Prupe.3G100000_v2.0.a1

disease resistance protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
7670594 .. 7674477
3884 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G100000.1

Sequence Viewer

Length: 2868 bp
ATGGCTGATGCACTTGCCCTGGTTTCCAGACTGTTAGACCAACTGGACGGAAAGGAGGAATTTACAGAGCTCACCGGAATCCTCCGCCACATTGAACCAGTGCTGGAGGATGCAGAGAAGAGGCGAGTGAAAGAGGAGCGCGTGAGAGTGTGGTTGGAGAAGCTCAAAGACGTGAGCTGCGACATCGAAGACGTGTTGGATGAGTTGAGCACTGCCATACCCAAATTGGAAGAAGAAACTCATGGAACAAAGAAAGCTTTCGTTTTGATGAAGGTATGCTTTTCTCGGCTTACCTCTTGCTTTTGCTGCAGTCAATTAGTCAATCGGGTCGGTCAACGACGTCGTATTAAGTGTTTGAGGGAAAGACTGAGTGTGATTTTCGCTGAGAGTCATGGGTTCAGGTTTAGAAAGTACAGAGAGATTGATCAGCCGGAGAGAGTAGGAACAGGAATTTCTACCTCCCATAAATTGATTGAAGAACCGAGTTTATATGGTCGAGATGAAGATCAGAAGATGTTAATAAGAAATTTGGTATCTGAGAGTAGTGAAGAGGGTGTGGTTAGGGGGCCTGGTGTCATCTCCATTGTTGGTGTGGGTGGAATTGGGAAAACCACTCTTGCACACTTAGTATATAATGATCAAAAGGTTAAAGCTCATTTTGATTTGAGAATTTGGGTGTGTAAGTCGTTTTCGTCTCGTGAGTTGAGGATTGCTGAAGAAATTCTTCAAGTTATTGCCCAAAAAACTAAGACATCAAACTTGGTTGAATTGGAAGCTTTACTCGAGAGTATTCGTGCATCTGTTTCAGGAAAGAAGTTCCTTCTTGTGTTGGATAATGTGTGGGATCCCCGGGATGCAGACTTTTCGAAGGGTTATCTTCTTTGGAAGCTTTTGCGTTTTGGTGTGGCGGGCAGTAGAATTTTGGTGACCGCAAGAACTGAGCGCATGGCTAAGAGGATTGGAGCAACTAGGATGATTCATCTAAATGCATTGTCACAAGAATCTTCTTGGTTGACATTTAGGCAAATTGCATTTTTTGGAAGGGATGCAAGTGAGTGCAAACAACTAGAAAAAATTGGTAAGAAAATTGTGAAGATCTGCTATGGCTTGCCTCTTGCGATAAAGGTCATCGGGGGTCTCCTGCACTTTAAGAGTAGTAGAGGAGAGTGGGAATCTGTTTTGCGAGAGATGATCTGGGAATTGGGACATGCAAACAACATAAGCACTTTTGACCTGCTTCTGTTTAGTTATCATGATTTGTCTCCTGCACTAAGATGTTGTTTCTCATATTGCGCAATTTTTCCGAAAGATCACGTGATTGAGAGAGACAATTTAATTAAAATGTGGATGTCACAAGGTTTTCTTGGTCTCAGTGTTGACAGAAACAAAGAGAAGGAAATGTTAGGTCAAGAATACTTTATGAACTTAGCAATGCGGTCTTTCTTCCAGGATTTCGAAAGAGATTATAAAGGAAATATTATCAAATGCAAGATGCATGACTTGGTGCATCTCTTGGCCCAATATGTCACTAGATATGAATGCTTTATCACGGGTGTTGATTGTGTTGAAGAGCCAGACGTTGAAAGTGCCCTTCATTCTACTTTTGTCCAAGCACTGGGGGGTTACATAGGAGAGCCAGACATTAAAGGGGCTCGTCATTCTACTTTTGTCCTAGCACCTGGGGATGCAATTCCTATCTCAACGCACAACAGAAAAGGACTGCGCACCCTCTTCACTTTGTGTTCAATGAATGTTCCGATAAATCCCGGGACATTCGTGCATCTAACATGTCTTAGAACATTAAATTTGAGTCGCTGCTGGTTCAAAGAACTACCACAGGAGGTTGGTAAGTTCATACATTTGAGATATCTCAATTTATCTAGTAATGATGAGTTGGAAATATTGCCGGAGACATTGTGTGATTTATCGAACTTGCAAACCTTGTTGATCAACAATTGCATGCAAATTAGAAAACTACCAGAAGGGATGGGGAAACTAGTGAACTTAAGACATCTTCACCTTGATTATTGTTTTAATCTAGAGAGTTTGCCGAGGGGAATTGCGAAGCTGACTTCTCTTCAAACACTCGATATGCTTGTTGTACCATGTGATGATGAGGAAGAAGCATTTAAGCTGGGAGATTTGAAAAATTTGAACCTCGAAGGGTATCTTCATATTTGTAGGTGTGGAAACCTACAAAATGTGACTGCGGCTGAGAAAGTAGAACTCATTACTAGAGGGAACCTTGTTGATTTGAATCTAGATTTTGATTGGAGTGAAGAGAGGAGACTTAAAGATAAAATTATACTTGAAGCTTTACAACCACATCCAAATTTGGAATCTTTAGAGATTCGAAAATATCGAGGCACCACCATATCTCCAGATTGGATGCTGCGGTTAACAAATTTGAGAAGGCTTATCCTGCATTCCTGCTCAGATTGTGAGTCTTTACCTCCTTTGGGGAAACTCCCATCCCTTGAATCATTGGAAATATGTCTTATGAGTAGCATGAAAAAGGTTGGGTGTGAGTTTTTGGGAATAGATTCTGGTGGGTCAGAGAACTCATCTATTATTTCATTCCCGAAATTGAGGGAACTTCGATTTTCATCCTTGTTCAAGTGGAATGCATGGGTAGGGAGTGCAAGGTCCATGAAAGGAGATGCTTCTATCAAAATAATGCCAAGTCTTCATACCTTAGAGATTGACTCTTGCTTTTGCATTAAAGTGCTTCCATACTTCCTCCGAAGAATACCACTGCAGAATTTGACGATCAACAAGTGTAAAATTCTCCAAAAACATTGCCAAAAGGAGAAAGGAAAAGAGTGGTTCAAAATTTCTCACATCCCAAATATCAAAATTAATATTTAA
Functional Annotation

Protein Analysis

956

Amino Acids

109.12

Weight (kDa)

8.44

Isoelectric Point (pI)

47.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021196)

Species Orthologous Gene IDs
malus_domestica MD17G1224300.v1.1
prunus_persica Prupe.3G100000_v2.0.a1
pyrus_communis pycom17g22800
rosa_laevigata RLG00000019277 RLG00000019281

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1467
AatII GACGTC 1 cut(s) 343
Acc16I TGCGCA 2 cut(s) 1294, 1724
Acc36I ACCTGC 1 cut(s) 1242
AccB1I GGYRCC 1 cut(s) 2366
AccB7I CCANNNNNTGG 1 cut(s) 1615
AccII CGCG 1 cut(s) 141
AciI CCGC 6 cut(s) 85, 908, 930, 1435, 2210, 2395
AclWI GGATC 2 cut(s) 839, 852
AcuI CTGAAG 1 cut(s) 735
AcvI CACGTG 1 cut(s) 1315
AcyI GRCGYC 1 cut(s) 340
AdeI CACNNNGTG 1 cut(s) 1740
AfaI GTAC 2 cut(s) 413, 2103
AfiI CCNNNNNNNGG 2 cut(s) 1615, 2459
AflII CTTAAG 1 cut(s) 2005
AflIII ACRYGT 2 cut(s) 192, 1787
AhlI ACTAGT 1 cut(s) 1996
AjiI CACGTC 2 cut(s) 172, 193
AjnI CCWGG 4 cut(s) 18, 568, 1446, 1678
Alw21I GWGCWC 2 cut(s) 72, 212
Alw26I GTCTC 7 cut(s) 699, 1142, 1266, 1320, 1373, 1904, 2281
AlwI GGATC 2 cut(s) 839, 852
Ama87I CYCGRG 3 cut(s) 782, 849, 1766
AoxI GGCC 2 cut(s) 566, 1515
ApeKI GCWGC 4 cut(s) 177, 306, 1815, 2392
AseI ATTAAT 1 cut(s) 2859
Asp700I GAANNNNTTC 4 cut(s) 257, 720, 723, 2542
AspLEI GCGC 4 cut(s) 141, 945, 1295, 1725
AspS9I GGNCC 3 cut(s) 566, 1516, 2646
AsuC2I CCSGG 4 cut(s) 850, 851, 1767, 1768
AsuHPI GGTGA 3 cut(s) 64, 937, 2009
AsuII TTCGAA 3 cut(s) 866, 1455, 2353
AvaI CYCGRG 3 cut(s) 782, 849, 1766
AvaII GGWCC 1 cut(s) 2646
BaeGI GKGCMC 1 cut(s) 1591
BamHI GGATCC 1 cut(s) 844
BanI GGYRCC 1 cut(s) 2366
BanII GRGCYC 2 cut(s) 72, 1654
BauI CACGAG 1 cut(s) 696
BbrPI CACGTG 1 cut(s) 1315
BbsI GAAGAC 2 cut(s) 195, 2678
Bbv12I GWGCWC 2 cut(s) 72, 212
BbvI GCAGC 4 cut(s) 164, 293, 1802, 2379
BccI CCATC 2 cut(s) 1981, 2479
BcgI CGANNNNNNTGC 2 cut(s) 846, 880
BciT130I CCWGG 4 cut(s) 20, 570, 1448, 1680
BclI TGATCA 3 cut(s) 424, 637, 1947
BcnI CCSGG 4 cut(s) 850, 851, 1767, 1768
BcoDI GTCTC 7 cut(s) 699, 1142, 1266, 1320, 1373, 1904, 2281
BcuI ACTAGT 1 cut(s) 1996
BfaI CTAG 9 cut(s) 969, 1067, 1530, 1673, 1881, 1997, 2039, 2235, 2261
BfmI CTRYAG 2 cut(s) 307, 2756
BfrI CTTAAG 1 cut(s) 2005
BfuAI ACCTGC 1 cut(s) 1242
BglII AGATCT 1 cut(s) 1095
BisI GCNGC 5 cut(s) 178, 307, 1816, 2211, 2393
BlsI GCNGC 5 cut(s) 179, 308, 1817, 2212, 2394
Bme1390I CCNGG 8 cut(s) 20, 570, 850, 851, 1448, 1680, 1767, 1768
Bme18I GGWCC 1 cut(s) 2646
BmeT110I CYCGRG 3 cut(s) 782, 849, 1766
BmgBI CACGTC 2 cut(s) 172, 193
BmgT120I GGNCC 3 cut(s) 566, 1516, 2646
BmiI GGNNCC 4 cut(s) 567, 846, 2243, 2368
BmrFI CCNGG 8 cut(s) 20, 570, 850, 851, 1448, 1680, 1767, 1768
BmrI ACTGGG 1 cut(s) 1625
BmuI ACTGGG 1 cut(s) 1625
BpiI GAAGAC 2 cut(s) 195, 2678
BplI GAGNNNNNCTC 2 cut(s) 2690, 2722
BpmI CTGGAG 2 cut(s) 125, 2364
Bpu14I TTCGAA 3 cut(s) 866, 1455, 2353
BpuMI CCSGG 4 cut(s) 850, 851, 1767, 1768
BsaAI YACGTR 1 cut(s) 1315
BsaBI GATNNNNATC 3 cut(s) 504, 2256, 2605
BsaHI GRCGYC 1 cut(s) 340
BsaI GGTCTC 2 cut(s) 1142, 1373
BsaJI CCNNGG 6 cut(s) 18, 848, 849, 1679, 1766, 2051
BsaWI WCCGGW 1 cut(s) 74
BsaXI ACNNNNNCTCC 4 cut(s) 1901, 1931, 2362, 2392
Bsc4I CCNNNNNNNGG 2 cut(s) 1615, 2459
Bse1I ACTGG 3 cut(s) 48, 98, 1620
Bse3DI GCAATG 2 cut(s) 1437, 2797
Bse8I GATNNNNATC 3 cut(s) 504, 2256, 2605
BseBI CCWGG 4 cut(s) 20, 570, 1448, 1680
BseDI CCNNGG 6 cut(s) 18, 848, 849, 1679, 1766, 2051
BseJI GATNNNNATC 3 cut(s) 504, 2256, 2605
BseLI CCNNNNNNNGG 2 cut(s) 1615, 2459
BseMI GCAATG 2 cut(s) 1437, 2797
BseMII CTCAG 7 cut(s) 359, 375, 528, 930, 1384, 2205, 2448
BseNI ACTGG 3 cut(s) 48, 98, 1620
BseRI GAGGAG 3 cut(s) 149, 1176, 2299
BseSI GKGCMC 1 cut(s) 1591
BseXI GCAGC 4 cut(s) 164, 293, 1802, 2379
BseYI CCCAGC 1 cut(s) 2134
BsgI GTGCAG 2 cut(s) 1127, 1251
Bsh1236I CGCG 1 cut(s) 141
BshFI GGCC 2 cut(s) 568, 1517
BshNI GGYRCC 1 cut(s) 2366
BsiHKAI GWGCWC 2 cut(s) 72, 212
BsiHKCI CYCGRG 3 cut(s) 782, 849, 1766
BsiSI CCGG 5 cut(s) 75, 431, 850, 1767, 1907
BslFI GGGAC 2 cut(s) 1218, 1783
BslI CCNNNNNNNGG 2 cut(s) 1615, 2459
BsmAI GTCTC 7 cut(s) 699, 1142, 1266, 1320, 1373, 1904, 2281
BsmBI CGTCTC 1 cut(s) 699
BsmFI GGGAC 2 cut(s) 1218, 1783
BsmI GAATGC 3 cut(s) 1544, 2425, 2629
BsnI GGCC 2 cut(s) 568, 1517
Bso31I GGTCTC 2 cut(s) 1142, 1373
BsoBI CYCGRG 3 cut(s) 782, 849, 1766
Bsp119I TTCGAA 3 cut(s) 866, 1455, 2353
Bsp1286I GDGCHC 4 cut(s) 72, 212, 1591, 1654
Bsp143I GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
BspACI CCGC 6 cut(s) 85, 908, 930, 1435, 2210, 2395
BspANI GGCC 2 cut(s) 568, 1517
BspCNI CTCAG 7 cut(s) 360, 376, 529, 931, 1383, 2206, 2447
BspFNI CGCG 1 cut(s) 141
BspHI TCATGA 1 cut(s) 1252
BspLI GGNNCC 4 cut(s) 567, 846, 2243, 2368
BspMAI CTGCAG 2 cut(s) 311, 2760
BspMI ACCTGC 1 cut(s) 1242
BspPI GGATC 2 cut(s) 839, 852
BspQI GCTCTTC 1 cut(s) 1563
BspT104I TTCGAA 3 cut(s) 866, 1455, 2353
BspT107I GGYRCC 1 cut(s) 2366
BspTI CTTAAG 1 cut(s) 2005
BspTNI GGTCTC 2 cut(s) 1142, 1373
BsrDI GCAATG 2 cut(s) 1437, 2797
BsrI ACTGG 3 cut(s) 48, 98, 1620
BssECI CCNNGG 6 cut(s) 18, 848, 849, 1679, 1766, 2051
BssMI GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
BssNI GRCGYC 1 cut(s) 340
BssSI CACGAG 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 696
Bst2UI CCWGG 4 cut(s) 20, 570, 1448, 1680
Bst4CI ACNGT 1 cut(s) 33
Bst6I CTCTTC 6 cut(s) 113, 543, 1563, 1736, 2082, 2274
BstACI GRCGYC 1 cut(s) 340
BstAFI CTTAAG 1 cut(s) 2005
BstBAI YACGTR 1 cut(s) 1315
BstBI TTCGAA 3 cut(s) 866, 1455, 2353
BstC8I GCNNGC 3 cut(s) 910, 1109, 1961
BstEII GGTNACC 1 cut(s) 925
BstFNI CGCG 1 cut(s) 141
BstHHI GCGC 4 cut(s) 141, 945, 1295, 1725
BstKTI GATC 9 cut(s) 427, 508, 640, 847, 1098, 1194, 1312, 1950, 2772
BstMAI GTCTC 7 cut(s) 699, 1142, 1266, 1320, 1373, 1904, 2281
BstMBI GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
BstMWI GCNNNNNNNGC 2 cut(s) 306, 2422
BstNI CCWGG 4 cut(s) 20, 570, 1448, 1680
BstNSI RCATGY 3 cut(s) 1211, 1791, 1963
BstPI GGTNACC 1 cut(s) 925
BstSCI CCNGG 8 cut(s) 18, 568, 848, 849, 1446, 1678, 1765, 1766
BstSFI CTRYAG 2 cut(s) 307, 2756
BstSLI GKGCMC 1 cut(s) 1591
BstUI CGCG 1 cut(s) 141
BstV1I GCAGC 4 cut(s) 164, 293, 1802, 2379
BstV2I GAAGAC 2 cut(s) 195, 2678
BstX2I RGATCY 2 cut(s) 844, 1095
BstYI RGATCY 2 cut(s) 844, 1095
BsuRI GGCC 2 cut(s) 568, 1517
BtrI CACGTC 2 cut(s) 172, 193
BtsI GCAGTG 2 cut(s) 210, 2753
BtsIMutI CAGTG 5 cut(s) 105, 210, 1378, 1613, 2753
BveI ACCTGC 1 cut(s) 1242
Cac8I GCNNGC 3 cut(s) 910, 1109, 1961
CciI TCATGA 1 cut(s) 1252
CfoI GCGC 4 cut(s) 141, 945, 1295, 1725
Cfr13I GGNCC 3 cut(s) 566, 1516, 2646
Cfr9I CCCGGG 2 cut(s) 849, 1766
Csp6I GTAC 2 cut(s) 412, 2102
CviQI GTAC 2 cut(s) 412, 2102
DpnI GATC 9 cut(s) 426, 507, 639, 846, 1097, 1193, 1311, 1949, 2771
DpnII GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
DraIII CACNNNGTG 1 cut(s) 1740
Eam1104I CTCTTC 6 cut(s) 113, 543, 1563, 1736, 2082, 2274
EarI CTCTTC 6 cut(s) 113, 543, 1563, 1736, 2082, 2274
EciI GGCGGA 1 cut(s) 74
Ecl136II GAGCTC 1 cut(s) 70
Eco24I GRGCYC 2 cut(s) 72, 1654
Eco31I GGTCTC 2 cut(s) 1142, 1373
Eco32I GATATC 1 cut(s) 1868
Eco47I GGWCC 1 cut(s) 2646
Eco53kI GAGCTC 1 cut(s) 70
Eco57I CTGAAG 1 cut(s) 735
Eco72I CACGTG 1 cut(s) 1315
Eco88I CYCGRG 3 cut(s) 782, 849, 1766
Eco91I GGTNACC 1 cut(s) 925
EcoICRI GAGCTC 1 cut(s) 70
EcoO109I RGGNCCY 1 cut(s) 566
EcoO65I GGTNACC 1 cut(s) 925
EcoRII CCWGG 4 cut(s) 18, 568, 1446, 1678
EcoRV GATATC 1 cut(s) 1868
EcoT22I ATGCAT 3 cut(s) 991, 1497, 2629
EcoT38I GRGCYC 2 cut(s) 72, 1654
Esp3I CGTCTC 1 cut(s) 699
FalI AAGNNNNNCTT 8 cut(s) 263, 295, 708, 740, 1347, 1379, 2154, 2186
FaqI GGGAC 2 cut(s) 1218, 1783
FauI CCCGC 1 cut(s) 901
FbaI TGATCA 3 cut(s) 424, 637, 1947
Fnu4HI GCNGC 5 cut(s) 178, 307, 1816, 2211, 2393
FriOI GRGCYC 2 cut(s) 72, 1654
Fsp4HI GCNGC 5 cut(s) 178, 307, 1816, 2211, 2393
FspBI CTAG 9 cut(s) 969, 1067, 1530, 1673, 1881, 1997, 2039, 2235, 2261
FspI TGCGCA 2 cut(s) 1294, 1724
GlaI GCGC 4 cut(s) 140, 944, 1294, 1724
GluI GCNGC 5 cut(s) 178, 307, 1816, 2211, 2393
GsaI CCCAGC 1 cut(s) 2138
GsuI CTGGAG 2 cut(s) 125, 2364
HaeIII GGCC 2 cut(s) 568, 1517
HapII CCGG 5 cut(s) 75, 431, 850, 1767, 1907
HhaI GCGC 4 cut(s) 141, 945, 1295, 1725
Hin1I GRCGYC 1 cut(s) 340
Hin6I GCGC 4 cut(s) 139, 943, 1293, 1723
HinP1I GCGC 4 cut(s) 139, 943, 1293, 1723
HincII GTYRAC 4 cut(s) 335, 1014, 1378, 2400
HindII GTYRAC 4 cut(s) 335, 1014, 1378, 2400
HindIII AAGCTT 4 cut(s) 255, 774, 887, 2313
HpaI GTTAAC 1 cut(s) 2400
HpaII CCGG 5 cut(s) 75, 431, 850, 1767, 1907
HphI GGTGA 3 cut(s) 64, 937, 2009
Hpy166II GTNNAC 5 cut(s) 335, 1014, 1378, 2002, 2400
Hpy188I TCNGA 7 cut(s) 510, 538, 1305, 1758, 2437, 2557, 2744
Hpy8I GTNNAC 5 cut(s) 335, 1014, 1378, 2002, 2400
Hpy99I CGWCG 2 cut(s) 342, 345
HpyAV CCTTC 9 cut(s) 265, 830, 862, 1035, 1387, 1601, 1976, 2156, 2406
HpyCH4III ACNGT 1 cut(s) 33
HpyCH4IV ACGT 5 cut(s) 171, 192, 340, 1314, 1578
HpyF10VI GCNNNNNNNGC 2 cut(s) 306, 2422
HpySE526I ACGT 5 cut(s) 171, 192, 340, 1314, 1578
Hsp92I GRCGYC 1 cut(s) 340
HspAI GCGC 4 cut(s) 139, 943, 1293, 1723
Ksp22I TGATCA 3 cut(s) 424, 637, 1947
KspAI GTTAAC 1 cut(s) 2400
Kzo9I GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
LguI GCTCTTC 1 cut(s) 1563
LmnI GCTCC 2 cut(s) 136, 962
Lsp1109I GCAGC 4 cut(s) 164, 293, 1802, 2379
MaeI CTAG 9 cut(s) 969, 1067, 1530, 1673, 1881, 1997, 2039, 2235, 2261
MaeII ACGT 5 cut(s) 171, 192, 340, 1314, 1578
MaeIII GTNAC 6 cut(s) 925, 993, 1350, 1525, 1622, 2203
MalI GATC 9 cut(s) 426, 507, 639, 846, 1097, 1193, 1311, 1949, 2771
MboI GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
MfeI CAATTG 1 cut(s) 1954
MflI RGATCY 2 cut(s) 844, 1095
MhlI GDGCHC 4 cut(s) 72, 212, 1591, 1654
MlyI GAGTC 4 cut(s) 397, 1819, 2453, 2699
MmeI TCCRAC 4 cut(s) 135, 177, 810, 1875
Mph1103I ATGCAT 3 cut(s) 991, 1497, 2629
MroXI GAANNNNTTC 4 cut(s) 257, 720, 723, 2542
MslI CAYNNNNRTG 3 cut(s) 984, 1273, 2723
MspCI CTTAAG 1 cut(s) 2005
MspI CCGG 5 cut(s) 75, 431, 850, 1767, 1907
MspR9I CCNGG 8 cut(s) 20, 570, 850, 851, 1448, 1680, 1767, 1768
MunI CAATTG 1 cut(s) 1954
Mva1269I GAATGC 3 cut(s) 1544, 2425, 2629
MvaI CCWGG 4 cut(s) 20, 570, 1448, 1680
MvnI CGCG 1 cut(s) 141
MwoI GCNNNNNNNGC 2 cut(s) 306, 2422
NciI CCSGG 4 cut(s) 850, 851, 1767, 1768
NdeII GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
NlaIV GGNNCC 4 cut(s) 567, 846, 2243, 2368
NmeAIII GCCGAG 2 cut(s) 265, 2076
NmuCI GTSAC 5 cut(s) 925, 993, 1350, 1525, 2203
NsbI TGCGCA 2 cut(s) 1294, 1724
NsiI ATGCAT 3 cut(s) 991, 1497, 2629
NspI RCATGY 3 cut(s) 1211, 1791, 1963
NspV TTCGAA 3 cut(s) 866, 1455, 2353
PacI TTAATTAA 1 cut(s) 1338
PaeI GCATGC 1 cut(s) 1963
PaeR7I CTCGAG 1 cut(s) 782
PagI TCATGA 1 cut(s) 1252
PciI ACATGT 1 cut(s) 1787
PciSI GCTCTTC 1 cut(s) 1563
PcsI WCGNNNNNNNCGW 2 cut(s) 177, 2359
PctI GAATGC 3 cut(s) 1544, 2425, 2629
PdmI GAANNNNTTC 4 cut(s) 257, 720, 723, 2542
PfeI GAWTC 9 cut(s) 78, 976, 1001, 1172, 2257, 2339, 2350, 2480, 2543
PflMI CCANNNNNTGG 1 cut(s) 1615
PfoI TCCNGGA 1 cut(s) 1446
PkrI GCNGC 5 cut(s) 179, 308, 1817, 2212, 2394
PleI GAGTC 4 cut(s) 396, 1818, 2452, 2699
PmaCI CACGTG 1 cut(s) 1315
PmlI CACGTG 1 cut(s) 1315
PpsI GAGTC 4 cut(s) 396, 1818, 2452, 2699
Ppu21I YACGTR 1 cut(s) 1315
PscI ACATGT 1 cut(s) 1787
PshBI ATTAAT 1 cut(s) 2859
PsiI TTATAA 1 cut(s) 1467
Psp124BI GAGCTC 1 cut(s) 72
Psp6I CCWGG 4 cut(s) 18, 568, 1446, 1678
PspCI CACGTG 1 cut(s) 1315
PspEI GGTNACC 1 cut(s) 925
PspFI CCCAGC 1 cut(s) 2134
PspGI CCWGG 4 cut(s) 18, 568, 1446, 1678
PspN4I GGNNCC 4 cut(s) 567, 846, 2243, 2368
PspPI GGNCC 3 cut(s) 566, 1516, 2646
PstI CTGCAG 2 cut(s) 311, 2760
PsuI RGATCY 2 cut(s) 844, 1095
RsaI GTAC 2 cut(s) 413, 2103
RsaNI GTAC 2 cut(s) 412, 2102
RseI CAYNNNNRTG 3 cut(s) 984, 1273, 2723
SacI GAGCTC 1 cut(s) 72
SapI GCTCTTC 1 cut(s) 1563
SatI GCNGC 5 cut(s) 178, 307, 1816, 2211, 2393
Sau3AI GATC 9 cut(s) 424, 505, 637, 844, 1095, 1191, 1309, 1947, 2769
Sau96I GGNCC 3 cut(s) 566, 1516, 2646
SchI GAGTC 4 cut(s) 397, 1819, 2453, 2699
ScrFI CCNGG 8 cut(s) 20, 570, 850, 851, 1448, 1680, 1767, 1768
SduI GDGCHC 4 cut(s) 72, 212, 1591, 1654
SfcI CTRYAG 2 cut(s) 307, 2756
Sfr274I CTCGAG 1 cut(s) 782
SfuI TTCGAA 3 cut(s) 866, 1455, 2353
SinI GGWCC 1 cut(s) 2646
SlaI CTCGAG 1 cut(s) 782
SmaI CCCGGG 2 cut(s) 851, 1768
SmiMI CAYNNNNRTG 3 cut(s) 984, 1273, 2723
SmlI CTYRAG 2 cut(s) 782, 2005
SmoI CTYRAG 2 cut(s) 782, 2005
SpeI ACTAGT 1 cut(s) 1996
SphI GCATGC 1 cut(s) 1963
SsiI CCGC 6 cut(s) 85, 908, 930, 1435, 2210, 2395
SspI AATATT 3 cut(s) 1477, 1902, 2863
SspMI CTAG 9 cut(s) 969, 1067, 1530, 1673, 1881, 1997, 2039, 2235, 2261
SstI GAGCTC 1 cut(s) 72
StyD4I CCNGG 8 cut(s) 18, 568, 848, 849, 1446, 1678, 1765, 1766
TaaI ACNGT 1 cut(s) 33
TaiI ACGT 5 cut(s) 174, 195, 343, 1317, 1581
TaqII GACCGA 1 cut(s) 320
TatI WGTACW 1 cut(s) 411
TauI GCSGC 1 cut(s) 2213
TfiI GAWTC 9 cut(s) 78, 976, 1001, 1172, 2257, 2339, 2350, 2480, 2543
TscAI CASTG 5 cut(s) 105, 217, 1378, 1620, 2760
TseFI GTSAC 5 cut(s) 925, 993, 1350, 1525, 2203
TseI GCWGC 4 cut(s) 177, 306, 1815, 2392
Tsp45I GTSAC 5 cut(s) 925, 993, 1350, 1525, 2203
TspGWI ACGGA 1 cut(s) 63
TspMI CCCGGG 2 cut(s) 849, 1766
TspRI CASTG 5 cut(s) 105, 217, 1378, 1620, 2760
Van91I CCANNNNNTGG 1 cut(s) 1615
Vha464I CTTAAG 1 cut(s) 2005
VpaK11BI GGWCC 1 cut(s) 2646
VspI ATTAAT 1 cut(s) 2859
XbaI TCTAGA 2 cut(s) 2038, 2260
XceI RCATGY 3 cut(s) 1211, 1791, 1963
XcmI CCANNNNNNNNNTGG 2 cut(s) 223, 589
XhoI CTCGAG 1 cut(s) 782
XmaI CCCGGG 2 cut(s) 849, 1766
XmnI GAANNNNTTC 4 cut(s) 257, 720, 723, 2542
XspI CTAG 9 cut(s) 969, 1067, 1530, 1673, 1881, 1997, 2039, 2235, 2261
ZraI GACGTC 1 cut(s) 341
Zsp2I ATGCAT 3 cut(s) 991, 1497, 2629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.