Prupe.2G249400_v2.0.a1

ABC1 protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
26476539 .. 26481942
5404 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G249400.1

Sequence Viewer

Length: 1623 bp
ATGGCCACGCGATCCTTATGGGGCGCTCGAACGAAGCTCGCTCTGTCGGCGGCCGCGCTCATCGGCGGCGGAGCGGCGGCGAACGTCGCCACCTCCGACGACCCCTCCATGACTTTGAAGCTCTACACAACCGTTCCCCCTCGCCTTATTCGCGACGCCATGACAGCCACTGCCATCGCCTTCGATTATGAGTATTCACTGTGGGGACTGCCTGAAGGAAGCAGTGAGAGGGAAAAAACTAAGCATGAAGTTCACCTGAGGTCTGCACGTAAACTTCAAGAATTATGTTTCAGCAATGGAGGCATATATATCAAGCTCGGTCAACACCTTGGACAGCTGGAATACTTGGTACCCCAAGAGTATGTACAGACAATGAGGGATTCCATGTTGAACAAATGTCCAGTTTCTTCATACGAACAAGTGTGTGAGGTCGTCAAGAAAGAGCTTGGAGATACACCTGATAAAATTTTTGCTGAATTTGATCCTGTTCCAATAGCAAGTGCTTCCCTTGCACAAGTCCATGTTGCTCGCAATCATGATGGCAAAAAAGTGGCTGTGAAGGTTCAGCACACTCACATGACAGATACTGCAGCTGCCGACTGTGCTACTGTGGATTTTATTGTGAACACCCTACACTGGATTTTCCCTTCTTTTGATTACAGGTGGTTGATTGCTGAGATGCGTGAAAGTTTACCAAAGGAACTAGATTTCATAAACGAGGCCCAGAACAGTGAGAAATGCTTGGAAAACTTTCAGAAGCTTTCTCCTCATATTGCAGCTTATGTATATGCACCAAAGGTGTATTGGAATCTAAGTACCTCAAAGTTGTTAACCATGGAATTTATGGATGGCGCAGAAGTAAATGATGTGAAGACCATTAAAAGACTTGGAATTCGACCTGATGAAGTTGCAAGATTAGTTAGTGAAACTTTTGCAGAAATGATGTTCAAACATGGGTTTGTGCATTGTGACCCACATGCTGCCAACTTGTTAGTCCGTCCTCTGCCTTATAGTGGAAAGAGCATTCTAGGCAAGAAAAAACCACAGTTGATACTTCTAGACCACGGTCTGTATAAAGAGCTTGACTTTGAGACCAGAACTAACTATGCTAAACTGTGGAAGGCTTTGATTTTTGCTGATGCCAATGCAATAAAAGAAAATAGTGCAAAATTAGGTGCTGGAGAGGATTTGTATGCATTATTTGCAGGGATTCTTACTATGAGGCCTTGGAATAGGGTCATTGACCCAGCTGTTGATCATTTGGTTATACAGGGCAGCGAAAGTGACCGTTCGGAACTGCAGATGTATGCTTCTCAGTATTTCTCTCAAATCTCAGAGCTTTTGAGGAGGCTGCCACGCGTGATTCTTTTAATGCTGAAGACAAATGATTGTTTACGATCAGTTAGCAATGCTCTGTTGCAGGTACCTTCTCTTGAGACATTCATGATCATTGGAAGGGTTTCTTCTGAAGCAGTCATTGAGGCAAAGCTATCACAAAAGAGATCCTTCCTGCATTGGTTGAGTGCTTGGTTAGACAAAATTCTGTTGGAAGCTCGACTTTTTACAATGCAAGTAGCCTTGTGGCTTCTACAAGGCAGGAAATCTTTGTCTTGGAGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

541

Amino Acids

60.94

Weight (kDa)

8.03

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1411
Acc65I GGTACC 2 cut(s) 349, 1423
AccB1I GGYRCC 2 cut(s) 349, 1423
AccBSI CCGCTC 1 cut(s) 74
AccII CGCG 4 cut(s) 10, 56, 153, 1359
AciI CCGC 6 cut(s) 50, 54, 66, 69, 74, 77
AclWI GGATC 3 cut(s) 6, 476, 1497
AcoI YGGCCR 2 cut(s) 3, 51
AcsI RAATTY 5 cut(s) 465, 476, 839, 891, 1539
AcuI CTGAAG 3 cut(s) 234, 1397, 1488
AcyI GRCGYC 1 cut(s) 156
AfaI GTAC 4 cut(s) 351, 366, 817, 1425
AfiI CCNNNNNNNGG 2 cut(s) 636, 1013
AflIII ACRYGT 1 cut(s) 1357
AgsI TTSAA 4 cut(s) 118, 278, 391, 949
Alw26I GTCTC 2 cut(s) 1085, 1430
AlwI GGATC 3 cut(s) 6, 476, 1497
AlwNI CAGNNNCTG 2 cut(s) 170, 587
AoxI GGCC 4 cut(s) 3, 51, 720, 1223
ApeKI GCWGC 6 cut(s) 590, 593, 776, 980, 1275, 1351
ApoI RAATTY 5 cut(s) 465, 476, 839, 891, 1539
ArsI GACNNNNNNTTYG 2 cut(s) 876, 908
Asp700I GAANNNNTTC 2 cut(s) 750, 1459
Asp718I GGTACC 2 cut(s) 349, 1423
AspLEI GCGC 3 cut(s) 26, 58, 854
AspS9I GGNCC 1 cut(s) 721
AsuHPI GGTGA 1 cut(s) 245
AxyI CCTNAGG 1 cut(s) 257
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 349, 1423
BbsI GAAGAC 2 cut(s) 878, 1385
BbvI GCAGC 6 cut(s) 580, 602, 788, 967, 1287, 1338
BccI CCATC 3 cut(s) 182, 533, 842
BclI TGATCA 2 cut(s) 1255, 1446
BcoDI GTCTC 2 cut(s) 1085, 1430
BfaI CTAG 3 cut(s) 704, 1028, 1058
BfmI CTRYAG 2 cut(s) 588, 1298
BfoI RGCGCY 1 cut(s) 27
BfuAI ACCTGC 1 cut(s) 1411
BmgT120I GGNCC 1 cut(s) 721
BmiI GGNNCC 2 cut(s) 351, 1425
BmsI GCATC 2 cut(s) 669, 1129
BoxI GACNNNNGTC 1 cut(s) 1065
BpiI GAAGAC 2 cut(s) 878, 1385
BpmI CTGGAG 1 cut(s) 1200
BpuEI CTTGAG 1 cut(s) 1454
BsaAI YACGTR 1 cut(s) 269
BsaHI GRCGYC 1 cut(s) 156
BsaI GGTCTC 1 cut(s) 1085
BsaJI CCNNGG 4 cut(s) 328, 834, 1063, 1226
BsaXI ACNNNNNCTCC 2 cut(s) 89, 119
Bsc4I CCNNNNNNNGG 2 cut(s) 636, 1013
Bse1I ACTGG 2 cut(s) 401, 641
Bse21I CCTNAGG 1 cut(s) 257
Bse3DI GCAATG 2 cut(s) 301, 1414
BseDI CCNNGG 4 cut(s) 328, 834, 1063, 1226
BseGI GGATG 1 cut(s) 853
BseLI CCNNNNNNNGG 2 cut(s) 636, 1013
BseMI GCAATG 2 cut(s) 301, 1414
BseMII CTCAG 4 cut(s) 248, 666, 1328, 1347
BseNI ACTGG 2 cut(s) 401, 641
BseRI GAGGAG 2 cut(s) 756, 1360
BseX3I CGGCCG 1 cut(s) 51
BseXI GCAGC 6 cut(s) 580, 602, 788, 967, 1287, 1338
BseYI CCCAGC 1 cut(s) 1246
BsgI GTGCAG 1 cut(s) 249
Bsh1236I CGCG 4 cut(s) 10, 56, 153, 1359
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 4 cut(s) 5, 53, 722, 1225
BshNI GGYRCC 2 cut(s) 349, 1423
BsiEI CGRYCG 1 cut(s) 54
BslFI GGGAC 1 cut(s) 219
BslI CCNNNNNNNGG 2 cut(s) 636, 1013
BsmAI GTCTC 2 cut(s) 1085, 1430
BsmFI GGGAC 1 cut(s) 219
BsmI GAATGC 1 cut(s) 1023
BsnI GGCC 4 cut(s) 5, 53, 722, 1225
Bso31I GGTCTC 1 cut(s) 1085
Bsp1407I TGTACA 1 cut(s) 364
Bsp143I GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
Bsp19I CCATGG 1 cut(s) 834
Bsp68I TCGCGA 1 cut(s) 153
BspACI CCGC 6 cut(s) 50, 54, 66, 69, 74, 77
BspANI GGCC 4 cut(s) 5, 53, 722, 1225
BspCNI CTCAG 4 cut(s) 249, 667, 1327, 1346
BspFNI CGCG 4 cut(s) 10, 56, 153, 1359
BspHI TCATGA 2 cut(s) 535, 1443
BspLI GGNNCC 2 cut(s) 351, 1425
BspMAI CTGCAG 2 cut(s) 592, 1302
BspMI ACCTGC 1 cut(s) 1411
BspPI GGATC 3 cut(s) 6, 476, 1497
BspT107I GGYRCC 2 cut(s) 349, 1423
BspTNI GGTCTC 1 cut(s) 1085
BsrBI CCGCTC 1 cut(s) 74
BsrDI GCAATG 2 cut(s) 301, 1414
BsrGI TGTACA 1 cut(s) 364
BsrI ACTGG 2 cut(s) 401, 641
BssECI CCNNGG 4 cut(s) 328, 834, 1063, 1226
BssMI GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
BssNI GRCGYC 1 cut(s) 156
BssT1I CCWWGG 3 cut(s) 328, 834, 1226
Bst4CI ACNGT 9 cut(s) 133, 201, 602, 610, 731, 1047, 1067, 1116, 1289
BstACI GRCGYC 1 cut(s) 156
BstAPI GCANNNNNTGC 1 cut(s) 1202
BstAUI TGTACA 1 cut(s) 364
BstBAI YACGTR 1 cut(s) 269
BstC8I GCNNGC 2 cut(s) 39, 529
BstDEI CTNAG 6 cut(s) 240, 257, 675, 812, 1314, 1333
BstDSI CCRYGG 2 cut(s) 834, 1063
BstF5I GGATG 1 cut(s) 853
BstFNI CGCG 4 cut(s) 10, 56, 153, 1359
BstH2I RGCGCY 1 cut(s) 27
BstHHI GCGC 3 cut(s) 26, 58, 854
BstKTI GATC 6 cut(s) 14, 484, 1258, 1400, 1449, 1505
BstMAI GTCTC 2 cut(s) 1085, 1430
BstMBI GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 9 cut(s) 47, 86, 150, 164, 300, 509, 602, 1029, 1202
BstNSI RCATGY 1 cut(s) 980
BstPAI GACNNNNGTC 1 cut(s) 1065
BstSFI CTRYAG 2 cut(s) 588, 1298
BstUI CGCG 4 cut(s) 10, 56, 153, 1359
BstV1I GCAGC 6 cut(s) 580, 602, 788, 967, 1287, 1338
BstV2I GAAGAC 2 cut(s) 878, 1385
BstX2I RGATCY 1 cut(s) 1502
BstYI RGATCY 1 cut(s) 1502
BstZI CGGCCG 1 cut(s) 51
Bsu36I CCTNAGG 1 cut(s) 257
BsuRI GGCC 4 cut(s) 5, 53, 722, 1225
BtgI CCRYGG 2 cut(s) 834, 1063
BtgZI GCGATG 1 cut(s) 160
BtsCI GGATG 1 cut(s) 853
BtsI GCAGTG 2 cut(s) 168, 229
BtsIMutI CAGTG 5 cut(s) 168, 197, 229, 634, 736
BtuMI TCGCGA 1 cut(s) 153
BveI ACCTGC 1 cut(s) 1411
Cac8I GCNNGC 2 cut(s) 39, 529
CaiI CAGNNNCTG 2 cut(s) 170, 587
CciI TCATGA 2 cut(s) 535, 1443
CciNI GCGGCCGC 1 cut(s) 51
CfoI GCGC 3 cut(s) 26, 58, 854
Cfr13I GGNCC 1 cut(s) 721
CseI GACGC 1 cut(s) 164
Csp6I GTAC 4 cut(s) 350, 365, 816, 1424
CviQI GTAC 4 cut(s) 350, 365, 816, 1424
DdeI CTNAG 6 cut(s) 240, 257, 675, 812, 1314, 1333
DpnI GATC 6 cut(s) 13, 483, 1257, 1399, 1448, 1504
DpnII GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
EaeI YGGCCR 2 cut(s) 3, 51
EagI CGGCCG 1 cut(s) 51
EciI GGCGGA 1 cut(s) 84
EclXI CGGCCG 1 cut(s) 51
Eco130I CCWWGG 3 cut(s) 328, 834, 1226
Eco147I AGGCCT 1 cut(s) 1225
Eco31I GGTCTC 1 cut(s) 1085
Eco52I CGGCCG 1 cut(s) 51
Eco57I CTGAAG 3 cut(s) 234, 1397, 1488
Eco81I CCTNAGG 1 cut(s) 257
EcoRI GAATTC 1 cut(s) 891
EcoT14I CCWWGG 3 cut(s) 328, 834, 1226
EcoT22I ATGCAT 1 cut(s) 1198
ErhI CCWWGG 3 cut(s) 328, 834, 1226
FalI AAGNNNNNCTT 6 cut(s) 1447, 1479, 1490, 1522, 1542, 1574
FaqI GGGAC 1 cut(s) 219
FbaI TGATCA 2 cut(s) 1255, 1446
FokI GGATG 1 cut(s) 860
FspBI CTAG 3 cut(s) 704, 1028, 1058
GlaI GCGC 3 cut(s) 25, 57, 853
GsaI CCCAGC 1 cut(s) 1250
GsuI CTGGAG 1 cut(s) 1200
HaeII RGCGCY 1 cut(s) 27
HaeIII GGCC 4 cut(s) 5, 53, 722, 1225
HgaI GACGC 1 cut(s) 164
HhaI GCGC 3 cut(s) 26, 58, 854
Hin1I GRCGYC 1 cut(s) 156
Hin6I GCGC 3 cut(s) 24, 56, 852
HinP1I GCGC 3 cut(s) 24, 56, 852
HincII GTYRAC 2 cut(s) 323, 831
HindII GTYRAC 2 cut(s) 323, 831
HindIII AAGCTT 1 cut(s) 758
HinfI GANTC 4 cut(s) 380, 808, 1210, 1363
HpaI GTTAAC 1 cut(s) 831
HphI GGTGA 1 cut(s) 245
Hpy166II GTNNAC 7 cut(s) 253, 272, 323, 625, 692, 831, 1394
Hpy188I TCNGA 5 cut(s) 97, 756, 1294, 1336, 1468
Hpy188III TCNNGA 7 cut(s) 152, 278, 436, 536, 1058, 1433, 1444
Hpy8I GTNNAC 7 cut(s) 253, 272, 323, 625, 692, 831, 1394
Hpy99I CGWCG 3 cut(s) 89, 101, 158
HpyAV CCTTC 8 cut(s) 190, 209, 553, 657, 1114, 1437, 1449, 1516
HpyCH4III ACNGT 9 cut(s) 133, 201, 602, 610, 731, 1047, 1067, 1116, 1289
HpyCH4IV ACGT 2 cut(s) 84, 268
HpyF10VI GCNNNNNNNGC 9 cut(s) 47, 86, 150, 164, 300, 509, 602, 1029, 1202
HpyF3I CTNAG 6 cut(s) 240, 257, 675, 812, 1314, 1333
HpySE526I ACGT 2 cut(s) 84, 268
Hsp92I GRCGYC 1 cut(s) 156
HspAI GCGC 3 cut(s) 24, 56, 852
KpnI GGTACC 2 cut(s) 353, 1427
Ksp22I TGATCA 2 cut(s) 1255, 1446
KspAI GTTAAC 1 cut(s) 831
Kzo9I GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
LmnI GCTCC 1 cut(s) 71
Lsp1109I GCAGC 6 cut(s) 580, 602, 788, 967, 1287, 1338
LweI GCATC 2 cut(s) 669, 1129
MaeI CTAG 3 cut(s) 704, 1028, 1058
MaeII ACGT 2 cut(s) 84, 268
MaeIII GTNAC 2 cut(s) 968, 1283
MalI GATC 6 cut(s) 13, 483, 1257, 1399, 1448, 1504
MbiI CCGCTC 1 cut(s) 74
MboI GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
MboII GAAGA 4 cut(s) 399, 883, 1390, 1455
MflI RGATCY 1 cut(s) 1502
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 281, 465, 476, 839, 891, 1169, 1539
MluI ACGCGT 1 cut(s) 1357
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 2 cut(s) 120, 1527
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 1198
MroXI GAANNNNTTC 2 cut(s) 750, 1459
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 830, 879, 1370
MslI CAYNNNNRTG 1 cut(s) 575
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 337, 593, 1250
Mva1269I GAATGC 1 cut(s) 1023
MvnI CGCG 4 cut(s) 10, 56, 153, 1359
MwoI GCNNNNNNNGC 9 cut(s) 47, 86, 150, 164, 300, 509, 602, 1029, 1202
NcoI CCATGG 1 cut(s) 834
NdeII GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
NlaIV GGNNCC 2 cut(s) 351, 1425
NmuCI GTSAC 2 cut(s) 968, 1283
NotI GCGGCCGC 1 cut(s) 51
NruI TCGCGA 1 cut(s) 153
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 1 cut(s) 980
PagI TCATGA 2 cut(s) 535, 1443
PceI AGGCCT 1 cut(s) 1225
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PctI GAATGC 1 cut(s) 1023
PdmI GAANNNNTTC 2 cut(s) 750, 1459
PfeI GAWTC 4 cut(s) 380, 808, 1210, 1363
Ppu21I YACGTR 1 cut(s) 269
PshAI GACNNNNGTC 1 cut(s) 1065
PspFI CCCAGC 1 cut(s) 1246
PspN4I GGNNCC 2 cut(s) 351, 1425
PspPI GGNCC 1 cut(s) 721
PstI CTGCAG 2 cut(s) 592, 1302
PstNI CAGNNNCTG 2 cut(s) 170, 587
PsuI RGATCY 1 cut(s) 1502
PvuII CAGCTG 3 cut(s) 337, 593, 1250
RruI TCGCGA 1 cut(s) 153
RsaI GTAC 4 cut(s) 351, 366, 817, 1425
RsaNI GTAC 4 cut(s) 350, 365, 816, 1424
RseI CAYNNNNRTG 1 cut(s) 575
SaqAI TTAA 3 cut(s) 830, 879, 1370
Sau3AI GATC 6 cut(s) 11, 481, 1255, 1397, 1446, 1502
Sau96I GGNCC 1 cut(s) 721
SfaNI GCATC 2 cut(s) 669, 1129
SfcI CTRYAG 2 cut(s) 588, 1298
SmiMI CAYNNNNRTG 1 cut(s) 575
SmlI CTYRAG 1 cut(s) 1433
SmoI CTYRAG 1 cut(s) 1433
Sse9I AATT 7 cut(s) 281, 465, 476, 839, 891, 1169, 1539
SseBI AGGCCT 1 cut(s) 1225
SsiI CCGC 6 cut(s) 50, 54, 66, 69, 74, 77
SspMI CTAG 3 cut(s) 704, 1028, 1058
StuI AGGCCT 1 cut(s) 1225
StyI CCWWGG 3 cut(s) 328, 834, 1226
TaaI ACNGT 9 cut(s) 133, 201, 602, 610, 731, 1047, 1067, 1116, 1289
TaiI ACGT 2 cut(s) 87, 271
TaqI TCGA 4 cut(s) 28, 183, 895, 1555
TaqII GACCGA 1 cut(s) 308
TasI AATT 7 cut(s) 281, 465, 476, 839, 891, 1169, 1539
TatI WGTACW 1 cut(s) 364
TauI GCSGC 5 cut(s) 53, 56, 69, 77, 80
TfiI GAWTC 4 cut(s) 380, 808, 1210, 1363
Tru1I TTAA 3 cut(s) 830, 879, 1370
Tru9I TTAA 3 cut(s) 830, 879, 1370
TscAI CASTG 5 cut(s) 175, 204, 229, 641, 736
TseFI GTSAC 2 cut(s) 968, 1283
TseI GCWGC 6 cut(s) 590, 593, 776, 980, 1275, 1351
Tsp45I GTSAC 2 cut(s) 968, 1283
TspDTI ATGAA 5 cut(s) 261, 399, 700, 918, 1432
TspGWI ACGGA 1 cut(s) 986
TspRI CASTG 5 cut(s) 175, 204, 229, 641, 736
XapI RAATTY 5 cut(s) 465, 476, 839, 891, 1539
XbaI TCTAGA 1 cut(s) 1057
XceI RCATGY 1 cut(s) 980
XcmI CCANNNNNNNNNTGG 2 cut(s) 801, 841
XmnI GAANNNNTTC 2 cut(s) 750, 1459
XspI CTAG 3 cut(s) 704, 1028, 1058
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.