Prupe.2G279200_v2.0.a1

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0019294
Physical Location & Seq
Reverse (-)
27922196 .. 27923039
844 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G279200.1

Sequence Viewer

Length: 717 bp
ATGGTTGGTTGCTTAGGCAACCTTTACCAGAGTGCCGAAAGTCTTAGTGTCAATTCATACTTGCCACTCAATCTTAAGGACACCCTGCTCAAACCCAAAACAACAATTTCTGCGGCCAACATCCTTCAATTGCCATTGCCGACCAACAATGATTCGAATCTTTCTAAATTGTTCTACATTTGTGTGAGGTGCAGTAACCGTATTTCTGAGAGCTATGAAATTCCTTGTCCACAGTGCAGATCATGTAACATTTCCACCCCGGTGTCTTATGTTTCGCCATCTGCTCCTACTGGAGCAACCTCCAGCAATATTAAGGCAGGCTATGTCAAGGGTGGTGTCATTTACATGATAATGGATAATTTGGAAGTGAAGCCAATGACCACCGAATCAAGTGTTGCAGTGCTTCAAAAGTTCAATGTGAAAGGGATTGATGCTCTTCAAGGTTTGAGGTTGGTGAAGGCATCGTTGGAGTCAAATACCGCTCTTACTAATGTCTTCCTTGGAAAGAAACCGCACAAACTTTTCAACTTTGGTCCTCTAGCGACATTGAGCTTTTGGGGTTTCATTTTGGTTTGTGGATTGGGATTTCTATTCTATTACTTTGGATCATGTAAACTTTGGTCCATTGATTCAATTGGTTTCATTCATTATATCTCAAGAAAACTCATCTGCCATCGCAACAATCATTCAGCTTTATCGTTGATCCAGAACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

239

Amino Acids

26.15

Weight (kDa)

9.27

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 482
AciI CCGC 3 cut(s) 113, 480, 512
AclWI GGATC 2 cut(s) 613, 697
AcoI YGGCCR 1 cut(s) 114
AcsI RAATTY 1 cut(s) 219
AflII CTTAAG 1 cut(s) 74
AgsI TTSAA 6 cut(s) 128, 407, 415, 440, 526, 633
AjuI GAANNNNNNNTTGG 2 cut(s) 449, 481
AleI CACNNNNGTG 1 cut(s) 260
AluBI AGCT 3 cut(s) 213, 552, 692
AluI AGCT 3 cut(s) 213, 552, 692
AlwI GGATC 2 cut(s) 613, 697
AoxI GGCC 1 cut(s) 114
ApoI RAATTY 1 cut(s) 219
AspS9I GGNCC 2 cut(s) 533, 621
AsuC2I CCSGG 1 cut(s) 260
AsuHPI GGTGA 1 cut(s) 466
AsuII TTCGAA 1 cut(s) 155
AvaII GGWCC 2 cut(s) 533, 621
BbsI GAAGAC 1 cut(s) 487
BccI CCATC 2 cut(s) 286, 681
BcnI CCSGG 1 cut(s) 260
BfaI CTAG 1 cut(s) 539
BfrI CTTAAG 1 cut(s) 74
BisI GCNGC 1 cut(s) 114
BlsI GCNGC 1 cut(s) 115
Bme1390I CCNGG 1 cut(s) 260
Bme18I GGWCC 2 cut(s) 533, 621
BmgT120I GGNCC 2 cut(s) 533, 621
BmrFI CCNGG 1 cut(s) 260
BmsI GCATC 2 cut(s) 421, 470
BpiI GAAGAC 1 cut(s) 487
BpmI CTGGAG 2 cut(s) 286, 312
Bpu10I CCTNAGC 1 cut(s) 13
Bpu14I TTCGAA 1 cut(s) 155
BpuEI CTTGAG 1 cut(s) 640
BpuMI CCSGG 1 cut(s) 260
BsaBI GATNNNNATC 1 cut(s) 156
BsaJI CCNNGG 2 cut(s) 258, 499
Bse1I ACTGG 1 cut(s) 295
Bse3DI GCAATG 1 cut(s) 134
Bse8I GATNNNNATC 1 cut(s) 156
BseDI CCNNGG 2 cut(s) 258, 499
BseGI GGATG 1 cut(s) 120
BseJI GATNNNNATC 1 cut(s) 156
BseMI GCAATG 1 cut(s) 134
BseMII CTCAG 1 cut(s) 198
BseNI ACTGG 1 cut(s) 295
BsgI GTGCAG 2 cut(s) 211, 256
BshFI GGCC 1 cut(s) 116
BsiSI CCGG 1 cut(s) 260
BsnI GGCC 1 cut(s) 116
Bsp119I TTCGAA 1 cut(s) 155
Bsp143I GATC 3 cut(s) 239, 605, 702
BspACI CCGC 3 cut(s) 113, 480, 512
BspANI GGCC 1 cut(s) 116
BspCNI CTCAG 1 cut(s) 199
BspPI GGATC 2 cut(s) 613, 697
BspQI GCTCTTC 1 cut(s) 441
BspT104I TTCGAA 1 cut(s) 155
BspTI CTTAAG 1 cut(s) 74
BsrBI CCGCTC 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 134
BsrI ACTGG 1 cut(s) 295
BssECI CCNNGG 2 cut(s) 258, 499
BssMI GATC 3 cut(s) 239, 605, 702
BssT1I CCWWGG 1 cut(s) 499
Bst4CI ACNGT 2 cut(s) 200, 234
Bst6I CTCTTC 1 cut(s) 441
BstAFI CTTAAG 1 cut(s) 74
BstBI TTCGAA 1 cut(s) 155
BstC8I GCNNGC 1 cut(s) 319
BstDEI CTNAG 3 cut(s) 13, 44, 207
BstF5I GGATG 1 cut(s) 120
BstKTI GATC 3 cut(s) 242, 608, 705
BstMBI GATC 3 cut(s) 239, 605, 702
BstSCI CCNGG 1 cut(s) 258
BstV2I GAAGAC 1 cut(s) 487
BsuRI GGCC 1 cut(s) 116
BtgZI GCGATG 1 cut(s) 659
BtsCI GGATG 1 cut(s) 120
BtsI GCAGTG 1 cut(s) 405
BtsIMutI CAGTG 2 cut(s) 239, 405
Cac8I GCNNGC 1 cut(s) 319
Cfr13I GGNCC 2 cut(s) 533, 621
CviAII CATG 3 cut(s) 243, 346, 609
CviJI RGCY 6 cut(s) 116, 213, 321, 373, 552, 692
CviKI_1 RGCY 6 cut(s) 116, 213, 321, 373, 552, 692
DdeI CTNAG 3 cut(s) 13, 44, 207
DpnI GATC 3 cut(s) 241, 607, 704
DpnII GATC 3 cut(s) 239, 605, 702
EaeI YGGCCR 1 cut(s) 114
Eam1104I CTCTTC 1 cut(s) 441
EarI CTCTTC 1 cut(s) 441
Eco130I CCWWGG 1 cut(s) 499
Eco47I GGWCC 2 cut(s) 533, 621
EcoT14I CCWWGG 1 cut(s) 499
ErhI CCWWGG 1 cut(s) 499
FaeI CATG 3 cut(s) 246, 349, 612
FaiI YATR 8 cut(s) 58, 216, 244, 270, 324, 347, 610, 651
FatI CATG 3 cut(s) 242, 345, 608
Fnu4HI GCNGC 1 cut(s) 114
FokI GGATG 1 cut(s) 107
Fsp4HI GCNGC 1 cut(s) 114
FspBI CTAG 1 cut(s) 539
GluI GCNGC 1 cut(s) 114
GsuI CTGGAG 2 cut(s) 286, 312
HaeIII GGCC 1 cut(s) 116
HapII CCGG 1 cut(s) 260
Hin1II CATG 3 cut(s) 246, 349, 612
HinfI GANTC 5 cut(s) 152, 157, 386, 470, 629
HpaII CCGG 1 cut(s) 260
HphI GGTGA 1 cut(s) 466
Hpy166II GTNNAC 2 cut(s) 230, 614
Hpy188I TCNGA 1 cut(s) 208
Hpy188III TCNNGA 2 cut(s) 657, 706
Hpy8I GTNNAC 2 cut(s) 230, 614
HpyAV CCTTC 2 cut(s) 134, 451
HpyCH4III ACNGT 2 cut(s) 200, 234
HpyCH4V TGCA 3 cut(s) 192, 237, 398
HpyF3I CTNAG 3 cut(s) 13, 44, 207
Hsp92II CATG 3 cut(s) 246, 349, 612
Kzo9I GATC 3 cut(s) 239, 605, 702
LguI GCTCTTC 1 cut(s) 441
LmnI GCTCC 2 cut(s) 289, 293
LpnPI CCDG 6 cut(s) 41, 98, 273, 276, 303, 316
LweI GCATC 2 cut(s) 421, 470
MaeI CTAG 1 cut(s) 539
MaeIII GTNAC 2 cut(s) 194, 245
MalI GATC 3 cut(s) 241, 607, 704
MbiI CCGCTC 1 cut(s) 482
MboI GATC 3 cut(s) 239, 605, 702
MboII GAAGA 2 cut(s) 428, 487
MfeI CAATTG 2 cut(s) 128, 633
MluCI AATT 7 cut(s) 52, 105, 128, 167, 219, 358, 633
MlyI GAGTC 1 cut(s) 479
MmeI TCCRAC 1 cut(s) 447
MnlI CCTC 4 cut(s) 180, 310, 441, 546
MseI TTAA 2 cut(s) 75, 312
MslI CAYNNNNRTG 4 cut(s) 182, 260, 344, 350
MspCI CTTAAG 1 cut(s) 74
MspI CCGG 1 cut(s) 260
MspR9I CCNGG 1 cut(s) 260
MunI CAATTG 2 cut(s) 128, 633
NciI CCSGG 1 cut(s) 260
NdeII GATC 3 cut(s) 239, 605, 702
NlaIII CATG 3 cut(s) 246, 349, 612
NspV TTCGAA 1 cut(s) 155
OliI CACNNNNGTG 1 cut(s) 260
PciSI GCTCTTC 1 cut(s) 441
PfeI GAWTC 4 cut(s) 152, 157, 386, 629
PkrI GCNGC 1 cut(s) 115
PleI GAGTC 1 cut(s) 478
PpsI GAGTC 1 cut(s) 478
PspPI GGNCC 2 cut(s) 533, 621
RseI CAYNNNNRTG 4 cut(s) 182, 260, 344, 350
SapI GCTCTTC 1 cut(s) 441
SaqAI TTAA 2 cut(s) 75, 312
SatI GCNGC 1 cut(s) 114
Sau3AI GATC 3 cut(s) 239, 605, 702
Sau96I GGNCC 2 cut(s) 533, 621
SchI GAGTC 1 cut(s) 479
ScrFI CCNGG 1 cut(s) 260
SetI ASST 8 cut(s) 24, 191, 215, 302, 445, 452, 554, 694
SfaNI GCATC 2 cut(s) 421, 470
SfuI TTCGAA 1 cut(s) 155
SinI GGWCC 2 cut(s) 533, 621
SmiMI CAYNNNNRTG 4 cut(s) 182, 260, 344, 350
SmlI CTYRAG 2 cut(s) 74, 655
SmoI CTYRAG 2 cut(s) 74, 655
Sse9I AATT 7 cut(s) 52, 105, 128, 167, 219, 358, 633
SsiI CCGC 3 cut(s) 113, 480, 512
SspI AATATT 1 cut(s) 310
SspMI CTAG 1 cut(s) 539
StyD4I CCNGG 1 cut(s) 258
StyI CCWWGG 1 cut(s) 499
TaaI ACNGT 2 cut(s) 200, 234
TaqI TCGA 1 cut(s) 155
TasI AATT 7 cut(s) 52, 105, 128, 167, 219, 358, 633
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 4 cut(s) 152, 157, 386, 629
Tru1I TTAA 2 cut(s) 75, 312
Tru9I TTAA 2 cut(s) 75, 312
TscAI CASTG 2 cut(s) 239, 405
TspDTI ATGAA 5 cut(s) 45, 231, 553, 631, 635
TspRI CASTG 2 cut(s) 239, 405
Vha464I CTTAAG 1 cut(s) 74
VpaK11BI GGWCC 2 cut(s) 533, 621
XapI RAATTY 1 cut(s) 219
XspI CTAG 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.