Prupe.3G035400_v2.0.a1

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
2573217 .. 2575613
2397 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G035400.1

Sequence Viewer

Length: 1509 bp
ATGAACAACAAACCAAGCTCAGCCACACCACCATCATCAAAGCCCACATGGGTCCTGCCCTACAAGACCCAAAACCTCACTGACCTCTACACTTTGGGCAGGGTACTTGGCCAGGGTCAGTTTGGCACCACCTACCTCTGCACTGAAAGCTCCACAGGCCACCAATATGCCTGCAAATCCATCCCAAAGCGTAAGCTTCTTTGCATAGAGGACTATGAAGATGTGTGGAGGGAGATTCAGATGATGCACCACCTCTCTGAGCACCCCCATGTGGTGAGGATCAGAGGCACCTATGAGGACTCAGTTTCTGTGCACTTGGTGATGGAGCTGTGCAAAGGAGGAGAGCTTTTTGATAGGATTGTGAAGAAGGGTCATTACAGTGAGAGAGAGGCTGCAAAGCTCTTGAAGACCATTGTTGGGGTTGTGGAGACTTGCCATTCACTTGGGGTTATGCATAGAGATCTAAAGCCTGAGAATTTCTTGTTTGATAGTGAGGAGGAAGATGCTGCTCTTAAAGCCACAGACTTTGGCCTCTCTGTTTTCTATAAGCCAGGTGAGACCTTTTCTGATGTTGTTGGTAGTCCGTATTATGTTGCCCCTGAGGTGCTGAGAAAGCATTATGGACCAGAATCAGATGTGTGGAGTGCTGGAGTGATTTTGTACATTTTGTTAAGTGGGGTCCCTCCCTTTTGGGCTGAAACTGAGATTGGGATTTTTAGGCAGATTTTGCAAGCAAGATTGGATTTTGAATCTGAACCATGGCCTAGGATTTCAGAAAGTGCTAAGGATCTGCTTAGGAAAATGCTTGAAAGAAACCCAAAGAAAAGGGTAACTGCCCATGAGGTTCTTTGCCATCCATGGATCATAGATGACACCATGGCTCCAGATAAGCCTCTTGATTCTGCAGTGCTTTCTAGGCTGAAGCAGTTCTCAGCCATGAACAAGCTCAAGAAGATGGCTTTAAGGGTCATAGCTGAGAGGCTGTCTGAGGAAGAGATTGGTGGGTTGAAAGAGCTGTTCAAGATGATTGATGCAGATGACAGTGGAAGCATCACATTTGATGAACTCAAAGAGGGCTTGAGGAAAGTGGGATCTGAGCTTATGGAGTCTGAGATTAAGGATCTTATGGAGGCAGCTGACATTGACAACAGTGGAACAATTGACTATGGTGAGTTTCTTGCAGCCACAGTGCACTTAAACAAGTTGGAGAGGGAAGAGAATTTGTTATCAGCCTTCTCCTTTTTTGACAAAGATGGTAGTGGTTTCATAACCATTGATGAGCTCAGGCAAGCCTGCAGGGAGTTTGGATTAGGCGAGCTCCATCTTGAGGACATGATCAAAGAAATTGATCAAGACAATGATGGGCAGATAGATTATGGAGAGTTTGCTGCAATGATGAGGAAGGGTAATGGAGGAGGCATTGGAAGGAGAACCATGAGAAGAACAATGAATTTGGGGGATGCTTTGGGGCTAGGACTTGCTGACAATGGGCTCCAACTAACTGATTAG

Protein Analysis

503

Amino Acids

56.53

Weight (kDa)

5.18

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013787)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 125, 287
AclWI GGATC 5 cut(s) 287, 795, 869, 1099, 1128
AcoI YGGCCR 1 cut(s) 109
AcsI RAATTY 3 cut(s) 475, 1219, 1450
AcuI CTGAAG 1 cut(s) 941
AdeI CACNNNGTG 1 cut(s) 319
AfaI GTAC 2 cut(s) 105, 662
AfiI CCNNNNNNNGG 3 cut(s) 271, 417, 1327
AgsI TTSAA 5 cut(s) 406, 749, 809, 1009, 1021
AjnI CCWGG 2 cut(s) 111, 550
AjuI GAANNNNNNNTTGG 2 cut(s) 690, 722
Alw21I GWGCWC 5 cut(s) 264, 315, 1194, 1284, 1320
Alw26I GTCTC 2 cut(s) 422, 551
Alw44I GTGCAC 2 cut(s) 311, 1190
AlwI GGATC 5 cut(s) 287, 795, 869, 1099, 1128
AlwNI CAGNNNCTG 1 cut(s) 308
AoxI GGCC 4 cut(s) 109, 157, 529, 761
ApaLI GTGCAC 2 cut(s) 311, 1190
ApeKI GCWGC 5 cut(s) 392, 506, 1133, 1181, 1388
ApoI RAATTY 3 cut(s) 475, 1219, 1450
Asp700I GAANNNNTTC 1 cut(s) 926
AspA2I CCTAGG 1 cut(s) 764
AspS9I GGNCC 3 cut(s) 52, 623, 679
AsuHPI GGTGA 4 cut(s) 286, 331, 566, 1181
AvaII GGWCC 3 cut(s) 52, 623, 679
AvrII CCTAGG 1 cut(s) 764
AxyI CCTNAGG 1 cut(s) 600
BaeGI GKGCMC 2 cut(s) 315, 1194
BalI TGGCCA 1 cut(s) 111
BanI GGYRCC 2 cut(s) 125, 287
BanII GRGCYC 3 cut(s) 1284, 1320, 1494
BarI GAAGNNNNNNTAC 2 cut(s) 359, 391
BbsI GAAGAC 1 cut(s) 413
Bbv12I GWGCWC 5 cut(s) 264, 315, 1194, 1284, 1320
BbvI GCAGC 5 cut(s) 379, 493, 1145, 1193, 1375
BccI CCATC 8 cut(s) 40, 188, 316, 861, 949, 1247, 1329, 1355
BciT130I CCWGG 2 cut(s) 113, 552
BclI TGATCA 2 cut(s) 1335, 1348
BcoDI GTCTC 2 cut(s) 422, 551
BfaI CTAG 3 cut(s) 765, 915, 1472
BfmI CTRYAG 2 cut(s) 903, 1294
BglII AGATCT 1 cut(s) 460
BisI GCNGC 5 cut(s) 393, 507, 1134, 1182, 1389
BlnI CCTAGG 1 cut(s) 764
BlpI GCTNAGC 1 cut(s) 19
BlsI GCNGC 5 cut(s) 394, 508, 1135, 1183, 1390
Bme1390I CCNGG 2 cut(s) 113, 552
Bme18I GGWCC 3 cut(s) 52, 623, 679
BmgT120I GGNCC 3 cut(s) 52, 623, 679
BmiI GGNNCC 7 cut(s) 53, 127, 289, 680, 681, 882, 1493
BmrFI CCNGG 2 cut(s) 113, 552
BmsI GCATC 5 cut(s) 234, 493, 1021, 1059, 1450
BpiI GAAGAC 1 cut(s) 413
BpmI CTGGAG 2 cut(s) 669, 867
Bpu10I CCTNAGC 3 cut(s) 783, 794, 1283
Bpu1102I GCTNAGC 1 cut(s) 19
BpuEI CTTGAG 3 cut(s) 932, 1099, 1346
BsaI GGTCTC 1 cut(s) 551
BsaJI CCNNGG 5 cut(s) 112, 758, 764, 857, 876
BsaXI ACNNNNNCTCC 2 cut(s) 865, 895
Bsc4I CCNNNNNNNGG 3 cut(s) 271, 417, 1327
Bse21I CCTNAGG 1 cut(s) 600
Bse3DI GCAATG 1 cut(s) 1398
BseBI CCWGG 2 cut(s) 113, 552
BseDI CCNNGG 5 cut(s) 112, 758, 764, 857, 876
BseGI GGATG 3 cut(s) 180, 853, 1465
BseLI CCNNNNNNNGG 3 cut(s) 271, 417, 1327
BseMI GCAATG 1 cut(s) 1398
BseRI GAGGAG 3 cut(s) 354, 509, 1428
BseSI GKGCMC 2 cut(s) 315, 1194
BseXI GCAGC 5 cut(s) 379, 493, 1145, 1193, 1375
BsgI GTGCAG 1 cut(s) 124
BshFI GGCC 4 cut(s) 111, 159, 531, 763
BshNI GGYRCC 2 cut(s) 125, 287
BsiHKAI GWGCWC 5 cut(s) 264, 315, 1194, 1284, 1320
BslFI GGGAC 1 cut(s) 665
BslI CCNNNNNNNGG 3 cut(s) 271, 417, 1327
BsmAI GTCTC 2 cut(s) 422, 551
BsmFI GGGAC 1 cut(s) 665
BsnI GGCC 4 cut(s) 111, 159, 531, 763
Bso31I GGTCTC 1 cut(s) 551
Bsp1286I GDGCHC 6 cut(s) 264, 315, 1194, 1284, 1320, 1494
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
Bsp1720I GCTNAGC 1 cut(s) 19
Bsp19I CCATGG 3 cut(s) 758, 857, 876
BspANI GGCC 4 cut(s) 111, 159, 531, 763
BspLI GGNNCC 7 cut(s) 53, 127, 289, 680, 681, 882, 1493
BspMAI CTGCAG 2 cut(s) 907, 1298
BspPI GGATC 5 cut(s) 287, 795, 869, 1099, 1128
BspT107I GGYRCC 2 cut(s) 125, 287
BspTNI GGTCTC 1 cut(s) 551
BsrDI GCAATG 1 cut(s) 1398
BsrGI TGTACA 1 cut(s) 660
BssECI CCNNGG 5 cut(s) 112, 758, 764, 857, 876
BssMI GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
BssT1I CCWWGG 4 cut(s) 758, 764, 857, 876
Bst2UI CCWGG 2 cut(s) 113, 552
Bst4CI ACNGT 4 cut(s) 380, 1043, 1151, 1189
Bst6I CTCTTC 2 cut(s) 987, 1209
BstAPI GCANNNNNTGC 1 cut(s) 727
BstAUI TGTACA 1 cut(s) 660
BstC8I GCNNGC 5 cut(s) 172, 732, 1290, 1294, 1316
BstDSI CCRYGG 3 cut(s) 758, 857, 876
BstF5I GGATG 3 cut(s) 180, 853, 1465
BstKTI GATC 8 cut(s) 282, 463, 790, 864, 1094, 1123, 1338, 1351
BstMAI GTCTC 2 cut(s) 422, 551
BstMBI GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
BstMWI GCNNNNNNNGC 6 cut(s) 147, 156, 515, 613, 727, 916
BstNI CCWGG 2 cut(s) 113, 552
BstSCI CCNGG 2 cut(s) 111, 550
BstSFI CTRYAG 2 cut(s) 903, 1294
BstSLI GKGCMC 2 cut(s) 315, 1194
BstV1I GCAGC 5 cut(s) 379, 493, 1145, 1193, 1375
BstV2I GAAGAC 1 cut(s) 413
BstX2I RGATCY 4 cut(s) 460, 787, 1091, 1120
BstXI CCANNNNNNTGG 1 cut(s) 443
BstYI RGATCY 4 cut(s) 460, 787, 1091, 1120
Bsu36I CCTNAGG 1 cut(s) 600
BsuRI GGCC 4 cut(s) 111, 159, 531, 763
BtgI CCRYGG 3 cut(s) 758, 857, 876
BtsCI GGATG 3 cut(s) 180, 853, 1465
BtsI GCAGTG 1 cut(s) 912
BtsIMutI CAGTG 7 cut(s) 78, 141, 385, 912, 1048, 1156, 1194
Cac8I GCNNGC 5 cut(s) 172, 732, 1290, 1294, 1316
CaiI CAGNNNCTG 1 cut(s) 308
Cfr13I GGNCC 3 cut(s) 52, 623, 679
Csp6I GTAC 2 cut(s) 104, 661
CspCI CAANNNNNGTGG 2 cut(s) 508, 543
CviAII CATG 9 cut(s) 48, 269, 759, 839, 858, 877, 937, 1333, 1435
CviQI GTAC 2 cut(s) 104, 661
DpnI GATC 8 cut(s) 281, 462, 789, 863, 1093, 1122, 1337, 1350
DpnII GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
DraIII CACNNNGTG 1 cut(s) 319
EaeI YGGCCR 1 cut(s) 109
Eam1104I CTCTTC 2 cut(s) 987, 1209
EarI CTCTTC 2 cut(s) 987, 1209
Ecl136II GAGCTC 2 cut(s) 1282, 1318
Eco130I CCWWGG 4 cut(s) 758, 764, 857, 876
Eco24I GRGCYC 3 cut(s) 1284, 1320, 1494
Eco31I GGTCTC 1 cut(s) 551
Eco47I GGWCC 3 cut(s) 52, 623, 679
Eco53kI GAGCTC 2 cut(s) 1282, 1318
Eco57I CTGAAG 1 cut(s) 941
Eco81I CCTNAGG 1 cut(s) 600
EcoICRI GAGCTC 2 cut(s) 1282, 1318
EcoO109I RGGNCCY 2 cut(s) 52, 679
EcoRII CCWGG 2 cut(s) 111, 550
EcoT14I CCWWGG 4 cut(s) 758, 764, 857, 876
EcoT22I ATGCAT 1 cut(s) 456
EcoT38I GRGCYC 3 cut(s) 1284, 1320, 1494
ErhI CCWWGG 4 cut(s) 758, 764, 857, 876
FaeI CATG 9 cut(s) 51, 272, 762, 842, 861, 880, 940, 1336, 1438
FaqI GGGAC 1 cut(s) 665
FatI CATG 9 cut(s) 47, 268, 758, 838, 857, 876, 936, 1332, 1434
FbaI TGATCA 2 cut(s) 1335, 1348
Fnu4HI GCNGC 5 cut(s) 393, 507, 1134, 1182, 1389
FokI GGATG 3 cut(s) 167, 840, 1472
FriOI GRGCYC 3 cut(s) 1284, 1320, 1494
Fsp4HI GCNGC 5 cut(s) 393, 507, 1134, 1182, 1389
FspBI CTAG 3 cut(s) 765, 915, 1472
GluI GCNGC 5 cut(s) 393, 507, 1134, 1182, 1389
GsuI CTGGAG 2 cut(s) 669, 867
HaeIII GGCC 4 cut(s) 111, 159, 531, 763
Hin1II CATG 9 cut(s) 51, 272, 762, 842, 861, 880, 940, 1336, 1438
HindIII AAGCTT 1 cut(s) 194
HinfI GANTC 6 cut(s) 235, 299, 629, 749, 899, 1106
HphI GGTGA 4 cut(s) 286, 331, 566, 1181
Hpy166II GTNNAC 2 cut(s) 313, 1192
Hpy188III TCNNGA 7 cut(s) 403, 884, 896, 949, 1021, 1325, 1352
Hpy8I GTNNAC 2 cut(s) 313, 1192
HpyAV CCTTC 4 cut(s) 361, 1243, 1396, 1419
HpyCH4III ACNGT 4 cut(s) 380, 1043, 1151, 1189
HpyF10VI GCNNNNNNNGC 6 cut(s) 147, 156, 515, 613, 727, 916
Hsp92II CATG 9 cut(s) 51, 272, 762, 842, 861, 880, 940, 1336, 1438
KflI GGGWCCC 1 cut(s) 679
Ksp22I TGATCA 2 cut(s) 1335, 1348
Kzo9I GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
LmnI GCTCC 5 cut(s) 155, 325, 886, 1323, 1497
Lsp1109I GCAGC 5 cut(s) 379, 493, 1145, 1193, 1375
LweI GCATC 5 cut(s) 234, 493, 1021, 1059, 1450
MaeI CTAG 3 cut(s) 765, 915, 1472
MaeIII GTNAC 1 cut(s) 829
MalI GATC 8 cut(s) 281, 462, 789, 863, 1093, 1122, 1337, 1350
MboI GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
MboII GAAGA 8 cut(s) 230, 376, 418, 512, 964, 1004, 1226, 1452
MfeI CAATTG 1 cut(s) 1158
MflI RGATCY 4 cut(s) 460, 787, 1091, 1120
MhlI GDGCHC 6 cut(s) 264, 315, 1194, 1284, 1320, 1494
MlsI TGGCCA 1 cut(s) 111
MluCI AATT 5 cut(s) 475, 1158, 1219, 1344, 1450
MluNI TGGCCA 1 cut(s) 111
MlyI GAGTC 2 cut(s) 293, 1115
MmeI TCCRAC 1 cut(s) 1185
Mox20I TGGCCA 1 cut(s) 111
Mph1103I ATGCAT 1 cut(s) 456
MroXI GAANNNNTTC 1 cut(s) 926
MscI TGGCCA 1 cut(s) 111
MseI TTAA 5 cut(s) 513, 671, 962, 1116, 1196
MslI CAYNNNNRTG 3 cut(s) 165, 267, 378
Msp20I TGGCCA 1 cut(s) 111
MspA1I CMGCKG 1 cut(s) 1136
MspR9I CCNGG 2 cut(s) 113, 552
MunI CAATTG 1 cut(s) 1158
MvaI CCWGG 2 cut(s) 113, 552
MwoI GCNNNNNNNGC 6 cut(s) 147, 156, 515, 613, 727, 916
NcoI CCATGG 3 cut(s) 758, 857, 876
NdeII GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
NlaIII CATG 9 cut(s) 51, 272, 762, 842, 861, 880, 940, 1336, 1438
NlaIV GGNNCC 7 cut(s) 53, 127, 289, 680, 681, 882, 1493
NsiI ATGCAT 1 cut(s) 456
PdmI GAANNNNTTC 1 cut(s) 926
PfeI GAWTC 4 cut(s) 235, 629, 749, 899
PkrI GCNGC 5 cut(s) 394, 508, 1135, 1183, 1390
PleI GAGTC 2 cut(s) 293, 1114
PpsI GAGTC 2 cut(s) 293, 1114
PpuMI RGGWCCY 2 cut(s) 52, 679
Psp124BI GAGCTC 2 cut(s) 1284, 1320
Psp5II RGGWCCY 2 cut(s) 52, 679
Psp6I CCWGG 2 cut(s) 111, 550
PspGI CCWGG 2 cut(s) 111, 550
PspN4I GGNNCC 7 cut(s) 53, 127, 289, 680, 681, 882, 1493
PspPI GGNCC 3 cut(s) 52, 623, 679
PspPPI RGGWCCY 2 cut(s) 52, 679
PstI CTGCAG 2 cut(s) 907, 1298
PstNI CAGNNNCTG 1 cut(s) 308
PsuI RGATCY 4 cut(s) 460, 787, 1091, 1120
PvuII CAGCTG 1 cut(s) 1136
RsaI GTAC 2 cut(s) 105, 662
RsaNI GTAC 2 cut(s) 104, 661
RseI CAYNNNNRTG 3 cut(s) 165, 267, 378
SacI GAGCTC 2 cut(s) 1284, 1320
SaqAI TTAA 5 cut(s) 513, 671, 962, 1116, 1196
SatI GCNGC 5 cut(s) 393, 507, 1134, 1182, 1389
Sau3AI GATC 8 cut(s) 279, 460, 787, 861, 1091, 1120, 1335, 1348
Sau96I GGNCC 3 cut(s) 52, 623, 679
SbfI CCTGCAGG 1 cut(s) 1298
SchI GAGTC 2 cut(s) 293, 1115
ScrFI CCNGG 2 cut(s) 113, 552
SdaI CCTGCAGG 1 cut(s) 1298
SduI GDGCHC 6 cut(s) 264, 315, 1194, 1284, 1320, 1494
SfaNI GCATC 5 cut(s) 234, 493, 1021, 1059, 1450
SfcI CTRYAG 2 cut(s) 903, 1294
SinI GGWCC 3 cut(s) 52, 623, 679
SmiMI CAYNNNNRTG 3 cut(s) 165, 267, 378
SmlI CTYRAG 3 cut(s) 947, 1078, 1325
SmoI CTYRAG 3 cut(s) 947, 1078, 1325
Sse8387I CCTGCAGG 1 cut(s) 1298
Sse9I AATT 5 cut(s) 475, 1158, 1219, 1344, 1450
SspMI CTAG 3 cut(s) 765, 915, 1472
SstI GAGCTC 2 cut(s) 1284, 1320
StyD4I CCNGG 2 cut(s) 111, 550
StyI CCWWGG 4 cut(s) 758, 764, 857, 876
TaaI ACNGT 4 cut(s) 380, 1043, 1151, 1189
TasI AATT 5 cut(s) 475, 1158, 1219, 1344, 1450
TatI WGTACW 1 cut(s) 660
TfiI GAWTC 4 cut(s) 235, 629, 749, 899
Tru1I TTAA 5 cut(s) 513, 671, 962, 1116, 1196
Tru9I TTAA 5 cut(s) 513, 671, 962, 1116, 1196
TscAI CASTG 7 cut(s) 85, 148, 385, 912, 1048, 1156, 1194
TseI GCWGC 5 cut(s) 392, 506, 1133, 1181, 1388
TspDTI ATGAA 6 cut(s) 17, 231, 953, 1077, 1255, 1463
TspGWI ACGGA 1 cut(s) 573
TspRI CASTG 7 cut(s) 85, 148, 385, 912, 1048, 1156, 1194
VneI GTGCAC 2 cut(s) 311, 1190
VpaK11BI GGWCC 3 cut(s) 52, 623, 679
XapI RAATTY 3 cut(s) 475, 1219, 1450
XcmI CCANNNNNNNNNTGG 1 cut(s) 119
XmaJI CCTAGG 1 cut(s) 764
XmnI GAANNNNTTC 1 cut(s) 926
XspI CTAG 3 cut(s) 765, 915, 1472
Zsp2I ATGCAT 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.