Prupe.2G218700_v2.0.a1

Proteolipid membrane potential modulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0018717
Physical Location & Seq
Forward (+)
24798366 .. 24799182
817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G218700.1

Sequence Viewer

Length: 420 bp
ATGCACGGAACTAACCAAACAGCAAGGCCTAAATCTGACACGTGTCAATCCGCACCCCACGTGGCATTACCAGAATTTGCAGTATGCCACCTATATGTAACTGATAAGGGTTCTTCCTTCTCTTATATATCCTCCACTTCTCTTTCACTGAAAGTAAATCTAATTCTCTCGGTCCACATTATCCTTAGCACAAGCATAAGATCCTCAACCAAATTTAGCACAACTGGTCTCATCATCTTCATCATCTTCATCATCATGGGTTCAGAAACGTTTCTAGAAGTGATATTGGCAATTATCCTGCCACCTGTTGGGGTCTTCCTCCGCTATGGCTGTGGAGTGGAGTTCTGGATTTGTTTGTTGCTGACACTGTTGGGATATATTCCGGGAATTATATATGCATTATATGTACTGGTCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pmp3

Protein Analysis

140

Amino Acids

15.16

Weight (kDa)

7.7

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018717)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38905
malus_domestica MD01G1131300.v1.1 MD07G1179400.v1.1
prunus_persica Prupe.2G218700_v2.0.a1
pyrus_communis pycom01g14010
rosa_chinensis RchiOBHm_Chr1g0364141
rosa_roxburghii Rroxscaffold_4G00292600
rosa_rugosa Rorug01G0313900
rosa_wichuraiana Rw1G028500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 308
AciI CCGC 2 cut(s) 51, 322
AclI AACGTT 1 cut(s) 269
AclWI GGATC 1 cut(s) 195
AcsI RAATTY 2 cut(s) 74, 212
AcvI CACGTG 2 cut(s) 42, 61
AfaI GTAC 1 cut(s) 408
AfiI CCNNNNNNNGG 1 cut(s) 308
AflIII ACRYGT 2 cut(s) 39, 41
Alw26I GTCTC 1 cut(s) 233
AlwI GGATC 1 cut(s) 195
AoxI GGCC 1 cut(s) 26
ApoI RAATTY 2 cut(s) 74, 212
Asp700I GAANNNNTTC 1 cut(s) 270
AspS9I GGNCC 1 cut(s) 172
AsuC2I CCSGG 1 cut(s) 384
AvaII GGWCC 1 cut(s) 172
BbrPI CACGTG 2 cut(s) 42, 61
BbsI GAAGAC 1 cut(s) 307
BcnI CCSGG 1 cut(s) 384
BcoDI GTCTC 1 cut(s) 233
BfaI CTAG 1 cut(s) 275
Bme1390I CCNGG 1 cut(s) 384
Bme18I GGWCC 1 cut(s) 172
BmgT120I GGNCC 1 cut(s) 172
BmrFI CCNGG 1 cut(s) 384
BoxI GACNNNNGTC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 307
Bpu10I CCTNAGC 1 cut(s) 185
BpuMI CCSGG 1 cut(s) 384
BsaAI YACGTR 2 cut(s) 42, 61
BsaI GGTCTC 1 cut(s) 233
Bsc4I CCNNNNNNNGG 1 cut(s) 308
Bse1I ACTGG 2 cut(s) 229, 414
BseLI CCNNNNNNNGG 1 cut(s) 308
BseNI ACTGG 2 cut(s) 229, 414
BshFI GGCC 1 cut(s) 28
BsiSI CCGG 1 cut(s) 383
BslI CCNNNNNNNGG 1 cut(s) 308
BsmAI GTCTC 1 cut(s) 233
BsnI GGCC 1 cut(s) 28
Bso31I GGTCTC 1 cut(s) 233
Bsp143I GATC 1 cut(s) 200
BspACI CCGC 2 cut(s) 51, 322
BspANI GGCC 1 cut(s) 28
BspPI GGATC 1 cut(s) 195
BspTNI GGTCTC 1 cut(s) 233
BsrI ACTGG 2 cut(s) 229, 414
BssMI GATC 1 cut(s) 200
Bst4CI ACNGT 1 cut(s) 369
BstBAI YACGTR 2 cut(s) 42, 61
BstDEI CTNAG 1 cut(s) 185
BstKTI GATC 1 cut(s) 203
BstMAI GTCTC 1 cut(s) 233
BstMBI GATC 1 cut(s) 200
BstPAI GACNNNNGTC 1 cut(s) 42
BstSCI CCNGG 1 cut(s) 382
BstV2I GAAGAC 1 cut(s) 307
BstX2I RGATCY 1 cut(s) 200
BstYI RGATCY 1 cut(s) 200
BsuRI GGCC 1 cut(s) 28
BtsIMutI CAGTG 2 cut(s) 146, 365
Cfr13I GGNCC 1 cut(s) 172
Csp6I GTAC 1 cut(s) 407
CviAII CATG 1 cut(s) 256
CviJI RGCY 2 cut(s) 28, 330
CviKI_1 RGCY 2 cut(s) 28, 330
CviQI GTAC 1 cut(s) 407
DdeI CTNAG 1 cut(s) 185
DpnI GATC 1 cut(s) 202
DpnII GATC 1 cut(s) 200
Eco147I AGGCCT 1 cut(s) 28
Eco31I GGTCTC 1 cut(s) 233
Eco47I GGWCC 1 cut(s) 172
Eco72I CACGTG 2 cut(s) 42, 61
EcoT22I ATGCAT 1 cut(s) 400
FaeI CATG 1 cut(s) 259
FatI CATG 1 cut(s) 255
FspBI CTAG 1 cut(s) 275
HaeIII GGCC 1 cut(s) 28
HapII CCGG 1 cut(s) 383
Hin1II CATG 1 cut(s) 259
HpaII CCGG 1 cut(s) 383
Hpy166II GTNNAC 1 cut(s) 175
Hpy188I TCNGA 3 cut(s) 37, 265, 416
Hpy188III TCNNGA 2 cut(s) 275, 346
Hpy8I GTNNAC 1 cut(s) 175
HpyAV CCTTC 1 cut(s) 127
HpyCH4III ACNGT 1 cut(s) 369
HpyCH4IV ACGT 3 cut(s) 41, 60, 269
HpyCH4V TGCA 3 cut(s) 4, 80, 398
HpyF3I CTNAG 1 cut(s) 185
HpySE526I ACGT 3 cut(s) 41, 60, 269
Hsp92II CATG 1 cut(s) 259
Kzo9I GATC 1 cut(s) 200
LpnPI CCDG 7 cut(s) 84, 210, 311, 318, 331, 395, 396
MaeI CTAG 1 cut(s) 275
MaeII ACGT 3 cut(s) 41, 60, 269
MaeIII GTNAC 1 cut(s) 97
MalI GATC 1 cut(s) 202
MboI GATC 1 cut(s) 200
MboII GAAGA 4 cut(s) 105, 229, 238, 307
MflI RGATCY 1 cut(s) 200
MluCI AATT 5 cut(s) 74, 162, 212, 291, 387
MmeI TCCRAC 1 cut(s) 394
MnlI CCTC 3 cut(s) 142, 214, 329
Mph1103I ATGCAT 1 cut(s) 400
MroXI GAANNNNTTC 1 cut(s) 270
MslI CAYNNNNRTG 2 cut(s) 93, 254
MspI CCGG 1 cut(s) 383
MspR9I CCNGG 1 cut(s) 384
NciI CCSGG 1 cut(s) 384
NdeII GATC 1 cut(s) 200
NlaIII CATG 1 cut(s) 259
NsiI ATGCAT 1 cut(s) 400
PceI AGGCCT 1 cut(s) 28
PdmI GAANNNNTTC 1 cut(s) 270
PflMI CCANNNNNTGG 1 cut(s) 308
PfoI TCCNGGA 1 cut(s) 382
PmaCI CACGTG 2 cut(s) 42, 61
PmlI CACGTG 2 cut(s) 42, 61
Ppu21I YACGTR 2 cut(s) 42, 61
PshAI GACNNNNGTC 1 cut(s) 42
Psp1406I AACGTT 1 cut(s) 269
PspCI CACGTG 2 cut(s) 42, 61
PspPI GGNCC 1 cut(s) 172
PsuI RGATCY 1 cut(s) 200
RsaI GTAC 1 cut(s) 408
RsaNI GTAC 1 cut(s) 407
RseI CAYNNNNRTG 2 cut(s) 93, 254
Sau3AI GATC 1 cut(s) 200
Sau96I GGNCC 1 cut(s) 172
ScrFI CCNGG 1 cut(s) 384
SetI ASST 5 cut(s) 44, 63, 93, 272, 307
SinI GGWCC 1 cut(s) 172
SmiMI CAYNNNNRTG 2 cut(s) 93, 254
Sse9I AATT 5 cut(s) 74, 162, 212, 291, 387
SseBI AGGCCT 1 cut(s) 28
SsiI CCGC 2 cut(s) 51, 322
SspMI CTAG 1 cut(s) 275
StuI AGGCCT 1 cut(s) 28
StyD4I CCNGG 1 cut(s) 382
TaaI ACNGT 1 cut(s) 369
TaiI ACGT 3 cut(s) 44, 63, 272
TaqII GACCGA 1 cut(s) 160
TasI AATT 5 cut(s) 74, 162, 212, 291, 387
TatI WGTACW 1 cut(s) 406
TscAI CASTG 2 cut(s) 153, 372
TspDTI ATGAA 2 cut(s) 229, 238
TspGWI ACGGA 1 cut(s) 21
TspRI CASTG 2 cut(s) 153, 372
Van91I CCANNNNNTGG 1 cut(s) 308
VpaK11BI GGWCC 1 cut(s) 172
XapI RAATTY 2 cut(s) 74, 212
XbaI TCTAGA 1 cut(s) 274
XmnI GAANNNNTTC 1 cut(s) 270
XspI CTAG 1 cut(s) 275
Zsp2I ATGCAT 1 cut(s) 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.