Prupe.2G269500_v2.0.a1

Cell division cycle

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
27418981 .. 27422562
3582 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G269500.1

Sequence Viewer

Length: 1365 bp
ATGTGGGAACTTCAATCGGATTGGTACTCCCCTACTCGCCTGAACAGCAACCCCATTACCCAATACGACTTTCCGGGAGATCGGTTTATACCCAATAGGAGTTTGATGGATCTTGATCAAGCCCGCAGTTTACTGTCAAACAGGACAACACCAAACCGGAACTCGAATTTCAATGAGGTGTACAGGAAGAGCATAGAGGACAAACTGACTTTGGATTCAGAAGGGAACCCATTTAGGATGTTGGTTTTTAGGGGAAGTCCAAAATCAAACAGAAAGTCCATTCGTTGTGTTGATCTGATGCGACAGGATGAGGCAAAGGAATTGGATGGTAATGGTAAACACCATCAGCCTCGAAGATTGCCTAAGGGGGAAGCTAGAATTCTGGATGCACCAAACATAAGAAATGACTTTTACATGAGCACCATGGATTGGGGGAAGAACAATGTCATTGCAATTGCTTTAGGCAAAGATTTATTCCTTTGGAACGCAGAGAACCGAGAGGTTCATAAGCTGTTGCAAGTTGATGATCTGAATGATTTTCCATCAAGTGTAGCCTGGTCTCAAGATGCCAAAACTGTAGCAGTTGGATTTAGGCGTTCAAAACTCCAATTGTGGGATGCTGAGACTTCTAAGCTTGTTAGAAGCCTAGAAAACCACAAGGACAGGATAGCAAGCATTACATGGAATGGCCACACATTAACATCCGGCAGCCGCGACAAGTCCATCATCAACCATGATGTCAGAGCGGGAAGCAATGTGACTTGCCGTTTACGGACACACACTGAAGAAGTCTGTGGTTTGAAATGGTCAGGAGAAGGCAATGTATTGGCAAGCGGCGGCAATGAAAATCTTCTGTACATATGGGACTCTTCCAAAATGAACTCACAGAGATTCTTGTTTCGTCTTAAAGACCATCGTGCTGCAGTCAAGGCCCTTGCATGGTGTCCTTATCAGTCTGAAGTGCTAGCCTCCGGGGCAGGCACGAAAGATGGGTGTATTAAGATATGGAACACAAAAAAGGGAACCTGCATCAAAAGCATTGCTACCGAAGCTCAGGTTTGTGGACTGGAGTGGAACAGGCATCACAAGGAGATAATGAGTGGCCATGGCTATAGTGCAAGCGAGCTCATCAAGAATCAGCTCTGCCTTTGGAGGTATCCCTCCATGGATAAAGTCGGAAGCTTGAATCGCTACACATCCAGAGTCCTTCATCTTTCTCAGAGCCCTGATGGGTTAACTGTGGTATCAGCTGTGGCAGATGGCTCTCTTCGATTTTTGGAGGTCTTTGGACCACCAAGCATTGACAAATCAAGGATCTCCCCTCTGGATGGTCTATTGTCTCTTAAGATTTCTCCCATAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

455

Amino Acids

51.4

Weight (kDa)

9.32

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1034
AccB7I CCANNNNNTGG 1 cut(s) 429
AccBSI CCGCTC 1 cut(s) 746
AccII CGCG 1 cut(s) 714
AciI CCGC 5 cut(s) 124, 712, 746, 834, 837
AclWI GGATC 2 cut(s) 117, 1322
AcoI YGGCCR 2 cut(s) 688, 1102
AcsI RAATTY 2 cut(s) 166, 378
AcuI CTGAAG 2 cut(s) 804, 978
AfaI GTAC 3 cut(s) 26, 182, 857
AfiI CCNNNNNNNGG 4 cut(s) 429, 613, 939, 1328
AflII CTTAAG 1 cut(s) 1343
AgsI TTSAA 5 cut(s) 14, 172, 600, 802, 1186
AjnI CCWGG 1 cut(s) 554
AjuI GAANNNNNNNTTGG 2 cut(s) 54, 86
AluBI AGCT 8 cut(s) 374, 511, 634, 1052, 1126, 1141, 1182, 1250
AluI AGCT 8 cut(s) 374, 511, 634, 1052, 1126, 1141, 1182, 1250
Alw21I GWGCWC 2 cut(s) 422, 1128
Alw26I GTCTC 3 cut(s) 564, 617, 1344
AlwI GGATC 2 cut(s) 117, 1322
AoxI GGCC 3 cut(s) 688, 930, 1102
ApeKI GCWGC 2 cut(s) 708, 920
ApoI RAATTY 2 cut(s) 166, 378
ArsI GACNNNNNNTTYG 2 cut(s) 260, 292
Asp700I GAANNNNTTC 1 cut(s) 849
AspS9I GGNCC 2 cut(s) 931, 1289
AsuC2I CCSGG 2 cut(s) 75, 973
AsuNHI GCTAGC 1 cut(s) 964
AvaII GGWCC 1 cut(s) 1289
AxyI CCTNAGG 1 cut(s) 363
BaeI ACNNNNGTAYC 2 cut(s) 1227, 1260
BalI TGGCCA 2 cut(s) 690, 1104
BanII GRGCYC 2 cut(s) 1128, 1226
Bbv12I GWGCWC 2 cut(s) 422, 1128
BbvI GCAGC 2 cut(s) 720, 907
BceAI ACGGC 1 cut(s) 750
BciT130I CCWGG 1 cut(s) 556
BciVI GTATCC 1 cut(s) 1167
BclI TGATCA 1 cut(s) 115
BcnI CCSGG 2 cut(s) 75, 973
BcoDI GTCTC 3 cut(s) 564, 617, 1344
BfaI CTAG 3 cut(s) 375, 647, 965
BfmI CTRYAG 3 cut(s) 576, 921, 1111
BfrI CTTAAG 1 cut(s) 1343
BfuAI ACCTGC 1 cut(s) 1034
BfuI GTATCC 1 cut(s) 1167
BglI GCCNNNNNGGC 1 cut(s) 974
BisI GCNGC 5 cut(s) 709, 712, 835, 838, 921
BlsI GCNGC 5 cut(s) 710, 713, 836, 839, 922
Bme1390I CCNGG 3 cut(s) 75, 556, 973
Bme18I GGWCC 1 cut(s) 1289
BmgT120I GGNCC 2 cut(s) 931, 1289
BmiI GGNNCC 2 cut(s) 227, 1024
BmrFI CCNGG 3 cut(s) 75, 556, 973
BmsI GCATC 6 cut(s) 288, 376, 556, 607, 1038, 1090
BmtI GCTAGC 1 cut(s) 968
BpmI CTGGAG 1 cut(s) 1088
Bpu10I CCTNAGC 1 cut(s) 1053
BpuEI CTTGAG 1 cut(s) 546
BpuMI CCSGG 2 cut(s) 75, 973
BsaBI GATNNNNATC 1 cut(s) 114
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 4 cut(s) 423, 972, 1105, 1164
BsaWI WCCGGW 1 cut(s) 156
Bsc4I CCNNNNNNNGG 4 cut(s) 429, 613, 939, 1328
Bse1I ACTGG 1 cut(s) 1071
Bse21I CCTNAGG 1 cut(s) 363
Bse3DI GCAATG 5 cut(s) 447, 760, 826, 847, 1038
Bse8I GATNNNNATC 1 cut(s) 114
BseBI CCWGG 1 cut(s) 556
BseDI CCNNGG 4 cut(s) 423, 972, 1105, 1164
BseGI GGATG 8 cut(s) 243, 313, 331, 391, 622, 701, 1196, 1333
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 4 cut(s) 429, 613, 939, 1328
BseMI GCAATG 5 cut(s) 447, 760, 826, 847, 1038
BseMII CTCAG 3 cut(s) 612, 1067, 1232
BseNI ACTGG 1 cut(s) 1071
BseXI GCAGC 2 cut(s) 720, 907
Bsh1236I CGCG 1 cut(s) 714
BshFI GGCC 3 cut(s) 690, 932, 1104
BsiHKAI GWGCWC 2 cut(s) 422, 1128
BsiSI CCGG 4 cut(s) 74, 157, 705, 972
BslFI GGGAC 1 cut(s) 878
BslI CCNNNNNNNGG 4 cut(s) 429, 613, 939, 1328
BsmAI GTCTC 3 cut(s) 564, 617, 1344
BsmFI GGGAC 1 cut(s) 878
BsnI GGCC 3 cut(s) 690, 932, 1104
Bso31I GGTCTC 1 cut(s) 564
Bsp1286I GDGCHC 3 cut(s) 422, 1128, 1226
Bsp1407I TGTACA 2 cut(s) 180, 855
Bsp143I GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
Bsp19I CCATGG 3 cut(s) 423, 1105, 1164
BspACI CCGC 5 cut(s) 124, 712, 746, 834, 837
BspANI GGCC 3 cut(s) 690, 932, 1104
BspCNI CTCAG 3 cut(s) 613, 1066, 1231
BspFNI CGCG 1 cut(s) 714
BspLI GGNNCC 2 cut(s) 227, 1024
BspMAI CTGCAG 1 cut(s) 925
BspMI ACCTGC 1 cut(s) 1034
BspOI GCTAGC 1 cut(s) 968
BspPI GGATC 2 cut(s) 117, 1322
BspQI GCTCTTC 1 cut(s) 182
BspTI CTTAAG 1 cut(s) 1343
BspTNI GGTCTC 1 cut(s) 564
BsrBI CCGCTC 1 cut(s) 746
BsrDI GCAATG 5 cut(s) 447, 760, 826, 847, 1038
BsrGI TGTACA 2 cut(s) 180, 855
BsrI ACTGG 1 cut(s) 1071
BssECI CCNNGG 4 cut(s) 423, 972, 1105, 1164
BssMI GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
BssT1I CCWWGG 3 cut(s) 423, 1105, 1164
Bst2UI CCWGG 1 cut(s) 556
Bst4CI ACNGT 3 cut(s) 135, 577, 1240
Bst6I CTCTTC 3 cut(s) 182, 874, 1272
BstAFI CTTAAG 1 cut(s) 1343
BstAUI TGTACA 2 cut(s) 180, 855
BstC8I GCNNGC 7 cut(s) 124, 673, 832, 966, 979, 1120, 1124
BstDEI CTNAG 5 cut(s) 363, 621, 630, 1053, 1218
BstDSI CCRYGG 3 cut(s) 423, 1105, 1164
BstF5I GGATG 8 cut(s) 243, 313, 331, 391, 622, 701, 1196, 1333
BstFNI CGCG 1 cut(s) 714
BstKTI GATC 6 cut(s) 82, 112, 118, 295, 529, 1317
BstMAI GTCTC 3 cut(s) 564, 617, 1344
BstMBI GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
BstMWI GCNNNNNNNGC 6 cut(s) 45, 929, 974, 1035, 1049, 1188
BstNI CCWGG 1 cut(s) 556
BstSCI CCNGG 3 cut(s) 73, 554, 971
BstSFI CTRYAG 3 cut(s) 576, 921, 1111
BstUI CGCG 1 cut(s) 714
BstV1I GCAGC 2 cut(s) 720, 907
BstX2I RGATCY 2 cut(s) 109, 1314
BstYI RGATCY 2 cut(s) 109, 1314
Bsu36I CCTNAGG 1 cut(s) 363
BsuI GTATCC 1 cut(s) 1167
BsuRI GGCC 3 cut(s) 690, 932, 1104
BtgI CCRYGG 3 cut(s) 423, 1105, 1164
BtsCI GGATG 8 cut(s) 243, 313, 331, 391, 622, 701, 1196, 1333
BtsIMutI CAGTG 1 cut(s) 780
BveI ACCTGC 1 cut(s) 1034
Cac8I GCNNGC 7 cut(s) 124, 673, 832, 966, 979, 1120, 1124
Cfr13I GGNCC 2 cut(s) 931, 1289
Csp6I GTAC 3 cut(s) 25, 181, 856
CviAII CATG 7 cut(s) 415, 424, 681, 734, 939, 1106, 1165
CviQI GTAC 3 cut(s) 25, 181, 856
DdeI CTNAG 5 cut(s) 363, 621, 630, 1053, 1218
DpnI GATC 6 cut(s) 81, 111, 117, 294, 528, 1316
DpnII GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
EaeI YGGCCR 2 cut(s) 688, 1102
Eam1104I CTCTTC 3 cut(s) 182, 874, 1272
EarI CTCTTC 3 cut(s) 182, 874, 1272
Ecl136II GAGCTC 1 cut(s) 1126
Eco130I CCWWGG 3 cut(s) 423, 1105, 1164
Eco24I GRGCYC 2 cut(s) 1128, 1226
Eco31I GGTCTC 1 cut(s) 564
Eco47I GGWCC 1 cut(s) 1289
Eco53kI GAGCTC 1 cut(s) 1126
Eco57I CTGAAG 2 cut(s) 804, 978
Eco81I CCTNAGG 1 cut(s) 363
EcoICRI GAGCTC 1 cut(s) 1126
EcoO109I RGGNCCY 1 cut(s) 931
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 1 cut(s) 554
EcoT14I CCWWGG 3 cut(s) 423, 1105, 1164
EcoT38I GRGCYC 2 cut(s) 1128, 1226
ErhI CCWWGG 3 cut(s) 423, 1105, 1164
FaeI CATG 7 cut(s) 418, 427, 684, 737, 942, 1109, 1168
FaqI GGGAC 1 cut(s) 878
FatI CATG 7 cut(s) 414, 423, 680, 733, 938, 1105, 1164
FauI CCCGC 2 cut(s) 131, 739
FauNDI CATATG 1 cut(s) 860
FbaI TGATCA 1 cut(s) 115
Fnu4HI GCNGC 5 cut(s) 709, 712, 835, 838, 921
FokI GGATG 8 cut(s) 250, 320, 338, 398, 629, 688, 1183, 1340
FriOI GRGCYC 2 cut(s) 1128, 1226
Fsp4HI GCNGC 5 cut(s) 709, 712, 835, 838, 921
FspBI CTAG 3 cut(s) 375, 647, 965
GluI GCNGC 5 cut(s) 709, 712, 835, 838, 921
GsuI CTGGAG 1 cut(s) 1088
HaeIII GGCC 3 cut(s) 690, 932, 1104
HapII CCGG 4 cut(s) 74, 157, 705, 972
Hin1II CATG 7 cut(s) 418, 427, 684, 737, 942, 1109, 1168
HincII GTYRAC 1 cut(s) 1236
HindII GTYRAC 1 cut(s) 1236
HindIII AAGCTT 2 cut(s) 632, 1180
HinfI GANTC 6 cut(s) 215, 866, 891, 1135, 1186, 1203
HpaI GTTAAC 1 cut(s) 1236
HpaII CCGG 4 cut(s) 74, 157, 705, 972
Hpy166II GTNNAC 6 cut(s) 131, 181, 338, 770, 1064, 1236
Hpy188I TCNGA 8 cut(s) 19, 220, 297, 531, 743, 958, 1178, 1221
Hpy188III TCNNGA 7 cut(s) 113, 383, 563, 810, 1132, 1200, 1325
Hpy8I GTNNAC 6 cut(s) 131, 181, 338, 770, 1064, 1236
HpyAV CCTTC 3 cut(s) 215, 809, 1217
HpyCH4III ACNGT 3 cut(s) 135, 577, 1240
HpyCH4V TGCA 7 cut(s) 389, 452, 517, 923, 938, 1029, 1118
HpyF10VI GCNNNNNNNGC 6 cut(s) 45, 929, 974, 1035, 1049, 1188
HpyF3I CTNAG 5 cut(s) 363, 621, 630, 1053, 1218
Hsp92II CATG 7 cut(s) 418, 427, 684, 737, 942, 1109, 1168
Ksp22I TGATCA 1 cut(s) 115
KspAI GTTAAC 1 cut(s) 1236
Kzo9I GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
LguI GCTCTTC 1 cut(s) 182
Lsp1109I GCAGC 2 cut(s) 720, 907
LweI GCATC 6 cut(s) 288, 376, 556, 607, 1038, 1090
MaeI CTAG 3 cut(s) 375, 647, 965
MaeIII GTNAC 1 cut(s) 757
MalI GATC 6 cut(s) 81, 111, 117, 294, 528, 1316
MbiI CCGCTC 1 cut(s) 746
MboI GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
MboII GAAGA 7 cut(s) 199, 366, 448, 797, 842, 861, 1259
MfeI CAATTG 2 cut(s) 453, 608
MflI RGATCY 2 cut(s) 109, 1314
MhlI GDGCHC 3 cut(s) 422, 1128, 1226
MlsI TGGCCA 2 cut(s) 690, 1104
MluCI AATT 5 cut(s) 166, 320, 378, 453, 608
MluNI TGGCCA 2 cut(s) 690, 1104
MlyI GAGTC 2 cut(s) 860, 1212
MmeI TCCRAC 2 cut(s) 565, 1156
Mox20I TGGCCA 2 cut(s) 690, 1104
MroXI GAANNNNTTC 1 cut(s) 849
MscI TGGCCA 2 cut(s) 690, 1104
MseI TTAA 5 cut(s) 698, 906, 999, 1235, 1344
Msp20I TGGCCA 2 cut(s) 690, 1104
MspA1I CMGCKG 1 cut(s) 1250
MspCI CTTAAG 1 cut(s) 1343
MspI CCGG 4 cut(s) 74, 157, 705, 972
MspR9I CCNGG 3 cut(s) 75, 556, 973
MunI CAATTG 2 cut(s) 453, 608
MvaI CCWGG 1 cut(s) 556
MvnI CGCG 1 cut(s) 714
MwoI GCNNNNNNNGC 6 cut(s) 45, 929, 974, 1035, 1049, 1188
NciI CCSGG 2 cut(s) 75, 973
NcoI CCATGG 3 cut(s) 423, 1105, 1164
NdeI CATATG 1 cut(s) 860
NdeII GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
NheI GCTAGC 1 cut(s) 964
NlaIII CATG 7 cut(s) 418, 427, 684, 737, 942, 1109, 1168
NlaIV GGNNCC 2 cut(s) 227, 1024
NmuCI GTSAC 1 cut(s) 757
PciSI GCTCTTC 1 cut(s) 182
PdmI GAANNNNTTC 1 cut(s) 849
PfeI GAWTC 4 cut(s) 215, 891, 1135, 1186
PflMI CCANNNNNTGG 1 cut(s) 429
PfoI TCCNGGA 1 cut(s) 73
PkrI GCNGC 5 cut(s) 710, 713, 836, 839, 922
PleI GAGTC 2 cut(s) 860, 1211
PpsI GAGTC 2 cut(s) 860, 1211
Psp124BI GAGCTC 1 cut(s) 1128
Psp6I CCWGG 1 cut(s) 554
PspGI CCWGG 1 cut(s) 554
PspN4I GGNNCC 2 cut(s) 227, 1024
PspPI GGNCC 2 cut(s) 931, 1289
PstI CTGCAG 1 cut(s) 925
PsuI RGATCY 2 cut(s) 109, 1314
PvuII CAGCTG 1 cut(s) 1250
RsaI GTAC 3 cut(s) 26, 182, 857
RsaNI GTAC 3 cut(s) 25, 181, 856
SacI GAGCTC 1 cut(s) 1128
SapI GCTCTTC 1 cut(s) 182
SaqAI TTAA 5 cut(s) 698, 906, 999, 1235, 1344
SatI GCNGC 5 cut(s) 709, 712, 835, 838, 921
Sau3AI GATC 6 cut(s) 79, 109, 115, 292, 526, 1314
Sau96I GGNCC 2 cut(s) 931, 1289
SchI GAGTC 2 cut(s) 860, 1212
ScrFI CCNGG 3 cut(s) 75, 556, 973
SduI GDGCHC 3 cut(s) 422, 1128, 1226
SfaNI GCATC 6 cut(s) 288, 376, 556, 607, 1038, 1090
SfcI CTRYAG 3 cut(s) 576, 921, 1111
SinI GGWCC 1 cut(s) 1289
SmlI CTYRAG 2 cut(s) 561, 1343
SmoI CTYRAG 2 cut(s) 561, 1343
Sse9I AATT 5 cut(s) 166, 320, 378, 453, 608
SsiI CCGC 5 cut(s) 124, 712, 746, 834, 837
SspMI CTAG 3 cut(s) 375, 647, 965
SstI GAGCTC 1 cut(s) 1128
StyD4I CCNGG 3 cut(s) 73, 554, 971
StyI CCWWGG 3 cut(s) 423, 1105, 1164
TaaI ACNGT 3 cut(s) 135, 577, 1240
TaqI TCGA 3 cut(s) 164, 352, 1270
TasI AATT 5 cut(s) 166, 320, 378, 453, 608
TatI WGTACW 2 cut(s) 180, 855
TauI GCSGC 3 cut(s) 714, 837, 840
TfiI GAWTC 4 cut(s) 215, 891, 1135, 1186
Tru1I TTAA 5 cut(s) 698, 906, 999, 1235, 1344
Tru9I TTAA 5 cut(s) 698, 906, 999, 1235, 1344
TscAI CASTG 1 cut(s) 787
TseFI GTSAC 1 cut(s) 757
TseI GCWGC 2 cut(s) 708, 920
Tsp45I GTSAC 1 cut(s) 757
TspDTI ATGAA 4 cut(s) 494, 858, 893, 1199
TspGWI ACGGA 1 cut(s) 787
TspRI CASTG 1 cut(s) 787
Van91I CCANNNNNTGG 1 cut(s) 429
Vha464I CTTAAG 1 cut(s) 1343
VpaK11BI GGWCC 1 cut(s) 1289
XapI RAATTY 2 cut(s) 166, 378
XmnI GAANNNNTTC 1 cut(s) 849
XspI CTAG 3 cut(s) 375, 647, 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.