VpaK11BI | GGWCC | 3 cut(s) | 1103, 1834, 2486 |
| VspI | ATTAAT | 1 cut(s) | 2355 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 515, 2451 |
| XapI | RAATTY | 6 cut(s) | 458, 628, 1648, 1728, 1935, 2025 |
| XbaI | TCTAGA | 1 cut(s) | 1724 |
| XceI | RCATGY | 1 cut(s) | 1079 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 647 |
| XmnI | GAANNNNTTC | 2 cut(s) | 181, 2732 |
| XspI | CTAG | 6 cut(s) | 333, 581, 693, 930, 1725, 2090 |
| ZrmI | AGTACT | 1 cut(s) | 1034 |
| Zsp2I | ATGCAT | 1 cut(s) | 78 |