Prupe.2G280800_v2.0.a1

Phosphate-induced protein 1 conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0014954
Physical Location & Seq
Reverse (-)
27982251 .. 27984074
1824 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G280800.1

Sequence Viewer

Length: 1047 bp
ATGCGCCAGGGCTGTACCGGTCGGTTTTCTCAGCCACCGGCTCCGGTGCTCTTCCTCCTCATCGCACTTACCGTGCTCCTCTCCACCGCGCCAGTGATTGGATGGCGTCCCTGGCCCCACCTTAAATCCAACGCCACCGATCTCCAACTCGGAGACAACAAAAAATTCGAGGGCTCATCTGAGTTCGTCCATTTGAAATACCATATGGGCCCGGTCCTAACCGCCAATATAACCGTCCACACAATCTGGTACGGCACGTGGCAGCCGGCCCAGAAGAAGATCATCCGCGAGTTCATCAACTCAATCTCCGCCGCCGGTTCCAAACGCCCCTCCGTCGCCGGATGGTGGAAGACTGTACAGCTGTACACGGACCAGACCGGCGCGAACATTTCCCGTACGGTGCGCCTCGGCTCAGAGAAAAACGACCGCTTTTACTCCCACGGCAAAACCCTAACCCGGTTATCCATACAGTCTGTGATCAAAAGCGCCGTCACAGCCAGAACGCGGCCGTTGCCTATCAGCCCCCAGAATGGGCTCTACCTCCTACTCACATCTGATGACGTGTACGTTCAGGATTTCTGCAGACAGGTGTGTGGGTTCCATTACTTCACTTTCCCGTCCATCGTCGGATACACGTTGCCGTACGCTTGGATTGGCAACTCAGCCAAACTGTGCCCAGGTGTGTGCGCATACCCATTCGCCGTACCCGATTTTATGCCCGGGTTGAAACCGTTAAAGTCACCGAACGGTGACGTAGGAGTGGAGGGGATGATAAGCGTTATCGCACACGAGATTGCTGAGCTGGCAAGCAACCCTTTAGTAAACGCCTGGTATGCGGGTCAGGACCCGAGTTTCCCTGTTGAGATTGCCGATCTATGCGAGGGCATCTACGGTACCGGAGGCGGCGGGTCGTACACGGGTCAGCTGTTGGACGACCACGATGGTGCCACGTACAATATGAATGGGATCCGACGGAAGTTCTTGGTTCAGTGGGTTTGGAGCCACATTTTAAATTACTGTACCGGACCGAATGCACTTGACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0009505 GO:0009506 GO:0009628 GO:0030054 GO:0030312 GO:0044464 GO:0050896 GO:0055044 GO:0071944 GO:0080167
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Phi_1

Protein Analysis

349

Amino Acids

38.37

Weight (kDa)

8.74

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014954)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51550
fragaria_vesca FvH4_7g27970
malus_domestica MD01G1184600.v1.1
prunus_persica Prupe.2G280800_v2.0.a1
pyrus_communis pycom01g19620 pycom07g22950
rosa_chinensis RchiOBHm_Chr1g0374921
rosa_laevigata RLG00000026706
rosa_multiflora Rmu_sc0003145.1_g000010
rosa_roxburghii Rroxscaffold_4G00283170
rosa_rugosa Rorug01G0386000
rosa_samantha Rh1AG397500 Rh1BG361400 Rh1CG375000 Rh1DG392400
rosa_wichuraiana Rw1G035250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 688
Acc65I GGTACC 1 cut(s) 893
AccB1I GGYRCC 2 cut(s) 893, 944
AccB7I CCANNNNNTGG 1 cut(s) 98
AccII CGCG 4 cut(s) 89, 288, 383, 505
AclWI GGATC 2 cut(s) 961, 974
AcoI YGGCCR 1 cut(s) 506
AcsI RAATTY 1 cut(s) 164
AcvI CACGTG 1 cut(s) 258
AcyI GRCGYC 1 cut(s) 106
AfiI CCNNNNNNNGG 6 cut(s) 98, 345, 456, 504, 530, 531
AflIII ACRYGT 2 cut(s) 561, 633
AgeI ACCGGT 1 cut(s) 17
AgsI TTSAA 2 cut(s) 196, 727
AjiI CACGTC 1 cut(s) 562
AjnI CCWGG 4 cut(s) 6, 110, 676, 827
AleI CACNNNNGTG 1 cut(s) 942
AluBI AGCT 3 cut(s) 361, 802, 925
AluI AGCT 3 cut(s) 361, 802, 925
Alw21I GWGCWC 2 cut(s) 51, 78
Alw26I GTCTC 1 cut(s) 147
AlwI GGATC 2 cut(s) 961, 974
Ama87I CYCGRG 2 cut(s) 719, 847
AoxI GGCC 4 cut(s) 113, 208, 267, 506
ApaI GGGCCC 1 cut(s) 212
ApeKI GCWGC 1 cut(s) 262
ApoI RAATTY 1 cut(s) 164
ArsI GACNNNNNNTTYG 2 cut(s) 474, 506
AsiGI ACCGGT 1 cut(s) 17
Asp718I GGTACC 1 cut(s) 893
AspLEI GCGC 6 cut(s) 6, 91, 383, 405, 488, 689
AspS9I GGNCC 8 cut(s) 114, 208, 209, 214, 268, 370, 844, 1025
AsuC2I CCSGG 4 cut(s) 212, 457, 720, 721
AsuHPI GGTGA 2 cut(s) 732, 761
AvaI CYCGRG 2 cut(s) 719, 847
AvaII GGWCC 4 cut(s) 214, 370, 844, 1025
BaeGI GKGCMC 2 cut(s) 212, 677
BamHI GGATCC 1 cut(s) 966
BanI GGYRCC 2 cut(s) 893, 944
BanII GRGCYC 3 cut(s) 176, 212, 537
BauI CACGAG 1 cut(s) 788
BbrPI CACGTG 1 cut(s) 258
BbsI GAAGAC 1 cut(s) 356
Bbv12I GWGCWC 2 cut(s) 51, 78
BbvI GCAGC 1 cut(s) 274
BccI CCATC 4 cut(s) 96, 336, 629, 935
BceAI ACGGC 6 cut(s) 268, 457, 473, 493, 625, 686
BciT130I CCWGG 4 cut(s) 8, 112, 678, 829
BciVI GTATCC 1 cut(s) 623
BclI TGATCA 1 cut(s) 477
BcnI CCSGG 4 cut(s) 212, 457, 720, 721
BcoDI GTCTC 1 cut(s) 147
BfmI CTRYAG 1 cut(s) 580
BfoI RGCGCY 1 cut(s) 489
BfuI GTATCC 1 cut(s) 623
BisI GCNGC 4 cut(s) 263, 312, 506, 904
BlpI GCTNAGC 1 cut(s) 798
BlsI GCNGC 4 cut(s) 264, 313, 507, 905
Bme1390I CCNGG 8 cut(s) 8, 112, 212, 457, 678, 720, 721, 829
Bme18I GGWCC 4 cut(s) 214, 370, 844, 1025
BmeT110I CYCGRG 2 cut(s) 719, 847
BmgBI CACGTC 1 cut(s) 562
BmgT120I GGNCC 8 cut(s) 114, 208, 209, 214, 268, 370, 844, 1025
BmrFI CCNGG 8 cut(s) 8, 112, 212, 457, 678, 720, 721, 829
BmsI GCATC 1 cut(s) 894
BpiI GAAGAC 1 cut(s) 356
Bpu1102I GCTNAGC 1 cut(s) 798
BpuMI CCSGG 4 cut(s) 212, 457, 720, 721
BsaAI YACGTR 2 cut(s) 258, 951
BsaHI GRCGYC 1 cut(s) 106
BsaJI CCNNGG 6 cut(s) 7, 110, 406, 439, 676, 719
BsaWI WCCGGW 4 cut(s) 17, 43, 896, 1022
BsaXI ACNNNNNCTCC 2 cut(s) 290, 320
Bsc4I CCNNNNNNNGG 6 cut(s) 98, 345, 456, 504, 530, 531
Bse118I RCCGGY 5 cut(s) 17, 37, 265, 314, 377
Bse1I ACTGG 2 cut(s) 92, 1042
BseBI CCWGG 4 cut(s) 8, 112, 678, 829
BseDI CCNNGG 6 cut(s) 7, 110, 406, 439, 676, 719
BseGI GGATG 4 cut(s) 107, 282, 347, 774
BseLI CCNNNNNNNGG 6 cut(s) 98, 345, 456, 504, 530, 531
BseMII CTCAG 5 cut(s) 44, 171, 426, 675, 789
BseNI ACTGG 2 cut(s) 92, 1042
BseRI GAGGAG 2 cut(s) 47, 68
BseSI GKGCMC 2 cut(s) 212, 677
BseX3I CGGCCG 1 cut(s) 506
BseXI GCAGC 1 cut(s) 274
Bsh1236I CGCG 4 cut(s) 89, 288, 383, 505
Bsh1285I CGRYCG 3 cut(s) 22, 427, 509
BshFI GGCC 4 cut(s) 115, 210, 269, 508
BshNI GGYRCC 2 cut(s) 893, 944
BshTI ACCGGT 1 cut(s) 17
BsiEI CGRYCG 3 cut(s) 22, 427, 509
BsiHKAI GWGCWC 2 cut(s) 51, 78
BsiHKCI CYCGRG 2 cut(s) 719, 847
BsiWI CGTACG 2 cut(s) 395, 642
BslFI GGGAC 1 cut(s) 93
BslI CCNNNNNNNGG 6 cut(s) 98, 345, 456, 504, 530, 531
BsmAI GTCTC 1 cut(s) 147
BsmFI GGGAC 1 cut(s) 93
BsmI GAATGC 1 cut(s) 1036
BsnI GGCC 4 cut(s) 115, 210, 269, 508
BsoBI CYCGRG 2 cut(s) 719, 847
Bsp120I GGGCCC 1 cut(s) 208
Bsp1286I GDGCHC 6 cut(s) 51, 78, 176, 212, 537, 677
Bsp1407I TGTACA 2 cut(s) 355, 363
Bsp143I GATC 5 cut(s) 139, 279, 477, 871, 966
Bsp1720I GCTNAGC 1 cut(s) 798
BspANI GGCC 4 cut(s) 115, 210, 269, 508
BspCNI CTCAG 5 cut(s) 43, 172, 425, 674, 790
BspFNI CGCG 4 cut(s) 89, 288, 383, 505
BspMAI CTGCAG 1 cut(s) 584
BspPI GGATC 2 cut(s) 961, 974
BspQI GCTCTTC 1 cut(s) 56
BspT107I GGYRCC 2 cut(s) 893, 944
BsrFI RCCGGY 5 cut(s) 17, 37, 265, 314, 377
BsrGI TGTACA 2 cut(s) 355, 363
BsrI ACTGG 2 cut(s) 92, 1042
BssAI RCCGGY 5 cut(s) 17, 37, 265, 314, 377
BssECI CCNNGG 6 cut(s) 7, 110, 406, 439, 676, 719
BssMI GATC 5 cut(s) 139, 279, 477, 871, 966
BssNI GRCGYC 1 cut(s) 106
BssSI CACGAG 1 cut(s) 788
Bst2BI CACGAG 1 cut(s) 788
Bst2UI CCWGG 4 cut(s) 8, 112, 678, 829
Bst6I CTCTTC 1 cut(s) 56
BstACI GRCGYC 1 cut(s) 106
BstAUI TGTACA 2 cut(s) 355, 363
BstBAI YACGTR 2 cut(s) 258, 951
BstC8I GCNNGC 3 cut(s) 267, 804, 808
BstDEI CTNAG 5 cut(s) 30, 180, 412, 661, 798
BstDSI CCRYGG 1 cut(s) 439
BstF5I GGATG 4 cut(s) 107, 282, 347, 774
BstFNI CGCG 4 cut(s) 89, 288, 383, 505
BstH2I RGCGCY 1 cut(s) 489
BstHHI GCGC 6 cut(s) 6, 91, 383, 405, 488, 689
BstKTI GATC 5 cut(s) 142, 282, 480, 874, 969
BstMAI GTCTC 1 cut(s) 147
BstMBI GATC 5 cut(s) 139, 279, 477, 871, 966
BstMCI CGRYCG 3 cut(s) 22, 427, 509
BstMWI GCNNNNNNNGC 5 cut(s) 112, 494, 511, 803, 833
BstNI CCWGG 4 cut(s) 8, 112, 678, 829
BstSCI CCNGG 8 cut(s) 6, 110, 210, 455, 676, 718, 719, 827
BstSFI CTRYAG 1 cut(s) 580
BstSLI GKGCMC 2 cut(s) 212, 677
BstUI CGCG 4 cut(s) 89, 288, 383, 505
BstV1I GCAGC 1 cut(s) 274
BstV2I GAAGAC 1 cut(s) 356
BstX2I RGATCY 1 cut(s) 966
BstYI RGATCY 1 cut(s) 966
BstZI CGGCCG 1 cut(s) 506
BsuI GTATCC 1 cut(s) 623
BsuRI GGCC 4 cut(s) 115, 210, 269, 508
BtgI CCRYGG 1 cut(s) 439
BtgZI GCGATG 1 cut(s) 46
BtrI CACGTC 1 cut(s) 562
BtsCI GGATG 4 cut(s) 107, 282, 347, 774
BtsIMutI CAGTG 2 cut(s) 99, 995
Cac8I GCNNGC 3 cut(s) 267, 804, 808
CfoI GCGC 6 cut(s) 6, 91, 383, 405, 488, 689
Cfr10I RCCGGY 5 cut(s) 17, 37, 265, 314, 377
Cfr13I GGNCC 8 cut(s) 114, 208, 209, 214, 268, 370, 844, 1025
Cfr9I CCCGGG 1 cut(s) 719
CpoI CGGWCCG 1 cut(s) 1025
CseI GACGC 1 cut(s) 95
CspAI ACCGGT 1 cut(s) 17
CspI CGGWCCG 1 cut(s) 1025
DdeI CTNAG 5 cut(s) 30, 180, 412, 661, 798
DpnI GATC 5 cut(s) 141, 281, 479, 873, 968
DpnII GATC 5 cut(s) 139, 279, 477, 871, 966
DraI TTTAAA 1 cut(s) 1011
EaeI YGGCCR 1 cut(s) 506
EagI CGGCCG 1 cut(s) 506
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
EciI GGCGGA 1 cut(s) 298
EclXI CGGCCG 1 cut(s) 506
Eco24I GRGCYC 3 cut(s) 176, 212, 537
Eco47I GGWCC 4 cut(s) 214, 370, 844, 1025
Eco52I CGGCCG 1 cut(s) 506
Eco72I CACGTG 1 cut(s) 258
Eco88I CYCGRG 2 cut(s) 719, 847
EcoO109I RGGNCCY 1 cut(s) 844
EcoRII CCWGG 4 cut(s) 6, 110, 676, 827
EcoT38I GRGCYC 3 cut(s) 176, 212, 537
FaiI YATR 9 cut(s) 204, 206, 230, 467, 691, 716, 834, 877, 959
FalI AAGNNNNNCTT 2 cut(s) 799, 831
FaqI GGGAC 1 cut(s) 93
FauI CCCGC 2 cut(s) 829, 899
FauNDI CATATG 1 cut(s) 204
FbaI TGATCA 1 cut(s) 477
Fnu4HI GCNGC 4 cut(s) 263, 312, 506, 904
FokI GGATG 4 cut(s) 114, 269, 354, 781
FriOI GRGCYC 3 cut(s) 176, 212, 537
Fsp4HI GCNGC 4 cut(s) 263, 312, 506, 904
FspAI RTGCGCAY 1 cut(s) 688
FspI TGCGCA 1 cut(s) 688
GlaI GCGC 6 cut(s) 5, 90, 382, 404, 487, 688
GluI GCNGC 4 cut(s) 263, 312, 506, 904
HaeII RGCGCY 1 cut(s) 489
HaeIII GGCC 4 cut(s) 115, 210, 269, 508
HgaI GACGC 1 cut(s) 95
HhaI GCGC 6 cut(s) 6, 91, 383, 405, 488, 689
Hin1I GRCGYC 1 cut(s) 106
Hin6I GCGC 6 cut(s) 4, 89, 381, 403, 486, 687
HinP1I GCGC 6 cut(s) 4, 89, 381, 403, 486, 687
HphI GGTGA 2 cut(s) 732, 761
Hpy166II GTNNAC 5 cut(s) 238, 366, 565, 823, 915
Hpy188I TCNGA 6 cut(s) 152, 181, 415, 556, 629, 971
Hpy188III TCNNGA 2 cut(s) 572, 842
Hpy8I GTNNAC 5 cut(s) 238, 366, 565, 823, 915
Hpy99I CGWCG 3 cut(s) 338, 629, 975
HpyCH4IV ACGT 6 cut(s) 257, 561, 567, 635, 753, 950
HpyCH4V TGCA 2 cut(s) 582, 1034
HpyF10VI GCNNNNNNNGC 5 cut(s) 112, 494, 511, 803, 833
HpyF3I CTNAG 5 cut(s) 30, 180, 412, 661, 798
HpySE526I ACGT 6 cut(s) 257, 561, 567, 635, 753, 950
Hsp92I GRCGYC 1 cut(s) 106
HspAI GCGC 6 cut(s) 4, 89, 381, 403, 486, 687
KpnI GGTACC 1 cut(s) 897
KroI GCCGGC 1 cut(s) 265
KroNI GCCGGC 1 cut(s) 267
Ksp22I TGATCA 1 cut(s) 477
Kzo9I GATC 5 cut(s) 139, 279, 477, 871, 966
LguI GCTCTTC 1 cut(s) 56
LmnI GCTCC 3 cut(s) 46, 81, 999
Lsp1109I GCAGC 1 cut(s) 274
LweI GCATC 1 cut(s) 894
MaeII ACGT 6 cut(s) 257, 561, 567, 635, 753, 950
MaeIII GTNAC 3 cut(s) 490, 738, 749
MalI GATC 5 cut(s) 141, 281, 479, 873, 968
MboI GATC 5 cut(s) 139, 279, 477, 871, 966
MboII GAAGA 4 cut(s) 43, 286, 289, 361
MflI RGATCY 1 cut(s) 966
MhlI GDGCHC 6 cut(s) 51, 78, 176, 212, 537, 677
MluCI AATT 2 cut(s) 164, 1012
MmeI TCCRAC 5 cut(s) 153, 169, 607, 909, 994
MroNI GCCGGC 1 cut(s) 265
MseI TTAA 3 cut(s) 123, 734, 1010
MslI CAYNNNNRTG 1 cut(s) 942
MspA1I CMGCKG 2 cut(s) 361, 925
MspR9I CCNGG 8 cut(s) 8, 112, 212, 457, 678, 720, 721, 829
Mva1269I GAATGC 1 cut(s) 1036
MvaI CCWGG 4 cut(s) 8, 112, 678, 829
MvnI CGCG 4 cut(s) 89, 288, 383, 505
MwoI GCNNNNNNNGC 5 cut(s) 112, 494, 511, 803, 833
NaeI GCCGGC 1 cut(s) 267
NciI CCSGG 4 cut(s) 212, 457, 720, 721
NdeI CATATG 1 cut(s) 204
NdeII GATC 5 cut(s) 139, 279, 477, 871, 966
NgoMIV GCCGGC 1 cut(s) 265
NmeAIII GCCGAG 1 cut(s) 387
NmuCI GTSAC 3 cut(s) 490, 738, 749
NsbI TGCGCA 1 cut(s) 688
OliI CACNNNNGTG 1 cut(s) 942
PciSI GCTCTTC 1 cut(s) 56
PcsI WCGNNNNNNNCGW 2 cut(s) 69, 705
PctI GAATGC 1 cut(s) 1036
PdiI GCCGGC 1 cut(s) 267
Pfl23II CGTACG 2 cut(s) 395, 642
PflMI CCANNNNNTGG 1 cut(s) 98
PinAI ACCGGT 1 cut(s) 17
PkrI GCNGC 4 cut(s) 264, 313, 507, 905
PmaCI CACGTG 1 cut(s) 258
PmlI CACGTG 1 cut(s) 258
Ppu21I YACGTR 2 cut(s) 258, 951
PpuMI RGGWCCY 1 cut(s) 844
Psp5II RGGWCCY 1 cut(s) 844
Psp6I CCWGG 4 cut(s) 6, 110, 676, 827
PspCI CACGTG 1 cut(s) 258
PspGI CCWGG 4 cut(s) 6, 110, 676, 827
PspLI CGTACG 2 cut(s) 395, 642
PspOMI GGGCCC 1 cut(s) 208
PspPI GGNCC 8 cut(s) 114, 208, 209, 214, 268, 370, 844, 1025
PspPPI RGGWCCY 1 cut(s) 844
PstI CTGCAG 1 cut(s) 584
PsuI RGATCY 1 cut(s) 966
PvuII CAGCTG 2 cut(s) 361, 925
RseI CAYNNNNRTG 1 cut(s) 942
Rsr2I CGGWCCG 1 cut(s) 1025
RsrII CGGWCCG 1 cut(s) 1025
SapI GCTCTTC 1 cut(s) 56
SaqAI TTAA 3 cut(s) 123, 734, 1010
SatI GCNGC 4 cut(s) 263, 312, 506, 904
Sau3AI GATC 5 cut(s) 139, 279, 477, 871, 966
Sau96I GGNCC 8 cut(s) 114, 208, 209, 214, 268, 370, 844, 1025
ScrFI CCNGG 8 cut(s) 8, 112, 212, 457, 678, 720, 721, 829
SduI GDGCHC 6 cut(s) 51, 78, 176, 212, 537, 677
SfaNI GCATC 1 cut(s) 894
SfcI CTRYAG 1 cut(s) 580
SinI GGWCC 4 cut(s) 214, 370, 844, 1025
SmaI CCCGGG 1 cut(s) 721
SmiMI CAYNNNNRTG 1 cut(s) 942
Sse9I AATT 2 cut(s) 164, 1012
StyD4I CCNGG 8 cut(s) 6, 110, 210, 455, 676, 718, 719, 827
TaiI ACGT 6 cut(s) 260, 564, 570, 638, 756, 953
TaqI TCGA 1 cut(s) 168
TaqII GACCGA 1 cut(s) 1042
TasI AATT 2 cut(s) 164, 1012
TatI WGTACW 2 cut(s) 355, 363
TauI GCSGC 3 cut(s) 314, 508, 906
Tru1I TTAA 3 cut(s) 123, 734, 1010
Tru9I TTAA 3 cut(s) 123, 734, 1010
TscAI CASTG 2 cut(s) 99, 995
TseFI GTSAC 3 cut(s) 490, 738, 749
TseI GCWGC 1 cut(s) 262
Tsp45I GTSAC 3 cut(s) 490, 738, 749
TspDTI ATGAA 2 cut(s) 283, 974
TspGWI ACGGA 3 cut(s) 322, 383, 988
TspMI CCCGGG 1 cut(s) 719
TspRI CASTG 2 cut(s) 99, 995
Van91I CCANNNNNTGG 1 cut(s) 98
VpaK11BI GGWCC 4 cut(s) 214, 370, 844, 1025
XapI RAATTY 1 cut(s) 164
XcmI CCANNNNNNNNNTGG 1 cut(s) 99
XmaI CCCGGG 1 cut(s) 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.