Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0015966

Physical Location & Seq

Genomic Coordinates Reverse (-)

23123047 .. 23127136

Gene Structure 4090 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G192000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 603 bp

ATGGGAGCAGTAACAGCACCAGCGCCATGGAAGCAGCTCCTTCTCAACGCAATGGAATCCAATGCCCACCTCAGGCACTCTTCCTACATTCAGCTTGCAACGATTGCTTGTAATGGGAGACCTTCAAATCGTACTGTTGTTTTCAGGGGATTTCAAGAGGATAGTGATAAGATTCAAATCAATACTGATGGCAGAAGTCGTAAGATTGAGGAGCTTAAGCATTGCCCTTTTGCTGAGATATGTTGGTACTTTACTGACTCTTGGGAGCAATTTCGGATCAATGGAACAGTTGATATTATTGATGGATCAAATCCCGACCCCATAAAACTTCAGCAAAGAGACAAATCGTGGGCTTCCAGTTCTCTTAAATCAAGACTGCAGTATTTGGGGCCCCAGCCAGGTCTTCCCAATCTAAGTGAAGAACCACCCAAGGAAGTCTCCGTAGATCCTTCTACAGGCCCGGTTGGTGCATTTTGTGTTCTTGTTCTAGACCCGCAACAGGTTGATTACTTGAACCTGAAGAGTAACCAGAGGCTAACGTTTGCATCCACTGGAAGTCCCAATGAAGAGAAGTGCTGGACTTCAGAAAGGGTCAACCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004733 GO:0006081 GO:0006725 GO:0006732 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009443 GO:0009987 GO:0016491 GO:0016638 GO:0016641 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0034641 GO:0042364 GO:0042816 GO:0042819 GO:0042822 GO:0042823 GO:0043094 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0046184 GO:0046483 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00750 ko01100 ko01120 map00750 map01100 map01120

Pfam Domains

Protein Families

Pyridox_oxase_2

Protein Analysis

201

Amino Acids

22.4

Weight (kDa)

5.94

Isoelectric Point (pI)

46.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46580
fragaria_vesca	FvH4_7g16970
malus_domestica	MD01G1084300.v1.1
prunus_persica	Prupe.2G192000_v2.0.a1 Prupe.2G192000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360221
rosa_laevigata	RLG00000027819
rosa_multiflora	Rmu_ssc0000368.1_g000051
rosa_roxburghii	Rroxscaffold_4G00296280
rosa_rugosa	Rorug01G0276100
rosa_samantha	Rh1AG289800 Rh1BG255400 Rh1CG272700 Rh1DG285000
rosa_wichuraiana	Rw1G025710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	494
AclI	AACGTT	1 cut(s)	539
AclWI	GGATC	3 cut(s)	284, 313, 440
AcuI	CTGAAG	3 cut(s)	314, 539, 567
AfaI	GTAC	2 cut(s)	133, 248
AfiI	CCNNNNNNNGG	4 cut(s)	72, 398, 455, 499
AflII	CTTAAG	1 cut(s)	215
AgsI	TTSAA	4 cut(s)	126, 155, 176, 514
AjnI	CCWGG	1 cut(s)	397
AluBI	AGCT	3 cut(s)	37, 94, 214
AluI	AGCT	3 cut(s)	37, 94, 214
Alw26I	GTCTC	3 cut(s)	112, 333, 442
AlwI	GGATC	3 cut(s)	284, 313, 440
AoxI	GGCC	2 cut(s)	389, 457
ApaI	GGGCCC	1 cut(s)	393
ApeKI	GCWGC	1 cut(s)	34
AspLEI	GCGC	1 cut(s)	25
AspS9I	GGNCC	3 cut(s)	389, 390, 458
AsuC2I	CCSGG	1 cut(s)	461
AxyI	CCTNAGG	1 cut(s)	71
BaeGI	GKGCMC	1 cut(s)	393
BanII	GRGCYC	1 cut(s)	393
BbsI	GAAGAC	1 cut(s)	395
BbvI	GCAGC	1 cut(s)	46
BccI	CCATC	2 cut(s)	182, 296
BciT130I	CCWGG	1 cut(s)	399
BcnI	CCSGG	1 cut(s)	461
BcoDI	GTCTC	3 cut(s)	112, 333, 442
BfaI	CTAG	1 cut(s)	488
BfmI	CTRYAG	2 cut(s)	377, 453
BfoI	RGCGCY	1 cut(s)	26
BfrI	CTTAAG	1 cut(s)	215
BisI	GCNGC	1 cut(s)	35
BlsI	GCNGC	1 cut(s)	36
Bme1390I	CCNGG	2 cut(s)	399, 461
BmgT120I	GGNCC	3 cut(s)	389, 390, 458
BmiI	GGNNCC	3 cut(s)	390, 391, 392
BmrFI	CCNGG	2 cut(s)	399, 461
BmsI	GCATC	1 cut(s)	554
BpiI	GAAGAC	1 cut(s)	395
BpuMI	CCSGG	1 cut(s)	461
BsaBI	GATNNNNATC	1 cut(s)	176
BsaI	GGTCTC	1 cut(s)	112
BsaJI	CCNNGG	2 cut(s)	26, 429
Bsc4I	CCNNNNNNNGG	4 cut(s)	72, 398, 455, 499
Bse1I	ACTGG	2 cut(s)	357, 556
Bse21I	CCTNAGG	1 cut(s)	71
Bse3DI	GCAATG	2 cut(s)	57, 220
Bse8I	GATNNNNATC	1 cut(s)	176
BseBI	CCWGG	1 cut(s)	399
BseDI	CCNNGG	2 cut(s)	26, 429
BseGI	GGATG	1 cut(s)	545
BseJI	GATNNNNATC	1 cut(s)	176
BseLI	CCNNNNNNNGG	4 cut(s)	72, 398, 455, 499
BseMI	GCAATG	2 cut(s)	57, 220
BseMII	CTCAG	2 cut(s)	85, 225
BseNI	ACTGG	2 cut(s)	357, 556
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	1 cut(s)	393
BseXI	GCAGC	1 cut(s)	46
BseYI	CCCAGC	1 cut(s)	393
BshFI	GGCC	2 cut(s)	391, 459
BsiSI	CCGG	1 cut(s)	461
BslFI	GGGAC	1 cut(s)	543
BslI	CCNNNNNNNGG	4 cut(s)	72, 398, 455, 499
BsmAI	GTCTC	3 cut(s)	112, 333, 442
BsmFI	GGGAC	1 cut(s)	543
BsnI	GGCC	2 cut(s)	391, 459
Bso31I	GGTCTC	1 cut(s)	112
Bsp120I	GGGCCC	1 cut(s)	389
Bsp1286I	GDGCHC	1 cut(s)	393
Bsp143I	GATC	3 cut(s)	276, 305, 445
Bsp19I	CCATGG	1 cut(s)	26
BspACI	CCGC	1 cut(s)	494
BspANI	GGCC	2 cut(s)	391, 459
BspCNI	CTCAG	2 cut(s)	84, 226
BspLI	GGNNCC	3 cut(s)	390, 391, 392
BspMAI	CTGCAG	1 cut(s)	381
BspPI	GGATC	3 cut(s)	284, 313, 440
BspTI	CTTAAG	1 cut(s)	215
BspTNI	GGTCTC	1 cut(s)	112
BsrDI	GCAATG	2 cut(s)	57, 220
BsrI	ACTGG	2 cut(s)	357, 556
BssECI	CCNNGG	2 cut(s)	26, 429
BssMI	GATC	3 cut(s)	276, 305, 445
BssT1I	CCWWGG	2 cut(s)	26, 429
Bst2UI	CCWGG	1 cut(s)	399
Bst4CI	ACNGT	2 cut(s)	136, 289
Bst6I	CTCTTC	3 cut(s)	85, 515, 561
BstAFI	CTTAAG	1 cut(s)	215
BstAPI	GCANNNNNTGC	1 cut(s)	104
BstC8I	GCNNGC	1 cut(s)	96
BstDEI	CTNAG	3 cut(s)	71, 234, 413
BstDSI	CCRYGG	1 cut(s)	26
BstENI	CCTNNNNNAGG	1 cut(s)	453
BstF5I	GGATG	1 cut(s)	545
BstH2I	RGCGCY	1 cut(s)	26
BstHHI	GCGC	1 cut(s)	25
BstKTI	GATC	3 cut(s)	279, 308, 448
BstMAI	GTCTC	3 cut(s)	112, 333, 442
BstMBI	GATC	3 cut(s)	276, 305, 445
BstMWI	GCNNNNNNNGC	3 cut(s)	14, 31, 104
BstNI	CCWGG	1 cut(s)	399
BstSCI	CCNGG	2 cut(s)	397, 459
BstSFI	CTRYAG	2 cut(s)	377, 453
BstSLI	GKGCMC	1 cut(s)	393
BstV1I	GCAGC	1 cut(s)	46
BstV2I	GAAGAC	1 cut(s)	395
BstX2I	RGATCY	1 cut(s)	445
BstXI	CCANNNNNNTGG	1 cut(s)	27
BstYI	RGATCY	1 cut(s)	445
Bsu36I	CCTNAGG	1 cut(s)	71
BsuRI	GGCC	2 cut(s)	391, 459
BtgI	CCRYGG	1 cut(s)	26
BtsCI	GGATG	1 cut(s)	545
BtsIMutI	CAGTG	1 cut(s)	549
Cac8I	GCNNGC	1 cut(s)	96
CfoI	GCGC	1 cut(s)	25
Cfr13I	GGNCC	3 cut(s)	389, 390, 458
Csp6I	GTAC	2 cut(s)	132, 247
CviAII	CATG	1 cut(s)	27
CviJI	RGCY	8 cut(s)	37, 94, 214, 353, 391, 397, 459, 535
CviKI_1	RGCY	8 cut(s)	37, 94, 214, 353, 391, 397, 459, 535
CviQI	GTAC	2 cut(s)	132, 247
DdeI	CTNAG	3 cut(s)	71, 234, 413
DpnI	GATC	3 cut(s)	278, 307, 447
DpnII	GATC	3 cut(s)	276, 305, 445
Eam1104I	CTCTTC	3 cut(s)	85, 515, 561
EarI	CTCTTC	3 cut(s)	85, 515, 561
Eco130I	CCWWGG	2 cut(s)	26, 429
Eco24I	GRGCYC	1 cut(s)	393
Eco31I	GGTCTC	1 cut(s)	112
Eco57I	CTGAAG	3 cut(s)	314, 539, 567
Eco81I	CCTNAGG	1 cut(s)	71
EcoNI	CCTNNNNNAGG	1 cut(s)	453
EcoO109I	RGGNCCY	2 cut(s)	389, 390
EcoRII	CCWGG	1 cut(s)	397
EcoT14I	CCWWGG	2 cut(s)	26, 429
EcoT38I	GRGCYC	1 cut(s)	393
ErhI	CCWWGG	2 cut(s)	26, 429
FaeI	CATG	1 cut(s)	30
FaiI	YATR	3 cut(s)	28, 241, 323
FaqI	GGGAC	1 cut(s)	543
FatI	CATG	1 cut(s)	26
FauI	CCCGC	1 cut(s)	501
Fnu4HI	GCNGC	1 cut(s)	35
FokI	GGATG	1 cut(s)	532
FriOI	GRGCYC	1 cut(s)	393
Fsp4HI	GCNGC	1 cut(s)	35
FspBI	CTAG	1 cut(s)	488
GlaI	GCGC	1 cut(s)	24
GluI	GCNGC	1 cut(s)	35
GsaI	CCCAGC	1 cut(s)	397
HaeII	RGCGCY	1 cut(s)	26
HaeIII	GGCC	2 cut(s)	391, 459
HapII	CCGG	1 cut(s)	461
HhaI	GCGC	1 cut(s)	25
Hin1II	CATG	1 cut(s)	30
Hin6I	GCGC	1 cut(s)	23
HinP1I	GCGC	1 cut(s)	23
HincII	GTYRAC	1 cut(s)	595
HindII	GTYRAC	1 cut(s)	595
HinfI	GANTC	3 cut(s)	56, 172, 257
HpaII	CCGG	1 cut(s)	461
Hpy166II	GTNNAC	1 cut(s)	595
Hpy188I	TCNGA	2 cut(s)	276, 586
Hpy188III	TCNNGA	4 cut(s)	155, 314, 372, 488
Hpy8I	GTNNAC	1 cut(s)	595
HpyAV	CCTTC	3 cut(s)	50, 132, 459
HpyCH4III	ACNGT	2 cut(s)	136, 289
HpyCH4IV	ACGT	1 cut(s)	539
HpyCH4V	TGCA	4 cut(s)	98, 379, 470, 545
HpyF10VI	GCNNNNNNNGC	3 cut(s)	14, 31, 104
HpyF3I	CTNAG	3 cut(s)	71, 234, 413
HpySE526I	ACGT	1 cut(s)	539
Hsp92II	CATG	1 cut(s)	30
HspAI	GCGC	1 cut(s)	23
Kzo9I	GATC	3 cut(s)	276, 305, 445
LmnI	GCTCC	4 cut(s)	5, 42, 211, 265
Lsp1109I	GCAGC	1 cut(s)	46
LweI	GCATC	1 cut(s)	554
MaeI	CTAG	1 cut(s)	488
MaeII	ACGT	1 cut(s)	539
MaeIII	GTNAC	2 cut(s)	10, 524
MalI	GATC	3 cut(s)	278, 307, 447
MboI	GATC	3 cut(s)	276, 305, 445
MboII	GAAGA	5 cut(s)	72, 395, 431, 532, 578
MflI	RGATCY	1 cut(s)	445
MhlI	GDGCHC	1 cut(s)	393
MluCI	AATT	1 cut(s)	269
MlyI	GAGTC	1 cut(s)	251
MnlI	CCTC	4 cut(s)	80, 151, 202, 525
MseI	TTAA	2 cut(s)	216, 366
MspCI	CTTAAG	1 cut(s)	215
MspI	CCGG	1 cut(s)	461
MspR9I	CCNGG	2 cut(s)	399, 461
MvaI	CCWGG	1 cut(s)	399
MwoI	GCNNNNNNNGC	3 cut(s)	14, 31, 104
NciI	CCSGG	1 cut(s)	461
NcoI	CCATGG	1 cut(s)	26
NdeII	GATC	3 cut(s)	276, 305, 445
NlaIII	CATG	1 cut(s)	30
NlaIV	GGNNCC	3 cut(s)	390, 391, 392
PfeI	GAWTC	2 cut(s)	56, 172
PkrI	GCNGC	1 cut(s)	36
PleI	GAGTC	1 cut(s)	251
PpsI	GAGTC	1 cut(s)	251
Psp1406I	AACGTT	1 cut(s)	539
Psp6I	CCWGG	1 cut(s)	397
PspFI	CCCAGC	1 cut(s)	393
PspGI	CCWGG	1 cut(s)	397
PspN4I	GGNNCC	3 cut(s)	390, 391, 392
PspOMI	GGGCCC	1 cut(s)	389
PspPI	GGNCC	3 cut(s)	389, 390, 458
PstI	CTGCAG	1 cut(s)	381
PsuI	RGATCY	1 cut(s)	445
RsaI	GTAC	2 cut(s)	133, 248
RsaNI	GTAC	2 cut(s)	132, 247
SaqAI	TTAA	2 cut(s)	216, 366
SatI	GCNGC	1 cut(s)	35
Sau3AI	GATC	3 cut(s)	276, 305, 445
Sau96I	GGNCC	3 cut(s)	389, 390, 458
SchI	GAGTC	1 cut(s)	251
ScrFI	CCNGG	2 cut(s)	399, 461
SduI	GDGCHC	1 cut(s)	393
SetI	ASST	9 cut(s)	39, 72, 96, 124, 216, 403, 504, 519, 542
SfaNI	GCATC	1 cut(s)	554
SfcI	CTRYAG	2 cut(s)	377, 453
SmlI	CTYRAG	1 cut(s)	215
SmoI	CTYRAG	1 cut(s)	215
Sse9I	AATT	1 cut(s)	269
SsiI	CCGC	1 cut(s)	494
SspMI	CTAG	1 cut(s)	488
StyD4I	CCNGG	2 cut(s)	397, 459
StyI	CCWWGG	2 cut(s)	26, 429
TaaI	ACNGT	2 cut(s)	136, 289
TaiI	ACGT	1 cut(s)	542
TasI	AATT	1 cut(s)	269
TfiI	GAWTC	2 cut(s)	56, 172
Tru1I	TTAA	2 cut(s)	216, 366
Tru9I	TTAA	2 cut(s)	216, 366
TscAI	CASTG	1 cut(s)	556
TseI	GCWGC	1 cut(s)	34
TspDTI	ATGAA	1 cut(s)	579
TspGWI	ACGGA	1 cut(s)	430
TspRI	CASTG	1 cut(s)	556
Vha464I	CTTAAG	1 cut(s)	215
XagI	CCTNNNNNAGG	1 cut(s)	453
XbaI	TCTAGA	1 cut(s)	487
XspI	CTAG	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.