Rmu_sc0007829.1_g000006

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007829.1
Physical Location & Seq
Forward (+)
30014 .. 31510
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007829.1_g000006.1.cds

Sequence Viewer

Length: 1497 bp
atgaagaaatcaagctcggccacaccatcgaaccccaaatgggtcctaccctaccagacccaaaacctcactgacctctacaccttgggcaagatccttggccagggtcagtttggaaccacctacctctgcaccgagaagtccacaggccacaacttcgcctgcaaatccatcccgaagcgcaagctgctctgcaaagaggactatgaagacgtgtggagggagattcagatgatgcaccatttgtcggagcacccgcatgtggtgagaatccgaggcacctatgaagaccctggctcggttcacttggtcatggatctatgcaaaggaggagagctctttgatcggattgtgaagaagggtcattacagtgagagagaggctgcaaagctcataaagactattgttggggtcgtggaggcctgtcactctttaggggttatgcaccgtgatctaaagcctgagaatttcttgttcgacagcgacgaggaagactctgctctcaaagctacggacttcgggctttcggttttctacaagccaggtgaaatcttctctgatgtagtcggtagtccttactatgttgcccctgaggtgctgtgcaagcactatgggcctgaatcagatgtgtggagtgcaggagtgatcttgtatattctgttaagtggggtgcctccattttgggctgagactgagactgggatcttcaggcagattttgcagtcaagattggattttgagtcccaaccatggcctgggatttcagacagtgccaaggacttgattgccaaaatgcttgagaggaacccaaggaaaagaatcactgcccatcaggtgatttgccacccatggatcatagacgacaccattgctccggataagcctctggattccgctgtgctttcgagattgaagcagttctcggcaatgaacaagctgaagaagatggcgctgagggtcatcgctgagaggctgtctgaggaggagattggtgggctgaaggagcttttcaagatgattgatgcagatgatagtggaagcatcacatttgaggagctgaaggagggtttgaggaaagtggggtctgagctaatggagagtgagatcaaggatctaatggaggcagctgacattgacaacaatggaacaatcgactatggtgagttccttgcagcaactgtgcacttgaacaagttggagagggaggagaatctgctgtcagcattctcgtttttcgacaaagatggaagcgggtacatcaccattgatgagcttacacaagcctgtgttgagtttggattgggggaggtgcatctggaggatatgatcagagaaattgatcaggacaatgatgggcagatcgattatggagaatttgctgcaatgatgaggaaggggaatggaggcattggaaggagaactatgaccagaactataaacttgggggatgcttttggcctgggagtggataccaatggagtccagctaactgaatag

Protein Analysis

498

Amino Acids

55.85

Weight (kDa)

5.08

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013787)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 278, 670
AccB7I CCANNNNNTGG 1 cut(s) 755
AccIII TCCGGA 1 cut(s) 874
AciI CCGC 3 cut(s) 257, 894, 1251
AclWI GGATC 5 cut(s) 88, 324, 710, 860, 1119
AcoI YGGCCR 2 cut(s) 18, 100
AcsI RAATTY 2 cut(s) 466, 1373
AcuI CTGAAG 4 cut(s) 691, 959, 1019, 1079
AfaI GTAC 1 cut(s) 1256
AfiI CCNNNNNNNGG 8 cut(s) 40, 103, 247, 262, 298, 750, 755, 1465
AflIII ACRYGT 1 cut(s) 213
AgsI TTSAA 3 cut(s) 913, 1012, 1189
AjiI CACGTC 1 cut(s) 214
AjnI CCWGG 5 cut(s) 102, 292, 541, 754, 1458
Alw21I GWGCWC 3 cut(s) 255, 339, 1185
Alw26I GTCTC 2 cut(s) 683, 689
Alw44I GTGCAC 1 cut(s) 1181
AlwI GGATC 5 cut(s) 88, 324, 710, 860, 1119
AlwNI CAGNNNCTG 1 cut(s) 1178
Aor13HI TCCGGA 1 cut(s) 874
AoxI GGCC 7 cut(s) 18, 100, 148, 420, 614, 752, 1456
ApaLI GTGCAC 1 cut(s) 1181
ApeKI GCWGC 5 cut(s) 187, 383, 1124, 1172, 1379
ApoI RAATTY 2 cut(s) 466, 1373
Asp700I GAANNNNTTC 1 cut(s) 917
AspLEI GCGC 2 cut(s) 183, 952
AspS9I GGNCC 2 cut(s) 43, 614
AsuHPI GGTGA 5 cut(s) 277, 557, 847, 1172, 1252
AvaII GGWCC 1 cut(s) 43
AxyI CCTNAGG 1 cut(s) 591
BaeGI GKGCMC 1 cut(s) 1185
BalI TGGCCA 1 cut(s) 102
BanI GGYRCC 2 cut(s) 278, 670
BanII GRGCYC 1 cut(s) 339
BarI GAAGNNNNNNTAC 2 cut(s) 350, 382
BbsI GAAGAC 3 cut(s) 216, 294, 498
Bbv12I GWGCWC 3 cut(s) 255, 339, 1185
BbvCI CCTCAGC 1 cut(s) 953
BbvI GCAGC 5 cut(s) 174, 370, 1136, 1184, 1366
BccI CCATC 6 cut(s) 34, 179, 837, 940, 1238, 1346
BcgI CGANNNNNNTGC 2 cut(s) 851, 885
BciT130I CCWGG 5 cut(s) 104, 294, 543, 756, 1460
BciVI GTATCC 1 cut(s) 1462
BclI TGATCA 2 cut(s) 1326, 1339
BcoDI GTCTC 2 cut(s) 683, 689
BfoI RGCGCY 1 cut(s) 953
BfuI GTATCC 1 cut(s) 1462
BisI GCNGC 5 cut(s) 188, 384, 1125, 1173, 1380
BlsI GCNGC 5 cut(s) 189, 385, 1126, 1174, 1381
Bme1390I CCNGG 5 cut(s) 104, 294, 543, 756, 1460
Bme18I GGWCC 1 cut(s) 43
BmgBI CACGTC 1 cut(s) 214
BmgT120I GGNCC 2 cut(s) 43, 614
BmiI GGNNCC 5 cut(s) 44, 118, 280, 672, 806
BmrFI CCNGG 5 cut(s) 104, 294, 543, 756, 1460
BmrI ACTGGG 1 cut(s) 708
BmsI GCATC 5 cut(s) 225, 1012, 1050, 1321, 1438
BmuI ACTGGG 1 cut(s) 708
BpiI GAAGAC 3 cut(s) 216, 294, 498
BplI GAGNNNNNCTC 4 cut(s) 321, 353, 479, 511
BpmI CTGGAG 1 cut(s) 1337
Bpu10I CCTNAGC 1 cut(s) 953
BpuEI CTTGAG 1 cut(s) 818
Bsa29I ATCGAT 1 cut(s) 1362
BsaWI WCCGGW 1 cut(s) 874
BsaXI ACNNNNNCTCC 2 cut(s) 856, 886
Bsc4I CCNNNNNNNGG 8 cut(s) 40, 103, 247, 262, 298, 750, 755, 1465
Bse1I ACTGG 1 cut(s) 703
Bse21I CCTNAGG 1 cut(s) 591
Bse3DI GCAATG 3 cut(s) 867, 933, 1389
BseAI TCCGGA 1 cut(s) 874
BseBI CCWGG 5 cut(s) 104, 294, 543, 756, 1460
BseCI ATCGAT 1 cut(s) 1362
BseGI GGATG 2 cut(s) 171, 1453
BseLI CCNNNNNNNGG 8 cut(s) 40, 103, 247, 262, 298, 750, 755, 1465
BseMI GCAATG 3 cut(s) 867, 933, 1389
BseMII CTCAG 8 cut(s) 453, 582, 678, 684, 944, 957, 969, 1077
BseNI ACTGG 1 cut(s) 703
BseRI GAGGAG 5 cut(s) 345, 995, 998, 1067, 1220
BseSI GKGCMC 1 cut(s) 1185
BseXI GCAGC 5 cut(s) 174, 370, 1136, 1184, 1366
BsgI GTGCAG 2 cut(s) 115, 657
BshFI GGCC 7 cut(s) 20, 102, 150, 422, 616, 754, 1458
BshNI GGYRCC 2 cut(s) 278, 670
BshVI ATCGAT 1 cut(s) 1362
BsiHKAI GWGCWC 3 cut(s) 255, 339, 1185
BsiSI CCGG 1 cut(s) 875
BslFI GGGAC 1 cut(s) 727
BslI CCNNNNNNNGG 8 cut(s) 40, 103, 247, 262, 298, 750, 755, 1465
BsmAI GTCTC 2 cut(s) 683, 689
BsmFI GGGAC 1 cut(s) 727
BsmI GAATGC 1 cut(s) 1223
BsnI GGCC 7 cut(s) 20, 102, 150, 422, 616, 754, 1458
Bsp1286I GDGCHC 3 cut(s) 255, 339, 1185
Bsp13I TCCGGA 1 cut(s) 874
Bsp19I CCATGG 2 cut(s) 749, 848
BspACI CCGC 3 cut(s) 257, 894, 1251
BspANI GGCC 7 cut(s) 20, 102, 150, 422, 616, 754, 1458
BspCNI CTCAG 8 cut(s) 454, 583, 679, 685, 945, 958, 970, 1078
BspDI ATCGAT 1 cut(s) 1362
BspEI TCCGGA 1 cut(s) 874
BspLI GGNNCC 5 cut(s) 44, 118, 280, 672, 806
BspPI GGATC 5 cut(s) 88, 324, 710, 860, 1119
BspT107I GGYRCC 2 cut(s) 278, 670
BsrDI GCAATG 3 cut(s) 867, 933, 1389
BsrI ACTGG 1 cut(s) 703
BssT1I CCWWGG 6 cut(s) 84, 97, 749, 774, 809, 848
Bst2UI CCWGG 5 cut(s) 104, 294, 543, 756, 1460
Bst4CI ACNGT 4 cut(s) 371, 449, 770, 1180
BstAPI GCANNNNNTGC 1 cut(s) 718
BstC8I GCNNGC 3 cut(s) 163, 185, 605
BstDEI CTNAG 8 cut(s) 462, 591, 687, 693, 953, 966, 978, 1086
BstDSI CCRYGG 2 cut(s) 749, 848
BstENI CCTNNNNNAGG 1 cut(s) 101
BstF5I GGATG 2 cut(s) 171, 1453
BstH2I RGCGCY 1 cut(s) 953
BstHHI GCGC 2 cut(s) 183, 952
BstMAI GTCTC 2 cut(s) 683, 689
BstMWI GCNNNNNNNGC 6 cut(s) 187, 506, 604, 613, 718, 1003
BstNI CCWGG 5 cut(s) 104, 294, 543, 756, 1460
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 5 cut(s) 102, 292, 541, 754, 1458
BstSLI GKGCMC 1 cut(s) 1185
BstV1I GCAGC 5 cut(s) 174, 370, 1136, 1184, 1366
BstV2I GAAGAC 3 cut(s) 216, 294, 498
BstX2I RGATCY 4 cut(s) 93, 316, 702, 1111
BstYI RGATCY 4 cut(s) 93, 316, 702, 1111
Bsu15I ATCGAT 1 cut(s) 1362
Bsu36I CCTNAGG 1 cut(s) 591
BsuI GTATCC 1 cut(s) 1462
BsuRI GGCC 7 cut(s) 20, 102, 150, 422, 616, 754, 1458
BsuTUI ATCGAT 1 cut(s) 1362
BtgI CCRYGG 2 cut(s) 749, 848
BtgZI GCGATG 1 cut(s) 946
BtrI CACGTC 1 cut(s) 214
BtsCI GGATG 2 cut(s) 171, 1453
BtsI GCAGTG 1 cut(s) 822
BtsIMutI CAGTG 4 cut(s) 69, 376, 775, 822
Cac8I GCNNGC 3 cut(s) 163, 185, 605
CaiI CAGNNNCTG 1 cut(s) 1178
CfoI GCGC 2 cut(s) 183, 952
Cfr13I GGNCC 2 cut(s) 43, 614
ClaI ATCGAT 1 cut(s) 1362
Csp6I GTAC 1 cut(s) 1255
CviAII CATG 4 cut(s) 260, 313, 750, 849
CviQI GTAC 1 cut(s) 1255
DdeI CTNAG 8 cut(s) 462, 591, 687, 693, 953, 966, 978, 1086
EaeI YGGCCR 2 cut(s) 18, 100
Ecl136II GAGCTC 1 cut(s) 337
Eco130I CCWWGG 6 cut(s) 84, 97, 749, 774, 809, 848
Eco147I AGGCCT 1 cut(s) 422
Eco24I GRGCYC 1 cut(s) 339
Eco47I GGWCC 1 cut(s) 43
Eco53kI GAGCTC 1 cut(s) 337
Eco57I CTGAAG 4 cut(s) 691, 959, 1019, 1079
Eco81I CCTNAGG 1 cut(s) 591
EcoICRI GAGCTC 1 cut(s) 337
EcoNI CCTNNNNNAGG 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 43
EcoRII CCWGG 5 cut(s) 102, 292, 541, 754, 1458
EcoT14I CCWWGG 6 cut(s) 84, 97, 749, 774, 809, 848
EcoT38I GRGCYC 1 cut(s) 339
ErhI CCWWGG 6 cut(s) 84, 97, 749, 774, 809, 848
FaeI CATG 4 cut(s) 263, 316, 753, 852
FaqI GGGAC 1 cut(s) 727
FatI CATG 4 cut(s) 259, 312, 749, 848
FauI CCCGC 2 cut(s) 264, 1244
FbaI TGATCA 2 cut(s) 1326, 1339
Fnu4HI GCNGC 5 cut(s) 188, 384, 1125, 1173, 1380
FokI GGATG 2 cut(s) 158, 1460
FriOI GRGCYC 1 cut(s) 339
Fsp4HI GCNGC 5 cut(s) 188, 384, 1125, 1173, 1380
GlaI GCGC 2 cut(s) 182, 951
GluI GCNGC 5 cut(s) 188, 384, 1125, 1173, 1380
GsuI CTGGAG 1 cut(s) 1337
HaeII RGCGCY 1 cut(s) 953
HaeIII GGCC 7 cut(s) 20, 102, 150, 422, 616, 754, 1458
HapII CCGG 1 cut(s) 875
HhaI GCGC 2 cut(s) 183, 952
Hin1II CATG 4 cut(s) 263, 316, 753, 852
Hin6I GCGC 2 cut(s) 181, 950
HinP1I GCGC 2 cut(s) 181, 950
HinfI GANTC 9 cut(s) 226, 270, 494, 620, 740, 819, 890, 1210, 1479
HpaII CCGG 1 cut(s) 875
HphI GGTGA 5 cut(s) 277, 557, 847, 1172, 1252
Hpy166II GTNNAC 3 cut(s) 144, 304, 1183
Hpy188III TCNNGA 8 cut(s) 175, 726, 875, 887, 906, 1012, 1316, 1343
Hpy8I GTNNAC 3 cut(s) 144, 304, 1183
Hpy99I CGWCG 1 cut(s) 488
HpyAV CCTTC 5 cut(s) 352, 994, 1054, 1387, 1407
HpyCH4III ACNGT 4 cut(s) 371, 449, 770, 1180
HpyCH4IV ACGT 1 cut(s) 213
HpyF10VI GCNNNNNNNGC 6 cut(s) 187, 506, 604, 613, 718, 1003
HpyF3I CTNAG 8 cut(s) 462, 591, 687, 693, 953, 966, 978, 1086
HpySE526I ACGT 1 cut(s) 213
Hsp92II CATG 4 cut(s) 263, 316, 753, 852
HspAI GCGC 2 cut(s) 181, 950
Kpn2I TCCGGA 1 cut(s) 874
Ksp22I TGATCA 2 cut(s) 1326, 1339
LmnI GCTCC 4 cut(s) 250, 877, 1003, 1054
Lsp1109I GCAGC 5 cut(s) 174, 370, 1136, 1184, 1366
LweI GCATC 5 cut(s) 225, 1012, 1050, 1321, 1438
MaeII ACGT 1 cut(s) 213
MaeIII GTNAC 1 cut(s) 425
MboII GAAGA 9 cut(s) 16, 221, 299, 367, 503, 544, 697, 952, 955
MflI RGATCY 4 cut(s) 93, 316, 702, 1111
MhlI GDGCHC 3 cut(s) 255, 339, 1185
MlsI TGGCCA 1 cut(s) 102
MluCI AATT 3 cut(s) 466, 1335, 1373
MluNI TGGCCA 1 cut(s) 102
MlyI GAGTC 3 cut(s) 488, 749, 1488
MmeI TCCRAC 2 cut(s) 228, 1176
Mox20I TGGCCA 1 cut(s) 102
MroI TCCGGA 1 cut(s) 874
MroXI GAANNNNTTC 1 cut(s) 917
MscI TGGCCA 1 cut(s) 102
MseI TTAA 1 cut(s) 662
MslI CAYNNNNRTG 2 cut(s) 258, 369
Msp20I TGGCCA 1 cut(s) 102
MspA1I CMGCKG 2 cut(s) 896, 1127
MspI CCGG 1 cut(s) 875
MspR9I CCNGG 5 cut(s) 104, 294, 543, 756, 1460
Mva1269I GAATGC 1 cut(s) 1223
MvaI CCWGG 5 cut(s) 104, 294, 543, 756, 1460
MwoI GCNNNNNNNGC 6 cut(s) 187, 506, 604, 613, 718, 1003
NcoI CCATGG 2 cut(s) 749, 848
NlaIII CATG 4 cut(s) 263, 316, 753, 852
NlaIV GGNNCC 5 cut(s) 44, 118, 280, 672, 806
NmeAIII GCCGAG 1 cut(s) 902
NmuCI GTSAC 1 cut(s) 425
NspI RCATGY 1 cut(s) 263
PceI AGGCCT 1 cut(s) 422
PcsI WCGNNNNNNNCGW 1 cut(s) 483
PctI GAATGC 1 cut(s) 1223
PdmI GAANNNNTTC 1 cut(s) 917
PfeI GAWTC 6 cut(s) 226, 270, 620, 819, 890, 1210
PflMI CCANNNNNTGG 1 cut(s) 755
PkrI GCNGC 5 cut(s) 189, 385, 1126, 1174, 1381
PleI GAGTC 3 cut(s) 488, 748, 1487
PpsI GAGTC 3 cut(s) 488, 748, 1487
PpuMI RGGWCCY 1 cut(s) 43
Psp124BI GAGCTC 1 cut(s) 339
Psp5II RGGWCCY 1 cut(s) 43
Psp6I CCWGG 5 cut(s) 102, 292, 541, 754, 1458
PspGI CCWGG 5 cut(s) 102, 292, 541, 754, 1458
PspN4I GGNNCC 5 cut(s) 44, 118, 280, 672, 806
PspPI GGNCC 2 cut(s) 43, 614
PspPPI RGGWCCY 1 cut(s) 43
PstNI CAGNNNCTG 1 cut(s) 1178
PsuI RGATCY 4 cut(s) 93, 316, 702, 1111
PvuII CAGCTG 1 cut(s) 1127
RsaI GTAC 1 cut(s) 1256
RsaNI GTAC 1 cut(s) 1255
RseI CAYNNNNRTG 2 cut(s) 258, 369
SacI GAGCTC 1 cut(s) 339
SaqAI TTAA 1 cut(s) 662
SatI GCNGC 5 cut(s) 188, 384, 1125, 1173, 1380
Sau96I GGNCC 2 cut(s) 43, 614
SchI GAGTC 3 cut(s) 488, 749, 1488
ScrFI CCNGG 5 cut(s) 104, 294, 543, 756, 1460
SduI GDGCHC 3 cut(s) 255, 339, 1185
SfaNI GCATC 5 cut(s) 225, 1012, 1050, 1321, 1438
SinI GGWCC 1 cut(s) 43
SmiMI CAYNNNNRTG 2 cut(s) 258, 369
SmlI CTYRAG 1 cut(s) 797
SmoI CTYRAG 1 cut(s) 797
Sse9I AATT 3 cut(s) 466, 1335, 1373
SseBI AGGCCT 1 cut(s) 422
SsiI CCGC 3 cut(s) 257, 894, 1251
SstI GAGCTC 1 cut(s) 339
StuI AGGCCT 1 cut(s) 422
StyD4I CCNGG 5 cut(s) 102, 292, 541, 754, 1458
StyI CCWWGG 6 cut(s) 84, 97, 749, 774, 809, 848
TaaI ACNGT 4 cut(s) 371, 449, 770, 1180
TaiI ACGT 1 cut(s) 216
TaqI TCGA 6 cut(s) 29, 477, 905, 1152, 1236, 1362
TasI AATT 3 cut(s) 466, 1335, 1373
TfiI GAWTC 6 cut(s) 226, 270, 620, 819, 890, 1210
Tru1I TTAA 1 cut(s) 662
Tru9I TTAA 1 cut(s) 662
TscAI CASTG 4 cut(s) 76, 376, 775, 829
TseFI GTSAC 1 cut(s) 425
TseI GCWGC 5 cut(s) 187, 383, 1124, 1172, 1379
Tsp45I GTSAC 1 cut(s) 425
TspDTI ATGAA 4 cut(s) 17, 222, 300, 944
TspGWI ACGGA 1 cut(s) 527
TspRI CASTG 4 cut(s) 76, 376, 775, 829
Van91I CCANNNNNTGG 1 cut(s) 755
VneI GTGCAC 1 cut(s) 1181
VpaK11BI GGWCC 1 cut(s) 43
XagI CCTNNNNNAGG 1 cut(s) 101
XapI RAATTY 2 cut(s) 466, 1373
XceI RCATGY 1 cut(s) 263
XcmI CCANNNNNNNNNTGG 2 cut(s) 110, 752
XmnI GAANNNNTTC 1 cut(s) 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.