Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0016768

Physical Location & Seq

Genomic Coordinates Forward (+)

36037250 .. 36038443

Gene Structure 1194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G413800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGGCGGGGCTGGTCGTTGTTTTTGACTTTGACAAGACGATCATTGACTGGGATAGCGACAACTGGGTTGTGGAGGAGTTGGGTGTCAAAGACTTGTTCACTCAGCTCCTCCCTACCATGCCTTGGAACTCTCTTATGGATAGAATGATGAGGGAGCTTCATTCTCGTGGAATGACAATTGAGGACATTGCAGAATGTTTAAAGAAGATTCCACTGCATCCCAACATTGCCTCTGCAATCAAATCAGCCCATGCTTTTGGGTGTGATCTGAGGGTGTTAAGTGCTGCAAATGAATTTTTCATAGACACAATATTGAAGCATCATGGGCTAATGGATTGTTTCTCAGAAATCAACACCAACCCAAGCATTATTGATGAACAGGGCAGGCTTAGAATCTTTCCCTACCATGATTTCCACTCATCTTCTCATGGCTGTACCATTTGCCCTCCCAGCATGTGCAAGGGTCTAATAATGGAAAAGATCCAAGCTTCTGTTGCAGCAGATGGGAAGAAACATAAACAGTTCATCTATGTTGGGGATGGAGCTCCTGATTTTTGCGCAGGTTTGAAGCTTGAAGAAGGAGATTTTCTGATGCCAAGGAGGGATTTTCCTATCTGGGACTTAATTTCTGCCAATCCATTGTTTACCAAGGCAAAAATTTACGAATGGAATGAGTGTGATGAGCTTGGGGCTGTCTTGCTCAACACAGTTAATGCATTCTTCACTGAAAACAAGTCGAGGTCAACTGATCAATTGGTTCCAGTTGACTGTAAGTCTCAAAACAGTTCGACCTGTCTCACTGCCCATGAAGCCTTTCAAAATGCTCTCCCAGTTCCACTTCCTCGCCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0004427 GO:0006725 GO:0006732 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009229 GO:0009987 GO:0016043 GO:0016311 GO:0016462 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0018130 GO:0019438 GO:0019637 GO:0022607 GO:0034641 GO:0042131 GO:0042357 GO:0042578 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0046483 GO:0051186 GO:0051188 GO:0051259 GO:0051262 GO:0065003 GO:0071704 GO:0071840 GO:0072527 GO:0072528 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00564 ko00750 ko01100 map00564 map00750 map01100

Pfam Domains

Protein Families

Put_Phosphatase

Protein Analysis

284

Amino Acids

31.82

Weight (kDa)

5.24

Isoelectric Point (pI)

40.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016768)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g32070
malus_domestica	MD15G1061100.v1.1
prunus_persica	Prupe.1G413800_v2.0.a1
pyrus_communis	pycom15g05720
rosa_chinensis	RchiOBHm_Chr6g0310671
rosa_laevigata	RLG00000010467
rosa_multiflora	Rmu_sc0002546.1_g000002
rosa_roxburghii	Rroxscaffold_7G00158360
rosa_rugosa	Rorug06G0382100
rosa_samantha	Rh6AG496100 Rh6BG505600 Rh6CG511300 Rh6DG497000
rosa_wichuraiana	Rw6G043140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	559
Acc36I	ACCTGC	1 cut(s)	551
AccB7I	CCANNNNNTGG	1 cut(s)	123
AciI	CCGC	1 cut(s)	5
AclWI	GGATC	1 cut(s)	475
AcsI	RAATTY	2 cut(s)	293, 657
AfaI	GTAC	1 cut(s)	436
AfiI	CCNNNNNNNGG	1 cut(s)	123
AgsI	TTSAA	4 cut(s)	316, 568, 575, 818
AhdI	GACNNNNNGTC	1 cut(s)	772
AluBI	AGCT	6 cut(s)	106, 157, 488, 545, 571, 685
AluI	AGCT	6 cut(s)	106, 157, 488, 545, 571, 685
Alw21I	GWGCWC	1 cut(s)	547
Alw26I	GTCTC	2 cut(s)	780, 800
AlwI	GGATC	1 cut(s)	475
ApeKI	GCWGC	2 cut(s)	284, 497
ApoI	RAATTY	2 cut(s)	293, 657
Asp700I	GAANNNNTTC	1 cut(s)	813
AspLEI	GCGC	1 cut(s)	560
BanII	GRGCYC	1 cut(s)	547
BauI	CACGAG	1 cut(s)	165
Bbv12I	GWGCWC	1 cut(s)	547
BbvI	GCAGC	2 cut(s)	271, 509
BccI	CCATC	2 cut(s)	497, 533
BclI	TGATCA	1 cut(s)	748
BcoDI	GTCTC	2 cut(s)	780, 800
BfuAI	ACCTGC	1 cut(s)	551
BisI	GCNGC	2 cut(s)	285, 498
BlsI	GCNGC	2 cut(s)	286, 499
BmeRI	GACNNNNNGTC	1 cut(s)	772
BmiI	GGNNCC	1 cut(s)	759
BmrI	ACTGGG	3 cut(s)	58, 73, 824
BmsI	GCATC	3 cut(s)	226, 328, 582
BmuI	ACTGGG	3 cut(s)	58, 73, 824
BsaJI	CCNNGG	3 cut(s)	122, 596, 648
Bsc4I	CCNNNNNNNGG	1 cut(s)	123
Bse1I	ACTGG	5 cut(s)	53, 68, 761, 830, 847
Bse3DI	GCAATG	2 cut(s)	186, 225
BseDI	CCNNGG	3 cut(s)	122, 596, 648
BseGI	GGATG	2 cut(s)	217, 544
BseLI	CCNNNNNNNGG	1 cut(s)	123
BseMI	GCAATG	2 cut(s)	186, 225
BseMII	CTCAG	3 cut(s)	116, 260, 357
BseNI	ACTGG	5 cut(s)	53, 68, 761, 830, 847
BseRI	GAGGAG	2 cut(s)	89, 98
BseXI	GCAGC	2 cut(s)	271, 509
BseYI	CCCAGC	1 cut(s)	449
BsiHKAI	GWGCWC	1 cut(s)	547
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	1 cut(s)	123
BsmAI	GTCTC	2 cut(s)	780, 800
BsmFI	GGGAC	1 cut(s)	632
BsmI	GAATGC	1 cut(s)	716
Bsp1286I	GDGCHC	1 cut(s)	547
Bsp143I	GATC	4 cut(s)	39, 265, 480, 748
BspACI	CCGC	1 cut(s)	5
BspCNI	CTCAG	3 cut(s)	115, 261, 356
BspLI	GGNNCC	1 cut(s)	759
BspMI	ACCTGC	1 cut(s)	551
BspPI	GGATC	1 cut(s)	475
BsrDI	GCAATG	2 cut(s)	186, 225
BsrI	ACTGG	5 cut(s)	53, 68, 761, 830, 847
BssECI	CCNNGG	3 cut(s)	122, 596, 648
BssMI	GATC	4 cut(s)	39, 265, 480, 748
BssSI	CACGAG	1 cut(s)	165
BssT1I	CCWWGG	3 cut(s)	122, 596, 648
Bst2BI	CACGAG	1 cut(s)	165
Bst4CI	ACNGT	4 cut(s)	522, 709, 770, 785
BstC8I	GCNNGC	1 cut(s)	386
BstDEI	CTNAG	4 cut(s)	102, 269, 343, 389
BstF5I	GGATG	2 cut(s)	217, 544
BstHHI	GCGC	1 cut(s)	560
BstKTI	GATC	4 cut(s)	42, 268, 483, 751
BstMAI	GTCTC	2 cut(s)	780, 800
BstMBI	GATC	4 cut(s)	39, 265, 480, 748
BstMWI	GCNNNNNNNGC	4 cut(s)	325, 450, 494, 809
BstNSI	RCATGY	1 cut(s)	457
BstV1I	GCAGC	2 cut(s)	271, 509
BstX2I	RGATCY	1 cut(s)	480
BstXI	CCANNNNNNTGG	1 cut(s)	257
BstYI	RGATCY	1 cut(s)	480
BtsCI	GGATG	2 cut(s)	217, 544
BtsI	GCAGTG	2 cut(s)	212, 798
BtsIMutI	CAGTG	3 cut(s)	212, 723, 798
BveI	ACCTGC	1 cut(s)	551
Cac8I	GCNNGC	1 cut(s)	386
CfoI	GCGC	1 cut(s)	560
Csp6I	GTAC	1 cut(s)	435
CviAII	CATG	7 cut(s)	118, 251, 323, 407, 428, 454, 806
CviQI	GTAC	1 cut(s)	435
DdeI	CTNAG	4 cut(s)	102, 269, 343, 389
DpnI	GATC	4 cut(s)	41, 267, 482, 750
DpnII	GATC	4 cut(s)	39, 265, 480, 748
DraI	TTTAAA	1 cut(s)	201
DriI	GACNNNNNGTC	1 cut(s)	772
Eam1105I	GACNNNNNGTC	1 cut(s)	772
Ecl136II	GAGCTC	1 cut(s)	545
Eco130I	CCWWGG	3 cut(s)	122, 596, 648
Eco24I	GRGCYC	1 cut(s)	547
Eco53kI	GAGCTC	1 cut(s)	545
EcoICRI	GAGCTC	1 cut(s)	545
EcoT14I	CCWWGG	3 cut(s)	122, 596, 648
EcoT22I	ATGCAT	1 cut(s)	718
EcoT38I	GRGCYC	1 cut(s)	547
ErhI	CCWWGG	3 cut(s)	122, 596, 648
FaeI	CATG	7 cut(s)	121, 254, 326, 410, 431, 457, 809
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	7 cut(s)	117, 250, 322, 406, 427, 453, 805
FbaI	TGATCA	1 cut(s)	748
Fnu4HI	GCNGC	2 cut(s)	285, 498
FokI	GGATG	2 cut(s)	204, 551
FriOI	GRGCYC	1 cut(s)	547
Fsp4HI	GCNGC	2 cut(s)	285, 498
FspI	TGCGCA	1 cut(s)	559
GlaI	GCGC	1 cut(s)	559
GluI	GCNGC	2 cut(s)	285, 498
GsaI	CCCAGC	1 cut(s)	453
HhaI	GCGC	1 cut(s)	560
Hin1II	CATG	7 cut(s)	121, 254, 326, 410, 431, 457, 809
Hin6I	GCGC	1 cut(s)	558
HinP1I	GCGC	1 cut(s)	558
HincII	GTYRAC	2 cut(s)	744, 766
HindII	GTYRAC	2 cut(s)	744, 766
HindIII	AAGCTT	2 cut(s)	486, 569
HinfI	GANTC	2 cut(s)	208, 393
Hpy166II	GTNNAC	4 cut(s)	99, 645, 744, 766
Hpy188I	TCNGA	3 cut(s)	270, 346, 591
Hpy188III	TCNNGA	1 cut(s)	548
Hpy8I	GTNNAC	4 cut(s)	99, 645, 744, 766
HpyAV	CCTTC	1 cut(s)	572
HpyCH4III	ACNGT	4 cut(s)	522, 709, 770, 785
HpyCH4V	TGCA	7 cut(s)	191, 217, 236, 287, 459, 497, 716
HpyF10VI	GCNNNNNNNGC	4 cut(s)	325, 450, 494, 809
HpyF3I	CTNAG	4 cut(s)	102, 269, 343, 389
Hsp92II	CATG	7 cut(s)	121, 254, 326, 410, 431, 457, 809
HspAI	GCGC	1 cut(s)	558
Ksp22I	TGATCA	1 cut(s)	748
Kzo9I	GATC	4 cut(s)	39, 265, 480, 748
LmnI	GCTCC	4 cut(s)	111, 154, 542, 550
Lsp1109I	GCAGC	2 cut(s)	271, 509
LweI	GCATC	3 cut(s)	226, 328, 582
MalI	GATC	4 cut(s)	41, 267, 482, 750
MboI	GATC	4 cut(s)	39, 265, 480, 748
MboII	GAAGA	5 cut(s)	217, 414, 520, 587, 712
MfeI	CAATTG	2 cut(s)	177, 752
MflI	RGATCY	1 cut(s)	480
MhlI	GDGCHC	1 cut(s)	547
MluCI	AATT	5 cut(s)	177, 293, 624, 657, 752
Mph1103I	ATGCAT	1 cut(s)	718
MroXI	GAANNNNTTC	1 cut(s)	813
MseI	TTAA	4 cut(s)	200, 278, 623, 711
MslI	CAYNNNNRTG	1 cut(s)	165
MunI	CAATTG	2 cut(s)	177, 752
Mva1269I	GAATGC	1 cut(s)	716
MwoI	GCNNNNNNNGC	4 cut(s)	325, 450, 494, 809
NdeII	GATC	4 cut(s)	39, 265, 480, 748
NlaIII	CATG	7 cut(s)	121, 254, 326, 410, 431, 457, 809
NlaIV	GGNNCC	1 cut(s)	759
NsbI	TGCGCA	1 cut(s)	559
NsiI	ATGCAT	1 cut(s)	718
NspI	RCATGY	1 cut(s)	457
PctI	GAATGC	1 cut(s)	716
PdmI	GAANNNNTTC	1 cut(s)	813
PfeI	GAWTC	2 cut(s)	208, 393
PflMI	CCANNNNNTGG	1 cut(s)	123
PkrI	GCNGC	2 cut(s)	286, 499
Psp124BI	GAGCTC	1 cut(s)	547
PspFI	CCCAGC	1 cut(s)	449
PspN4I	GGNNCC	1 cut(s)	759
PsuI	RGATCY	1 cut(s)	480
RsaI	GTAC	1 cut(s)	436
RsaNI	GTAC	1 cut(s)	435
RseI	CAYNNNNRTG	1 cut(s)	165
SacI	GAGCTC	1 cut(s)	547
SaqAI	TTAA	4 cut(s)	200, 278, 623, 711
SatI	GCNGC	2 cut(s)	285, 498
Sau3AI	GATC	4 cut(s)	39, 265, 480, 748
SduI	GDGCHC	1 cut(s)	547
SetI	ASST	9 cut(s)	108, 159, 490, 547, 565, 573, 687, 743, 794
SfaNI	GCATC	3 cut(s)	226, 328, 582
SmiMI	CAYNNNNRTG	1 cut(s)	165
Sse9I	AATT	5 cut(s)	177, 293, 624, 657, 752
SsiI	CCGC	1 cut(s)	5
SspI	AATATT	1 cut(s)	312
SstI	GAGCTC	1 cut(s)	547
StyI	CCWWGG	3 cut(s)	122, 596, 648
TaaI	ACNGT	4 cut(s)	522, 709, 770, 785
TaqI	TCGA	2 cut(s)	737, 788
TasI	AATT	5 cut(s)	177, 293, 624, 657, 752
TfiI	GAWTC	2 cut(s)	208, 393
Tru1I	TTAA	4 cut(s)	200, 278, 623, 711
Tru9I	TTAA	4 cut(s)	200, 278, 623, 711
TscAI	CASTG	3 cut(s)	219, 730, 805
TseI	GCWGC	2 cut(s)	284, 497
TspDTI	ATGAA	6 cut(s)	149, 289, 306, 390, 514, 822
TspRI	CASTG	3 cut(s)	219, 730, 805
Van91I	CCANNNNNTGG	1 cut(s)	123
XapI	RAATTY	2 cut(s)	293, 657
XceI	RCATGY	1 cut(s)	457
XmnI	GAANNNNTTC	1 cut(s)	813
Zsp2I	ATGCAT	1 cut(s)	718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.