Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0019294

Physical Location & Seq

Genomic Coordinates Reverse (-)

26871953 .. 26872795

Gene Structure 843 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G291300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 678 bp

ATGGCTACCACCAACAGCGCTAGCGTGAGTTTGAAGCTTCTGATTGACCCAAAAAGCCACAAAGTTCTGTTTGCTGAAGCAAGCAAGGAAGTTGTTGATTTCCTTTTCAGTTTTCTGTCTTTGCATGTTGCAACTGTTACTAGGCTCCTCTCAACTGATGGCAACCTTTACCAGAGTGCCGAAAGCCTTAGTGTCAACTCCTACTTGCCACTCAATCTTAAGGACACCCTGCTCAAACCCAAAACAACAATTTCTGCGAATCTTTCTAAATTGTTCTACATTTGTGTGAGGTGCAGTAACCGTATTCCTGAGAGCTATGGAATCCCTTGTCCACAGTGCAGATCATGTAACATTTCCACCCCGGTGTCTTATGTTTCTCCATCTGCTCCTACTGGAGCAACCTCCAGCAATATTAAGGCAGGCTATGTCAAGGGTGGTGTTATTTACATGATAGTGGATAATTTGGAAGTGAAGCCAATGACCACCGAATCAAGTGTTGCAGTACTTCAAAAGTTCAATGTGAAGGGGATTGATGCACTTCAAGGTTTGAAGTTGGTGAAGGCATCATCGGAGTCAAATACCGCTCTTACCAATGTCTTCCTTGGAAAGAAACAGCACAAACTTTTCAACTTTGGTCCTCTAGCGACATTGAGCTTTTGGGGTTTCATTTTACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF674

Protein Analysis

226

Amino Acids

24.36

Weight (kDa)

9.35

Isoelectric Point (pI)

29.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019294)

Species	Orthologous Gene IDs
prunus_persica	Prupe.2G228200_v2.0.a1 Prupe.2G228500_v2.0.a1 Prupe.2G279000_v2.0.a1 Prupe.2G279000_v2.0.a1 Prupe.2G279200_v2.0.a1 Prupe.2G279300_v2.0.a1 Prupe.6G261800_v2.0.a1 Prupe.6G291300_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	584
AciI	CCGC	1 cut(s)	582
AcuI	CTGAAG	1 cut(s)	96
AfaI	GTAC	1 cut(s)	504
AfeI	AGCGCT	1 cut(s)	19
AflII	CTTAAG	1 cut(s)	218
AgsI	TTSAA	6 cut(s)	34, 509, 517, 542, 550, 628
AleI	CACNNNNGTG	1 cut(s)	362
AluBI	AGCT	3 cut(s)	37, 315, 654
AluI	AGCT	3 cut(s)	37, 315, 654
Aor51HI	AGCGCT	1 cut(s)	19
AspLEI	GCGC	1 cut(s)	20
AspS9I	GGNCC	1 cut(s)	635
AsuC2I	CCSGG	1 cut(s)	362
AsuHPI	GGTGA	1 cut(s)	568
AsuNHI	GCTAGC	1 cut(s)	20
AvaII	GGWCC	1 cut(s)	635
BbsI	GAAGAC	1 cut(s)	589
BccI	CCATC	2 cut(s)	152, 388
BcnI	CCSGG	1 cut(s)	362
BfaI	CTAG	3 cut(s)	21, 141, 641
BfoI	RGCGCY	1 cut(s)	21
BfrI	CTTAAG	1 cut(s)	218
BmcAI	AGTACT	1 cut(s)	504
Bme1390I	CCNGG	1 cut(s)	362
Bme18I	GGWCC	1 cut(s)	635
BmgT120I	GGNCC	1 cut(s)	635
BmiI	GGNNCC	1 cut(s)	146
BmrFI	CCNGG	1 cut(s)	362
BmsI	GCATC	2 cut(s)	523, 572
BmtI	GCTAGC	1 cut(s)	24
BpiI	GAAGAC	1 cut(s)	589
BpmI	CTGGAG	2 cut(s)	388, 414
BpuMI	CCSGG	1 cut(s)	362
BsaJI	CCNNGG	2 cut(s)	360, 601
Bse1I	ACTGG	1 cut(s)	397
BseDI	CCNNGG	2 cut(s)	360, 601
BseMII	CTCAG	1 cut(s)	300
BseNI	ACTGG	1 cut(s)	397
BseRI	GAGGAG	1 cut(s)	137
BsgI	GTGCAG	2 cut(s)	313, 358
BsiSI	CCGG	1 cut(s)	362
Bsp143I	GATC	1 cut(s)	341
BspACI	CCGC	1 cut(s)	582
BspCNI	CTCAG	1 cut(s)	301
BspLI	GGNNCC	1 cut(s)	146
BspOI	GCTAGC	1 cut(s)	24
BspTI	CTTAAG	1 cut(s)	218
BsrBI	CCGCTC	1 cut(s)	584
BsrI	ACTGG	1 cut(s)	397
BssECI	CCNNGG	2 cut(s)	360, 601
BssMI	GATC	1 cut(s)	341
BssT1I	CCWWGG	1 cut(s)	601
Bst4CI	ACNGT	3 cut(s)	136, 302, 336
BstAFI	CTTAAG	1 cut(s)	218
BstC8I	GCNNGC	3 cut(s)	22, 82, 421
BstDEI	CTNAG	2 cut(s)	188, 309
BstH2I	RGCGCY	1 cut(s)	21
BstHHI	GCGC	1 cut(s)	20
BstKTI	GATC	1 cut(s)	344
BstMBI	GATC	1 cut(s)	341
BstNSI	RCATGY	1 cut(s)	128
BstSCI	CCNGG	1 cut(s)	360
BstV2I	GAAGAC	1 cut(s)	589
BtsIMutI	CAGTG	1 cut(s)	341
Cac8I	GCNNGC	3 cut(s)	22, 82, 421
CfoI	GCGC	1 cut(s)	20
Cfr13I	GGNCC	1 cut(s)	635
Csp6I	GTAC	1 cut(s)	503
CviAII	CATG	3 cut(s)	125, 345, 448
CviJI	RGCY	9 cut(s)	5, 37, 57, 145, 186, 315, 423, 475, 654
CviKI_1	RGCY	9 cut(s)	5, 37, 57, 145, 186, 315, 423, 475, 654
CviQI	GTAC	1 cut(s)	503
DdeI	CTNAG	2 cut(s)	188, 309
DpnI	GATC	1 cut(s)	343
DpnII	GATC	1 cut(s)	341
Eco130I	CCWWGG	1 cut(s)	601
Eco47I	GGWCC	1 cut(s)	635
Eco47III	AGCGCT	1 cut(s)	19
Eco57I	CTGAAG	1 cut(s)	96
EcoT14I	CCWWGG	1 cut(s)	601
ErhI	CCWWGG	1 cut(s)	601
FaeI	CATG	3 cut(s)	128, 348, 451
FaiI	YATR	6 cut(s)	126, 318, 346, 372, 426, 449
FatI	CATG	3 cut(s)	124, 344, 447
FspBI	CTAG	3 cut(s)	21, 141, 641
GlaI	GCGC	1 cut(s)	19
GsuI	CTGGAG	2 cut(s)	388, 414
HaeII	RGCGCY	1 cut(s)	21
HapII	CCGG	1 cut(s)	362
HhaI	GCGC	1 cut(s)	20
Hin1II	CATG	3 cut(s)	128, 348, 451
Hin6I	GCGC	1 cut(s)	18
HinP1I	GCGC	1 cut(s)	18
HincII	GTYRAC	1 cut(s)	196
HindII	GTYRAC	1 cut(s)	196
HindIII	AAGCTT	1 cut(s)	35
HinfI	GANTC	4 cut(s)	259, 321, 488, 572
HpaII	CCGG	1 cut(s)	362
HphI	GGTGA	1 cut(s)	568
Hpy166II	GTNNAC	2 cut(s)	196, 332
Hpy188I	TCNGA	2 cut(s)	42, 571
Hpy188III	TCNNGA	1 cut(s)	308
Hpy8I	GTNNAC	2 cut(s)	196, 332
HpyAV	CCTTC	2 cut(s)	517, 553
HpyCH4III	ACNGT	3 cut(s)	136, 302, 336
HpyCH4V	TGCA	6 cut(s)	124, 131, 294, 339, 500, 536
HpyF3I	CTNAG	2 cut(s)	188, 309
Hsp92II	CATG	3 cut(s)	128, 348, 451
HspAI	GCGC	1 cut(s)	18
Kzo9I	GATC	1 cut(s)	341
LmnI	GCTCC	3 cut(s)	150, 391, 395
LpnPI	CCDG	7 cut(s)	185, 242, 321, 375, 378, 405, 418
LweI	GCATC	2 cut(s)	523, 572
MaeI	CTAG	3 cut(s)	21, 141, 641
MaeIII	GTNAC	3 cut(s)	136, 296, 347
MalI	GATC	1 cut(s)	343
MbiI	CCGCTC	1 cut(s)	584
MboI	GATC	1 cut(s)	341
MboII	GAAGA	1 cut(s)	589
MluCI	AATT	3 cut(s)	249, 269, 460
MlyI	GAGTC	1 cut(s)	581
MnlI	CCTC	4 cut(s)	158, 282, 412, 648
MseI	TTAA	2 cut(s)	219, 414
MslI	CAYNNNNRTG	3 cut(s)	284, 362, 452
MspCI	CTTAAG	1 cut(s)	218
MspI	CCGG	1 cut(s)	362
MspR9I	CCNGG	1 cut(s)	362
NciI	CCSGG	1 cut(s)	362
NdeII	GATC	1 cut(s)	341
NheI	GCTAGC	1 cut(s)	20
NlaIII	CATG	3 cut(s)	128, 348, 451
NlaIV	GGNNCC	1 cut(s)	146
NspI	RCATGY	1 cut(s)	128
OliI	CACNNNNGTG	1 cut(s)	362
PfeI	GAWTC	3 cut(s)	259, 321, 488
PleI	GAGTC	1 cut(s)	580
PpsI	GAGTC	1 cut(s)	580
PspN4I	GGNNCC	1 cut(s)	146
PspPI	GGNCC	1 cut(s)	635
RsaI	GTAC	1 cut(s)	504
RsaNI	GTAC	1 cut(s)	503
RseI	CAYNNNNRTG	3 cut(s)	284, 362, 452
SaqAI	TTAA	2 cut(s)	219, 414
Sau3AI	GATC	1 cut(s)	341
Sau96I	GGNCC	1 cut(s)	635
ScaI	AGTACT	1 cut(s)	504
SchI	GAGTC	1 cut(s)	581
ScrFI	CCNGG	1 cut(s)	362
SetI	ASST	7 cut(s)	39, 168, 293, 317, 404, 547, 656
SfaNI	GCATC	2 cut(s)	523, 572
SinI	GGWCC	1 cut(s)	635
SmiMI	CAYNNNNRTG	3 cut(s)	284, 362, 452
SmlI	CTYRAG	1 cut(s)	218
SmoI	CTYRAG	1 cut(s)	218
Sse9I	AATT	3 cut(s)	249, 269, 460
SsiI	CCGC	1 cut(s)	582
SspI	AATATT	1 cut(s)	412
SspMI	CTAG	3 cut(s)	21, 141, 641
StyD4I	CCNGG	1 cut(s)	360
StyI	CCWWGG	1 cut(s)	601
TaaI	ACNGT	3 cut(s)	136, 302, 336
TasI	AATT	3 cut(s)	249, 269, 460
TatI	WGTACW	1 cut(s)	502
TfiI	GAWTC	3 cut(s)	259, 321, 488
Tru1I	TTAA	2 cut(s)	219, 414
Tru9I	TTAA	2 cut(s)	219, 414
TscAI	CASTG	1 cut(s)	341
TspDTI	ATGAA	1 cut(s)	655
TspRI	CASTG	1 cut(s)	341
Vha464I	CTTAAG	1 cut(s)	218
VpaK11BI	GGWCC	1 cut(s)	635
XceI	RCATGY	1 cut(s)	128
XspI	CTAG	3 cut(s)	21, 141, 641
ZrmI	AGTACT	1 cut(s)	504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.