Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g21311 |
| prunus_persica | Prupe.3G010000_v2.0.a1 Prupe.4G174500_v2.0.a1 Prupe.6G123500_v2.0.a1 |
| pyrus_communis | pycom10g09650 |
| rosa_rugosa | Rorug02G0245200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 120 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 83 |
| AgsI | TTSAA | 1 cut(s) | 17 |
| AluBI | AGCT | 2 cut(s) | 99, 170 |
| AluI | AGCT | 2 cut(s) | 99, 170 |
| Alw26I | GTCTC | 1 cut(s) | 100 |
| AoxI | GGCC | 1 cut(s) | 245 |
| ApeKI | GCWGC | 2 cut(s) | 99, 182 |
| ApoI | RAATTY | 1 cut(s) | 120 |
| AsuHPI | GGTGA | 1 cut(s) | 131 |
| BbvI | GCAGC | 2 cut(s) | 86, 169 |
| BceAI | ACGGC | 1 cut(s) | 20 |
| BcoDI | GTCTC | 1 cut(s) | 100 |
| BfmI | CTRYAG | 2 cut(s) | 148, 165 |
| BisI | GCNGC | 2 cut(s) | 100, 183 |
| BlsI | GCNGC | 2 cut(s) | 101, 184 |
| BmiI | GGNNCC | 1 cut(s) | 191 |
| Bpu10I | CCTNAGC | 1 cut(s) | 242 |
| BpuEI | CTTGAG | 2 cut(s) | 70, 242 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 83 |
| BseGI | GGATG | 2 cut(s) | 73, 265 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 83 |
| BseMII | CTCAG | 1 cut(s) | 104 |
| BseXI | GCAGC | 2 cut(s) | 86, 169 |
| BshFI | GGCC | 1 cut(s) | 247 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 83 |
| BsmAI | GTCTC | 1 cut(s) | 100 |
| BsnI | GGCC | 1 cut(s) | 247 |
| Bsp143I | GATC | 2 cut(s) | 58, 202 |
| BspANI | GGCC | 1 cut(s) | 247 |
| BspCNI | CTCAG | 1 cut(s) | 105 |
| BspLI | GGNNCC | 1 cut(s) | 191 |
| BssMI | GATC | 2 cut(s) | 58, 202 |
| BstDEI | CTNAG | 3 cut(s) | 113, 242, 279 |
| BstF5I | GGATG | 2 cut(s) | 73, 265 |
| BstKTI | GATC | 2 cut(s) | 61, 205 |
| BstMAI | GTCTC | 1 cut(s) | 100 |
| BstMBI | GATC | 2 cut(s) | 58, 202 |
| BstSFI | CTRYAG | 2 cut(s) | 148, 165 |
| BstV1I | GCAGC | 2 cut(s) | 86, 169 |
| BsuRI | GGCC | 1 cut(s) | 247 |
| BtsCI | GGATG | 2 cut(s) | 73, 265 |
| CviJI | RGCY | 8 cut(s) | 83, 99, 117, 170, 182, 192, 241, 247 |
| CviKI_1 | RGCY | 8 cut(s) | 83, 99, 117, 170, 182, 192, 241, 247 |
| DdeI | CTNAG | 3 cut(s) | 113, 242, 279 |
| DpnI | GATC | 2 cut(s) | 60, 204 |
| DpnII | GATC | 2 cut(s) | 58, 202 |
| Eco147I | AGGCCT | 1 cut(s) | 247 |
| FaiI | YATR | 1 cut(s) | 80 |
| Fnu4HI | GCNGC | 2 cut(s) | 100, 183 |
| FokI | GGATG | 2 cut(s) | 60, 272 |
| Fsp4HI | GCNGC | 2 cut(s) | 100, 183 |
| GluI | GCNGC | 2 cut(s) | 100, 183 |
| HaeIII | GGCC | 1 cut(s) | 247 |
| HinfI | GANTC | 2 cut(s) | 23, 263 |
| HphI | GGTGA | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 114, 234 |
| Hpy188III | TCNNGA | 2 cut(s) | 49, 221 |
| Hpy8I | GTNNAC | 1 cut(s) | 94 |
| HpyCH4V | TGCA | 1 cut(s) | 102 |
| HpyF3I | CTNAG | 3 cut(s) | 113, 242, 279 |
| Kzo9I | GATC | 2 cut(s) | 58, 202 |
| LmnI | GCTCC | 1 cut(s) | 189 |
| LpnPI | CCDG | 3 cut(s) | 69, 191, 199 |
| Lsp1109I | GCAGC | 2 cut(s) | 86, 169 |
| MaeIII | GTNAC | 1 cut(s) | 274 |
| MalI | GATC | 2 cut(s) | 60, 204 |
| MboI | GATC | 2 cut(s) | 58, 202 |
| MboII | GAAGA | 1 cut(s) | 128 |
| MluCI | AATT | 1 cut(s) | 120 |
| MlyI | GAGTC | 1 cut(s) | 257 |
| MmeI | TCCRAC | 1 cut(s) | 257 |
| MnlI | CCTC | 2 cut(s) | 217, 258 |
| MseI | TTAA | 1 cut(s) | 39 |
| MspA1I | CMGCKG | 1 cut(s) | 99 |
| NdeII | GATC | 2 cut(s) | 58, 202 |
| NlaIV | GGNNCC | 1 cut(s) | 191 |
| PceI | AGGCCT | 1 cut(s) | 247 |
| PfeI | GAWTC | 1 cut(s) | 23 |
| PkrI | GCNGC | 2 cut(s) | 101, 184 |
| PleI | GAGTC | 1 cut(s) | 257 |
| PpsI | GAGTC | 1 cut(s) | 257 |
| PspN4I | GGNNCC | 1 cut(s) | 191 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 280 |
| PvuII | CAGCTG | 1 cut(s) | 99 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| SatI | GCNGC | 2 cut(s) | 100, 183 |
| Sau3AI | GATC | 2 cut(s) | 58, 202 |
| SchI | GAGTC | 1 cut(s) | 257 |
| SetI | ASST | 2 cut(s) | 101, 172 |
| SfcI | CTRYAG | 2 cut(s) | 148, 165 |
| SmlI | CTYRAG | 2 cut(s) | 49, 221 |
| SmoI | CTYRAG | 2 cut(s) | 49, 221 |
| Sse9I | AATT | 1 cut(s) | 120 |
| SseBI | AGGCCT | 1 cut(s) | 247 |
| SspI | AATATT | 1 cut(s) | 67 |
| StuI | AGGCCT | 1 cut(s) | 247 |
| TasI | AATT | 1 cut(s) | 120 |
| TfiI | GAWTC | 1 cut(s) | 23 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TseI | GCWGC | 2 cut(s) | 99, 182 |
| XapI | RAATTY | 1 cut(s) | 120 |