Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0020945

Physical Location & Seq

Genomic Coordinates Reverse (-)

46928024 .. 46929082

Gene Structure 1059 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G576200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGGTGGACTTTGATTATGATCAACTTGTGAAGGCAACAGAAAGCTTCTCTCCAACTAAGCTCATTGGCAAAGGAAGCCATGGCATGGTGTACAAAGCCATACTAGTCAACAAACTGGTTGCCATAAAGAAGCCACTTGATCAATATCATGCCCATCAAGTATCACTCCTTAAGCTCGACAATGAGATATGTGTATTGTCTTCTCTACCCGAAAGCCCACATGTTATAAGCCTTCTTGGAACAAGTCATCAAGACTCAAACAAGAACAAGCTCCTTGTCATGGAGTTCATGCCCAATGGCTCTCTCCACGACCTACTTCATGTTGCATCCACACCCCCTCCATGGCCTAAACGTGTGGAAATCGCCATTCGTGTTGCCCGGGCTGTCCAATTTCTTCACCAAGGGGAACCTATGGTGATCCACAGAGACGTCAAGTCGGCAAACATTTTGTTCGATTCAGATTGGAATGCCAAGTTGGCGGACTTTGGACTTGCCGTGCTCTTGCGAGTCGACTCGCCGAGTCACCCGAGTGAACCCGCTGCAGGTACTATTGGATACTTGGACCCTTGTTACACCACTCCTAGCAAACTAAGTACCAAGAATGATGTGTTTAGTTTTGGCGTTGTGTTGTTGGAGATTATAAGTTCAAGGAAAGTCATTGACATCTATAAATCACCAGCTTCAATAGTGGATTGGGCAATTCCATTAATCAAAGAGCAAAGGATAGAACAAATTTGTGATGCAAGGCTAGGGTTGCCCACGTACATGTCAAGCACAATAAGGCACATGTTAAATGTGGCAGCAAGCTGTGTCTCATCAGATGTAGCATGTCGTCCAACAATGATGGACGTTGTTAAGGAGATCGAAAATTGTTTTATCGAACGAGTTAGGTTACCGATTTGGAGTAACATGCTGAGGAGTTTGGTGCCCATGAGGATGAAAAAATTAGCAAAAAGTTTGCAGCAGGCAAAGTGTGCAACAGAACAAAGTGATGCCGATGTTCCAAGTGGGAAGCTATTGTTGTGGCAGGTTTTGGATGATGCTGCAGATATTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

353

Amino Acids

39.06

Weight (kDa)

7.16

Isoelectric Point (pI)

47.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0020945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23170
malus_domestica	MD08G1239700.v1.1 MD15G1431200.v1.1
prunus_persica	Prupe.1G576200_v2.0.a1
pyrus_communis	pycom08g20790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	227, 641
AatII	GACGTC	1 cut(s)	432
Acc36I	ACCTGC	2 cut(s)	533, 1018
AccB1I	GGYRCC	1 cut(s)	925
AccB7I	CCANNNNNTGG	1 cut(s)	85
AccI	GTMKAC	1 cut(s)	510
AciI	CCGC	2 cut(s)	479, 537
AclWI	GGATC	1 cut(s)	412
AcsI	RAATTY	1 cut(s)	732
AcyI	GRCGYC	1 cut(s)	429
AfaI	GTAC	4 cut(s)	92, 547, 595, 764
AfiI	CCNNNNNNNGG	4 cut(s)	85, 280, 342, 542
AflII	CTTAAG	1 cut(s)	170
AflIII	ACRYGT	4 cut(s)	220, 352, 765, 786
AgsI	TTSAA	2 cut(s)	648, 684
AhdI	GACNNNNNGTC	1 cut(s)	433
AhlI	ACTAGT	1 cut(s)	103
AjuI	GAANNNNNNNTTGG	2 cut(s)	458, 490
AleI	CACNNNNGTG	1 cut(s)	528
AluBI	AGCT	7 cut(s)	45, 61, 175, 271, 680, 807, 1015
AluI	AGCT	7 cut(s)	45, 61, 175, 271, 680, 807, 1015
Alw21I	GWGCWC	1 cut(s)	501
Alw26I	GTCTC	2 cut(s)	420, 817
AlwI	GGATC	1 cut(s)	412
Ama87I	CYCGRG	2 cut(s)	378, 526
AoxI	GGCC	1 cut(s)	344
ApeKI	GCWGC	4 cut(s)	539, 800, 961, 1043
ApoI	RAATTY	1 cut(s)	732
AseI	ATTAAT	1 cut(s)	707
AspS9I	GGNCC	1 cut(s)	562
AsuC2I	CCSGG	2 cut(s)	379, 380
AsuHPI	GGTGA	4 cut(s)	389, 427, 515, 666
AvaI	CYCGRG	2 cut(s)	378, 526
AvaII	GGWCC	1 cut(s)	562
BaeGI	GKGCMC	1 cut(s)	930
BanI	GGYRCC	1 cut(s)	925
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	1 cut(s)	501
BbvCI	CCTCAGC	1 cut(s)	914
BbvI	GCAGC	4 cut(s)	526, 812, 973, 1030
BccI	CCATC	2 cut(s)	162, 838
BceAI	ACGGC	1 cut(s)	479
BciVI	GTATCC	1 cut(s)	548
BclI	TGATCA	2 cut(s)	19, 139
BcnI	CCSGG	2 cut(s)	379, 380
BcoDI	GTCTC	2 cut(s)	420, 817
BcuI	ACTAGT	1 cut(s)	103
BfaI	CTAG	3 cut(s)	104, 582, 749
BfmI	CTRYAG	2 cut(s)	540, 1044
BfrI	CTTAAG	1 cut(s)	170
BfuAI	ACCTGC	2 cut(s)	533, 1018
BfuI	GTATCC	1 cut(s)	548
BglI	GCCNNNNNGGC	1 cut(s)	476
BisI	GCNGC	4 cut(s)	540, 801, 962, 1044
BlsI	GCNGC	4 cut(s)	541, 802, 963, 1045
Bme1390I	CCNGG	2 cut(s)	379, 380
Bme18I	GGWCC	1 cut(s)	562
BmeRI	GACNNNNNGTC	1 cut(s)	433
BmeT110I	CYCGRG	2 cut(s)	378, 526
BmgT120I	GGNCC	1 cut(s)	562
BmiI	GGNNCC	3 cut(s)	408, 564, 927
BmrFI	CCNGG	2 cut(s)	379, 380
BmsI	GCATC	4 cut(s)	335, 730, 982, 1030
BpiI	GAAGAC	1 cut(s)	192
Bpu10I	CCTNAGC	1 cut(s)	914
BpuMI	CCSGG	2 cut(s)	379, 380
BsaAI	YACGTR	1 cut(s)	762
BsaBI	GATNNNNATC	2 cut(s)	18, 144
BsaHI	GRCGYC	1 cut(s)	429
BsaJI	CCNNGG	4 cut(s)	79, 341, 378, 400
BsaXI	ACNNNNNCTCC	2 cut(s)	322, 352
Bsc4I	CCNNNNNNNGG	4 cut(s)	85, 280, 342, 542
Bse1I	ACTGG	1 cut(s)	120
Bse8I	GATNNNNATC	2 cut(s)	18, 144
BseDI	CCNNGG	4 cut(s)	79, 341, 378, 400
BseGI	GGATG	3 cut(s)	326, 942, 1042
BseJI	GATNNNNATC	2 cut(s)	18, 144
BseLI	CCNNNNNNNGG	4 cut(s)	85, 280, 342, 542
BseMII	CTCAG	1 cut(s)	905
BseNI	ACTGG	1 cut(s)	120
BseRI	GAGGAG	1 cut(s)	931
BseSI	GKGCMC	1 cut(s)	930
BseXI	GCAGC	4 cut(s)	526, 812, 973, 1030
BshFI	GGCC	1 cut(s)	346
BshNI	GGYRCC	1 cut(s)	925
BsiHKAI	GWGCWC	1 cut(s)	501
BsiHKCI	CYCGRG	2 cut(s)	378, 526
BsiSI	CCGG	1 cut(s)	379
BslI	CCNNNNNNNGG	4 cut(s)	85, 280, 342, 542
BsmAI	GTCTC	2 cut(s)	420, 817
BsmBI	CGTCTC	1 cut(s)	420
BsmI	GAATGC	1 cut(s)	472
BsnI	GGCC	1 cut(s)	346
BsoBI	CYCGRG	2 cut(s)	378, 526
Bsp1286I	GDGCHC	2 cut(s)	501, 930
Bsp1407I	TGTACA	1 cut(s)	90
Bsp143I	GATC	4 cut(s)	19, 139, 417, 861
Bsp19I	CCATGG	2 cut(s)	79, 341
BspACI	CCGC	2 cut(s)	479, 537
BspANI	GGCC	1 cut(s)	346
BspCNI	CTCAG	1 cut(s)	906
BspLI	GGNNCC	3 cut(s)	408, 564, 927
BspMAI	CTGCAG	2 cut(s)	544, 1048
BspMI	ACCTGC	2 cut(s)	533, 1018
BspPI	GGATC	1 cut(s)	412
BspT107I	GGYRCC	1 cut(s)	925
BspTI	CTTAAG	1 cut(s)	170
BsrGI	TGTACA	1 cut(s)	90
BsrI	ACTGG	1 cut(s)	120
BssECI	CCNNGG	4 cut(s)	79, 341, 378, 400
BssMI	GATC	4 cut(s)	19, 139, 417, 861
BssNI	GRCGYC	1 cut(s)	429
BssT1I	CCWWGG	3 cut(s)	79, 341, 400
BstACI	GRCGYC	1 cut(s)	429
BstAFI	CTTAAG	1 cut(s)	170
BstAPI	GCANNNNNTGC	1 cut(s)	974
BstAUI	TGTACA	1 cut(s)	90
BstBAI	YACGTR	1 cut(s)	762
BstC8I	GCNNGC	2 cut(s)	805, 966
BstDEI	CTNAG	3 cut(s)	57, 590, 914
BstDSI	CCRYGG	2 cut(s)	79, 341
BstEII	GGTNACC	1 cut(s)	891
BstF5I	GGATG	3 cut(s)	326, 942, 1042
BstKTI	GATC	4 cut(s)	22, 142, 420, 864
BstMAI	GTCTC	2 cut(s)	420, 817
BstMBI	GATC	4 cut(s)	19, 139, 417, 861
BstMWI	GCNNNNNNNGC	4 cut(s)	75, 476, 754, 974
BstNSI	RCATGY	5 cut(s)	224, 769, 790, 831, 913
BstPI	GGTNACC	1 cut(s)	891
BstSCI	CCNGG	2 cut(s)	377, 378
BstSFI	CTRYAG	2 cut(s)	540, 1044
BstSLI	GKGCMC	1 cut(s)	930
BstV1I	GCAGC	4 cut(s)	526, 812, 973, 1030
BstV2I	GAAGAC	1 cut(s)	192
BsuI	GTATCC	1 cut(s)	548
BsuRI	GGCC	1 cut(s)	346
BtgI	CCRYGG	2 cut(s)	79, 341
BtsCI	GGATG	3 cut(s)	326, 942, 1042
BveI	ACCTGC	2 cut(s)	533, 1018
Cac8I	GCNNGC	2 cut(s)	805, 966
Cfr13I	GGNCC	1 cut(s)	562
Cfr9I	CCCGGG	1 cut(s)	378
Csp6I	GTAC	4 cut(s)	91, 546, 594, 763
CviQI	GTAC	4 cut(s)	91, 546, 594, 763
DdeI	CTNAG	3 cut(s)	57, 590, 914
DpnI	GATC	4 cut(s)	21, 141, 419, 863
DpnII	GATC	4 cut(s)	19, 139, 417, 861
DriI	GACNNNNNGTC	1 cut(s)	433
Eam1105I	GACNNNNNGTC	1 cut(s)	433
EciI	GGCGGA	1 cut(s)	494
Eco130I	CCWWGG	3 cut(s)	79, 341, 400
Eco47I	GGWCC	1 cut(s)	562
Eco88I	CYCGRG	2 cut(s)	378, 526
Eco91I	GGTNACC	1 cut(s)	891
EcoO65I	GGTNACC	1 cut(s)	891
EcoT14I	CCWWGG	3 cut(s)	79, 341, 400
ErhI	CCWWGG	3 cut(s)	79, 341, 400
Esp3I	CGTCTC	1 cut(s)	420
FauI	CCCGC	1 cut(s)	544
FbaI	TGATCA	2 cut(s)	19, 139
FblI	GTMKAC	1 cut(s)	510
Fnu4HI	GCNGC	4 cut(s)	540, 801, 962, 1044
FokI	GGATG	3 cut(s)	313, 949, 1049
Fsp4HI	GCNGC	4 cut(s)	540, 801, 962, 1044
FspBI	CTAG	3 cut(s)	104, 582, 749
GluI	GCNGC	4 cut(s)	540, 801, 962, 1044
HaeIII	GGCC	1 cut(s)	346
HapII	CCGG	1 cut(s)	379
Hin1I	GRCGYC	1 cut(s)	429
HincII	GTYRAC	2 cut(s)	109, 511
HindII	GTYRAC	2 cut(s)	109, 511
HindIII	AAGCTT	1 cut(s)	43
HinfI	GANTC	5 cut(s)	254, 455, 507, 512, 520
HpaII	CCGG	1 cut(s)	379
HphI	GGTGA	4 cut(s)	389, 427, 515, 666
Hpy166II	GTNNAC	5 cut(s)	7, 91, 109, 511, 533
Hpy188I	TCNGA	2 cut(s)	460, 820
Hpy188III	TCNNGA	1 cut(s)	251
Hpy8I	GTNNAC	5 cut(s)	7, 91, 109, 511, 533
HpyAV	CCTTC	2 cut(s)	25, 242
HpyCH4IV	ACGT	4 cut(s)	352, 429, 761, 849
HpyCH4V	TGCA	6 cut(s)	326, 542, 743, 961, 977, 1046
HpyF10VI	GCNNNNNNNGC	4 cut(s)	75, 476, 754, 974
HpyF3I	CTNAG	3 cut(s)	57, 590, 914
HpySE526I	ACGT	4 cut(s)	352, 429, 761, 849
Hsp92I	GRCGYC	1 cut(s)	429
Ksp22I	TGATCA	2 cut(s)	19, 139
Kzo9I	GATC	4 cut(s)	19, 139, 417, 861
LmnI	GCTCC	1 cut(s)	276
LpnPI	CCDG	6 cut(s)	101, 392, 528, 690, 950, 1013
Lsp1109I	GCAGC	4 cut(s)	526, 812, 973, 1030
LweI	GCATC	4 cut(s)	335, 730, 982, 1030
MaeI	CTAG	3 cut(s)	104, 582, 749
MaeII	ACGT	4 cut(s)	352, 429, 761, 849
MaeIII	GTNAC	4 cut(s)	521, 569, 891, 905
MalI	GATC	4 cut(s)	21, 141, 419, 863
MboI	GATC	4 cut(s)	19, 139, 417, 861
MboII	GAAGA	2 cut(s)	192, 386
MhlI	GDGCHC	2 cut(s)	501, 930
MluCI	AATT	5 cut(s)	389, 699, 732, 868, 944
MlyI	GAGTC	4 cut(s)	248, 506, 516, 529
MmeI	TCCRAC	3 cut(s)	77, 612, 860
MnlI	CCTC	3 cut(s)	348, 909, 927
MseI	TTAA	4 cut(s)	171, 707, 791, 855
MslI	CAYNNNNRTG	3 cut(s)	528, 764, 935
MspA1I	CMGCKG	1 cut(s)	539
MspCI	CTTAAG	1 cut(s)	170
MspI	CCGG	1 cut(s)	379
MspR9I	CCNGG	2 cut(s)	379, 380
Mva1269I	GAATGC	1 cut(s)	472
MwoI	GCNNNNNNNGC	4 cut(s)	75, 476, 754, 974
NciI	CCSGG	2 cut(s)	379, 380
NcoI	CCATGG	2 cut(s)	79, 341
NdeII	GATC	4 cut(s)	19, 139, 417, 861
NlaIV	GGNNCC	3 cut(s)	408, 564, 927
NmeAIII	GCCGAG	1 cut(s)	543
NmuCI	GTSAC	1 cut(s)	521
NspI	RCATGY	5 cut(s)	224, 769, 790, 831, 913
OliI	CACNNNNGTG	1 cut(s)	528
PciI	ACATGT	3 cut(s)	220, 765, 786
PctI	GAATGC	1 cut(s)	472
PfeI	GAWTC	1 cut(s)	455
PflMI	CCANNNNNTGG	1 cut(s)	85
PkrI	GCNGC	4 cut(s)	541, 802, 963, 1045
PleI	GAGTC	4 cut(s)	248, 506, 515, 528
PpsI	GAGTC	4 cut(s)	248, 506, 515, 528
Ppu21I	YACGTR	1 cut(s)	762
PscI	ACATGT	3 cut(s)	220, 765, 786
PshBI	ATTAAT	1 cut(s)	707
PsiI	TTATAA	2 cut(s)	227, 641
PspEI	GGTNACC	1 cut(s)	891
PspN4I	GGNNCC	3 cut(s)	408, 564, 927
PspPI	GGNCC	1 cut(s)	562
PstI	CTGCAG	2 cut(s)	544, 1048
RsaI	GTAC	4 cut(s)	92, 547, 595, 764
RsaNI	GTAC	4 cut(s)	91, 546, 594, 763
RseI	CAYNNNNRTG	3 cut(s)	528, 764, 935
SalI	GTCGAC	1 cut(s)	509
SaqAI	TTAA	4 cut(s)	171, 707, 791, 855
SatI	GCNGC	4 cut(s)	540, 801, 962, 1044
Sau3AI	GATC	4 cut(s)	19, 139, 417, 861
Sau96I	GGNCC	1 cut(s)	562
SchI	GAGTC	4 cut(s)	248, 506, 516, 529
ScrFI	CCNGG	2 cut(s)	379, 380
SduI	GDGCHC	2 cut(s)	501, 930
SfaNI	GCATC	4 cut(s)	335, 730, 982, 1030
SfcI	CTRYAG	2 cut(s)	540, 1044
SinI	GGWCC	1 cut(s)	562
SmaI	CCCGGG	1 cut(s)	380
SmiMI	CAYNNNNRTG	3 cut(s)	528, 764, 935
SmlI	CTYRAG	1 cut(s)	170
SmoI	CTYRAG	1 cut(s)	170
SpeI	ACTAGT	1 cut(s)	103
SrfI	GCCCGGGC	1 cut(s)	380
Sse9I	AATT	5 cut(s)	389, 699, 732, 868, 944
SsiI	CCGC	2 cut(s)	479, 537
SspMI	CTAG	3 cut(s)	104, 582, 749
StyD4I	CCNGG	2 cut(s)	377, 378
StyI	CCWWGG	3 cut(s)	79, 341, 400
TaiI	ACGT	4 cut(s)	355, 432, 764, 852
TaqI	TCGA	5 cut(s)	177, 453, 510, 864, 879
TasI	AATT	5 cut(s)	389, 699, 732, 868, 944
TatI	WGTACW	1 cut(s)	90
TfiI	GAWTC	1 cut(s)	455
Tru1I	TTAA	4 cut(s)	171, 707, 791, 855
Tru9I	TTAA	4 cut(s)	171, 707, 791, 855
TseFI	GTSAC	1 cut(s)	521
TseI	GCWGC	4 cut(s)	539, 800, 961, 1043
Tsp45I	GTSAC	1 cut(s)	521
TspDTI	ATGAA	3 cut(s)	277, 308, 953
TspMI	CCCGGG	1 cut(s)	378
Van91I	CCANNNNNTGG	1 cut(s)	85
Vha464I	CTTAAG	1 cut(s)	170
VpaK11BI	GGWCC	1 cut(s)	562
VspI	ATTAAT	1 cut(s)	707
XapI	RAATTY	1 cut(s)	732
XceI	RCATGY	5 cut(s)	224, 769, 790, 831, 913
XmaI	CCCGGG	1 cut(s)	378
XmiI	GTMKAC	1 cut(s)	510
XspI	CTAG	3 cut(s)	104, 582, 749
ZraI	GACGTC	1 cut(s)	430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.