Aminotransferase class I and II
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08040 |
| fragaria_vesca | FvH4_2g32470 FvH4_3g04180 |
| malus_domestica | MD08G1076500.v1.1 MD15G1145400.v1.1 |
| prunus_persica | Prupe.1G417800_v2.0.a1 |
| pyrus_communis | pycom08g06340 |
| rosa_chinensis | RchiOBHm_Chr6g0310191 |
| rosa_laevigata | RLG00000010501 |
| rosa_multiflora | Rmu_sc0008163.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00158760 |
| rosa_rugosa | Rorug06G0378100 |
| rosa_samantha | Rh6BG501800 Rh6CG506800 Rh6DG492900 |
| rosa_wichuraiana | Rw6G042830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1167 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1381 |
| AccII | CGCG | 1 cut(s) | 861 |
| AciI | CCGC | 3 cut(s) | 371, 859, 951 |
| AclWI | GGATC | 5 cut(s) | 161, 285, 298, 395, 897 |
| AcsI | RAATTY | 5 cut(s) | 56, 395, 632, 1031, 1229 |
| AdeI | CACNNNGTG | 1 cut(s) | 871 |
| AfaI | GTAC | 1 cut(s) | 875 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 886, 1381 |
| AflII | CTTAAG | 1 cut(s) | 527 |
| AflIII | ACRYGT | 1 cut(s) | 1305 |
| AjnI | CCWGG | 2 cut(s) | 508, 1249 |
| AluBI | AGCT | 9 cut(s) | 72, 274, 307, 355, 412, 709, 972, 1196, 1207 |
| AluI | AGCT | 9 cut(s) | 72, 274, 307, 355, 412, 709, 972, 1196, 1207 |
| Alw21I | GWGCWC | 1 cut(s) | 420 |
| Alw26I | GTCTC | 3 cut(s) | 440, 988, 1390 |
| AlwI | GGATC | 5 cut(s) | 161, 285, 298, 395, 897 |
| Ama87I | CYCGRG | 1 cut(s) | 1322 |
| AoxI | GGCC | 2 cut(s) | 895, 1347 |
| ApeKI | GCWGC | 1 cut(s) | 953 |
| ApoI | RAATTY | 5 cut(s) | 56, 395, 632, 1031, 1229 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 552 |
| AspA2I | CCTAGG | 1 cut(s) | 133 |
| AspLEI | GCGC | 2 cut(s) | 537, 598 |
| AspS9I | GGNCC | 1 cut(s) | 1348 |
| AsuC2I | CCSGG | 4 cut(s) | 260, 474, 903, 1278 |
| AsuHPI | GGTGA | 1 cut(s) | 1364 |
| AsuNHI | GCTAGC | 1 cut(s) | 68 |
| AvaI | CYCGRG | 1 cut(s) | 1322 |
| AvrII | CCTAGG | 1 cut(s) | 133 |
| BamHI | GGATCC | 1 cut(s) | 290 |
| BanI | GGYRCC | 1 cut(s) | 1167 |
| BanII | GRGCYC | 4 cut(s) | 474, 628, 1239, 1362 |
| BauI | CACGAG | 1 cut(s) | 413 |
| BbsI | GAAGAC | 2 cut(s) | 775, 846 |
| Bbv12I | GWGCWC | 1 cut(s) | 420 |
| BbvI | GCAGC | 1 cut(s) | 965 |
| BccI | CCATC | 1 cut(s) | 193 |
| BceAI | ACGGC | 4 cut(s) | 202, 346, 438, 803 |
| BciT130I | CCWGG | 2 cut(s) | 510, 1251 |
| BcnI | CCSGG | 4 cut(s) | 260, 474, 903, 1278 |
| BcoDI | GTCTC | 3 cut(s) | 440, 988, 1390 |
| BfaI | CTAG | 5 cut(s) | 63, 69, 134, 795, 836 |
| BfrI | CTTAAG | 1 cut(s) | 527 |
| BglII | AGATCT | 1 cut(s) | 523 |
| BisI | GCNGC | 1 cut(s) | 954 |
| BlnI | CCTAGG | 1 cut(s) | 133 |
| BlpI | GCTNAGC | 1 cut(s) | 468 |
| BlsI | GCNGC | 1 cut(s) | 955 |
| Bme1390I | CCNGG | 6 cut(s) | 260, 474, 510, 903, 1251, 1278 |
| BmeT110I | CYCGRG | 1 cut(s) | 1322 |
| BmgT120I | GGNCC | 1 cut(s) | 1348 |
| BmiI | GGNNCC | 4 cut(s) | 292, 857, 1169, 1359 |
| BmrFI | CCNGG | 6 cut(s) | 260, 474, 510, 903, 1251, 1278 |
| BmsI | GCATC | 2 cut(s) | 198, 816 |
| BmtI | GCTAGC | 1 cut(s) | 72 |
| BpiI | GAAGAC | 2 cut(s) | 775, 846 |
| BpmI | CTGGAG | 2 cut(s) | 290, 725 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 468 |
| BpuMI | CCSGG | 4 cut(s) | 260, 474, 903, 1278 |
| BsaBI | GATNNNNATC | 1 cut(s) | 522 |
| BsaI | GGTCTC | 1 cut(s) | 1390 |
| BsaJI | CCNNGG | 7 cut(s) | 51, 133, 508, 509, 1250, 1311, 1365 |
| BsaWI | WCCGGW | 1 cut(s) | 539 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 279, 309 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 886, 1381 |
| Bse1I | ACTGG | 3 cut(s) | 170, 273, 708 |
| Bse3DI | GCAATG | 3 cut(s) | 1141, 1264, 1338 |
| Bse8I | GATNNNNATC | 1 cut(s) | 522 |
| BseBI | CCWGG | 2 cut(s) | 510, 1251 |
| BseDI | CCNNGG | 7 cut(s) | 51, 133, 508, 509, 1250, 1311, 1365 |
| BseGI | GGATG | 1 cut(s) | 1218 |
| BseJI | GATNNNNATC | 1 cut(s) | 522 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 886, 1381 |
| BseMI | GCAATG | 3 cut(s) | 1141, 1264, 1338 |
| BseMII | CTCAG | 1 cut(s) | 459 |
| BseNI | ACTGG | 3 cut(s) | 170, 273, 708 |
| BseXI | GCAGC | 1 cut(s) | 965 |
| BseYI | CCCAGC | 1 cut(s) | 1139 |
| Bsh1236I | CGCG | 1 cut(s) | 861 |
| BshFI | GGCC | 2 cut(s) | 897, 1349 |
| BshNI | GGYRCC | 1 cut(s) | 1167 |
| BsiHKAI | GWGCWC | 1 cut(s) | 420 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1322 |
| BsiSI | CCGG | 5 cut(s) | 260, 474, 540, 902, 1277 |
| BslFI | GGGAC | 1 cut(s) | 216 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 886, 1381 |
| BsmAI | GTCTC | 3 cut(s) | 440, 988, 1390 |
| BsmFI | GGGAC | 1 cut(s) | 216 |
| BsnI | GGCC | 2 cut(s) | 897, 1349 |
| Bso31I | GGTCTC | 1 cut(s) | 1390 |
| BsoBI | CYCGRG | 1 cut(s) | 1322 |
| Bsp1286I | GDGCHC | 5 cut(s) | 420, 474, 628, 1239, 1362 |
| Bsp1407I | TGTACA | 1 cut(s) | 873 |
| Bsp143I | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 468 |
| Bsp19I | CCATGG | 1 cut(s) | 1365 |
| BspACI | CCGC | 3 cut(s) | 371, 859, 951 |
| BspANI | GGCC | 2 cut(s) | 897, 1349 |
| BspCNI | CTCAG | 1 cut(s) | 460 |
| BspFNI | CGCG | 1 cut(s) | 861 |
| BspLI | GGNNCC | 4 cut(s) | 292, 857, 1169, 1359 |
| BspOI | GCTAGC | 1 cut(s) | 72 |
| BspPI | GGATC | 5 cut(s) | 161, 285, 298, 395, 897 |
| BspT107I | GGYRCC | 1 cut(s) | 1167 |
| BspTI | CTTAAG | 1 cut(s) | 527 |
| BspTNI | GGTCTC | 1 cut(s) | 1390 |
| BsrDI | GCAATG | 3 cut(s) | 1141, 1264, 1338 |
| BsrGI | TGTACA | 1 cut(s) | 873 |
| BsrI | ACTGG | 3 cut(s) | 170, 273, 708 |
| BssECI | CCNNGG | 7 cut(s) | 51, 133, 508, 509, 1250, 1311, 1365 |
| BssMI | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| BssSI | CACGAG | 1 cut(s) | 413 |
| BssT1I | CCWWGG | 3 cut(s) | 51, 133, 1365 |
| Bst2BI | CACGAG | 1 cut(s) | 413 |
| Bst2UI | CCWGG | 2 cut(s) | 510, 1251 |
| Bst4CI | ACNGT | 3 cut(s) | 781, 943, 1454 |
| Bst6I | CTCTTC | 3 cut(s) | 127, 991, 1058 |
| BstAFI | CTTAAG | 1 cut(s) | 527 |
| BstAUI | TGTACA | 1 cut(s) | 873 |
| BstC8I | GCNNGC | 6 cut(s) | 70, 249, 253, 309, 600, 899 |
| BstDEI | CTNAG | 3 cut(s) | 468, 885, 1070 |
| BstDSI | CCRYGG | 1 cut(s) | 1365 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 884 |
| BstF5I | GGATG | 1 cut(s) | 1218 |
| BstFNI | CGCG | 1 cut(s) | 861 |
| BstHHI | GCGC | 2 cut(s) | 537, 598 |
| BstKTI | GATC | 6 cut(s) | 169, 293, 403, 526, 892, 1441 |
| BstMAI | GTCTC | 3 cut(s) | 440, 988, 1390 |
| BstMBI | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| BstNI | CCWGG | 2 cut(s) | 510, 1251 |
| BstNSI | RCATGY | 3 cut(s) | 1006, 1018, 1309 |
| BstSCI | CCNGG | 6 cut(s) | 258, 472, 508, 901, 1249, 1276 |
| BstUI | CGCG | 1 cut(s) | 861 |
| BstV1I | GCAGC | 1 cut(s) | 965 |
| BstV2I | GAAGAC | 2 cut(s) | 775, 846 |
| BstX2I | RGATCY | 3 cut(s) | 290, 523, 889 |
| BstYI | RGATCY | 3 cut(s) | 290, 523, 889 |
| BsuRI | GGCC | 2 cut(s) | 897, 1349 |
| BtgI | CCRYGG | 1 cut(s) | 1365 |
| BtsCI | GGATG | 1 cut(s) | 1218 |
| BtsI | GCAGTG | 1 cut(s) | 591 |
| BtsIMutI | CAGTG | 4 cut(s) | 266, 591, 701, 843 |
| Cac8I | GCNNGC | 6 cut(s) | 70, 249, 253, 309, 600, 899 |
| CfoI | GCGC | 2 cut(s) | 537, 598 |
| Cfr13I | GGNCC | 1 cut(s) | 1348 |
| CseI | GACGC | 1 cut(s) | 272 |
| Csp6I | GTAC | 1 cut(s) | 874 |
| CviAII | CATG | 9 cut(s) | 243, 367, 454, 919, 1003, 1015, 1162, 1306, 1366 |
| CviQI | GTAC | 1 cut(s) | 874 |
| DdeI | CTNAG | 3 cut(s) | 468, 885, 1070 |
| DpnI | GATC | 6 cut(s) | 168, 292, 402, 525, 891, 1440 |
| DpnII | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| DraIII | CACNNNGTG | 1 cut(s) | 871 |
| Eam1104I | CTCTTC | 3 cut(s) | 127, 991, 1058 |
| EarI | CTCTTC | 3 cut(s) | 127, 991, 1058 |
| EciI | GGCGGA | 1 cut(s) | 386 |
| Eco130I | CCWWGG | 3 cut(s) | 51, 133, 1365 |
| Eco24I | GRGCYC | 4 cut(s) | 474, 628, 1239, 1362 |
| Eco31I | GGTCTC | 1 cut(s) | 1390 |
| Eco88I | CYCGRG | 1 cut(s) | 1322 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 884 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1348 |
| EcoRI | GAATTC | 2 cut(s) | 56, 632 |
| EcoRII | CCWGG | 2 cut(s) | 508, 1249 |
| EcoT14I | CCWWGG | 3 cut(s) | 51, 133, 1365 |
| EcoT38I | GRGCYC | 4 cut(s) | 474, 628, 1239, 1362 |
| ErhI | CCWWGG | 3 cut(s) | 51, 133, 1365 |
| FaeI | CATG | 9 cut(s) | 246, 370, 457, 922, 1006, 1018, 1165, 1309, 1369 |
| FaqI | GGGAC | 1 cut(s) | 216 |
| FatI | CATG | 9 cut(s) | 242, 366, 453, 918, 1002, 1014, 1161, 1305, 1365 |
| FauNDI | CATATG | 1 cut(s) | 1435 |
| Fnu4HI | GCNGC | 1 cut(s) | 954 |
| FokI | GGATG | 1 cut(s) | 1225 |
| FriOI | GRGCYC | 4 cut(s) | 474, 628, 1239, 1362 |
| Fsp4HI | GCNGC | 1 cut(s) | 954 |
| FspBI | CTAG | 5 cut(s) | 63, 69, 134, 795, 836 |
| GlaI | GCGC | 2 cut(s) | 536, 597 |
| GluI | GCNGC | 1 cut(s) | 954 |
| GsaI | CCCAGC | 1 cut(s) | 1143 |
| GsuI | CTGGAG | 2 cut(s) | 290, 725 |
| HaeIII | GGCC | 2 cut(s) | 897, 1349 |
| HapII | CCGG | 5 cut(s) | 260, 474, 540, 902, 1277 |
| HgaI | GACGC | 1 cut(s) | 272 |
| HhaI | GCGC | 2 cut(s) | 537, 598 |
| Hin1II | CATG | 9 cut(s) | 246, 370, 457, 922, 1006, 1018, 1165, 1309, 1369 |
| Hin6I | GCGC | 2 cut(s) | 535, 596 |
| HinP1I | GCGC | 2 cut(s) | 535, 596 |
| HindIII | AAGCTT | 1 cut(s) | 970 |
| HinfI | GANTC | 6 cut(s) | 104, 119, 214, 239, 448, 1445 |
| HpaII | CCGG | 5 cut(s) | 260, 474, 540, 902, 1277 |
| HphI | GGTGA | 1 cut(s) | 1364 |
| Hpy166II | GTNNAC | 4 cut(s) | 865, 874, 1159, 1372 |
| Hpy188I | TCNGA | 6 cut(s) | 198, 302, 1273, 1289, 1312, 1450 |
| Hpy188III | TCNNGA | 3 cut(s) | 320, 774, 1442 |
| Hpy8I | GTNNAC | 4 cut(s) | 865, 874, 1159, 1372 |
| Hpy99I | CGWCG | 1 cut(s) | 764 |
| HpyAV | CCTTC | 3 cut(s) | 500, 1045, 1074 |
| HpyCH4III | ACNGT | 3 cut(s) | 781, 943, 1454 |
| HpyCH4IV | ACGT | 1 cut(s) | 1339 |
| HpyF3I | CTNAG | 3 cut(s) | 468, 885, 1070 |
| HpySE526I | ACGT | 1 cut(s) | 1339 |
| Hsp92II | CATG | 9 cut(s) | 246, 370, 457, 922, 1006, 1018, 1165, 1309, 1369 |
| HspAI | GCGC | 2 cut(s) | 535, 596 |
| Kzo9I | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| LmnI | GCTCC | 4 cut(s) | 271, 706, 1204, 1357 |
| Lsp1109I | GCAGC | 1 cut(s) | 965 |
| LweI | GCATC | 2 cut(s) | 198, 816 |
| MaeI | CTAG | 5 cut(s) | 63, 69, 134, 795, 836 |
| MaeII | ACGT | 1 cut(s) | 1339 |
| MaeIII | GTNAC | 4 cut(s) | 101, 383, 661, 820 |
| MalI | GATC | 6 cut(s) | 168, 292, 402, 525, 891, 1440 |
| MboI | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| MboII | GAAGA | 6 cut(s) | 114, 166, 775, 851, 978, 1075 |
| MfeI | CAATTG | 1 cut(s) | 1424 |
| MflI | RGATCY | 3 cut(s) | 290, 523, 889 |
| MhlI | GDGCHC | 5 cut(s) | 420, 474, 628, 1239, 1362 |
| MluCI | AATT | 9 cut(s) | 41, 56, 395, 549, 632, 1031, 1042, 1229, 1424 |
| MlyI | GAGTC | 4 cut(s) | 98, 113, 248, 442 |
| MroXI | GAANNNNTTC | 1 cut(s) | 552 |
| MseI | TTAA | 3 cut(s) | 528, 711, 1456 |
| MslI | CAYNNNNRTG | 3 cut(s) | 197, 692, 962 |
| MspCI | CTTAAG | 1 cut(s) | 527 |
| MspI | CCGG | 5 cut(s) | 260, 474, 540, 902, 1277 |
| MspR9I | CCNGG | 6 cut(s) | 260, 474, 510, 903, 1251, 1278 |
| MunI | CAATTG | 1 cut(s) | 1424 |
| MvaI | CCWGG | 2 cut(s) | 510, 1251 |
| MvnI | CGCG | 1 cut(s) | 861 |
| NciI | CCSGG | 4 cut(s) | 260, 474, 903, 1278 |
| NcoI | CCATGG | 1 cut(s) | 1365 |
| NdeI | CATATG | 1 cut(s) | 1435 |
| NdeII | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| NheI | GCTAGC | 1 cut(s) | 68 |
| NlaIII | CATG | 9 cut(s) | 246, 370, 457, 922, 1006, 1018, 1165, 1309, 1369 |
| NlaIV | GGNNCC | 4 cut(s) | 292, 857, 1169, 1359 |
| NmuCI | GTSAC | 1 cut(s) | 101 |
| NspI | RCATGY | 3 cut(s) | 1006, 1018, 1309 |
| PaeR7I | CTCGAG | 1 cut(s) | 1322 |
| PasI | CCCWGGG | 1 cut(s) | 509 |
| PciI | ACATGT | 1 cut(s) | 1305 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 807, 816 |
| PdmI | GAANNNNTTC | 1 cut(s) | 552 |
| PfeI | GAWTC | 2 cut(s) | 214, 1445 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1381 |
| PkrI | GCNGC | 1 cut(s) | 955 |
| PleI | GAGTC | 4 cut(s) | 98, 113, 247, 442 |
| PpsI | GAGTC | 4 cut(s) | 98, 113, 247, 442 |
| PscI | ACATGT | 1 cut(s) | 1305 |
| Psp6I | CCWGG | 2 cut(s) | 508, 1249 |
| PspFI | CCCAGC | 1 cut(s) | 1139 |
| PspGI | CCWGG | 2 cut(s) | 508, 1249 |
| PspN4I | GGNNCC | 4 cut(s) | 292, 857, 1169, 1359 |
| PspPI | GGNCC | 1 cut(s) | 1348 |
| PspXI | VCTCGAGB | 1 cut(s) | 1322 |
| PsuI | RGATCY | 3 cut(s) | 290, 523, 889 |
| RsaI | GTAC | 1 cut(s) | 875 |
| RsaNI | GTAC | 1 cut(s) | 874 |
| RseI | CAYNNNNRTG | 3 cut(s) | 197, 692, 962 |
| SaqAI | TTAA | 3 cut(s) | 528, 711, 1456 |
| SatI | GCNGC | 1 cut(s) | 954 |
| Sau3AI | GATC | 6 cut(s) | 166, 290, 400, 523, 889, 1438 |
| Sau96I | GGNCC | 1 cut(s) | 1348 |
| SchI | GAGTC | 4 cut(s) | 98, 113, 248, 442 |
| ScrFI | CCNGG | 6 cut(s) | 260, 474, 510, 903, 1251, 1278 |
| SduI | GDGCHC | 5 cut(s) | 420, 474, 628, 1239, 1362 |
| SfaNI | GCATC | 2 cut(s) | 198, 816 |
| Sfr274I | CTCGAG | 1 cut(s) | 1322 |
| SlaI | CTCGAG | 1 cut(s) | 1322 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 197, 692, 962 |
| SmlI | CTYRAG | 2 cut(s) | 527, 1322 |
| SmoI | CTYRAG | 2 cut(s) | 527, 1322 |
| Sse9I | AATT | 9 cut(s) | 41, 56, 395, 549, 632, 1031, 1042, 1229, 1424 |
| SsiI | CCGC | 3 cut(s) | 371, 859, 951 |
| SspMI | CTAG | 5 cut(s) | 63, 69, 134, 795, 836 |
| StyD4I | CCNGG | 6 cut(s) | 258, 472, 508, 901, 1249, 1276 |
| StyI | CCWWGG | 3 cut(s) | 51, 133, 1365 |
| TaaI | ACNGT | 3 cut(s) | 781, 943, 1454 |
| TaiI | ACGT | 1 cut(s) | 1342 |
| TaqI | TCGA | 3 cut(s) | 86, 399, 1323 |
| TasI | AATT | 9 cut(s) | 41, 56, 395, 549, 632, 1031, 1042, 1229, 1424 |
| TatI | WGTACW | 1 cut(s) | 873 |
| TfiI | GAWTC | 2 cut(s) | 214, 1445 |
| Tru1I | TTAA | 3 cut(s) | 528, 711, 1456 |
| Tru9I | TTAA | 3 cut(s) | 528, 711, 1456 |
| TscAI | CASTG | 4 cut(s) | 273, 598, 708, 850 |
| TseFI | GTSAC | 1 cut(s) | 101 |
| TseI | GCWGC | 1 cut(s) | 953 |
| Tsp45I | GTSAC | 1 cut(s) | 101 |
| TspDTI | ATGAA | 3 cut(s) | 355, 1229, 1422 |
| TspGWI | ACGGA | 1 cut(s) | 283 |
| TspRI | CASTG | 4 cut(s) | 273, 598, 708, 850 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1381 |
| Vha464I | CTTAAG | 1 cut(s) | 527 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 884 |
| XapI | RAATTY | 5 cut(s) | 56, 395, 632, 1031, 1229 |
| XceI | RCATGY | 3 cut(s) | 1006, 1018, 1309 |
| XhoI | CTCGAG | 1 cut(s) | 1322 |
| XmaJI | CCTAGG | 1 cut(s) | 133 |
| XmnI | GAANNNNTTC | 1 cut(s) | 552 |
| XspI | CTAG | 5 cut(s) | 63, 69, 134, 795, 836 |