Prupe.3G003300_v2.0.a1

BEST Arabidopsis thaliana protein match is

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
226632 .. 229917
3286 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G003300.1

Sequence Viewer

Length: 1473 bp
ATGAAGAAGAATCAGATGGTGCACGTGTCATTGTTCTTAGCACATGTGCTTCTTCTGATCAGTCTTCATGGTGCCTCTGGGAAAGATTATATCTCTGCTGTGGGAGACCCAGGAATGAGAAGAGATGAACTGAGAGTGGCCTTGGAAGCTTGGAACTTCTGCAATGAAGTTGGAGCAGAAGCACCTGGCATGGGCAGCCCAAGAGCTGCTGATTGCTTTAATCTCACAAGTTCTTCTCTAAGACATGGAGTGAGCGAAGATGATAACAAACTTGGGGTGGGCACACCATTCCCAGGGATTAGCCAGGGGGCTTTGAACAATGTAGACCTTTATGCAGCAGAGAAGGAGCTGTATCTGGGTTCTTTATGTCAAGTTTCAGACTCTCCAAAACCATGGCAATTTTGGATGGTTATGCTGAAAAATGGTAACTTTGACACAAAGTCTGGTTTGTGCCCTGCAAATGGGAAAAAGGCAGCTCCTTTCAGTCCGGGAAAGTTTCCTTGCTTTGGGAGTGGGTGTATGAATCAACCCATTGTGAATCACCAAGAGACAGAGTTGCTGGATGGTGATAAAATGAGAGGAAGTTTCAGTGGGTCCTATGATCTGGGATCTGATCTCAGTAATGGAAATGGTGGAGCTGATGGGATATCTTTCTATGAGGTGGTTTGGCAGAAGAAACTTGGTGTTGGAAGTTGGGTTTTCAGTCACAAGCTCAAGACTTCAAAGAAATATCCATGGCTGATGCTGTACCTCAGAGCTGATGCAACCCAAGGATATTCTGGAGGCTATCACTATGATACAAGAGGAATGCTCAAAACACTTCCAGAGTCACCAAATTTTAAGGTGAGGTTGACTTTGGACATCAAACAAGGGGGAGGACCCAAGAGCCAGTTTTACCTTATTGATATTGGTAGCTGTTGGAAGAACAATGGCCAACCCTGTAACGGGGACGTGCTGACTGACGTAACCAGATACACGGAGATGATCATAAATCCGGAAACTCCAGCTTGGTGCAGCCCCACAGGTTTAGGGAATTGCCCACCATACCATATTACACCAGATGACAGAAAGATTTATAGAAATGACACAGCTAACTTCCCATACTCAGCTTATCACTACTACTGTGCTCCAGGGAATGCCAAACATTTAGAGCAACCTGTAAGCACATGTGACCCTTACAGCAATCCTCAGGCACAAGAGATAATGCAATTGCTGCCTCACCCCATATGGGCTGAGTATGGCTATCCAACCAAACAAGGGCAGGGTTGGGTTGGAGATGCAAGAACTTGGGAGCTTGATGTTGGTGCCCTATCCAGTAGACTCTACTTCTATCAGGATCCAGGCACCACTCCTGCAAGAAGGATATGGGGATCAGTGGATGTGGGTACAGAAATTTTTGTTAGTGACAAAGATGAAGTGGCAGAGTGGACTCTCAGTGACTTCGACGTGATTTTTACACCCAAGAAGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

491

Amino Acids

54.15

Weight (kDa)

5.81

Isoelectric Point (pI)

31.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 71, 1304, 1343
AccI GTMKAC 2 cut(s) 324, 1318
AccIII TCCGGA 1 cut(s) 994
AclWI GGATC 4 cut(s) 616, 1331, 1344, 1378
AcoI YGGCCR 1 cut(s) 931
AcsI RAATTY 2 cut(s) 835, 1392
AcvI CACGTG 1 cut(s) 25
AfaI GTAC 2 cut(s) 749, 1387
AfiI CCNNNNNNNGG 8 cut(s) 191, 293, 461, 506, 944, 945, 1228, 1257
AflIII ACRYGT 3 cut(s) 24, 43, 1166
AgsI TTSAA 2 cut(s) 316, 723
AhdI GACNNNNNGTC 1 cut(s) 439
AjiI CACGTC 2 cut(s) 952, 1447
AjnI CCWGG 6 cut(s) 109, 184, 292, 303, 1129, 1339
Alw21I GWGCWC 2 cut(s) 24, 1129
Alw26I GTCTC 2 cut(s) 99, 542
Alw44I GTGCAC 1 cut(s) 20
AlwI GGATC 4 cut(s) 616, 1331, 1344, 1378
Aor13HI TCCGGA 1 cut(s) 994
AoxI GGCC 2 cut(s) 138, 931
ApaLI GTGCAC 1 cut(s) 20
ApeKI GCWGC 6 cut(s) 195, 206, 335, 473, 1014, 1213
ApoI RAATTY 2 cut(s) 835, 1392
AspS9I GGNCC 2 cut(s) 594, 878
AsuC2I CCSGG 1 cut(s) 489
AsuHPI GGTGA 5 cut(s) 533, 578, 822, 856, 1211
AvaII GGWCC 2 cut(s) 594, 878
AxyI CCTNAGG 1 cut(s) 1188
BaeGI GKGCMC 4 cut(s) 24, 284, 455, 1309
BalI TGGCCA 1 cut(s) 933
BamHI GGATCC 1 cut(s) 1336
BanI GGYRCC 3 cut(s) 71, 1304, 1343
BbrPI CACGTG 1 cut(s) 25
BbsI GAAGAC 1 cut(s) 56
Bbv12I GWGCWC 2 cut(s) 24, 1129
BbvI GCAGC 6 cut(s) 193, 207, 347, 485, 1026, 1200
BccI CCATC 4 cut(s) 10, 400, 557, 635
BciT130I CCWGG 6 cut(s) 111, 186, 294, 305, 1131, 1341
BclI TGATCA 2 cut(s) 57, 984
BcnI CCSGG 1 cut(s) 489
BcoDI GTCTC 2 cut(s) 99, 542
BisI GCNGC 6 cut(s) 196, 207, 336, 474, 1015, 1214
BlsI GCNGC 6 cut(s) 197, 208, 337, 475, 1016, 1215
Bme1390I CCNGG 7 cut(s) 111, 186, 294, 305, 489, 1131, 1341
Bme18I GGWCC 2 cut(s) 594, 878
BmeRI GACNNNNNGTC 1 cut(s) 439
BmgBI CACGTC 2 cut(s) 952, 1447
BmgT120I GGNCC 2 cut(s) 594, 878
BmiI GGNNCC 6 cut(s) 73, 595, 880, 1306, 1338, 1345
BmrFI CCNGG 7 cut(s) 111, 186, 294, 305, 489, 1131, 1341
BmsI GCATC 3 cut(s) 732, 751, 1267
BpiI GAAGAC 1 cut(s) 56
BplI GAGNNNNNCTC 2 cut(s) 795, 827
BpmI CTGGAG 3 cut(s) 801, 987, 1113
BpuEI CTTGAG 1 cut(s) 698
BpuMI CCSGG 1 cut(s) 489
BsaAI YACGTR 1 cut(s) 25
BsaI GGTCTC 1 cut(s) 99
BsaJI CCNNGG 9 cut(s) 109, 141, 292, 293, 304, 392, 734, 769, 1130
BsaWI WCCGGW 1 cut(s) 994
BsaXI ACNNNNNCTCC 2 cut(s) 502, 532
Bsc4I CCNNNNNNNGG 8 cut(s) 191, 293, 461, 506, 944, 945, 1228, 1257
Bse1I ACTGG 2 cut(s) 889, 1314
Bse21I CCTNAGG 1 cut(s) 1188
Bse3DI GCAATG 1 cut(s) 169
BseAI TCCGGA 1 cut(s) 994
BseBI CCWGG 6 cut(s) 111, 186, 294, 305, 1131, 1341
BseDI CCNNGG 9 cut(s) 109, 141, 292, 293, 304, 392, 734, 769, 1130
BseGI GGATG 3 cut(s) 411, 568, 1384
BseLI CCNNNNNNNGG 8 cut(s) 191, 293, 461, 506, 944, 945, 1228, 1257
BseMI GCAATG 1 cut(s) 169
BseMII CTCAG 7 cut(s) 122, 631, 766, 1119, 1202, 1224, 1447
BseNI ACTGG 2 cut(s) 889, 1314
BseSI GKGCMC 4 cut(s) 24, 284, 455, 1309
BseXI GCAGC 6 cut(s) 193, 207, 347, 485, 1026, 1200
BsgI GTGCAG 1 cut(s) 1033
BshFI GGCC 2 cut(s) 140, 933
BshNI GGYRCC 3 cut(s) 71, 1304, 1343
BsiHKAI GWGCWC 2 cut(s) 24, 1129
BsiSI CCGG 2 cut(s) 488, 995
BslFI GGGAC 1 cut(s) 962
BslI CCNNNNNNNGG 8 cut(s) 191, 293, 461, 506, 944, 945, 1228, 1257
BsmAI GTCTC 2 cut(s) 99, 542
BsmFI GGGAC 1 cut(s) 962
BsmI GAATGC 2 cut(s) 813, 1141
BsnI GGCC 2 cut(s) 140, 933
Bso31I GGTCTC 1 cut(s) 99
Bsp1286I GDGCHC 5 cut(s) 24, 284, 455, 1129, 1309
Bsp13I TCCGGA 1 cut(s) 994
Bsp143I GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
Bsp19I CCATGG 2 cut(s) 392, 734
BspANI GGCC 2 cut(s) 140, 933
BspCNI CTCAG 7 cut(s) 123, 630, 765, 1118, 1201, 1225, 1446
BspEI TCCGGA 1 cut(s) 994
BspLI GGNNCC 6 cut(s) 73, 595, 880, 1306, 1338, 1345
BspPI GGATC 4 cut(s) 616, 1331, 1344, 1378
BspT107I GGYRCC 3 cut(s) 71, 1304, 1343
BspTNI GGTCTC 1 cut(s) 99
BsrDI GCAATG 1 cut(s) 169
BsrI ACTGG 2 cut(s) 889, 1314
BssECI CCNNGG 9 cut(s) 109, 141, 292, 293, 304, 392, 734, 769, 1130
BssMI GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
BssT1I CCWWGG 4 cut(s) 141, 392, 734, 769
Bst2UI CCWGG 6 cut(s) 111, 186, 294, 305, 1131, 1341
Bst4CI ACNGT 1 cut(s) 1124
Bst6I CTCTTC 1 cut(s) 115
BstAPI GCANNNNNTGC 1 cut(s) 1213
BstBAI YACGTR 1 cut(s) 25
BstDEI CTNAG 9 cut(s) 37, 131, 239, 617, 752, 1105, 1188, 1233, 1433
BstDSI CCRYGG 2 cut(s) 392, 734
BstF5I GGATG 3 cut(s) 411, 568, 1384
BstKTI GATC 7 cut(s) 60, 604, 611, 616, 987, 1339, 1373
BstMAI GTCTC 2 cut(s) 99, 542
BstMBI GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
BstMWI GCNNNNNNNGC 3 cut(s) 146, 195, 1213
BstNI CCWGG 6 cut(s) 111, 186, 294, 305, 1131, 1341
BstNSI RCATGY 2 cut(s) 47, 1170
BstSCI CCNGG 7 cut(s) 109, 184, 292, 303, 487, 1129, 1339
BstSLI GKGCMC 4 cut(s) 24, 284, 455, 1309
BstV1I GCAGC 6 cut(s) 193, 207, 347, 485, 1026, 1200
BstV2I GAAGAC 1 cut(s) 56
BstX2I RGATCY 2 cut(s) 608, 1336
BstXI CCANNNNNNTGG 1 cut(s) 393
BstYI RGATCY 2 cut(s) 608, 1336
Bsu36I CCTNAGG 1 cut(s) 1188
BsuRI GGCC 2 cut(s) 140, 933
BtgI CCRYGG 2 cut(s) 392, 734
BtrI CACGTC 2 cut(s) 952, 1447
BtsCI GGATG 3 cut(s) 411, 568, 1384
BtsIMutI CAGTG 3 cut(s) 595, 1380, 1441
Cfr13I GGNCC 2 cut(s) 594, 878
Csp6I GTAC 2 cut(s) 748, 1386
CviAII CATG 7 cut(s) 44, 68, 190, 245, 393, 735, 1167
CviQI GTAC 2 cut(s) 748, 1386
DdeI CTNAG 9 cut(s) 37, 131, 239, 617, 752, 1105, 1188, 1233, 1433
DpnI GATC 7 cut(s) 59, 603, 610, 615, 986, 1338, 1372
DpnII GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
DriI GACNNNNNGTC 1 cut(s) 439
EaeI YGGCCR 1 cut(s) 931
Eam1104I CTCTTC 1 cut(s) 115
Eam1105I GACNNNNNGTC 1 cut(s) 439
EarI CTCTTC 1 cut(s) 115
Eco130I CCWWGG 4 cut(s) 141, 392, 734, 769
Eco31I GGTCTC 1 cut(s) 99
Eco32I GATATC 1 cut(s) 648
Eco47I GGWCC 2 cut(s) 594, 878
Eco72I CACGTG 1 cut(s) 25
Eco81I CCTNAGG 1 cut(s) 1188
EcoO109I RGGNCCY 2 cut(s) 594, 878
EcoRII CCWGG 6 cut(s) 109, 184, 292, 303, 1129, 1339
EcoRV GATATC 1 cut(s) 648
EcoT14I CCWWGG 4 cut(s) 141, 392, 734, 769
ErhI CCWWGG 4 cut(s) 141, 392, 734, 769
FaeI CATG 7 cut(s) 47, 71, 193, 248, 396, 738, 1170
FaqI GGGAC 1 cut(s) 962
FatI CATG 7 cut(s) 43, 67, 189, 244, 392, 734, 1166
FauNDI CATATG 1 cut(s) 1226
FbaI TGATCA 2 cut(s) 57, 984
FblI GTMKAC 2 cut(s) 324, 1318
Fnu4HI GCNGC 6 cut(s) 196, 207, 336, 474, 1015, 1214
FokI GGATG 3 cut(s) 418, 575, 1391
Fsp4HI GCNGC 6 cut(s) 196, 207, 336, 474, 1015, 1214
GluI GCNGC 6 cut(s) 196, 207, 336, 474, 1015, 1214
GsuI CTGGAG 3 cut(s) 801, 987, 1113
HaeIII GGCC 2 cut(s) 140, 933
HapII CCGG 2 cut(s) 488, 995
Hin1II CATG 7 cut(s) 47, 71, 193, 248, 396, 738, 1170
HincII GTYRAC 1 cut(s) 852
HindII GTYRAC 1 cut(s) 852
HindIII AAGCTT 1 cut(s) 147
HinfI GANTC 7 cut(s) 10, 380, 523, 538, 827, 1320, 1429
HpaII CCGG 2 cut(s) 488, 995
HphI GGTGA 5 cut(s) 533, 578, 822, 856, 1211
Hpy166II GTNNAC 5 cut(s) 22, 325, 852, 1319, 1428
Hpy188I TCNGA 5 cut(s) 15, 57, 379, 613, 755
Hpy188III TCNNGA 5 cut(s) 715, 780, 824, 995, 1334
Hpy8I GTNNAC 5 cut(s) 22, 325, 852, 1319, 1428
Hpy99I CGWCG 1 cut(s) 1448
HpyAV CCTTC 3 cut(s) 337, 1353, 1459
HpyCH4III ACNGT 1 cut(s) 1124
HpyCH4IV ACGT 4 cut(s) 24, 951, 963, 1446
HpyCH4V TGCA 9 cut(s) 22, 162, 335, 458, 764, 1014, 1207, 1280, 1355
HpyF10VI GCNNNNNNNGC 3 cut(s) 146, 195, 1213
HpyF3I CTNAG 9 cut(s) 37, 131, 239, 617, 752, 1105, 1188, 1233, 1433
HpySE526I ACGT 4 cut(s) 24, 951, 963, 1446
Hsp92II CATG 7 cut(s) 47, 71, 193, 248, 396, 738, 1170
Kpn2I TCCGGA 1 cut(s) 994
Ksp22I TGATCA 2 cut(s) 57, 984
Kzo9I GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
LmnI GCTCC 6 cut(s) 173, 346, 481, 635, 1132, 1291
Lsp1109I GCAGC 6 cut(s) 193, 207, 347, 485, 1026, 1200
LweI GCATC 3 cut(s) 732, 751, 1267
MaeII ACGT 4 cut(s) 24, 951, 963, 1446
MaeIII GTNAC 8 cut(s) 425, 704, 828, 941, 964, 1169, 1403, 1436
MalI GATC 7 cut(s) 59, 603, 610, 615, 986, 1338, 1372
MboI GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
MboII GAAGA 9 cut(s) 16, 19, 44, 56, 132, 225, 269, 685, 934
MfeI CAATTG 1 cut(s) 1208
MflI RGATCY 2 cut(s) 608, 1336
MhlI GDGCHC 5 cut(s) 24, 284, 455, 1129, 1309
MlsI TGGCCA 1 cut(s) 933
MluCI AATT 5 cut(s) 398, 835, 1033, 1208, 1392
MluNI TGGCCA 1 cut(s) 933
MlyI GAGTC 4 cut(s) 374, 836, 1314, 1423
MmeI TCCRAC 5 cut(s) 151, 667, 899, 1252, 1271
Mox20I TGGCCA 1 cut(s) 933
MroI TCCGGA 1 cut(s) 994
MscI TGGCCA 1 cut(s) 933
MseI TTAA 2 cut(s) 219, 840
MslI CAYNNNNRTG 1 cut(s) 980
Msp20I TGGCCA 1 cut(s) 933
MspI CCGG 2 cut(s) 488, 995
MspR9I CCNGG 7 cut(s) 111, 186, 294, 305, 489, 1131, 1341
MunI CAATTG 1 cut(s) 1208
Mva1269I GAATGC 2 cut(s) 813, 1141
MvaI CCWGG 6 cut(s) 111, 186, 294, 305, 1131, 1341
MwoI GCNNNNNNNGC 3 cut(s) 146, 195, 1213
NciI CCSGG 1 cut(s) 489
NcoI CCATGG 2 cut(s) 392, 734
NdeI CATATG 1 cut(s) 1226
NdeII GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
NlaIII CATG 7 cut(s) 47, 71, 193, 248, 396, 738, 1170
NlaIV GGNNCC 6 cut(s) 73, 595, 880, 1306, 1338, 1345
NmuCI GTSAC 5 cut(s) 704, 828, 1169, 1403, 1436
NspI RCATGY 2 cut(s) 47, 1170
PasI CCCWGGG 1 cut(s) 293
PciI ACATGT 2 cut(s) 43, 1166
PctI GAATGC 2 cut(s) 813, 1141
PfeI GAWTC 3 cut(s) 10, 523, 538
PfoI TCCNGGA 1 cut(s) 487
PkrI GCNGC 6 cut(s) 197, 208, 337, 475, 1016, 1215
PleI GAGTC 4 cut(s) 374, 835, 1314, 1423
PmaCI CACGTG 1 cut(s) 25
PmlI CACGTG 1 cut(s) 25
PpsI GAGTC 4 cut(s) 374, 835, 1314, 1423
Ppu21I YACGTR 1 cut(s) 25
PpuMI RGGWCCY 2 cut(s) 594, 878
PscI ACATGT 2 cut(s) 43, 1166
Psp5II RGGWCCY 2 cut(s) 594, 878
Psp6I CCWGG 6 cut(s) 109, 184, 292, 303, 1129, 1339
PspCI CACGTG 1 cut(s) 25
PspGI CCWGG 6 cut(s) 109, 184, 292, 303, 1129, 1339
PspN4I GGNNCC 6 cut(s) 73, 595, 880, 1306, 1338, 1345
PspPI GGNCC 2 cut(s) 594, 878
PspPPI RGGWCCY 2 cut(s) 594, 878
PsuI RGATCY 2 cut(s) 608, 1336
RsaI GTAC 2 cut(s) 749, 1387
RsaNI GTAC 2 cut(s) 748, 1386
RseI CAYNNNNRTG 1 cut(s) 980
SaqAI TTAA 2 cut(s) 219, 840
SatI GCNGC 6 cut(s) 196, 207, 336, 474, 1015, 1214
Sau3AI GATC 7 cut(s) 57, 601, 608, 613, 984, 1336, 1370
Sau96I GGNCC 2 cut(s) 594, 878
SchI GAGTC 4 cut(s) 374, 836, 1314, 1423
ScrFI CCNGG 7 cut(s) 111, 186, 294, 305, 489, 1131, 1341
SduI GDGCHC 5 cut(s) 24, 284, 455, 1129, 1309
SfaNI GCATC 3 cut(s) 732, 751, 1267
SinI GGWCC 2 cut(s) 594, 878
SmiMI CAYNNNNRTG 1 cut(s) 980
SmlI CTYRAG 1 cut(s) 713
SmoI CTYRAG 1 cut(s) 713
Sse9I AATT 5 cut(s) 398, 835, 1033, 1208, 1392
StyD4I CCNGG 7 cut(s) 109, 184, 292, 303, 487, 1129, 1339
StyI CCWWGG 4 cut(s) 141, 392, 734, 769
TaaI ACNGT 1 cut(s) 1124
TaiI ACGT 4 cut(s) 27, 954, 966, 1449
TaqI TCGA 1 cut(s) 1443
TasI AATT 5 cut(s) 398, 835, 1033, 1208, 1392
TfiI GAWTC 3 cut(s) 10, 523, 538
Tru1I TTAA 2 cut(s) 219, 840
Tru9I TTAA 2 cut(s) 219, 840
TscAI CASTG 3 cut(s) 595, 1380, 1441
TseFI GTSAC 5 cut(s) 704, 828, 1169, 1403, 1436
TseI GCWGC 6 cut(s) 195, 206, 335, 473, 1014, 1213
Tsp45I GTSAC 5 cut(s) 704, 828, 1169, 1403, 1436
TspDTI ATGAA 6 cut(s) 17, 56, 141, 180, 536, 1428
TspGWI ACGGA 1 cut(s) 992
TspRI CASTG 3 cut(s) 595, 1380, 1441
VneI GTGCAC 1 cut(s) 20
VpaK11BI GGWCC 2 cut(s) 594, 878
XapI RAATTY 2 cut(s) 835, 1392
XceI RCATGY 2 cut(s) 47, 1170
XcmI CCANNNNNNNNNTGG 2 cut(s) 399, 776
XmiI GTMKAC 2 cut(s) 324, 1318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.