Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013841

Physical Location & Seq

Genomic Coordinates Reverse (-)

42805784 .. 42810549

Gene Structure 4766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G522500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1050 bp

ATGGCAGTCTCCTTCCTATCAACTGTCCCTTCCTTGCTTCCACTTGTTCCTGTCCCTCTCAACATTGCTGCTACCTCTGGCTCCAGATACCCAACTGTTTCTGTTACAATTCGTTGTAATAAAATTGAAGTTGATACTGCTAATGAGGATAGGTTTCATAGGAGGGACATTCTCAAATGTGTTGGTGCCACCATTGGCATGGAATTGATAAGAAGCTCAGGAACATTTGTTGAAGTGGCTGAGGCTGCTGATCTGATACAACGCAGACAGCGTTCTGAATTTCTTTCAAGTATCAAGGACACCCTTTATCAAGCTATAAAGGCAAATCGAGACATTATCCCATCCTTACTAACTCTGGCACTGAATGATGCTATCACTTATGATAAGGCTTCAAAATCTGGGGGACCAAATGGATCTATCAGATTCAGCTCAGAGATAAGCAGACCTGAAAACAAGGGGCTCACTGCTGCTTTGAATTTCATAGAAGAAGCAAAGAAGGAAATTGATTTGTATTCCAAGGGTGGACCCATTTCCTATGCTGATCTGATCCAATTAGCAGCACAAAGTGCCACAAAGCAAACCTTTCTTGCTGCTGCAATTCGCAAATGTGGAGGGAATGAAGAGAAGGGAAATTTATTATACACTGCATATGGTTCAAATGGTCAGTGGGGCTTGTTTGAAAGGAATTTTGGACGGAGCGATACCCAGGAGCCAGACCCAGAGGGAAGGGTTCCCCAGTGGGACAAAGCAAGTGTGCAGGAATTGAAGGACAAGTTCTCTGCCCTTGGCTTGGGACCCCGCCAGCTAGCTGTTCTGTCTGCATTCTTGGGTCCTGATCAGGTAGCCACAGAAACTTTATTAGCTGCTGATCCTGAAGTTTTTCCATGGGTTCAGAAATATCAACGTAGCCGAGAAACAGTATCCGAAACAGATTATGAGGTTGATCTGATCACTACTTTCACAAAACTGAGTAGTTTGGGACAACAAATCAATTATGAGGCGTATACTTATCCAGTCAAAAAAGTAGATTTCAGCAAACTCAAATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009543 GO:0009579 GO:0009636 GO:0009987 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016999 GO:0017001 GO:0017144 GO:0031976 GO:0031977 GO:0031978 GO:0031984 GO:0033554 GO:0034357 GO:0034599 GO:0042221 GO:0042651 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055035 GO:0055114 GO:0070887 GO:0072593 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

350

Amino Acids

38.42

Weight (kDa)

6.09

Isoelectric Point (pI)

37.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09010 AT4G09010 AT4G09010
fragaria_vesca	FvH4_5g36620
malus_domestica	MD15G1373900.v1.1
prunus_persica	Prupe.1G522500_v2.0.a1
pyrus_communis	pycom15g33500
rosa_chinensis	RchiOBHm_Chr7g0242391 RchiOBHm_Chr7g0242541
rosa_laevigata	RLG00000000895
rosa_roxburghii	Rroxscaffold_3G00222710
rosa_rugosa	Rorug07G0315200
rosa_samantha	Rh7AG470700 Rh7BG440600 Rh7CG487300 Rh7DG455800
rosa_wichuraiana	Rw0G009520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	185
AccI	GTMKAC	1 cut(s)	1004
AciI	CCGC	1 cut(s)	799
AclWI	GGATC	3 cut(s)	421, 541, 863
AcsI	RAATTY	4 cut(s)	278, 475, 631, 685
AcuI	CTGAAG	1 cut(s)	894
AdeI	CACNNNGTG	1 cut(s)	566
AfiI	CCNNNNNNNGG	1 cut(s)	790
AgsI	TTSAA	8 cut(s)	128, 233, 288, 393, 475, 657, 680, 766
AjnI	CCWGG	1 cut(s)	705
AjuI	GAANNNNNNNTTGG	2 cut(s)	672, 704
AluBI	AGCT	6 cut(s)	216, 314, 429, 805, 809, 863
AluI	AGCT	6 cut(s)	216, 314, 429, 805, 809, 863
Alw26I	GTCTC	2 cut(s)	13, 324
AlwI	GGATC	3 cut(s)	421, 541, 863
ApeKI	GCWGC	7 cut(s)	68, 245, 467, 557, 590, 593, 863
ApoI	RAATTY	4 cut(s)	278, 475, 631, 685
Asp700I	GAANNNNTTC	1 cut(s)	879
AspS9I	GGNCC	4 cut(s)	404, 524, 794, 830
AsuNHI	GCTAGC	1 cut(s)	805
AvaII	GGWCC	4 cut(s)	404, 524, 794, 830
BanI	GGYRCC	1 cut(s)	185
BanII	GRGCYC	1 cut(s)	462
BbvCI	CCTCAGC	1 cut(s)	240
BbvI	GCAGC	7 cut(s)	55, 232, 454, 569, 577, 580, 850
BccI	CCATC	1 cut(s)	349
BciT130I	CCWGG	1 cut(s)	707
BciVI	GTATCC	1 cut(s)	931
BclI	TGATCA	2 cut(s)	835, 948
BcoDI	GTCTC	2 cut(s)	13, 324
BfaI	CTAG	1 cut(s)	806
BfuI	GTATCC	1 cut(s)	931
BisI	GCNGC	7 cut(s)	69, 246, 468, 558, 591, 594, 864
BlsI	GCNGC	7 cut(s)	70, 247, 469, 559, 592, 595, 865
Bme1390I	CCNGG	1 cut(s)	707
Bme18I	GGWCC	4 cut(s)	404, 524, 794, 830
BmgT120I	GGNCC	4 cut(s)	404, 524, 794, 830
BmiI	GGNNCC	9 cut(s)	82, 187, 405, 526, 711, 732, 795, 796, 831
BmrFI	CCNGG	1 cut(s)	707
BmrI	ACTGGG	1 cut(s)	730
BmsI	GCATC	1 cut(s)	358
BmtI	GCTAGC	1 cut(s)	809
BmuI	ACTGGG	1 cut(s)	730
BpmI	CTGGAG	1 cut(s)	67
Bpu10I	CCTNAGC	2 cut(s)	217, 240
BsaJI	CCNNGG	4 cut(s)	516, 705, 784, 884
Bsc4I	CCNNNNNNNGG	1 cut(s)	790
Bse1I	ACTGG	2 cut(s)	736, 1013
Bse3DI	GCAATG	1 cut(s)	63
BseBI	CCWGG	1 cut(s)	707
BseDI	CCNNGG	4 cut(s)	516, 705, 784, 884
BseGI	GGATG	1 cut(s)	341
BseLI	CCNNNNNNNGG	1 cut(s)	790
BseMI	GCAATG	1 cut(s)	63
BseMII	CTCAG	4 cut(s)	231, 231, 444, 959
BseNI	ACTGG	2 cut(s)	736, 1013
BseXI	GCAGC	7 cut(s)	55, 232, 454, 569, 577, 580, 850
BsgI	GTGCAG	1 cut(s)	776
BshNI	GGYRCC	1 cut(s)	185
BslFI	GGGAC	7 cut(s)	11, 38, 179, 417, 755, 807, 993
BslI	CCNNNNNNNGG	1 cut(s)	790
BsmAI	GTCTC	2 cut(s)	13, 324
BsmFI	GGGAC	7 cut(s)	11, 38, 179, 417, 755, 807, 993
BsmI	GAATGC	1 cut(s)	821
Bsp1286I	GDGCHC	1 cut(s)	462
Bsp143I	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
Bsp19I	CCATGG	1 cut(s)	884
BspACI	CCGC	1 cut(s)	799
BspCNI	CTCAG	4 cut(s)	230, 232, 443, 960
BspLI	GGNNCC	9 cut(s)	82, 187, 405, 526, 711, 732, 795, 796, 831
BspOI	GCTAGC	1 cut(s)	809
BspPI	GGATC	3 cut(s)	421, 541, 863
BspT107I	GGYRCC	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	63
BsrI	ACTGG	2 cut(s)	736, 1013
BssECI	CCNNGG	4 cut(s)	516, 705, 784, 884
BssMI	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
BssNAI	GTATAC	1 cut(s)	1005
BssT1I	CCWWGG	3 cut(s)	516, 784, 884
Bst1107I	GTATAC	1 cut(s)	1005
Bst2UI	CCWGG	1 cut(s)	707
Bst4CI	ACNGT	3 cut(s)	25, 97, 919
Bst6I	CTCTTC	1 cut(s)	615
BstAPI	GCANNNNNTGC	1 cut(s)	566
BstC8I	GCNNGC	2 cut(s)	803, 807
BstDEI	CTNAG	4 cut(s)	217, 240, 430, 968
BstDSI	CCRYGG	1 cut(s)	884
BstF5I	GGATG	1 cut(s)	341
BstKTI	GATC	8 cut(s)	253, 416, 544, 549, 838, 871, 946, 951
BstMAI	GTCTC	2 cut(s)	13, 324
BstMBI	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
BstMWI	GCNNNNNNNGC	3 cut(s)	245, 320, 566
BstNI	CCWGG	1 cut(s)	707
BstSCI	CCNGG	1 cut(s)	705
BstV1I	GCAGC	7 cut(s)	55, 232, 454, 569, 577, 580, 850
BstX2I	RGATCY	1 cut(s)	413
BstXI	CCANNNNNNTGG	1 cut(s)	199
BstYI	RGATCY	1 cut(s)	413
BstZ17I	GTATAC	1 cut(s)	1005
BsuI	GTATCC	1 cut(s)	931
BtgI	CCRYGG	1 cut(s)	884
BtsCI	GGATG	1 cut(s)	341
BtsI	GCAGTG	2 cut(s)	462, 642
BtsIMutI	CAGTG	5 cut(s)	359, 462, 642, 671, 743
Cac8I	GCNNGC	2 cut(s)	803, 807
Cfr13I	GGNCC	4 cut(s)	404, 524, 794, 830
CviAII	CATG	2 cut(s)	199, 885
DdeI	CTNAG	4 cut(s)	217, 240, 430, 968
DpnI	GATC	8 cut(s)	252, 415, 543, 548, 837, 870, 945, 950
DpnII	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
DraIII	CACNNNGTG	1 cut(s)	566
Eam1104I	CTCTTC	1 cut(s)	615
EarI	CTCTTC	1 cut(s)	615
Eco130I	CCWWGG	3 cut(s)	516, 784, 884
Eco24I	GRGCYC	1 cut(s)	462
Eco47I	GGWCC	4 cut(s)	404, 524, 794, 830
Eco57I	CTGAAG	1 cut(s)	894
EcoO109I	RGGNCCY	2 cut(s)	794, 830
EcoRII	CCWGG	1 cut(s)	705
EcoT14I	CCWWGG	3 cut(s)	516, 784, 884
EcoT38I	GRGCYC	1 cut(s)	462
ErhI	CCWWGG	3 cut(s)	516, 784, 884
FaeI	CATG	2 cut(s)	202, 888
FalI	AAGNNNNNCTT	2 cut(s)	566, 598
FaqI	GGGAC	7 cut(s)	11, 38, 179, 417, 755, 807, 993
FatI	CATG	2 cut(s)	198, 884
FauI	CCCGC	1 cut(s)	806
FauNDI	CATATG	1 cut(s)	649
FbaI	TGATCA	2 cut(s)	835, 948
FblI	GTMKAC	1 cut(s)	1004
Fnu4HI	GCNGC	7 cut(s)	69, 246, 468, 558, 591, 594, 864
FokI	GGATG	1 cut(s)	328
FriOI	GRGCYC	1 cut(s)	462
Fsp4HI	GCNGC	7 cut(s)	69, 246, 468, 558, 591, 594, 864
FspBI	CTAG	1 cut(s)	806
GluI	GCNGC	7 cut(s)	69, 246, 468, 558, 591, 594, 864
GsuI	CTGGAG	1 cut(s)	67
Hin1II	CATG	2 cut(s)	202, 888
HinfI	GANTC	1 cut(s)	423
Hpy166II	GTNNAC	2 cut(s)	524, 1005
Hpy188I	TCNGA	8 cut(s)	255, 277, 422, 433, 546, 894, 925, 948
Hpy188III	TCNNGA	5 cut(s)	84, 219, 329, 833, 872
Hpy8I	GTNNAC	2 cut(s)	524, 1005
HpyAV	CCTTC	6 cut(s)	22, 39, 490, 619, 720, 760
HpyCH4III	ACNGT	3 cut(s)	25, 97, 919
HpyCH4IV	ACGT	1 cut(s)	904
HpyCH4V	TGCA	4 cut(s)	596, 647, 757, 821
HpyF10VI	GCNNNNNNNGC	3 cut(s)	245, 320, 566
HpyF3I	CTNAG	4 cut(s)	217, 240, 430, 968
HpySE526I	ACGT	1 cut(s)	904
Hsp92II	CATG	2 cut(s)	202, 888
KflI	GGGWCCC	1 cut(s)	794
Ksp22I	TGATCA	2 cut(s)	835, 948
Kzo9I	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
LmnI	GCTCC	3 cut(s)	86, 696, 709
Lsp1109I	GCAGC	7 cut(s)	55, 232, 454, 569, 577, 580, 850
LweI	GCATC	1 cut(s)	358
MaeI	CTAG	1 cut(s)	806
MaeII	ACGT	1 cut(s)	904
MaeIII	GTNAC	1 cut(s)	103
MalI	GATC	8 cut(s)	252, 415, 543, 548, 837, 870, 945, 950
MboI	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
MboII	GAAGA	2 cut(s)	497, 632
MflI	RGATCY	1 cut(s)	413
MhlI	GDGCHC	1 cut(s)	462
MnlI	CCTC	9 cut(s)	66, 85, 139, 156, 235, 605, 715, 931, 991
MroXI	GAANNNNTTC	1 cut(s)	879
MslI	CAYNNNNRTG	1 cut(s)	197
MspR9I	CCNGG	1 cut(s)	707
Mva1269I	GAATGC	1 cut(s)	821
MvaI	CCWGG	1 cut(s)	707
MwoI	GCNNNNNNNGC	3 cut(s)	245, 320, 566
NcoI	CCATGG	1 cut(s)	884
NdeI	CATATG	1 cut(s)	649
NdeII	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
NheI	GCTAGC	1 cut(s)	805
NlaIII	CATG	2 cut(s)	202, 888
NlaIV	GGNNCC	9 cut(s)	82, 187, 405, 526, 711, 732, 795, 796, 831
NmeAIII	GCCGAG	1 cut(s)	935
PcsI	WCGNNNNNNNCGW	1 cut(s)	268
PctI	GAATGC	1 cut(s)	821
PdmI	GAANNNNTTC	1 cut(s)	879
PfeI	GAWTC	1 cut(s)	423
PkrI	GCNGC	7 cut(s)	70, 247, 469, 559, 592, 595, 865
PpuMI	RGGWCCY	2 cut(s)	794, 830
Psp5II	RGGWCCY	2 cut(s)	794, 830
Psp6I	CCWGG	1 cut(s)	705
PspGI	CCWGG	1 cut(s)	705
PspN4I	GGNNCC	9 cut(s)	82, 187, 405, 526, 711, 732, 795, 796, 831
PspPI	GGNCC	4 cut(s)	404, 524, 794, 830
PspPPI	RGGWCCY	2 cut(s)	794, 830
PsuI	RGATCY	1 cut(s)	413
RseI	CAYNNNNRTG	1 cut(s)	197
SatI	GCNGC	7 cut(s)	69, 246, 468, 558, 591, 594, 864
Sau3AI	GATC	8 cut(s)	250, 413, 541, 546, 835, 868, 943, 948
Sau96I	GGNCC	4 cut(s)	404, 524, 794, 830
ScrFI	CCNGG	1 cut(s)	707
SduI	GDGCHC	1 cut(s)	462
SfaNI	GCATC	1 cut(s)	358
SinI	GGWCC	4 cut(s)	404, 524, 794, 830
SmiMI	CAYNNNNRTG	1 cut(s)	197
SsiI	CCGC	1 cut(s)	799
SspMI	CTAG	1 cut(s)	806
StyD4I	CCNGG	1 cut(s)	705
StyI	CCWWGG	3 cut(s)	516, 784, 884
TaaI	ACNGT	3 cut(s)	25, 97, 919
TaiI	ACGT	1 cut(s)	907
TaqI	TCGA	1 cut(s)	328
TfiI	GAWTC	1 cut(s)	423
TscAI	CASTG	5 cut(s)	366, 469, 649, 671, 743
TseI	GCWGC	7 cut(s)	68, 245, 467, 557, 590, 593, 863
TspDTI	ATGAA	3 cut(s)	146, 469, 633
TspGWI	ACGGA	1 cut(s)	709
TspRI	CASTG	5 cut(s)	366, 469, 649, 671, 743
VpaK11BI	GGWCC	4 cut(s)	404, 524, 794, 830
XapI	RAATTY	4 cut(s)	278, 475, 631, 685
XcmI	CCANNNNNNNNNTGG	1 cut(s)	196
XmiI	GTMKAC	1 cut(s)	1004
XmnI	GAANNNNTTC	1 cut(s)	879
XspI	CTAG	1 cut(s)	806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.