Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0012530

Physical Location & Seq

Genomic Coordinates Reverse (-)

37859127 .. 37862746

Gene Structure 3620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G448400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGCTTCCATAACATTTTCCGGCACTTCTGGAAACTCCTTTTTCCTGCCAACAGCTTCTGTTTCCCATTACTCCAATCAAAATATAAGAGATGGCTTTAATCCATTGAAGAAGAACTTGAGTGACACTAAAAAGAAACACAATGGTCGGGGCTTGGTGTCCACAAATGTTGCAAGTCCGCCATTACCGGCTGTGGCTCCTCTGCTGCCGAGAAGAGAGAGCAGCAATAGTGGCGACCTGAGCCACGTGGCGTGGACCAGCGTGCGGCAGGAGAGATGGGAAGGAGAGCTGCTTGTCCAAGGAGAAATACCATTGTGGCTGAAAGGGACGTACCTAAGAAATGGTCCAGGGCTATGGCACATTGGGGACTACAACTTCCGCCACCTCTTTGACGGCTACGCCATGCTAGTCAAACTCCAGTTTGAAGACGGCCGCCTCATCGCCGGCCACCGCCAAATTGAATCCGAGGCCTACAAGGCTGCCATGAAGACCCAAAAGTTATGTTACCGTGAATTCTCGGAGGTTCCTAAGGCCGACAATTTCCTATCCTACATAGGCGAGTTAGCCAACCTATTCTCTGGTGCATCTCTGACCGACAACGCGAACACCGGAGTGGTTATGCTCGCAGATGGTCGGGTCGTGTGCCTCACGGAGACTCAGAAAGGGTCCATAATCATCGACCCGACCACCTTGGACACTTTAGGAAAATTTGAGTACAGTGACACATTGGGGGGTTTGATACACTCCGCACATCCTATTGTGACAGAGACCGAGTTTCTGTCTTTACTACCCGATTTGATCAACCCGGGTTATTTGGCAGTCAGGATGGAACCGGGTACCAACGAGAGGAAGGTGATTGGGCGGGTTGATTGTAGTCGTGGACCAGCACCGGGTTGGGTGCACTCATTTCCGGTGACCGAGCACTATATAATTGTACCGGAAATGCCATTGAGATATTGTGCTGGGAATTTGCTCAAGGCCGAGCCCACACCATTGTACAAGTTTGAGTGGCACCCTGAATCTAAAGCATTTATGCATGTCATGTGTAAAGCTAGTGGCAAAATTGTGGCGAGTGTGGAAGTGCCATTATACATAACGTTCCATTTCATAAATGCTTATGAAGAAAAAGATGAGGATGGGAGGGTGACGGCGGTCATTGCAGATTGTTGTGAGCACAACGCTGATACAACGATTTTGGATAAGCTGAGGATACATAACCTACGCTCATATACTGGCCAAGATGTATTGCCAGATGCTAGGGTTGGAAGGTTTAGAATACCATTTGATGGAAGTGCATATGGAAAATTGGAAGCAGCATTAGACCCAAACGAACATGGAAGAGGGTTGGACATGTGCAGCATAAACCCTGCCTATTTGGGCAAACAATACAGATATGCTTATGCTTGTGGGGCTCAGCGCCCATGCAACTTCCCCAACACCCTCACCAAGATTGATTTGGTGAACAAGAAAGCTAAGAATTGGCATGATGAGGGGGCAGTACCCTCCGAACCATTCTTTGTGGCTCGACCCGGGGCAACCGAAGAAGATGATGGAGTTGTAATCTCGATGGTTAGTGGGAAAAATGGAGATGGGTATGCATTGTTATTAGATGGATCCACGTTCCAAGAGATTGCAAGAGCTAAGTTCCCCTATGGCCTTCCATATGGGCTGCATGGATGCTGGGTTCCCTCCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009914 GO:0009926 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010223 GO:0010346 GO:0010817 GO:0016042 GO:0016106 GO:0016108 GO:0016110 GO:0016114 GO:0016115 GO:0016116 GO:0016118 GO:0016119 GO:0016121 GO:0016122 GO:0016124 GO:0016491 GO:0016701 GO:0016702 GO:0018130 GO:0032501 GO:0032502 GO:0042214 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046247 GO:0046483 GO:0048366 GO:0048367 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051213 GO:0051234 GO:0055114 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0099402 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901575 GO:1901576 GO:1901600 GO:1901601 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00906 map00906

Pfam Domains

Protein Families

RPE65

Protein Analysis

566

Amino Acids

62.5

Weight (kDa)

6.33

Isoelectric Point (pI)

35.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32810 AT4G32810
fragaria_vesca	FvH4_2g35610
malus_domestica	MD08G1113800.v1.1 MD15G1093500.v1.1
prunus_persica	Prupe.1G448400_v2.0.a1
pyrus_communis	pycom08g09450
rosa_chinensis	RchiOBHm_Chr6g0306201
rosa_laevigata	RLG00000010814 RLG00000011166
rosa_multiflora	Rmu_sc0003594.1_g000004
rosa_roxburghii	Rroxscaffold_7G00161940
rosa_rugosa	Rorug06G0348000 Rorug06G0348000
rosa_samantha	Rh6AG460500 Rh6BG440900 Rh6CG474500 Rh6DG460800
rosa_wichuraiana	Rw6G040110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	836
AccB1I	GGYRCC	2 cut(s)	836, 1011
AccB7I	CCANNNNNTGG	1 cut(s)	1286
AccII	CGCG	1 cut(s)	602
AciI	CCGC	8 cut(s)	179, 265, 379, 433, 451, 747, 862, 1151
AclI	AACGTT	1 cut(s)	1097
AclWI	GGATC	2 cut(s)	1608, 1621
AcoI	YGGCCR	3 cut(s)	430, 445, 1234
AcsI	RAATTY	3 cut(s)	512, 707, 967
AcvI	CACGTG	1 cut(s)	247
AfaI	GTAC	6 cut(s)	332, 716, 838, 936, 998, 1500
AfiI	CCNNNNNNNGG	4 cut(s)	264, 846, 890, 1286
AflIII	ACRYGT	1 cut(s)	1350
AgsI	TTSAA	3 cut(s)	109, 425, 461
AjnI	CCWGG	1 cut(s)	346
AleI	CACNNNNGTG	1 cut(s)	611
AloI	GAACNNNNNNTCC	1 cut(s)	1668
AluBI	AGCT	6 cut(s)	56, 289, 1052, 1204, 1472, 1640
AluI	AGCT	6 cut(s)	56, 289, 1052, 1204, 1472, 1640
Alw21I	GWGCWC	3 cut(s)	903, 924, 1176
Alw26I	GTCTC	2 cut(s)	647, 761
Alw44I	GTGCAC	1 cut(s)	899
AlwI	GGATC	2 cut(s)	1608, 1621
AlwNI	CAGNNNCTG	1 cut(s)	59
Ama87I	CYCGRG	2 cut(s)	805, 1529
AoxI	GGCC	7 cut(s)	430, 445, 468, 531, 978, 1234, 1654
ApaLI	GTGCAC	1 cut(s)	899
ApeKI	GCWGC	7 cut(s)	205, 222, 289, 479, 1313, 1356, 1669
ApoI	RAATTY	3 cut(s)	512, 707, 967
Asp718I	GGTACC	1 cut(s)	836
AspLEI	GCGC	1 cut(s)	1419
AspS9I	GGNCC	4 cut(s)	255, 344, 666, 881
AsuC2I	CCSGG	6 cut(s)	806, 807, 834, 891, 1530, 1531
AsuHPI	GGTGA	5 cut(s)	865, 925, 1156, 1435, 1471
AvaI	CYCGRG	2 cut(s)	805, 1529
AvaII	GGWCC	4 cut(s)	255, 344, 666, 881
AxyI	CCTNAGG	1 cut(s)	528
BaeGI	GKGCMC	1 cut(s)	903
BalI	TGGCCA	1 cut(s)	1236
BamHI	GGATCC	1 cut(s)	1613
BanI	GGYRCC	2 cut(s)	836, 1011
BanII	GRGCYC	2 cut(s)	987, 1414
BbrPI	CACGTG	1 cut(s)	247
BbsI	GAAGAC	2 cut(s)	432, 494
Bbv12I	GWGCWC	3 cut(s)	903, 924, 1176
BbvCI	CCTCAGC	1 cut(s)	1205
BbvI	GCAGC	7 cut(s)	192, 234, 276, 466, 1325, 1368, 1656
BceAI	ACGGC	3 cut(s)	409, 445, 1164
BciT130I	CCWGG	1 cut(s)	348
BciVI	GTATCC	1 cut(s)	1203
BclI	TGATCA	1 cut(s)	798
BcnI	CCSGG	6 cut(s)	806, 807, 834, 891, 1530, 1531
BcoDI	GTCTC	2 cut(s)	647, 761
BfaI	CTAG	3 cut(s)	407, 1053, 1257
BfoI	RGCGCY	1 cut(s)	1420
BfuI	GTATCC	1 cut(s)	1203
BglI	GCCNNNNNGGC	1 cut(s)	476
BisI	GCNGC	9 cut(s)	206, 223, 266, 290, 433, 480, 1314, 1357, 1670
BlpI	GCTNAGC	1 cut(s)	1413
BlsI	GCNGC	9 cut(s)	207, 224, 267, 291, 434, 481, 1315, 1358, 1671
Bme1390I	CCNGG	7 cut(s)	348, 806, 807, 834, 891, 1530, 1531
Bme18I	GGWCC	4 cut(s)	255, 344, 666, 881
BmeT110I	CYCGRG	2 cut(s)	805, 1529
BmgT120I	GGNCC	4 cut(s)	255, 344, 666, 881
BmiI	GGNNCC	8 cut(s)	198, 525, 667, 831, 838, 1013, 1615, 1686
BmrFI	CCNGG	7 cut(s)	348, 806, 807, 834, 891, 1530, 1531
BmsI	GCATC	3 cut(s)	593, 1243, 1667
BoxI	GACNNNNGTC	1 cut(s)	1151
BpiI	GAAGAC	2 cut(s)	432, 494
BpmI	CTGGAG	1 cut(s)	401
Bpu10I	CCTNAGC	2 cut(s)	239, 1205
Bpu1102I	GCTNAGC	1 cut(s)	1413
BpuEI	CTTGAG	2 cut(s)	139, 959
BpuMI	CCSGG	6 cut(s)	806, 807, 834, 891, 1530, 1531
BsaAI	YACGTR	1 cut(s)	247
BsaI	GGTCTC	1 cut(s)	761
BsaJI	CCNNGG	7 cut(s)	298, 347, 465, 690, 805, 1529, 1530
BsaWI	WCCGGW	3 cut(s)	608, 910, 937
Bsc4I	CCNNNNNNNGG	4 cut(s)	264, 846, 890, 1286
Bse118I	RCCGGY	2 cut(s)	187, 443
Bse1I	ACTGG	2 cut(s)	418, 1237
Bse21I	CCTNAGG	1 cut(s)	528
Bse3DI	GCAATG	1 cut(s)	1155
BseBI	CCWGG	1 cut(s)	348
BseDI	CCNNGG	7 cut(s)	298, 347, 465, 690, 805, 1529, 1530
BseGI	GGATG	4 cut(s)	751, 831, 1141, 1682
BseLI	CCNNNNNNNGG	4 cut(s)	264, 846, 890, 1286
BseMI	GCAATG	1 cut(s)	1155
BseMII	CTCAG	4 cut(s)	230, 671, 1196, 1427
BseNI	ACTGG	2 cut(s)	418, 1237
BseRI	GAGGAG	1 cut(s)	189
BseSI	GKGCMC	1 cut(s)	903
BseX3I	CGGCCG	1 cut(s)	430
BseXI	GCAGC	7 cut(s)	192, 234, 276, 466, 1325, 1368, 1656
BseYI	CCCAGC	2 cut(s)	962, 1680
BsgI	GTGCAG	1 cut(s)	1375
Bsh1236I	CGCG	1 cut(s)	602
Bsh1285I	CGRYCG	1 cut(s)	433
BshFI	GGCC	7 cut(s)	432, 447, 470, 533, 980, 1236, 1656
BshNI	GGYRCC	2 cut(s)	836, 1011
BsiEI	CGRYCG	1 cut(s)	433
BsiHKAI	GWGCWC	3 cut(s)	903, 924, 1176
BsiHKCI	CYCGRG	2 cut(s)	805, 1529
BslFI	GGGAC	2 cut(s)	340, 380
BslI	CCNNNNNNNGG	4 cut(s)	264, 846, 890, 1286
BsmAI	GTCTC	2 cut(s)	647, 761
BsmFI	GGGAC	2 cut(s)	340, 380
BsnI	GGCC	7 cut(s)	432, 447, 470, 533, 980, 1236, 1656
Bso31I	GGTCTC	1 cut(s)	761
BsoBI	CYCGRG	2 cut(s)	805, 1529
Bsp1286I	GDGCHC	5 cut(s)	903, 924, 987, 1176, 1414
Bsp1407I	TGTACA	1 cut(s)	996
Bsp143I	GATC	2 cut(s)	798, 1613
Bsp1720I	GCTNAGC	1 cut(s)	1413
BspACI	CCGC	8 cut(s)	179, 265, 379, 433, 451, 747, 862, 1151
BspANI	GGCC	7 cut(s)	432, 447, 470, 533, 980, 1236, 1656
BspCNI	CTCAG	4 cut(s)	231, 670, 1197, 1426
BspFNI	CGCG	1 cut(s)	602
BspLI	GGNNCC	8 cut(s)	198, 525, 667, 831, 838, 1013, 1615, 1686
BspPI	GGATC	2 cut(s)	1608, 1621
BspT107I	GGYRCC	2 cut(s)	836, 1011
BspTNI	GGTCTC	1 cut(s)	761
BsrDI	GCAATG	1 cut(s)	1155
BsrFI	RCCGGY	2 cut(s)	187, 443
BsrGI	TGTACA	1 cut(s)	996
BsrI	ACTGG	2 cut(s)	418, 1237
BssAI	RCCGGY	2 cut(s)	187, 443
BssECI	CCNNGG	7 cut(s)	298, 347, 465, 690, 805, 1529, 1530
BssMI	GATC	2 cut(s)	798, 1613
BssT1I	CCWWGG	2 cut(s)	298, 690
Bst2UI	CCWGG	1 cut(s)	348
Bst4CI	ACNGT	2 cut(s)	509, 719
Bst6I	CTCTTC	2 cut(s)	208, 1333
BstAUI	TGTACA	1 cut(s)	996
BstBAI	YACGTR	1 cut(s)	247
BstC8I	GCNNGC	3 cut(s)	263, 445, 624
BstDEI	CTNAG	8 cut(s)	239, 335, 528, 657, 1205, 1413, 1473, 1641
BstEII	GGTNACC	1 cut(s)	913
BstF5I	GGATG	4 cut(s)	751, 831, 1141, 1682
BstFNI	CGCG	1 cut(s)	602
BstH2I	RGCGCY	1 cut(s)	1420
BstHHI	GCGC	1 cut(s)	1419
BstKTI	GATC	2 cut(s)	801, 1616
BstMAI	GTCTC	2 cut(s)	647, 761
BstMBI	GATC	2 cut(s)	798, 1613
BstMCI	CGRYCG	1 cut(s)	433
BstMWI	GCNNNNNNNGC	5 cut(s)	231, 240, 476, 1157, 1409
BstNI	CCWGG	1 cut(s)	348
BstNSI	RCATGY	2 cut(s)	1040, 1354
BstPAI	GACNNNNGTC	1 cut(s)	1151
BstPI	GGTNACC	1 cut(s)	913
BstSCI	CCNGG	7 cut(s)	346, 804, 805, 832, 889, 1528, 1529
BstSLI	GKGCMC	1 cut(s)	903
BstUI	CGCG	1 cut(s)	602
BstV1I	GCAGC	7 cut(s)	192, 234, 276, 466, 1325, 1368, 1656
BstV2I	GAAGAC	2 cut(s)	432, 494
BstX2I	RGATCY	1 cut(s)	1613
BstXI	CCANNNNNNTGG	1 cut(s)	354
BstYI	RGATCY	1 cut(s)	1613
BstZI	CGGCCG	1 cut(s)	430
Bsu36I	CCTNAGG	1 cut(s)	528
BsuI	GTATCC	1 cut(s)	1203
BsuRI	GGCC	7 cut(s)	432, 447, 470, 533, 980, 1236, 1656
BtgZI	GCGATG	1 cut(s)	424
BtsCI	GGATG	4 cut(s)	751, 831, 1141, 1682
BtsIMutI	CAGTG	1 cut(s)	724
Cac8I	GCNNGC	3 cut(s)	263, 445, 624
CaiI	CAGNNNCTG	1 cut(s)	59
CfoI	GCGC	1 cut(s)	1419
Cfr10I	RCCGGY	2 cut(s)	187, 443
Cfr13I	GGNCC	4 cut(s)	255, 344, 666, 881
Cfr9I	CCCGGG	2 cut(s)	805, 1529
Csp6I	GTAC	6 cut(s)	331, 715, 837, 935, 997, 1499
CspCI	CAANNNNNGTGG	2 cut(s)	151, 186
CviAII	CATG	9 cut(s)	403, 484, 1037, 1042, 1334, 1351, 1422, 1484, 1673
CviQI	GTAC	6 cut(s)	331, 715, 837, 935, 997, 1499
DdeI	CTNAG	8 cut(s)	239, 335, 528, 657, 1205, 1413, 1473, 1641
DpnI	GATC	2 cut(s)	800, 1615
DpnII	GATC	2 cut(s)	798, 1613
EaeI	YGGCCR	3 cut(s)	430, 445, 1234
EagI	CGGCCG	1 cut(s)	430
Eam1104I	CTCTTC	2 cut(s)	208, 1333
EarI	CTCTTC	2 cut(s)	208, 1333
EciI	GGCGGA	2 cut(s)	168, 368
EclXI	CGGCCG	1 cut(s)	430
Eco130I	CCWWGG	2 cut(s)	298, 690
Eco147I	AGGCCT	1 cut(s)	470
Eco24I	GRGCYC	2 cut(s)	987, 1414
Eco31I	GGTCTC	1 cut(s)	761
Eco47I	GGWCC	4 cut(s)	255, 344, 666, 881
Eco52I	CGGCCG	1 cut(s)	430
Eco72I	CACGTG	1 cut(s)	247
Eco81I	CCTNAGG	1 cut(s)	528
Eco88I	CYCGRG	2 cut(s)	805, 1529
Eco91I	GGTNACC	1 cut(s)	913
EcoO65I	GGTNACC	1 cut(s)	913
EcoRI	GAATTC	1 cut(s)	512
EcoRII	CCWGG	1 cut(s)	346
EcoT14I	CCWWGG	2 cut(s)	298, 690
EcoT22I	ATGCAT	2 cut(s)	1038, 1600
EcoT38I	GRGCYC	2 cut(s)	987, 1414
ErhI	CCWWGG	2 cut(s)	298, 690
FaeI	CATG	9 cut(s)	406, 487, 1040, 1045, 1337, 1354, 1425, 1487, 1676
FalI	AAGNNNNNCTT	2 cut(s)	101, 133
FaqI	GGGAC	2 cut(s)	340, 380
FatI	CATG	9 cut(s)	402, 483, 1036, 1041, 1333, 1350, 1421, 1483, 1672
FauI	CCCGC	1 cut(s)	855
FauNDI	CATATG	2 cut(s)	1297, 1663
FbaI	TGATCA	1 cut(s)	798
Fnu4HI	GCNGC	9 cut(s)	206, 223, 266, 290, 433, 480, 1314, 1357, 1670
FokI	GGATG	4 cut(s)	738, 838, 1148, 1689
FriOI	GRGCYC	2 cut(s)	987, 1414
Fsp4HI	GCNGC	9 cut(s)	206, 223, 266, 290, 433, 480, 1314, 1357, 1670
FspBI	CTAG	3 cut(s)	407, 1053, 1257
GlaI	GCGC	1 cut(s)	1418
GluI	GCNGC	9 cut(s)	206, 223, 266, 290, 433, 480, 1314, 1357, 1670
GsaI	CCCAGC	2 cut(s)	966, 1684
GsuI	CTGGAG	1 cut(s)	401
HaeII	RGCGCY	1 cut(s)	1420
HaeIII	GGCC	7 cut(s)	432, 447, 470, 533, 980, 1236, 1656
HhaI	GCGC	1 cut(s)	1419
Hin1II	CATG	9 cut(s)	406, 487, 1040, 1045, 1337, 1354, 1425, 1487, 1676
Hin6I	GCGC	1 cut(s)	1417
HinP1I	GCGC	1 cut(s)	1417
HinfI	GANTC	3 cut(s)	461, 655, 1019
HphI	GGTGA	5 cut(s)	865, 925, 1156, 1435, 1471
Hpy166II	GTNNAC	5 cut(s)	162, 255, 881, 901, 1462
Hpy188I	TCNGA	5 cut(s)	466, 520, 591, 660, 1507
Hpy188III	TCNNGA	3 cut(s)	30, 823, 1564
Hpy8I	GTNNAC	5 cut(s)	162, 255, 881, 901, 1462
HpyAV	CCTTC	4 cut(s)	275, 844, 1260, 1667
HpyCH4III	ACNGT	2 cut(s)	509, 719
HpyCH4IV	ACGT	4 cut(s)	246, 329, 1097, 1619
HpyF10VI	GCNNNNNNNGC	5 cut(s)	231, 240, 476, 1157, 1409
HpyF3I	CTNAG	8 cut(s)	239, 335, 528, 657, 1205, 1413, 1473, 1641
HpySE526I	ACGT	4 cut(s)	246, 329, 1097, 1619
Hsp92II	CATG	9 cut(s)	406, 487, 1040, 1045, 1337, 1354, 1425, 1487, 1676
HspAI	GCGC	1 cut(s)	1417
KpnI	GGTACC	1 cut(s)	840
KroI	GCCGGC	1 cut(s)	443
KroNI	GCCGGC	1 cut(s)	445
Ksp22I	TGATCA	1 cut(s)	798
Kzo9I	GATC	2 cut(s)	798, 1613
LmnI	GCTCC	1 cut(s)	202
Lsp1109I	GCAGC	7 cut(s)	192, 234, 276, 466, 1325, 1368, 1656
LweI	GCATC	3 cut(s)	593, 1243, 1667
MaeI	CTAG	3 cut(s)	407, 1053, 1257
MaeII	ACGT	4 cut(s)	246, 329, 1097, 1619
MaeIII	GTNAC	6 cut(s)	122, 503, 719, 760, 913, 1144
MalI	GATC	2 cut(s)	800, 1615
MboI	GATC	2 cut(s)	798, 1613
MboII	GAAGA	9 cut(s)	121, 124, 225, 437, 499, 1133, 1350, 1553, 1556
MflI	RGATCY	1 cut(s)	1613
MhlI	GDGCHC	5 cut(s)	903, 924, 987, 1176, 1414
MlsI	TGGCCA	1 cut(s)	1236
MluCI	AATT	9 cut(s)	456, 512, 538, 707, 930, 967, 1062, 1304, 1477
MluNI	TGGCCA	1 cut(s)	1236
MlyI	GAGTC	1 cut(s)	649
MmeI	TCCRAC	2 cut(s)	1243, 1326
Mox20I	TGGCCA	1 cut(s)	1236
Mph1103I	ATGCAT	2 cut(s)	1038, 1600
MroNI	GCCGGC	1 cut(s)	443
MscI	TGGCCA	1 cut(s)	1236
MseI	TTAA	1 cut(s)	99
MslI	CAYNNNNRTG	1 cut(s)	611
Msp20I	TGGCCA	1 cut(s)	1236
MspR9I	CCNGG	7 cut(s)	348, 806, 807, 834, 891, 1530, 1531
MvaI	CCWGG	1 cut(s)	348
MvnI	CGCG	1 cut(s)	602
MwoI	GCNNNNNNNGC	5 cut(s)	231, 240, 476, 1157, 1409
NaeI	GCCGGC	1 cut(s)	445
NciI	CCSGG	6 cut(s)	806, 807, 834, 891, 1530, 1531
NdeI	CATATG	2 cut(s)	1297, 1663
NdeII	GATC	2 cut(s)	798, 1613
NgoMIV	GCCGGC	1 cut(s)	443
NlaIII	CATG	9 cut(s)	406, 487, 1040, 1045, 1337, 1354, 1425, 1487, 1676
NlaIV	GGNNCC	8 cut(s)	198, 525, 667, 831, 838, 1013, 1615, 1686
NmeAIII	GCCGAG	2 cut(s)	234, 1006
NmuCI	GTSAC	5 cut(s)	122, 719, 760, 913, 1144
NsiI	ATGCAT	2 cut(s)	1038, 1600
NspI	RCATGY	2 cut(s)	1040, 1354
OliI	CACNNNNGTG	1 cut(s)	611
PceI	AGGCCT	1 cut(s)	470
PciI	ACATGT	1 cut(s)	1350
PdiI	GCCGGC	1 cut(s)	445
PfeI	GAWTC	2 cut(s)	461, 1019
PflMI	CCANNNNNTGG	1 cut(s)	1286
PkrI	GCNGC	9 cut(s)	207, 224, 267, 291, 434, 481, 1315, 1358, 1671
PleI	GAGTC	1 cut(s)	649
PmaCI	CACGTG	1 cut(s)	247
PmlI	CACGTG	1 cut(s)	247
PpsI	GAGTC	1 cut(s)	649
Ppu21I	YACGTR	1 cut(s)	247
PscI	ACATGT	1 cut(s)	1350
PshAI	GACNNNNGTC	1 cut(s)	1151
Psp1406I	AACGTT	1 cut(s)	1097
Psp6I	CCWGG	1 cut(s)	346
PspCI	CACGTG	1 cut(s)	247
PspEI	GGTNACC	1 cut(s)	913
PspFI	CCCAGC	2 cut(s)	962, 1680
PspGI	CCWGG	1 cut(s)	346
PspN4I	GGNNCC	8 cut(s)	198, 525, 667, 831, 838, 1013, 1615, 1686
PspPI	GGNCC	4 cut(s)	255, 344, 666, 881
PstNI	CAGNNNCTG	1 cut(s)	59
PsuI	RGATCY	1 cut(s)	1613
RsaI	GTAC	6 cut(s)	332, 716, 838, 936, 998, 1500
RsaNI	GTAC	6 cut(s)	331, 715, 837, 935, 997, 1499
RseI	CAYNNNNRTG	1 cut(s)	611
SaqAI	TTAA	1 cut(s)	99
SatI	GCNGC	9 cut(s)	206, 223, 266, 290, 433, 480, 1314, 1357, 1670
Sau3AI	GATC	2 cut(s)	798, 1613
Sau96I	GGNCC	4 cut(s)	255, 344, 666, 881
SchI	GAGTC	1 cut(s)	649
ScrFI	CCNGG	7 cut(s)	348, 806, 807, 834, 891, 1530, 1531
SduI	GDGCHC	5 cut(s)	903, 924, 987, 1176, 1414
SfaNI	GCATC	3 cut(s)	593, 1243, 1667
SinI	GGWCC	4 cut(s)	255, 344, 666, 881
SmaI	CCCGGG	2 cut(s)	807, 1531
SmiMI	CAYNNNNRTG	1 cut(s)	611
SmlI	CTYRAG	2 cut(s)	118, 974
SmoI	CTYRAG	2 cut(s)	118, 974
Sse9I	AATT	9 cut(s)	456, 512, 538, 707, 930, 967, 1062, 1304, 1477
SseBI	AGGCCT	1 cut(s)	470
SsiI	CCGC	8 cut(s)	179, 265, 379, 433, 451, 747, 862, 1151
SspMI	CTAG	3 cut(s)	407, 1053, 1257
StuI	AGGCCT	1 cut(s)	470
StyD4I	CCNGG	7 cut(s)	346, 804, 805, 832, 889, 1528, 1529
StyI	CCWWGG	2 cut(s)	298, 690
TaaI	ACNGT	2 cut(s)	509, 719
TaiI	ACGT	4 cut(s)	249, 332, 1100, 1622
TaqI	TCGA	3 cut(s)	678, 1525, 1565
TaqII	GACCGA	3 cut(s)	608, 785, 932
TasI	AATT	9 cut(s)	456, 512, 538, 707, 930, 967, 1062, 1304, 1477
TatI	WGTACW	2 cut(s)	714, 996
TauI	GCSGC	2 cut(s)	268, 435
TfiI	GAWTC	2 cut(s)	461, 1019
Tru1I	TTAA	1 cut(s)	99
Tru9I	TTAA	1 cut(s)	99
TscAI	CASTG	1 cut(s)	724
TseFI	GTSAC	5 cut(s)	122, 719, 760, 913, 1144
TseI	GCWGC	7 cut(s)	205, 222, 289, 479, 1313, 1356, 1669
Tsp45I	GTSAC	5 cut(s)	122, 719, 760, 913, 1144
TspDTI	ATGAA	3 cut(s)	500, 1096, 1134
TspGWI	ACGGA	1 cut(s)	665
TspMI	CCCGGG	2 cut(s)	805, 1529
TspRI	CASTG	1 cut(s)	724
Van91I	CCANNNNNTGG	1 cut(s)	1286
VneI	GTGCAC	1 cut(s)	899
VpaK11BI	GGWCC	4 cut(s)	255, 344, 666, 881
XapI	RAATTY	3 cut(s)	512, 707, 967
XceI	RCATGY	2 cut(s)	1040, 1354
XcmI	CCANNNNNNNNNTGG	2 cut(s)	891, 1453
XmaI	CCCGGG	2 cut(s)	805, 1529
XspI	CTAG	3 cut(s)	407, 1053, 1257
Zsp2I	ATGCAT	2 cut(s)	1038, 1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.