Prupe.2G228500_v2.0.a1

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
25416844 .. 25417155
312 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G228500.1

Sequence Viewer

Length: 312 bp
ATGGCTACCACCAGCAGCGCTAGCGTGAGTTTGAAGCTTCTGATTGACACAAAAAGCCACAAAGTTCTGTTTGCTGAAGCAAGCAAGGAAGTTGTTGATTTCCTTTTCAGTTTTCTGTCTTTGCATGTTGCAACTGTTACTAGGCTCCTCTCAACTGATGGTATTGTTGGTTACTTAGGCAACCTTTACCAGAGTGCCGAAAGCCTTAGTGTCAGCTCATACTTGCCACTCAATCTGCGGCCAATATCCTTCAATTGCCATTGCCGACCAACAATGACTAGAATCTTTCTAAATTGTTCTACATTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.32

Weight (kDa)

8.55

Isoelectric Point (pI)

23.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 238
AcoI YGGCCR 1 cut(s) 239
AcuI CTGAAG 1 cut(s) 96
AfeI AGCGCT 1 cut(s) 19
AgsI TTSAA 2 cut(s) 34, 253
AluBI AGCT 2 cut(s) 37, 216
AluI AGCT 2 cut(s) 37, 216
Aor51HI AGCGCT 1 cut(s) 19
AoxI GGCC 1 cut(s) 239
ApeKI GCWGC 1 cut(s) 15
AspLEI GCGC 1 cut(s) 20
AsuNHI GCTAGC 1 cut(s) 20
BbvI GCAGC 1 cut(s) 27
BccI CCATC 1 cut(s) 152
BfaI CTAG 3 cut(s) 21, 141, 279
BfoI RGCGCY 1 cut(s) 21
BisI GCNGC 2 cut(s) 16, 239
BlsI GCNGC 2 cut(s) 17, 240
BmiI GGNNCC 1 cut(s) 146
BmtI GCTAGC 1 cut(s) 24
Bse3DI GCAATG 1 cut(s) 259
BseMI GCAATG 1 cut(s) 259
BseRI GAGGAG 1 cut(s) 137
BseXI GCAGC 1 cut(s) 27
BshFI GGCC 1 cut(s) 241
BsnI GGCC 1 cut(s) 241
BspACI CCGC 1 cut(s) 238
BspANI GGCC 1 cut(s) 241
BspLI GGNNCC 1 cut(s) 146
BspOI GCTAGC 1 cut(s) 24
BsrDI GCAATG 1 cut(s) 259
Bst4CI ACNGT 1 cut(s) 136
BstC8I GCNNGC 2 cut(s) 22, 82
BstDEI CTNAG 2 cut(s) 175, 206
BstH2I RGCGCY 1 cut(s) 21
BstHHI GCGC 1 cut(s) 20
BstMWI GCNNNNNNNGC 1 cut(s) 21
BstNSI RCATGY 1 cut(s) 128
BstV1I GCAGC 1 cut(s) 27
BsuRI GGCC 1 cut(s) 241
Cac8I GCNNGC 2 cut(s) 22, 82
CfoI GCGC 1 cut(s) 20
CviAII CATG 1 cut(s) 125
CviJI RGCY 7 cut(s) 5, 37, 57, 145, 204, 216, 241
CviKI_1 RGCY 7 cut(s) 5, 37, 57, 145, 204, 216, 241
DdeI CTNAG 2 cut(s) 175, 206
EaeI YGGCCR 1 cut(s) 239
Eco47III AGCGCT 1 cut(s) 19
Eco57I CTGAAG 1 cut(s) 96
FaeI CATG 1 cut(s) 128
FaiI YATR 2 cut(s) 126, 220
FatI CATG 1 cut(s) 124
Fnu4HI GCNGC 2 cut(s) 16, 239
Fsp4HI GCNGC 2 cut(s) 16, 239
FspBI CTAG 3 cut(s) 21, 141, 279
GlaI GCGC 1 cut(s) 19
GluI GCNGC 2 cut(s) 16, 239
HaeII RGCGCY 1 cut(s) 21
HaeIII GGCC 1 cut(s) 241
HhaI GCGC 1 cut(s) 20
Hin1II CATG 1 cut(s) 128
Hin6I GCGC 1 cut(s) 18
HinP1I GCGC 1 cut(s) 18
HindIII AAGCTT 1 cut(s) 35
HinfI GANTC 1 cut(s) 282
Hpy188I TCNGA 1 cut(s) 42
HpyAV CCTTC 1 cut(s) 259
HpyCH4III ACNGT 1 cut(s) 136
HpyCH4V TGCA 2 cut(s) 124, 131
HpyF10VI GCNNNNNNNGC 1 cut(s) 21
HpyF3I CTNAG 2 cut(s) 175, 206
Hsp92II CATG 1 cut(s) 128
HspAI GCGC 1 cut(s) 18
LmnI GCTCC 1 cut(s) 150
LpnPI CCDG 2 cut(s) 25, 203
Lsp1109I GCAGC 1 cut(s) 27
MaeI CTAG 3 cut(s) 21, 141, 279
MaeIII GTNAC 2 cut(s) 136, 170
MfeI CAATTG 1 cut(s) 253
MluCI AATT 2 cut(s) 253, 292
MnlI CCTC 1 cut(s) 158
MslI CAYNNNNRTG 1 cut(s) 307
MunI CAATTG 1 cut(s) 253
MwoI GCNNNNNNNGC 1 cut(s) 21
NheI GCTAGC 1 cut(s) 20
NlaIII CATG 1 cut(s) 128
NlaIV GGNNCC 1 cut(s) 146
NspI RCATGY 1 cut(s) 128
PfeI GAWTC 1 cut(s) 282
PkrI GCNGC 2 cut(s) 17, 240
PspN4I GGNNCC 1 cut(s) 146
RseI CAYNNNNRTG 1 cut(s) 307
SatI GCNGC 2 cut(s) 16, 239
SetI ASST 3 cut(s) 39, 186, 218
SmiMI CAYNNNNRTG 1 cut(s) 307
Sse9I AATT 2 cut(s) 253, 292
SsiI CCGC 1 cut(s) 238
SspMI CTAG 3 cut(s) 21, 141, 279
TaaI ACNGT 1 cut(s) 136
TasI AATT 2 cut(s) 253, 292
TauI GCSGC 1 cut(s) 241
TfiI GAWTC 1 cut(s) 282
TseI GCWGC 1 cut(s) 15
XceI RCATGY 1 cut(s) 128
XspI CTAG 3 cut(s) 21, 141, 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.